RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZKSCAN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000196652

Ensembl transcript IDs: ENST00000326775.10, ENST00000394170.6, ENST00000451158.5, ENST00000454175.1

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACCCCAACCTTCCTGGAAGGCAGGGCTAACAGGACCTCCTGCCTaGCTGCTCACGACTGATTACTTTCAATCCCAGCTGCAATGCAAA +
Preference number: 1 (lower is better)
Translates to: PPQPSWKAGLTGPPA*LLTTDYFQSQLQCK
Trigger: TTTGCATTGCAGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCCTGCCTTCCAGGAAGGTTGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR CCA 90 bp CACATGCCAGGACTATTAACAGTGATGCGGGTCTTCACTCCCTCCTaGCGAGTGACCAACTCCACAATCCACTCTCACAGCAGCTTCCTA +
Preference number: 1 (lower is better)
Translates to: HMPGLLTVMRVFTPS*RVTNSTIHSHSSFL
Trigger: TAGGAAGCTGCTGTGAGAGTGGATTGTGGAGTTGGTCACTCGCCAGGAGGGAGTGAAGACCCGCATCACTGTTAATAGTCCTGGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR CCA 90 bp CCACCTTTGTACCATGCCTTTAAGGTCACTGACTTCTGCAAAGTCTaGATCCTGAGGAACGCTCCTTTCGGTGTGTTCTGGCGCCACCCA +
Preference number: 1 (lower is better)
Translates to: PPLYHAFKVTDFCKV*ILRNAPFGVFWRHP
Trigger: TGGGTGGCGCCAGAACACACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTTAAAGGCATGGTACAAAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR TCA 90 bp TGTACCATGCCTTTAAGGTCACTGACTTCTGCAAAGTCTGGATCCTaGGGAACGCTCCTTTCGGTGTGTTCTGGCGCCACCCAGTGTGAT +
Preference number: 1 (lower is better)
Translates to: CTMPLRSLTSAKSGS*GTLLSVCSGATQCD
Trigger: ATCACACTGGGTGGCGCCAGAACACACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTTAAAGGCATGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR GCA 90 bp TTGCCACAATCGCTGCATCTGTGCCCTCTCTCGCCATGTGTGCTTTaGTTAGGGCTGATGTCTGTGATTGCATCCAGATCCCTTTTCTGG +
Preference number: 1 (lower is better)
Translates to: LPQSLHLCPLSPCVL*LGLMSVIASRSLFW
Trigger: CCAGAAAAGGGATCTGGATGCAATCACAGACATCAGCCCTAAGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGATTGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR TCA 90 bp CTGGAAGGCAGGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTaGTTACTTTCAATCCCAGCTGCAATGCAAACTGAAACTCATTCT +
Preference number: 1 (lower is better)
Translates to: LEGRANRTSCLPAHD*LLSIPAAMQTETHS
Trigger: AGAATGAGTTTCAGTTTGCATTGCAGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCCTGCCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 90 bp TTATTGGGCATTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTaGGCAGTGCCCAAGAGCACTCACTCACTCTCCCTAGCAAACAGG +
Preference number: 1 (lower is better)
Translates to: LLGIYCKPGKSAETA*AVPKSTHSLSLANR
Trigger: CCTGTTTGCTAGGGAGAGTGAGTGAGTGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAATGCCCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR GCA 90 bp TTCTGGGAAGGATTCTGCCTTGATTTCCCCACAGTGGGGTTGACCTaGCACCTTTGTACCATGCCTTTAAGGTCACTGACTTCTGCAAAG +
Preference number: 1 (lower is better)
Translates to: FWEGFCLDFPTVGLT*HLCTMPLRSLTSAK
Trigger: CTTTGCAGAAGTCAGTGACCTTAAAGGCATGGTACAAAGGTGGCAGGTCAACCCCACTGTGGGGAAATCAAGGCAGAATCCTTCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CCA 90 bp GAAACTCATTCTGTATATCACCACTCTACAGGAGAGGTCTATTTCTaGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTC +
Preference number: 1 (lower is better)
Translates to: ETHSVYHHSTGEVYF*GTQKSAHILLGPGL
Trigger: GAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAATAGACCTCTCCTGTAGAGTGGTGATATACAGAATGAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR GCA 90 bp CCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGCTGCAATaGAAACTGAAACTCATTCTGTATATCACCACTCTACAGGAGAGG +
Preference number: 1 (lower is better)
Translates to: PACLLTTDYFQSQLQ*KLKLILYITTLQER
Trigger: CCTCTCCTGTAGAGTGGTGATATACAGAATGAGTTTCAGTTTGCATTGCAGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR CCA 90 bp TTCTTACTTCTTTTGTCACTGCATCTCTGGGATTTCTCCCTGAAGTaGCGTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTC +
Preference number: 1 (lower is better)
Translates to: FLLLLSLHLWDFSLK*RFRCSIRCEWRPKF
Trigger: GAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAACGCCACTTCAGGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CCA 90 bp AGAGACCCCTCTACACTTAAGGTATTTATGGGATCTGTCCTCTCATaGCTTCTCAGGTGTTTAAAGAGGCTACAACTCCAGCTGAAATTC +
Preference number: 1 (lower is better)
Translates to: RDPSTLKVFMGSVLS*LLRCLKRLQLQLKF
Trigger: GAATTTCAGCTGGAGTTGTAGCCTCTTTAAACACCTGAGAAGCCATGAGAGGACAGATCCCATAAATACCTTAAGTGTAGAGGGGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR TCA 90 bp GCCTGCTCACGACTGATTACTTTCAATCCCAGCTGCAATGCAAACTaGAACTCATTCTGTATATCACCACTCTACAGGAGAGGTCTATTT +
Preference number: 1 (lower is better)
Translates to: ACSRLITFNPSCNAN*NSFCISPLYRRGLF
Trigger: AAATAGACCTCTCCTGTAGAGTGGTGATATACAGAATGAGTTTCAGTTTGCATTGCAGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR GCA 90 bp GTCCTAGTATCTCTTTCATGGGAATTCCCTGCTTTCTATCCAGCTTaGCTTGAAACTCACAGCCTTCTCCAAAATCTTGAACTTGAGAAA +
Preference number: 1 (lower is better)
Translates to: VLVSLSWEFPAFYPA*LETHSLLQNLELEK
Trigger: TTTCTCAAGTTCAAGATTTTGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGCAGGGAATTCCCATGAAAGAGATACTAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CCA 90 bp AAGCTACCAAGAAGGTCCTCTGACACACACTTGGCATTAAATTGGTaGTTATTTGCCCTGTCATTTTCTTCTCTTCAAGGATTCAGTGAC +
Preference number: 1 (lower is better)
Translates to: KLPRRSSDTHLALNW*LFALSFSSLQGFSD
Trigger: GTCACTGAATCCTTGAAGAGAAGAAAATGACAGGGCAAATAACCACCAATTTAATGCCAAGTGTGTGTCAGAGGACCTTCTTGGTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR TCA 90 bp CAAAACAGACATCATGCTAAGGAATTCTTTTACTGTGCGCTTCCCTaGATAGATACGCCGTCAAACAAGGCAGAAGCTACAAATAAAGCT +
Preference number: 1 (lower is better)
Translates to: QNRHHAKEFFYCALP*IDTPSNKAEATNKA
Trigger: AGCTTTATTTGTAGCTTCTGCCTTGTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTAAAAGAATTCCTTAGCATGATGTCTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 90 bp CGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTaGGTTATAACTAAAGGATTTCAACCTATTTGTGAGTTTGATGGT +
Preference number: 1 (lower is better)
Translates to: RKDFYYCGFSGVPKG*VITKGFQPICEFDG
Trigger: ACCATCAAACTCACAAATAGGTTGAAATCCTTTAGTTATAACTCAGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR CCA 90 bp GCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTTTCTCTAAAATTAAGAGCTATTCTA +
Preference number: 1 (lower is better)
Translates to: AGKMLEVVTLLIIGV*FPSRKVSLKLRAIL
Trigger: TAGAATAGCTCTTAATTTTAGAGAAACCTTCCTGGAGGGAAACCATACTCCTATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGGGTGTAGAGAGGAAGTaGCTCCTGGGTGAGGTGAGA +
Preference number: 2 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQGVERK*LLGEVR
Trigger: TCTCACCTCACCCAGGAGTCACTTCCTCTCTACACC...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGAAACGGCCTGAGCAGTaGCCAAGAGCACTCACTCAC +
Preference number: 2 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQKRPEQ*PRALTH
Trigger: GTGAGTGAGTGCTCTTGGGCACTGCTCAGGCCGTTT...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGCAAACTCAGAGCAGCTaGGGATGGGGGTCTCAGCTT +
Preference number: 2 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQQTQSS*GWGSQL
Trigger: AAGCTGAGACCCCCATCCCCAGCTGCTCTGAGTTTG...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGACAGTGGGGTTGACCTaGCACCTTTGTACCATGCCT +
Preference number: 2 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQTVGLT*HLCTMP
Trigger: AGGCATGGTACAAAGGTGGCAGGTCAACCCCACTGT...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CCA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCAGATGTCCAGCCAGGTaGGAACGCCTCCCAAAGCCT +
Preference number: 2 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHARCPAR*ERLPKP
Trigger: AGGCTTTGGGAGGCGTTCCCACCTGGCTGGACATCT...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCCTGCCTGCTCACGACTaGTTACTTTCAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSLPAHD*LLSIPA
Trigger: AGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAG...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp GAAGAATTTGCCACAATCGCTGCATCTGTGCCCTCTCTCGCCATGTGTGCTTTGGCAAAGTCTGGATCCTaGGGAACGCTCCTTTCGGTG +
Preference number: 2 (lower is better)
Translates to: EEFATIAASVPSLAMCALAKSGS*GTLLSV
Trigger: CACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGC...CAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAATTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCTGGACACTGTGGTGCTaGACCAGGTGGGAACTCACC +
Preference number: 2 (lower is better)
Translates to: ETPLREGMKQDREGRELSWTLWC*TRWELT
Trigger: GGTGAGTTCCCACCTGGTTCAGCACCACAGTGTCCA...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp TCCCAGCTATTCAGGAGGCTGAGGTGGCTAGACCACTTGAGCCCGGGAGGTCAAAGACTGAATGTCAACTaGAGGCTTTCCGAATTCCTC +
Preference number: 2 (lower is better)
Translates to: SQLFRRLRWLDHLSPGGQRLNVN*RLSEFL
Trigger: GAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCT...TTGACCTCCCGGGCTCAAGTGGTCTAGCCACCTCAGCCTCCTGAATAGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR TCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGTCTTCAAGGATTCAGTaGCTTTCAGCAAGAGCCACC +
Preference number: 2 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQSSRIQ*LSARAT
Trigger: GGTGGCTCTTGCTGAAAGTCACTGAATCCTTGAAGA...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR TCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCCGCGCTGGTGCTGGGTaGGGTGCACCCGCTGATTGT +
Preference number: 2 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLRAGAG*GAPADC
Trigger: ACAATCAGCGGGTGCACCTCACCCAGCACCAGCGCG...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGACAGGACCTCCTGCCTaGCTGCTCACGACTGATTAC +
Preference number: 2 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSETGPPA*LLTTDY
Trigger: GTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGT...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CCA 90 bp TTTGCCACAATCGCTGCATCTGTGCCCTCTCTCGCCATGTGTGCTTTGCTTAGGGACTTCTGCAAAGTCTaGATCCTGAGGAACGCTCCT +
Preference number: 2 (lower is better)
Translates to: FATIAASVPSLAMCALLRDFCKV*ILRNAP
Trigger: AGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTC...CCTAAGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CCA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTGATTTCTCTCGGGAGTaGAGTCGAAGATGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFDFSRE*SRRCPA
Trigger: GGCTGGACATCTTCGACTCCACTCCCGAGAGAAATC...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CAA 90 bp TTTGCCACAATCGCTGCATCTGTGCCCTCTCTCGCCATGTGTGCTTaGCTTAGGGCTGATGTCTGTGATTGCATCCAGATCCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: FATIAASVPSLAMCA*LRADVCDCIQIPFL
Trigger: CAGAAAAGGGATCTGGATGCAATCACAGACATCAGCCCTAAGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGAGAGAAGTGGTGGATTaGATAAGGCAGCAGAAACAC +
Preference number: 2 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQREVVD*IRQQKH
Trigger: GTGTTTCTGCTGCCTTATTCAATCCACCACTTCTCT...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCCTGCCTGCTCACGACTaGTTACTTTCAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHALPAHD*LLSIPA
Trigger: AGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAG...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR TCA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCACTGCCTGCTCACGACTaGTTACTTTCAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: FIVSQASQQKRPEQCPRALPAHD*LLSIPA
Trigger: AGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAG...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTTGGCGCCACCCAGTGTaGTTCAGAGTCATCAGAAAT +
Preference number: 2 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFWRHPV*FRVIRN
Trigger: ATTTCTGATGACTCTGAATCACACTGGGTGGCGCCA...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCAGAGCTGTGAGCACTTaGAGCCCAAACTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: ETPLREGMKQDREGRELSRAVST*SPNSEQ
Trigger: CTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCT...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CCA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCATTAGCCACTCATGGTaGCATGTGCCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHAISHSW*HVPVVP
Trigger: TGGGACTACAGGCACATGCCACCATGAGTGGCTAAT...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR TCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACCTATCCAGCTTGCCTTaGAACTCACAGCCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SHLLRAILQFLENKSCEHLSSLP*NSQPSP
Trigger: TGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAG...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCAGGTGTTCGATCAGATaGGAATGGCGACCGAAGTTC +
Preference number: 2 (lower is better)
Translates to: ETPLREGMKQDREGRELSRCSIR*EWRPKF
Trigger: GAACTTCGGTCGCCATTCGCATCTGATCGAACACCT...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGTCGATCAGATGCGAATaGCGACCGAAGTTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSESIRCE*RPKFFP
Trigger: TGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGA...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp GTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCCCACACTCATTACTGTGCGCTTCCCTaGATAGATACGCCGTCAAAC +
Preference number: 2 (lower is better)
Translates to: VLGVRSDANGDRSSSHTHYCALP*IDTPSN
Trigger: GTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTA...ATGAGTGTGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCATCAGCAGAAACGGCCTaGGCAGTGCCCAAGAGCACT +
Preference number: 2 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWASAETA*AVPKST
Trigger: AGTGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGA...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCTCTGGGATTTCTCCCTaGAGTGGCGTTTTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: ETPLREGMKQDREGRELSSGISP*SGVLGV
Trigger: AACACCTAAAACGCCACTTCAGGGAGAAATCCCAGA...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAACAGGACCTCCTGCCTaGCTGCTCACGACTGATTAC +
Preference number: 2 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKTGPPA*LLTTDY
Trigger: GTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGT...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTTCGCCATGTGTGCTTTaGTTAGGGCTGATGTCTGTG +
Preference number: 2 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSSPCVL*LGLMSV
Trigger: CACAGACATCAGCCCTAAGCAAAGCACACATGGCGA...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATAAAGCTTACTTCTACTaGACTCATGAAGCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNKAYFY*THEAVP
Trigger: AGGAACAGCTTCATGAGTTCAGTAGAAGTAAGCTTT...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGAGAGAAGTGGTGGATTaGATAAGGCAGCAGAAACAC +
Preference number: 2 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSEREVVD*IRQQKH
Trigger: GTGTTTCTGCTGCCTTATTCAATCCACCACTTCTCT...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCAGACTGAATGTCAACTaGAGGCTTTCCGAATTCCTC +
Preference number: 2 (lower is better)
Translates to: ETPLREGMKQDREGRELSRLNVN*RLSEFL
Trigger: GAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCT...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGGCTTTCTATCCAGCTTaGCTTGAAACTCACAGCCTT +
Preference number: 2 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSEAFYPA*LETHSL
Trigger: AAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGC...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCGATTTCTCCCTGAAGTaGCGTTTTAGGTGTTCGATC +
Preference number: 2 (lower is better)
Translates to: ETPLREGMKQDREGRELSDFSLK*RFRCSI
Trigger: GATCGAACACCTAAAACGCCACTTCAGGGAGAAATC...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTCGCTGGAAAAATGCTTaGAGTTGTTACTTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFRWKNA*SCYFAH
Trigger: ATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCG...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTTTTGCCTGTCTTCTCTaGTCCCCTAAGGTCCCTCTC +
Preference number: 2 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIFACLL*SPKVPL
Trigger: GAGAGGGACCTTAGGGGAGCAGAGAAGACAGGCAAA...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAGAGCTGTGAGCACTTaGAGCCCAAACTCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIRAVST*SPNSEQ
Trigger: CTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCGACCATGTCCATCCATaGATTCTCTTCTTGTCTAGA +
Preference number: 2 (lower is better)
Translates to: ETPLREGMKQDREGRELSDHVHP*ILFLSR
Trigger: TCTAGACAAGAAGAGAATCCATGGATGGACATGGTC...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTGGTGTTCCTAAAGGCTaGGTTATAACTAAAGGATTT +
Preference number: 2 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGGVPKG*VITKGF
Trigger: AAATCCTTTAGTTATAACTCAGCCTTTAGGAACACC...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGTTTCAAGTGAAGACTaGATGTCAACTGCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSVSSED*MSTAGF
Trigger: AAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAAC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR TCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCATACTGTGCGCTTCCCTaGATAGATACGCCGTCAAAC +
Preference number: 2 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAYCALP*IDTPSN
Trigger: GTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTA...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGATTAGGCTAACGTACTaGAAAAAGATTTCCCCACAT +
Preference number: 2 (lower is better)
Translates to: GSHLLRAILQFLENKSCEIRLTY*KKISPH
Trigger: ATGTGGGGAAATCTTTTTTCAGTACGTTAGCCTAAT...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR TCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTTCAGAACCATGTGATTaGCAGTGTGATTTATTTGGG +
Preference number: 2 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSSEPCD*QCDLFG
Trigger: CCCAAATAAATCACACTGTCAATCACATGGTTCTGA...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR TCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTATGTTGATTAAGATGTaGCTTCAGAGTGAAGCCTCT +
Preference number: 2 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSMLIKM*LQSEAS
Trigger: AGAGGCTTCACTCTGAAGTCACATCTTAATCAACAT...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCAAGGTCACTGACTTCTaGAAAGTCTGGATCCTGAGG +
Preference number: 2 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLKVTDF*KVWILR
Trigger: CCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTT...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTTTCTGGGAAGGATTCTaGCTTGATTTCCCCACAGTG +
Preference number: 2 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPFWEGF*LDFPTV
Trigger: CACTGTGGGGAAATCAAGGCAGAATCCTTCCCAGAA...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR GCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAATACTTCTTTTGTCACTaGATCTCTGGGATTTCTCCC +
Preference number: 2 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKYFFCH*ISGISP
Trigger: GGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTA...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAGACCATGTCCATCCATaGATTCTCTTCTTGTCTAGA +
Preference number: 2 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKDHVHP*ILFLSR
Trigger: TCTAGACAAGAAGAGAATCCATGGATGGACATGGTC...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAACTGCCCTCATTCCTGTaGGTAATACAAGATCAAACA +
Preference number: 2 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKLPSFL*VIQDQT
Trigger: TGTTTGATCTTGTATTACCCACAGGAATGAGGGCAG...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR CAA 90 bp AGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTaGTCTAGATTTCCAAGCATGAAGATGCTAACTAAAGCATTTCTC +
Preference number: 2 (lower is better)
Translates to: RLSEFLDHVHPWILF*SRFPSMKMLTKAFL
Trigger: GAGAAATGCTTTAGTTAGCATCTTCATGCTTGGAAATCTAGACAAGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR TCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAACGCTGGAAAAATGCTTaGAGTTGTTACTTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKRWKNA*SCYFAH
Trigger: ATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCG...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAGTTTCAAGTGAAGACTaGATGTCAACTGCAGGCTTT +
Preference number: 2 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAVSSED*MSTAGF
Trigger: AAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAAC...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR TCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAAAAGCTTACTTCTACTaGACTCATGAAGCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKKAYFY*THEAVP
Trigger: AGGAACAGCTTCATGAGTTCAGTAGAAGTAAGCTTT...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR GCA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGAAATTGGTGGTTATTTaGCCTGTCATTTTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: PWSFLRFNQMNQVLGCREKLVVI*PVIFFS
Trigger: AGAGAAGAAAATGACAGGGCAAATAACCACCAATTT...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR GCA 90 bp TTCTTGTCTTCAATCACTGTCAAGTTCCAACTATATGCTTCCTCACAGATGCCAGCTGATGTCTGTGATTaGATCCAGATCCCTTTTCTG +
Preference number: 2 (lower is better)
Translates to: FLSSITVKFQLYASSQMPADVCD*IQIPFL
Trigger: CAGAAAAGGGATCTGGATGCAATCACAGACATCAGC...TGGCATCTGTGAGGAAGCATATAGTTGGAACTTGACAGTGATTGAAGACAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGACTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRLIIGV*FPSRKV
Trigger: AACCTTCCTGGAGGGAAACCATACTCCTATAATGAG...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR CCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCCTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLLIIGV*FPSRKV
Trigger: AACCTTCCTGGAGGGAAACCATACTCCTATAATGAG...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCGACCATGTCCATCCATaGATTCTCTTCTTGTCTAGA +
Preference number: 2 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFDHVHP*ILFLSR
Trigger: TCTAGACAAGAAGAGAATCCATGGATGGACATGGTC...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR TCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCGGTGTTCCTAAAGGCTaGGTTATAACTAAAGGATTT +
Preference number: 2 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFGVPKG*VITKGF
Trigger: AAATCCTTTAGTTATAACTCAGCCTTTAGGAACACC...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR TCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGCTGGAAAAATGCTTaGAGTTGTTACTTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLRWKNA*SCYFAH
Trigger: ATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCG...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR CAA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCGATGGGGGTCTCAGCTaGGTAGAGGGGACTGGACAG +
Preference number: 3 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSDGGLS*VEGTGQ
Trigger: CTGTCCAGTCCCCTCTACCAAGCTGAGACCCCCATC...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR GCA 72 bp CCTTCCTGGAAGGCAGGGCTAACAGGACCTCCTGCCTaGCTGCTCACGACTGATTACTTTCAATCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: PSWKAGLTGPPA*LLTTDYFQSQL
Trigger: CAGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCCTGCCTTCCAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 72 bp GCACGGATGAAGGCTCAGAAAAAGTCTAGCTTGGCCTaGTCCAAGGGTGCCAGAGCAGTCATAGCACCCTGG +
Preference number: 3 (lower is better)
Translates to: ARMKAQKKSSLA*SKGARAVIAPW
Trigger: CCAGGGTGCTATGACTGCTCTGGCACCCTTGGATCAGGCCAAGCTAGACTTTTTCTGAGCCTTCATCCGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 72 bp CCTTTAAGGTCACTGACTTCTGCAAAGTCTGGATCCTaGGGAACGCTCCTTTCGGTGTGTTCTGGCGCCACC +
Preference number: 3 (lower is better)
Translates to: PLRSLTSAKSGS*GTLLSVCSGAT
Trigger: GGTGGCGCCAGAACACACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTTAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR GCA 72 bp TCGCTGCATCTGTGCCCTCTCTCGCCATGTGTGCTTTaGTTAGGGCTGATGTCTGTGATTGCATCCAGATCC +
Preference number: 3 (lower is better)
Translates to: SLHLCPLSPCVL*LGLMSVIASRS
Trigger: GGATCTGGATGCAATCACAGACATCAGCCCTAAGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CCA 72 bp GGACTATTAACAGTGATGCGGGTCTTCACTCCCTCCTaGCGAGTGACCAACTCCACAATCCACTCTCACAGC +
Preference number: 3 (lower is better)
Translates to: GLLTVMRVFTPS*RVTNSTIHSHS
Trigger: GCTGTGAGAGTGGATTGTGGAGTTGGTCACTCGCCAGGAGGGAGTGAAGACCCGCATCACTGTTAATAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR GCA 72 bp TTTTTAGACACTGTCGCTCTGTCAACTGGGCTAGAGTaGAGTGGCGTGATCTCAGCTCACTGCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: FLDTVALSTGLE*SGVISAHCNLC
Trigger: GCAGAGGTTGCAGTGAGCTGAGATCACGCCACTGCACTCTAGCCCAGTTGACAGAGCGACAGTGTCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR CAA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCATTTGGGAAACGCCTTaGAGGGAGGGAATGAAACAG +
Preference number: 3 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSIWETP*REGMKQ
Trigger: CTGTTTCATTCCCTCCCTCAAAGGCGTTTCCCAAAT...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGATTTGGGAAACGCCTTaGAGGGAGGGAATGAAACAG +
Preference number: 3 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQIWETP*REGMKQ
Trigger: CTGTTTCATTCCCTCCCTCAAAGGCGTTTCCCAAAT...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp TCCCAGCTATTCAGGAGGCTGAGGTGGCTAGACCACTTGAGCCCGGGAGGTCAATCCTCTGACACACACTaGGCATTAAATTGGTGGTTA +
Preference number: 3 (lower is better)
Translates to: SQLFRRLRWLDHLSPGGQSSDTH*ALNWWL
Trigger: TAACCACCAATTTAATGCCAAGTGTGTGTCAGAGGA...TTGACCTCCCGGGCTCAAGTGGTCTAGCCACCTCAGCCTCCTGAATAGCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR CAA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCGTTGACCTGCCACCTTaGTACCATGCCTTTAAGGTC +
Preference number: 3 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHAVDLPP*YHAFKV
Trigger: GACCTTAAAGGCATGGTACAAAGGTGGCAGGTCAAC...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTGCTTGGAGGAAGAATTaGCCACAATCGCTGCATCTG +
Preference number: 3 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFAWRKN*PQSLHL
Trigger: CAGATGCAGCGATTGTGGCAAATTCTTCCTCCAAGC...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR TCA 72 bp GCTCCCCTAAGGTCCCTCTCCCTTCGCCGTAAGATGTaGCTGACCAGTACAGTTTCTCCTGAATTGACAAAC +
Preference number: 3 (lower is better)
Translates to: APLRSLSLRRKM*LTSTVSPELTN
Trigger: GTTTGTCAATTCAGGAGAAACTGTACTGGTCAGTCACATCTTACGGCGAAGGGAGAGGGACCTTAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 72 bp AGGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTaGTTACTTTCAATCCCAGCTGCAATGCAAACTGAA +
Preference number: 3 (lower is better)
Translates to: RANRTSCLPAHD*LLSIPAAMQTE
Trigger: TTCAGTTTGCATTGCAGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 72 bp ATTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTaGGCAGTGCCCAAGAGCACTCACTCACTCTCCCTA +
Preference number: 3 (lower is better)
Translates to: IYCKPGKSAETA*AVPKSTHSLSL
Trigger: TAGGGAGAGTGAGTGAGTGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR GCA 72 bp AGTTTGAGGCTTGGAGGAAGAATTTGCCACAATCGCTaGATCTGTGCCCTCTCTCGCCATGTGTGCTTTGCT +
Preference number: 3 (lower is better)
Translates to: SLRLGGRICHNR*ICALSRHVCFA
Trigger: AGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAATTCTTCCTCCAAGCCTCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCACACTTGGCATTAAATaGGTGGTTATTTGCCCTGTC +
Preference number: 3 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSTLGIK*VVICPV
Trigger: GACAGGGCAAATAACCACCAATTTAATGCCAAGTGT...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR GCA 72 bp CCACCTTTGTACCATGCCTTTAAGGTCACTGACTTCTaGAAAGTCTGGATCCTGAGGAACGCTCCTTTCGGT +
Preference number: 3 (lower is better)
Translates to: PPLYHAFKVTDF*KVWILRNAPFG
Trigger: ACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTTAAAGGCATGGTACAAAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CCA 72 bp TCTGTATATCACCACTCTACAGGAGAGGTCTATTTCTaGGGCACCCAGAAGTCAGCACACATACTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: SVYHHSTGEVYF*GTQKSAHILLG
Trigger: TCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAATAGACCTCTCCTGTAGAGTGGTGATATACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTCAGAGAAGTGGTGGATaGAATAAGGCAGCAGAAACA +
Preference number: 3 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGQRSGG*NKAAET
Trigger: TGTTTCTGCTGCCTTATTCAATCCACCACTTCTCTG...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCAAATGAACCAGGTGTaGGGGTGTAGAGAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSQMNQV*GCREEV
Trigger: CACTTCCTCTCTACACCCCAACACCTGGTTCATTTG...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGCAAATGAACCAGGTGTaGGGGTGTAGAGAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: PWSFLRFNQMNQVLGCREQMNQV*GCREEV
Trigger: CACTTCCTCTCTACACCCCAACACCTGGTTCATTTG...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATGTGTTCTTACTTCTTTaGTCACTGCATCTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNVFLLL*SLHLWD
Trigger: ATCCCAGAGATGCAGTGACAAAAGAAGTAAGAACAC...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTGCCACATTCATGACATaGATGGGATTTTGTGCTGGA +
Preference number: 3 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFATFMT*MGFCAG
Trigger: TCCAGCACAAAATCCCATCAATGTCATGAATGTGGC...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGGGAAGGATTCTGCCTaGATTTCCCCACAGTGGGGT +
Preference number: 3 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLGKDSA*ISPQWG
Trigger: ACCCCACTGTGGGGAAATCAAGGCAGAATCCTTCCC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: GSHLLRAILQFLENKSCEKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTCTAGAAAAGGTTCATaGCTGAGGTACCAAAACAGA +
Preference number: 3 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGSRKGS*LRYQNR
Trigger: TCTGTTTTGGTACCTCAGCAATGAACCTTTTCTAGA...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTCTCGCCATGTGTGCTTaGCTTAGGGCTGATGTCTGT +
Preference number: 3 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFILAMCA*LRADVC
Trigger: ACAGACATCAGCCCTAAGCAAAGCACACATGGCGAG...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: SHLLRAILQFLENKSCEHKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 72 bp AAACAAGGTAGAGTGTTTCACAGAGAAGTGGTGGATTaGATAAGGCAGCAGAAACACATACCATCCAGCCCC +
Preference number: 3 (lower is better)
Translates to: KQGRVFHREVVD*IRQQKHIPSSP
Trigger: GGGGCTGGATGGTATGTGTTTCTGCTGCCTTATTCAATCCACCACTTCTCTGTGAAACACTCTACCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGACGCTGGAAAAATGCTaGAAGTTGTTACTTTGCTCA +
Preference number: 3 (lower is better)
Translates to: PWSFLRFNQMNQVLGCRETLEKC*KLLLCS
Trigger: TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGT...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 72 bp CATCATGCTAAGGAATTCTTTTACTGTGCGCTTCCCTaGATAGATACGCCGTCAAACAAGGCAGAAGCTACA +
Preference number: 3 (lower is better)
Translates to: HHAKEFFYCALP*IDTPSNKAEAT
Trigger: TGTAGCTTCTGCCTTGTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTAAAAGAATTCCTTAGCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR TCA 72 bp TACTTCTTTTGTCACTGCATCTCTGGGATTTCTCCCTaGAGTGGCGTTTTAGGTGTTCGATCAGATGCGAAT +
Preference number: 3 (lower is better)
Translates to: YFFCHCISGISP*SGVLGVRSDAN
Trigger: ATTCGCATCTGATCGAACACCTAAAACGCCACTTCAGGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATCTTGAAGTTGTTACTTaGCTCATTATAGGAGTATGG +
Preference number: 3 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDLEVVT*LIIGVW
Trigger: CCATACTCCTATAATGAGCAAAGTAACAACTTCAAG...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR CAA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTAACCTATTTGTGAGTTaGATGGTAACGCTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSNLFVS*MVTLEK
Trigger: TTTTTCCAGCGTTACCATCAAACTCACAAATAGGTT...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR CAA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCCAGAGAAGTGGTGGATaGAATAAGGCAGCAGAAACA +
Preference number: 3 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLQRSGG*NKAAET
Trigger: TGTTTCTGCTGCCTTATTCAATCCACCACTTCTCTG...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR GCA 72 bp TCTCTTTCATGGGAATTCCCTGCTTTCTATCCAGCTTaGCTTGAAACTCACAGCCTTCTCCAAAATCTTGAA +
Preference number: 3 (lower is better)
Translates to: SLSWEFPAFYPA*LETHSLLQNLE
Trigger: TTCAAGATTTTGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGCAGGGAATTCCCATGAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR-3UTR CAA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR GCA 72 bp CTGCTCACGACTGATTACTTTCAATCCCAGCTGCAATaGAAACTGAAACTCATTCTGTATATCACCACTCTA +
Preference number: 3 (lower is better)
Translates to: LLTTDYFQSQLQ*KLKLILYITTL
Trigger: TAGAGTGGTGATATACAGAATGAGTTTCAGTTTGCATTGCAGCTGGGATTGAAAGTAATCAGTCGTGAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
3UTR-3UTR CAA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAACGCTGGAAAAATGCTaGAAGTTGTTACTTTGCTCA +
Preference number: 3 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRTLEKC*KLLLCS
Trigger: TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGT...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTACGCTGGAAAAATGCTaGAAGTTGTTACTTTGCTCA +
Preference number: 3 (lower is better)
Translates to: VPSVSFEFQVKTECQLQATLEKC*KLLLCS
Trigger: TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGT...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR CAA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTCTTGAAGTTGTTACTTaGCTCATTATAGGAGTATGG +
Preference number: 3 (lower is better)
Translates to: VPSVSFEFQVKTECQLQALEVVT*LIIGVW
Trigger: CCATACTCCTATAATGAGCAAAGTAACAACTTCAAG...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR TCA 72 bp ATTTGCCCTGTCATTTTCTTCTCTTCAAGGATTCAGTaGCTTTCAGCAAGAGCCACCCAATTCCATAATCTT +
Preference number: 3 (lower is better)
Translates to: ICPVIFFSSRIQ*LSARATQFHNL
Trigger: AAGATTATGGAATTGGGTGGCTCTTGCTGAAAGTCACTGAATCCTTGAAGAGAAGAAAATGACAGGGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR-3UTR CAA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTAACCTATTTGTGAGTTaGATGGTAACGCTGGAAAAA +
Preference number: 3 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPNLFVS*MVTLEK
Trigger: TTTTTCCAGCGTTACCATCAAACTCACAAATAGGTT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR TCA 72 bp TTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTaGGTTATAACTAAAGGATTTCAACCTATTTGTGAG +
Preference number: 3 (lower is better)
Translates to: FYYCGFSGVPKG*VITKGFQPICE
Trigger: CTCACAAATAGGTTGAAATCCTTTAGTTATAACTCAGCCTTTAGGAACACCGGAGAACCCACAATAATAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR CCA 72 bp ATGCTTGAAGTTGTTACTTTGCTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTTTCTCTAAAATTAAGA +
Preference number: 3 (lower is better)
Translates to: MLEVVTLLIIGV*FPSRKVSLKLR
Trigger: TCTTAATTTTAGAGAAACCTTCCTGGAGGGAAACCATACTCCTATAATGAGCAAAGTAACAACTTCAAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACCCAGCCCACCCTCAGTaGCTCGGACGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNPAHPQ*LGRLQG
Trigger: GCCCTGGAGACGTCCGAGTCACTGAGGGTGGGCTGG...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394170.6
CDS-3UTR TCA 90 bp TCCCAGCTATTCAGGAGGCTGAGGTGGCTAGACCACTTGAGCCCGGGAGGTCAATCCCCACAGTGGGGTTaGCCTGCCACCTTTGTACCA +
Preference number: 4 (lower is better)
Translates to: SQLFRRLRWLDHLSPGGQSPQWG*PATFVP
Trigger: TGGTACAAAGGTGGCAGGTCAACCCCACTGTGGGGA...TTGACCTCCCGGGCTCAAGTGGTCTAGCCACCTCAGCCTCCTGAATAGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCGCGCTGGTGCTGGGTaGGGTGCACCCGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: GSHLLRAILQFLENKSCERAGAG*GAPADC
Trigger: ACAATCAGCGGGTGCACCTCACCCAGCACCAGCGCG...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTCGCGCTGGTGCTGGGTaGGGTGCACCCGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGRAGAG*GAPADC
Trigger: ACAATCAGCGGGTGCACCTCACCCAGCACCAGCGCG...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGTCAGGGGATGGGGGCTaGAGGACTCCTGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGSGDGG*RTPALL
Trigger: GAGCAGTGCAGGAGTCCTGCAGCCCCCATCCCCTGA...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGGCTTCTGTGGCGCTTaGTCAGGCTGGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGGFCGA*SGWVST
Trigger: CGTGGACACCCAGCCTGAGCAAGCGCCACAGAAGCC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCAGGCGCTTGCTCAGGCTaGGTGTCCACGGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: FIVSQASQQKRPEQCPRAGACSG*VSTVRG
Trigger: TCCCCTGACCGTGGACACCCAGCCTGAGCAAGCGCC...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTCCCCGCAGCCGAGGCTaGGAAGATGCGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFPRSRG*EDAVLP
Trigger: GGGAAGAACCGCATCTTCCCAGCCTCGGCTGCGGGG...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp TCCCAGCTATTCAGGAGGCTGAGGTGGCTAGACCACTTGAGCCCGGGAGGTCAAACAGTGGGGTTGACCTaGCACCTTTGTACCATGCCT +
Preference number: 4 (lower is better)
Translates to: SQLFRRLRWLDHLSPGGQTVGLT*HLCTMP
Trigger: AGGCATGGTACAAAGGTGGCAGGTCAACCCCACTGT...TTGACCTCCCGGGCTCAAGTGGTCTAGCCACCTCAGCCTCCTGAATAGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTAGCCTCCCGGGGTCCTaGAGCCTCATGGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGSLPGS*SLMVLE
Trigger: TTCCAGTACCATGAGGCTTCAGGACCCCGGGAGGCT...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCAGCAGAAACGGCCTaGGCAGTGCCCAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNSAETA*AVPKST
Trigger: AGTGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGA...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGACTCCTGGGTGAGGTaGGATGGCTCTCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGDSWVR*DGSHLL
Trigger: CAGGAGATGAGAGCCATCTCACCTCACCCAGGAGTC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGGAAGTGACTCCTGGGTaGGGTGAGATGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQEVTPG*GEMALI
Trigger: GATGAGAGCCATCTCACCTCACCCAGGAGTCACTTC...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATGGCGCTTGCTCAGGCTaGGTGTCCACGGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDGACSG*VSTVRG
Trigger: TCCCCTGACCGTGGACACCCAGCCTGAGCAAGCGCC...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGAGCCTCTGGAGTAGCTaGGACTATAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQSLWSS*DYRHAP
Trigger: TGGCGCATGCCTATAGTCCCAGCTACTCCAGAGGCT...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGGTGTAGAGAGGAAGTaGCTCCTGGGTGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGGVERK*LLGEVR
Trigger: TCTCACCTCACCCAGGAGTCACTTCCTCTCTACACC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp CTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTACTCCCTCCTGGCGAGTaGCCAACTCCACAATCCACT +
Preference number: 4 (lower is better)
Translates to: LLGPGLVIRLGPTPSMGLLPPGE*PTPQST
Trigger: AGTGGATTGTGGAGTTGGTCACTCGCCAGGAGGGAG...TAAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACCACTGCTCCAGGTGTTaGCATCTTCCGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNHCSRC*HLPRKH
Trigger: GTGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTG...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGGGCTGCAGGACTCCTaGACTGCTCCAGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSGLQDS*TAPGVA
Trigger: GGCAACACCTGGAGCAGTGCAGGAGTCCTGCAGCCC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTGGGCTGCAGGACTCCTaGACTGCTCCAGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSGLQDS*TAPGVA
Trigger: GGCAACACCTGGAGCAGTGCAGGAGTCCTGCAGCCC...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACAAACGGCCTGAGCAGTaGCCAAGAGCACTCACTCAC +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNKRPEQ*PRALTH
Trigger: GTGAGTGAGTGCTCTTGGGCACTGCTCAGGCCGTTT...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTGGCCTGATCCAAGGGTaGCAGAGCAGTCATAGCACC +
Preference number: 4 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFGLIQG*QSSHST
Trigger: GGTGCTATGACTGCTCTGGCACCCTTGGATCAGGCC...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCAAGATGTCCAGCCAGGTaGGAACGCCTCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FIVSQASQQKRPEQCPRARCPAR*ERLPKP
Trigger: AGGCTTTGGGAGGCGTTCCCACCTGGCTGGACATCT...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGTCTTCACTCCCTCCTaGCGAGTGACCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGVFTPS*RVTNST
Trigger: TGTGGAGTTGGTCACTCGCCAGGAGGGAGTGAAGAC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATGTCTTCACTCCCTCCTaGCGAGTGACCAACTCCACA +
Preference number: 4 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNVFTPS*RVTNST
Trigger: TGTGGAGTTGGTCACTCGCCAGGAGGGAGTGAAGAC...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTGGGCTAGAGTGCAGTaGCGTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNWARVQ*RDLSSL
Trigger: CAGTGAGCTGAGATCACGCCACTGCACTCTAGCCCA...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCACAATCGGCGGGGAGATaGGACGCGGGCCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAQSAGR*DAGPES
Trigger: GGACTCGGGGCCCGCGTCCCATCTCCCCGCCGATTG...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394170.6
3UTR CAA 72 bp ATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTaGCAGCCCAAACTCAGAGCAGCTGGGGATGGGGGT +
Preference number: 4 (lower is better)
Translates to: ILQFLENKSCEH*QPKLRAAGDGG
Trigger: ACCCCCATCCCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCGCAAAGTCTGGATCCTaGGGAACGCTCCTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHAAKSGS*GTLLSV
Trigger: CACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGC...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGGAGAACAAGAGCTGTaGGCACTTGCAGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGGEQEL*ALAAQT
Trigger: AGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGGACTCCTGGGTGAGGTaGGATGGCTCTCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSEDSWVR*DGSHLL
Trigger: CAGGAGATGAGAGCCATCTCACCTCACCCAGGAGTC...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp CTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTAATGGTTTCGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLGPGLVIRLGPTPSMGLMVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCGAAACCAT...TAAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTAAACGGCCTGAGCAGTaGCCAAGAGCACTCACTCAC +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGKRPEQ*PRALTH
Trigger: GTGAGTGAGTGCTCTTGGGCACTGCTCAGGCCGTTT...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCCCACACTCATCCGAGGCTGGGAAGATaGGGTTCTTCCCACGGAGAG +
Preference number: 4 (lower is better)
Translates to: VLGVRSDANGDRSSSHTHPRLGR*GSSHGE
Trigger: CTCTCCGTGGGAAGAACCGCATCTTCCCAGCCTCGG...ATGAGTGTGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGGAAGCTGTCAGCTCCTaGCTGTCCTTCAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSEEAVSS*LSFRGR
Trigger: CCTTCCCCTGAAGGACAGCCAGGAGCTGACAGCTTC...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCCTAGGGGAGCTCTCCTaGAACATCAAGCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFLGELS*NIKLPA
Trigger: TGCGGGGAGCTTGATGTTCCAGGAGAGCTCCCCTAG...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CAA 72 bp ATCGCTGCATCTGTGCCCTCTCTCGCCATGTGTGCTTaGCTTAGGGCTGATGTCTGTGATTGCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: IAASVPSLAMCA*LRADVCDCIQI
Trigger: GATCTGGATGCAATCACAGACATCAGCCCTAAGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCCTTCCACCTTCACTATaGAAAGGTCTTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSLPPSL*KGLPAP
Trigger: AGGAGCAGGAAGACCTTTTCATAGTGAAGGTGGAAG...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACGGTACTGGAAGTGCCTaGAGCGCTGGTAAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNGTGSA*SAGKKS
Trigger: AGACTTTTTACCAGCGCTTCAGGCACTTCCAGTACC...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATGGTACTGGAAGTGCCTaGAGCGCTGGTAAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNGTGSA*SAGKKS
Trigger: AGACTTTTTACCAGCGCTTCAGGCACTTCCAGTACC...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTTCCCCACAGTGGGGTTaGCCTGCCACCTTTGTACCA +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSSPQWG*PATFVP
Trigger: TGGTACAAAGGTGGCAGGTCAACCCCACTGTGGGGA...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGACGCGCTGGTGCTGGGTaGGGTGCACCCGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRRAGAG*GAPADC
Trigger: ACAATCAGCGGGTGCACCTCACCCAGCACCAGCGCG...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATCCCATGTGGAGCACCTaGTGTTCAATTAGGCTAACG +
Preference number: 4 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNPMWST*CSIRLT
Trigger: CGTTAGCCTAATTGAACATCAGGTGCTCCACATGGG...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGACTCCTGGGTGAGGTaGGATGGCTCTCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSDSWVR*DGSHLL
Trigger: CAGGAGATGAGAGCCATCTCACCTCACCCAGGAGTC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACGGTGTAGAGAGGAAGTaGCTCCTGGGTGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHGVERK*LLGEVR
Trigger: TCTCACCTCACCCAGGAGTCACTTCCTCTCTACACC...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGCTCCCTCCTGGCGAGTaGCCAACTCCACAATCCACT +
Preference number: 4 (lower is better)
Translates to: PWSFLRFNQMNQVLGCRELPPGE*PTPQST
Trigger: AGTGGATTGTGGAGTTGGTCACTCGCCAGGAGGGAG...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp CTGAAGTGGCGTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCATGGTTTCGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LKWRFRCSIRCEWRPKFFMVSIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCGAAACCAT...GAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAACGCCACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATCCTCAGAATGGCCCCTaGCCCCGAGATACAGAGACT +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDPQNGP*PRDTET
Trigger: AGTCTCTGTATCTCGGGGTCAGGGGCCATTCTGAGG...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp CTGAAGTGGCGTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCGGCGGGTTGTACTCCTaGATCCAGGTGCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKWRFRCSIRCEWRPKFFGGLYS*IQVQSS
Trigger: AGAAGACTGCACCTGGATGCAGGAGTACAACCCGCC...GAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAACGCCACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTATTTGCCACAATCGCTaGATCTGTGCCCTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGICHNR*ICALSR
Trigger: GCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAAT...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTTGCCTGTCTTCTCTaGTCCCCTAAGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGFACLL*SPKVPL
Trigger: GAGAGGGACCTTAGGGGAGCAGAGAAGACAGGCAAA...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACACAGGACCTCCTGCCTaGCTGCTCACGACTGATTAC +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHTGPPA*LLTTDY
Trigger: GTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGT...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCAGCCACTCTCTCCCCTaGTCCATCCCAAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: ETPLREGMKQDREGRELSSHSLP*SIPKPF
Trigger: GAATGGCTTTGGGATGGAGCAGGGGAGAGAGTGGCT...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394170.6
CDS-3UTR CCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGGAAGTCTTCGAGGCTaGCTGTGTTACACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGGSLRG*LCYTLD
Trigger: GTCAAGAGTGTAACACAGCCAGCCTCGAAGACTTCC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326775.10
CDS-3UTR CCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTGGTCCTGAAGCCTCATaGTACTGGAAGTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGGPEAS*YWKCLK
Trigger: CTTCAGGCACTTCCAGTACCATGAGGCTTCAGGACC...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCGGCGCTTGCTCAGGCTaGGTGTCCACGGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFGACSG*VSTVRG
Trigger: TCCCCTGACCGTGGACACCCAGCCTGAGCAAGCGCC...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCAAGATGTCCAGCCAGGTaGGAACGCCTCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QVKTECQLQAFRIPRPCPRCPAR*ERLPKP
Trigger: AGGCTTTGGGAGGCGTTCCCACCTGGCTGGACATCT...TGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGAGATGTCCAGCCAGGTaGGAACGCCTCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PWSFLRFNQMNQVLGCRERCPAR*ERLPKP
Trigger: AGGCTTTGGGAGGCGTTCCCACCTGGCTGGACATCT...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGGATTTCTCTCGGGAGTaGAGTCGAAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSHLLRAILQFLENKSCEDFSRE*SRRCPA
Trigger: GGCTGGACATCTTCGACTCCACTCCCGAGAGAAATC...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACCAAACTCAGAGCAGCTaGGGATGGGGGTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHQTQSS*GWGSQL
Trigger: AAGCTGAGACCCCCATCCCCAGCTGCTCTGAGTTTG...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCTGGATTCCTCAGAATaGCCCCTGACCCCGAGATAC +
Preference number: 4 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSELDSSE*PLTPRY
Trigger: GTATCTCGGGGTCAGGGGCCATTCTGAGGAATCCAG...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCAGCCTCCCGGGGTCCTaGAGCCTCATGGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCSLPGS*SLMVLE
Trigger: TTCCAGTACCATGAGGCTTCAGGACCCCGGGAGGCT...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTGCAAAGTCTGGATCCTaGGGAACGCTCCTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSAKSGS*GTLLSV
Trigger: CACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGC...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCTGGATGCGCCGATGCTaGATAAAGTTTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHAWMRRC*IKFEAW
Trigger: CCAAGCCTCAAACTTTATTCAGCATCGGCGCATCCA...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGTACTGTGCGCTTCCCTaGATAGATACGCCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: GSHLLRAILQFLENKSCEYCALP*IDTPSN
Trigger: GTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTA...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATAAGTCTAGCTTGGCCTaGTCCAAGGGTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDKSSLA*SKGARA
Trigger: TGCTCTGGCACCCTTGGATCAGGCCAAGCTAGACTT...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGATGAAAAGGTCTTCCTaGTCCTGGGAAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGMKRSS*SWEVSA
Trigger: AGCTGAGACTTCCCAGGAGCAGGAAGACCTTTTCAT...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACCAACAATCTGCTGTCTaGGTTCCTCAAGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNQQSAV*VPQVLA
Trigger: AGCGAGAACTTGAGGAACGCAGACAGCAGATTGTTG...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGCAGGACTCCTGCACTaGTCCAGGTGTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSAGLLH*SRCCHL
Trigger: AAGATGGCAACACCTGGAGCAGTGCAGGAGTCCTGC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAGGGCTGCAGGACTCCTaGACTGCTCCAGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAGLQDS*TAPGVA
Trigger: GGCAACACCTGGAGCAGTGCAGGAGTCCTGCAGCCC...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCTCAGGGGATGGGGGCTaGAGGACTCCTGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFSGDGG*RTPALL
Trigger: GAGCAGTGCAGGAGTCCTGCAGCCCCCATCCCCTGA...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCATCAGGGGATGGGGGCTaGAGGACTCCTGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWASGDGG*RTPALL
Trigger: GAGCAGTGCAGGAGTCCTGCAGCCCCCATCCCCTGA...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGTGGGACTGGTCCAAATaGCCCCATTCCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PWSFLRFNQMNQVLGCREWDWSK*PHSSRM
Trigger: CATCCTGGAGGAATGGGGGCATTTGGACCAGTCCCA...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000394170.6
CDS-3UTR GCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCACAGTGGGGTTGACCTaGCACCTTTGTACCATGCCT +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFTVGLT*HLCTMP
Trigger: AGGCATGGTACAAAGGTGGCAGGTCAACCCCACTGT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTCGCCATGTGTGCTTTaGTTAGGGCTGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGSPCVL*LGLMSV
Trigger: CACAGACATCAGCCCTAAGCAAAGCACACATGGCGA...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGTCGCCATGTGTGCTTTaGTTAGGGCTGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GSHLLRAILQFLENKSCESPCVL*LGLMSV
Trigger: CACAGACATCAGCCCTAAGCAAAGCACACATGGCGA...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp CTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTATCGATCAGATGCGAATaGCGACCGAAGTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLGPGLVIRLGPTPSMGLSIRCE*RPKFFP
Trigger: TGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGA...TAAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCGATTTCTCTCGGGAGTaGAGTCGAAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ETPLREGMKQDREGRELSDFSRE*SRRCPA
Trigger: GGCTGGACATCTTCGACTCCACTCCCGAGAGAAATC...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGTCTGGGATTTCTCCCTaGAGTGGCGTTTTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GSHLLRAILQFLENKSCESGISP*SGVLGV
Trigger: AACACCTAAAACGCCACTTCAGGGAGAAATCCCAGA...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCTATCCAGCTTGCCTTaGAACTCACAGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSELSSLP*NSQPSP
Trigger: TGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAG...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCCTATCCAGCTTGCCTTaGAACTCACAGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFLSSLP*NSQPSP
Trigger: TGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAG...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCCCCATGTGGAGCACCTaGTGTTCAATTAGGCTAACG +
Preference number: 4 (lower is better)
Translates to: ETPLREGMKQDREGRELSPMWST*CSIRLT
Trigger: CGTTAGCCTAATTGAACATCAGGTGCTCCACATGGG...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCTACTGTGCGCTTCCCTaGATAGATACGCCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ETPLREGMKQDREGRELSYCALP*IDTPSN
Trigger: GTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTA...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGGGAGAACAAGAGCTGTaGGCACTTGCAGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: PWSFLRFNQMNQVLGCREGEQEL*ALAAQT
Trigger: AGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCC...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GGCTCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGTTCCCCACAAGTGAATaGCTTAGTGACTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GSHLLRAILQFLENKSCEFPTSE*LSDWTG
Trigger: ACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAA...CTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATAGAGCCATACAAATCTaGCATCAGGCCCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNRAIQI*HQAQPK
Trigger: TTTAGGTTGGGCCTGATGTCAGATTTGTATGGCTCT...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTATGAAAAGGTCTTCCTaGTCCTGGGAAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFMKRSS*SWEVSA
Trigger: AGCTGAGACTTCCCAGGAGCAGGAAGACCTTTTCAT...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCACTCCTGCATCCAGGTaGAGTCTTCTTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: ETPLREGMKQDREGRELSTPASR*SLLLPP
Trigger: AGGTGGAAGAAGAAGACTGCACCTGGATGCAGGAGT...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTGGGCTGCAGGACTCCTaGACTGCTCCAGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPGLQDS*TAPGVA
Trigger: GGCAACACCTGGAGCAGTGCAGGAGTCCTGCAGCCC...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTGGCTTCTGTGGCGCTTaGTCAGGCTGGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPGFCGA*SGWVST
Trigger: CGTGGACACCCAGCCTGAGCAAGCGCCACAGAAGCC...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGCTGATGTCTGTGATTaGATCCAGATCCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGADVCD*IQIPFL
Trigger: CAGAAAAGGGATCTGGATGCAATCACAGACATCAGC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTCGCCATGTGTGCTTTaGTTAGGGCTGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHSPCVL*LGLMSV
Trigger: CACAGACATCAGCCCTAAGCAAAGCACACATGGCGA...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATATTTGCCACAATCGCTaGATCTGTGCCCTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDICHNR*ICALSR
Trigger: GCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAAT...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGTACTTCTTTTGTCACTaGATCTCTGGGATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQYFFCH*ISGISP
Trigger: GGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTA...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACGCTTTCTATCCAGCTTaGCTTGAAACTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNAFYPA*LETHSL
Trigger: AAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGC...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATAGACTGAATGTCAACTaGAGGCTTTCCGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNRLNVN*RLSEFL
Trigger: GAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCT...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTTTTGCCTGTCTTCTCTaGTCCCCTAAGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSFACLL*SPKVPL
Trigger: GAGAGGGACCTTAGGGGAGCAGAGAAGACAGGCAAA...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCCCACACTCATTTTGCCTGTCTTCTCTaGTCCCCTAAGGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VLGVRSDANGDRSSSHTHFACLL*SPKVPL
Trigger: GAGAGGGACCTTAGGGGAGCAGAGAAGACAGGCAAA...ATGAGTGTGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATGACCTCCTGCCTGCCTaGTCACGACTGATTACTTTC +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDDLLPA*SRLITF
Trigger: GAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTC...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGGTCCTGAAGCCTCATaGTACTGGAAGTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSGPEAS*YWKCLK
Trigger: CTTCAGGCACTTCCAGTACCATGAGGCTTCAGGACC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGGCGCTTGCTCAGGCTaGGTGTCCACGGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPGACSG*VSTVRG
Trigger: TCCCCTGACCGTGGACACCCAGCCTGAGCAAGCGCC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTGAGACGAGGCTTCTGTaGCGCTTGCTCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAETRLL*RLLRLG
Trigger: ACCCAGCCTGAGCAAGCGCCACAGAAGCCTCGTCTC...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAGAGACGAGGCTTCTGTaGCGCTTGCTCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAETRLL*RLLRLG
Trigger: ACCCAGCCTGAGCAAGCGCCACAGAAGCCTCGTCTC...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTCGATCAGATGCGAATaGCGACCGAAGTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFSIRCE*RPKFFP
Trigger: TGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGA...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGGACCATGTCCATCCATaGATTCTCTTCTTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQDHVHP*ILFLSR
Trigger: TCTAGACAAGAAGAGAATCCATGGATGGACATGGTC...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCGGGTTTCACCATGTTaGTTGGCCAGGATGGTTTCG +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSRVSPC*LARMVS
Trigger: CGAAACCATCCTGGCCAACCAACATGGTGAAACCCG...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp GTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCCCACACTCATGTACAGATCTGGACCTaGATTCCTCAGAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLGVRSDANGDRSSSHTHVQIWT*IPQNGP
Trigger: GGGGCCATTCTGAGGAATCCAGGTCCAGATCTGTAC...ATGAGTGTGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTGGAAGTCTTCGAGGCTaGCTGTGTTACACTGAAACA +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGGSLRG*LCYTET
Trigger: TGTTTCAGTGTAACACAGCCAGCCTCGAAGACTTCC...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACCCTGGACTCATAACCTaGGACCCAGTTGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHPGLIT*DPVERS
Trigger: ACTTCTCTCAACTGGGTCCCAGGTTATGAGTCCAGG...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCTTCCACCTTCACTATaGAAAGGTCTTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSELPPSL*KGLPAP
Trigger: AGGAGCAGGAAGACCTTTTCATAGTGAAGGTGGAAG...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCGCAAAGTCTGGATCCTaGGGAACGCTCCTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCAKSGS*GTLLSV
Trigger: CACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGC...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTGGATGCGCCGATGCTaGATAAAGTTTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDWMRRC*IKFEAW
Trigger: CCAAGCCTCAAACTTTATTCAGCATCGGCGCATCCA...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTGTAATGCTGAATaGGGTCTGAGCTATAACCAA +
Preference number: 4 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSFCNAE*GLSYNQ
Trigger: TTGGTTATAGCTCAGACCTCATTCAGCATTACAGAA...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATGTTTCAAGTGAAGACTaGATGTCAACTGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNVSSED*MSTAGF
Trigger: AAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAAC...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTACTGTGCGCTTCCCTaGATAGATACGCCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDYCALP*IDTPSN
Trigger: GTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTA...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTTACTGTGCGCTTCCCTaGATAGATACGCCGTCAAAC +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSYCALP*IDTPSN
Trigger: GTTTGACGGCGTATCTATTCAGGGAAGCGCACAGTA...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCAGAGAAGTGGTGGATTaGATAAGGCAGCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHAREVVD*IRQQKH
Trigger: GTGTTTCTGCTGCCTTATTCAATCCACCACTTCTCT...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGATCAGCAGAAACGGCCTaGGCAGTGCCCAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRSAETA*AVPKST
Trigger: AGTGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGA...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGTCTTCAAGGATTCAGTaGCTTTCAGCAAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: FSSFWRTRAVSTCSPNSESSRIQ*LSARAT
Trigger: GGTGGCTCTTGCTGAAAGTCACTGAATCCTTGAAGA...CTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACATGAAAAGGTCTTCCTaGTCCTGGGAAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHMKRSS*SWEVSA
Trigger: AGCTGAGACTTCCCAGGAGCAGGAAGACCTTTTCAT...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCAAGGTCACTGACTTCTaGAAAGTCTGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFKVTDF*KVWILR
Trigger: CCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CTGAAGTGGCGTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCAAGGTCACTGACTTCTaGAAAGTCTGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKWRFRCSIRCEWRPKFFKVTDF*KVWILR
Trigger: CCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTT...GAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAACGCCACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp CTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTAGCTGATGTCTGTGATTaGATCCAGATCCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLGPGLVIRLGPTPSMGLADVCD*IQIPFL
Trigger: CAGAAAAGGGATCTGGATGCAATCACAGACATCAGC...TAAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAGAAGCTGTCAGCTCCTaGCTGTCCTTCAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVSFEFQVKTECQLQAFREAVSS*LSFRGR
Trigger: CCTTCCCCTGAAGGACAGCCAGGAGCTGACAGCTTC...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGAAGCTGTCAGCTCCTaGCTGTCCTTCAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLEAVSS*LSFRGR
Trigger: CCTTCCCCTGAAGGACAGCCAGGAGCTGACAGCTTC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACATTTTCACCAACTTCTaGGACCCAGTTGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNIFTNF*DPVERS
Trigger: ACTTCTCTCAACTGGGTCCCAGAAGTTGGTGAAAAT...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000394170.6
CDS-3UTR CCA 90 bp CAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCAGACTTCTGCAAAGTCTaGATCCTGAGGAACGCTCCT +
Preference number: 4 (lower is better)
Translates to: QVKTECQLQAFRIPRPCPDFCKV*ILRNAP
Trigger: AGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTC...TGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCGATCAGATGCGAATaGCGACCGAAGTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDSIRCE*RPKFFP
Trigger: TGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGA...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTGGATCTGTCCTCTCATaGCTTCTCAGGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGGSVLS*LLRCLK
Trigger: CTTTAAACACCTGAGAAGCCATGAGAGGACAGATCC...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTCAAACTCAGAGCAGCTaGGGATGGGGGTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GEHEKISIIVGSPVFLKAQTQSS*GWGSQL
Trigger: AAGCTGAGACCCCCATCCCCAGCTGCTCTGAGTTTG...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGCAAAGTCTGGATCCTaGGGAACGCTCCTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLAKSGS*GTLLSV
Trigger: CACCGAAAGGAGCGTTCCTCAGGATCCAGACTTTGC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCTTGTCTTCAATCACTGTCAAGTTCCAACTATATGCTTCCTCACAGATGCCATCCCCACAGTGGGGTTaGCCTGCCACCTTTGTACCA +
Preference number: 4 (lower is better)
Translates to: FLSSITVKFQLYASSQMPSPQWG*PATFVP
Trigger: TGGTACAAAGGTGGCAGGTCAACCCCACTGTGGGGA...TGGCATCTGTGAGGAAGCATATAGTTGGAACTTGACAGTGATTGAAGACAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTTGGACACTGTGGTGCTaGACCAGGTGGGAACTCACC +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPWTLWC*TRWELT
Trigger: GGTGAGTTCCCACCTGGTTCAGCACCACAGTGTCCA...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTTCTGGGATTTCTCCCTaGAGTGGCGTTTTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSSGISP*SGVLGV
Trigger: AACACCTAAAACGCCACTTCAGGGAGAAATCCCAGA...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGATTAGGCTAACGTACTaGAAAAAGATTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQIRLTY*KKISPH
Trigger: ATGTGGGGAAATCTTTTTTCAGTACGTTAGCCTAAT...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTATGCTGAATGAGGTCTaGGCTATAACCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFMLNEV*AITKGF
Trigger: AAAGCCTTTGGTTATAGCTCAGACCTCATTCAGCAT...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGATGTTGATTAAGATGTaGCTTCAGAGTGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGMLIKM*LQSEAS
Trigger: AGAGGCTTCACTCTGAAGTCACATCTTAATCAACAT...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCAGAGAAGTGGTGGATTaGATAAGGCAGCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFREVVD*IRQQKH
Trigger: GTGTTTCTGCTGCCTTATTCAATCCACCACTTCTCT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTTCAGCAGAAACGGCCTaGGCAGTGCCCAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPSAETA*AVPKST
Trigger: AGTGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGA...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGAAGTGACTCCTGGGTaGGGTGAGATGGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLEVTPG*GEMALI
Trigger: GATGAGAGCCATCTCACCTCACCCAGGAGTCACTTC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAGGTGTAGAGAGGAAGTaGCTCCTGGGTGAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAGVERK*LLGEVR
Trigger: TCTCACCTCACCCAGGAGTCACTTCCTCTCTACACC...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAAGTCTAGCTTGGCCTaGTCCAAGGGTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIKSSLA*SKGARA
Trigger: TGCTCTGGCACCCTTGGATCAGGCCAAGCTAGACTT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCCTCTTTAATATCTTCTaGAGGACACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSLFNIF*RTLSVA
Trigger: TGCTACTGAAAGTGTCCTTCAGAAGATATTAAAGAG...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCCACTGCTCCAGGTGTTaGCATCTTCCGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLHCSRC*HLPRKH
Trigger: GTGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTG...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGCACTGCTCCAGGTGTTaGCATCTTCCGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQHCSRC*HLPRKH
Trigger: GTGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTG...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAGCAGGACTCCTGCACTaGTCCAGGTGTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRAGLLH*SRCCHL
Trigger: AAGATGGCAACACCTGGAGCAGTGCAGGAGTCCTGC...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATCAGGGGATGGGGGCTaGAGGACTCCTGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLSGDGG*RTPALL
Trigger: GAGCAGTGCAGGAGTCCTGCAGCCCCCATCCCCTGA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAGGCTTCTGTGGCGCTTaGTCAGGCTGGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSGFCGA*SGWVST
Trigger: CGTGGACACCCAGCCTGAGCAAGCGCCACAGAAGCC...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGTGGGACTGGTCCAAATaGCCCCATTCCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQWDWSK*PHSSRM
Trigger: CATCCTGGAGGAATGGGGGCATTTGGACCAGTCCCA...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS-3UTR GCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGAGTCATCAGAAATCTaGTTCACTATGAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGESSEI*FTMSSI
Trigger: TATGGAGCTCATAGTGAAGCAGATTTCTGATGACTC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAATTTGCCACAATCGCTaGATCTGTGCCCTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKICHNR*ICALSR
Trigger: GCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAAT...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCATACTTCTTTTGTCACTaGATCTCTGGGATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FIVSQASQQKRPEQCPRAYFFCH*ISGISP
Trigger: GGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTA...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCACAATCCCAGCTGCAATaGAAACTGAAACTCATTCTG +
Preference number: 4 (lower is better)
Translates to: FIVSQASQQKRPEQCPRAQSQLQ*KLKLIL
Trigger: CAGAATGAGTTTCAGTTTGCATTGCAGCTGGGATTG...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAACAGGACCTCCTGCCTaGCTGCTCACGACTGATTAC +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWATGPPA*LLTTDY
Trigger: GTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGT...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCAAAAGTCTCAAACGTTaGCGGGTTGTACTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFKSLKR*RVVLLH
Trigger: ATGCAGGAGTACAACCCGCCAACGTTTGAGACTTTT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTGGTCCTGAAGCCTCATaGTACTGGAAGTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GEHEKISIIVGSPVFLKAGPEAS*YWKCLK
Trigger: CTTCAGGCACTTCCAGTACCATGAGGCTTCAGGACC...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTTGTCACTGCATCTCTaGGATTTCTCCCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDLSLHL*DFSLKW
Trigger: CCACTTCAGGGAGAAATCCCAGAGATGCAGTGACAA...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTGACCATGTCCATCCATaGATTCTCTTCTTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGDHVHP*ILFLSR
Trigger: TCTAGACAAGAAGAGAATCCATGGATGGACATGGTC...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCACTGCCCTCATTCCTGTaGGTAATACAAGATCAAACA +
Preference number: 4 (lower is better)
Translates to: FIVSQASQQKRPEQCPRALPSFL*VIQDQT
Trigger: TGTTTGATCTTGTATTACCCACAGGAATGAGGGCAG...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCCAAACTCAGAGCAGCTaGGGATGGGGGTCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLQTQSS*GWGSQL
Trigger: AAGCTGAGACCCCCATCCCCAGCTGCTCTGAGTTTG...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGAGCCTCTGGAGTAGCTaGGACTATAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQSLWSS*DYRHAP
Trigger: TGGCGCATGCCTATAGTCCCAGCTACTCCAGAGGCT...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAGCCTCCCGGGGTCCTaGAGCCTCATGGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLSLPGS*SLMVLE
Trigger: TTCCAGTACCATGAGGCTTCAGGACCCCGGGAGGCT...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAGCCTCCCGGGGTCCTaGAGCCTCATGGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLSLPGS*SLMVLE
Trigger: TTCCAGTACCATGAGGCTTCAGGACCCCGGGAGGCT...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAATGGCGCCACCCAGTGTaGTTCAGAGTCATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKWRHPV*FRVIRN
Trigger: ATTTCTGATGACTCTGAATCACACTGGGTGGCGCCA...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTATGTTGATTAAGATGTaGCTTCAGAGTGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGMLIKM*LQSEAS
Trigger: AGAGGCTTCACTCTGAAGTCACATCTTAATCAACAT...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTACCAAGAAGGTCCTCTaGCACACACTTGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSTKKVL*HTLGIK
Trigger: TTTAATGCCAAGTGTGTGTCAGAGGACCTTCTTGGT...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAGGCTTCTGTGGCGCTTaGTCAGGCTGGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIGFCGA*SGWVST
Trigger: CGTGGACACCCAGCCTGAGCAAGCGCCACAGAAGCC...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCGAGTCATCAGAAATCTaGTTCACTATGAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHAESSEI*FTMSSI
Trigger: TATGGAGCTCATAGTGAAGCAGATTTCTGATGACTC...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGATTTGCCACAATCGCTaGATCTGTGCCCTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQICHNR*ICALSR
Trigger: GCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAAT...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTACTTCTTTTGTCACTaGATCTCTGGGATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHYFFCH*ISGISP
Trigger: GGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTA...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGCTTTCTATCCAGCTTaGCTTGAAACTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSAFYPA*LETHSL
Trigger: AAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACCAATCCCAGCTGCAATaGAAACTGAAACTCATTCTG +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHQSQLQ*KLKLIL
Trigger: CAGAATGAGTTTCAGTTTGCATTGCAGCTGGGATTG...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAGACCTCCTGCCTGCCTaGTCACGACTGATTACTTTC +
Preference number: 4 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRDLLPA*SRLITF
Trigger: GAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTC...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGACCTCCTGCCTGCCTaGTCACGACTGATTACTTTC +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLDLLPA*SRLITF
Trigger: GAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTACAGGACCTCCTGCCTaGCTGCTCACGACTGATTAC +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPTGPPA*LLTTDY
Trigger: GTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGAGAGCTGTGAGCACTTaGAGCCCAAACTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQRAVST*SPNSEQ
Trigger: CTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCT...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGGCCTGATCCAAGGGTaGCAGAGCAGTCATAGCACC +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPGLIQG*QSSHST
Trigger: GGTGCTATGACTGCTCTGGCACCCTTGGATCAGGCC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTAAAAGTCTCAAACGTTaGCGGGTTGTACTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSKSLKR*RVVLLH
Trigger: ATGCAGGAGTACAACCCGCCAACGTTTGAGACTTTT...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGGTCCTGAAGCCTCATaGTACTGGAAGTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLGPEAS*YWKCLK
Trigger: CTTCAGGCACTTCCAGTACCATGAGGCTTCAGGACC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGATTTCTCTCGGGAGTaGAGTCGAAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQDFSRE*SRRCPA
Trigger: GGCTGGACATCTTCGACTCCACTCCCGAGAGAAATC...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGATTTCTCTCGGGAGTaGAGTCGAAGATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLDFSRE*SRRCPA
Trigger: GGCTGGACATCTTCGACTCCACTCCCGAGAGAAATC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGGCTGTGTTACACTCTTaGCCACCGCAGTCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLAVLHS*PPQSAQ
Trigger: CTGAGCCGACTGCGGTGGTCAAGAGTGTAACACAGC...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326775.10
CDS-3UTR TCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTTGGCGCCACCCAGTGTaGTTCAGAGTCATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIWRHPV*FRVIRN
Trigger: ATTTCTGATGACTCTGAATCACACTGGGTGGCGCCA...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTGGCGCCACCCAGTGTaGTTCAGAGTCATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAWRHPV*FRVIRN
Trigger: ATTTCTGATGACTCTGAATCACACTGGGTGGCGCCA...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATCCCCACAGTGGGGTTaGCCTGCCACCTTTGTACCA +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSSPQWG*PATFVP
Trigger: TGGTACAAAGGTGGCAGGTCAACCCCACTGTGGGGA...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTAATGCTGAATAAAGTTTaGGGCTTGGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LLGPGLVIRLGPTPSMGLMLNKV*GLEEEF
Trigger: AAATTCTTCCTCCAAGCCTCAAACTTTATTCAGCAT...TAAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTCCCATGTGGAGCACCTaGTGTTCAATTAGGCTAACG +
Preference number: 4 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAPMWST*CSIRLT
Trigger: CGTTAGCCTAATTGAACATCAGGTGCTCCACATGGG...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGCCCATGTGGAGCACCTaGTGTTCAATTAGGCTAACG +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQPMWST*CSIRLT
Trigger: CGTTAGCCTAATTGAACATCAGGTGCTCCACATGGG...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GAAACGCCTTTGAGGGAGGGAATGAAACAGGATAGAGAAGGGAGAGAGCTTAGCTTCTGTAATGCTGAATaGGGTCTGAGCTATAACCAA +
Preference number: 4 (lower is better)
Translates to: ETPLREGMKQDREGRELSFCNAE*GLSYNQ
Trigger: TTGGTTATAGCTCAGACCTCATTCAGCATTACAGAA...GCTAAGCTCTCTCCCTTCTCTATCCTGTTTCATTCCCTCCCTCAAAGGCGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACCGCTGGAAAAATGCTTaGAGTTGTTACTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SHLLRAILQFLENKSCEHRWKNA*SCYFAH
Trigger: ATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCG...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCAAAGCTTACTTCTACTaGACTCATGAAGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFKAYFY*THEAVP
Trigger: AGGAACAGCTTCATGAGTTCAGTAGAAGTAAGCTTT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCTGCCTGCTCACGACTaGTTACTTTCAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFLPAHD*LLSIPA
Trigger: AGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAG...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCCTGCCTGCTCACGACTaGTTACTTTCAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLLPAHD*LLSIPA
Trigger: AGCTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAG...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGAAGTCTAGCTTGGCCTaGTCCAAGGGTGCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPKSSLA*SKGARA
Trigger: TGCTCTGGCACCCTTGGATCAGGCCAAGCTAGACTT...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCTTCCCCACAAGTGAATaGCTTAGTGACTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCFPTSE*LSDWTG
Trigger: ACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAA...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGGCGGGTTGTACTCCTaGATCCAGGTGCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPGGLYS*IQVQSS
Trigger: AGAAGACTGCACCTGGATGCAGGAGTACAACCCGCC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGCACTGCTCCAGGTGTTaGCATCTTCCGAGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPHCSRC*HLPRKH
Trigger: GTGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTG...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAAGGTGTTCGATCAGATaGGAATGGCGACCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWARCSIR*EWRPKF
Trigger: GAACTTCGGTCGCCATTCGCATCTGATCGAACACCT...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGCCTGAACCTGAATTTTaGCAAAACAGAGATACTTTA +
Preference number: 4 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGPEPEF*QNRDTL
Trigger: TAAAGTATCTCTGTTTTGGCAAAATTCAGGTTCAGG...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTCAATCCCAGCTGCAATaGAAACTGAAACTCATTCTG +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSQSQLQ*KLKLIL
Trigger: CAGAATGAGTTTCAGTTTGCATTGCAGCTGGGATTG...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTAGAGCTGTGAGCACTTaGAGCCCAAACTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPRAVST*SPNSEQ
Trigger: CTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAGAGACGAGGCTTCTGTaGCGCTTGCTCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIETRLL*RLLRLG
Trigger: ACCCAGCCTGAGCAAGCGCCACAGAAGCCTCGTCTC...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGGAAGCTGTCAGCTCCTaGCTGTCCTTCAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLEAVSS*LSFRGR
Trigger: CCTTCCCCTGAAGGACAGCCAGGAGCTGACAGCTTC...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGACTTCTGCAAAGTCTaGATCCTGAGGAACGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQDFCKV*ILRNAP
Trigger: AGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTC...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTAATAAAGTTTGAGGCTTaGAGGAAGAATTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: LLGPGLVIRLGPTPSMGLIKFEA*RKNLPQ
Trigger: TTGTGGCAAATTCTTCCTCCAAGCCTCAAACTTTAT...TAAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAAGATGTCCAGCCAGGTaGGAACGCCTCCCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSRCPAR*ERLPKP
Trigger: AGGCTTTGGGAGGCGTTCCCACCTGGCTGGACATCT...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGCTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: PWSFLRFNQMNQVLGCRELIIGV*FPSRKV
Trigger: AACCTTCCTGGAGGGAAACCATACTCCTATAATGAG...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTCTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSLIIGV*FPSRKV
Trigger: AACCTTCCTGGAGGGAAACCATACTCCTATAATGAG...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTGCCCTCATTCCTGTaGGTAATACAAGATCAAACA +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSLPSFL*VIQDQT
Trigger: TGTTTGATCTTGTATTACCCACAGGAATGAGGGCAG...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATCTGCCCTCATTCCTGTaGGTAATACAAGATCAAACA +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDLPSFL*VIQDQT
Trigger: TGTTTGATCTTGTATTACCCACAGGAATGAGGGCAG...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAACTCGTAATTCGCCTTaGTCCAACTCCTTCTATGGG +
Preference number: 4 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKTRNSP*SNSFYG
Trigger: CCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGT...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTATTAGCCACTCATGGTaGCATGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIISHSW*HVPVVP
Trigger: TGGGACTACAGGCACATGCCACCATGAGTGGCTAAT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATATGGACACTGTGGTGCTaGACCAGGTGGGAACTCACC +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIWTLWC*TRWELT
Trigger: GGTGAGTTCCCACCTGGTTCAGCACCACAGTGTCCA...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGGGCGGGTTGTACTCCTaGATCCAGGTGCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLGGLYS*IQVQSS
Trigger: AGAAGACTGCACCTGGATGCAGGAGTACAACCCGCC...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCGGCGGGTTGTACTCCTaGATCCAGGTGCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLGGLYS*IQVQSS
Trigger: AGAAGACTGCACCTGGATGCAGGAGTACAACCCGCC...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGCAACAATCTGCTGTCTaGGTTCCTCAAGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQQQSAV*VPQVLA
Trigger: AGCGAGAACTTGAGGAACGCAGACAGCAGATTGTTG...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTCAACAATCTGCTGTCTaGGTTCCTCAAGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAQQSAV*VPQVLA
Trigger: AGCGAGAACTTGAGGAACGCAGACAGCAGATTGTTG...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTAGCAGGACTCCTGCACTaGTCCAGGTGTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLAGLLH*SRCCHL
Trigger: AAGATGGCAACACCTGGAGCAGTGCAGGAGTCCTGC...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCGCAGGACTCCTGCACTaGTCCAGGTGTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLAGLLH*SRCCHL
Trigger: AAGATGGCAACACCTGGAGCAGTGCAGGAGTCCTGC...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATGGGACTGGTCCAAATaGCCCCATTCCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLWDWSK*PHSSRM
Trigger: CATCCTGGAGGAATGGGGGCATTTGGACCAGTCCCA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS-3UTR GCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGAAGGTCACTGACTTCTaGAAAGTCTGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQKVTDF*KVWILR
Trigger: CCTCAGGATCCAGACTTTGCAGAAGTCAGTGACCTT...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCTTCTGGGAAGGATTCTaGCTTGATTTCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFFWEGF*LDFPTV
Trigger: CACTGTGGGGAAATCAAGGCAGAATCCTTCCCAGAA...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTTCTGGGAAGGATTCTaGCTTGATTTCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLFWEGF*LDFPTV
Trigger: CACTGTGGGGAAATCAAGGCAGAATCCTTCCCAGAA...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCAAGTTCCAACTATATaGTTCCTCACAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSQVPTI*FLTDAI
Trigger: AATGGCATCTGTGAGGAAGCATATAGTTGGAACTTG...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATCAAGTTCCAACTATATaGTTCCTCACAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDQVPTI*FLTDAI
Trigger: AATGGCATCTGTGAGGAAGCATATAGTTGGAACTTG...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAGGCCTGATCCAAGGGTaGCAGAGCAGTCATAGCACC +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIGLIQG*QSSHST
Trigger: GGTGCTATGACTGCTCTGGCACCCTTGGATCAGGCC...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCGATTTCTCCCTGAAGTaGCGTTTTAGGTGTTCGATC +
Preference number: 4 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCDFSLK*RFRCSI
Trigger: GATCGAACACCTAAAACGCCACTTCAGGGAGAAATC...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTGTCACTGCATCTCTaGGATTTCTCCCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VPSVSFEFQVKTECQLQALSLHL*DFSLKW
Trigger: CCACTTCAGGGAGAAATCCCAGAGATGCAGTGACAA...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGATTGTCACTGCATCTCTaGGATTTCTCCCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRLSLHL*DFSLKW
Trigger: CCACTTCAGGGAGAAATCCCAGAGATGCAGTGACAA...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCGGAAGTCTTCGAGGCTaGCTGTGTTACACTCGCACG +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLGSLRG*LCYTRT
Trigger: CGTGCGAGTGTAACACAGCCAGCCTCGAAGACTTCC...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394170.6
CDS-3UTR CCA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTGGAAGTCTTCGAGGCTaGCTGTGTTACACTGAAACA +
Preference number: 4 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAGSLRG*LCYTET
Trigger: TGTTTCAGTGTAACACAGCCAGCCTCGAAGACTTCC...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGCTCCATATTGTCCCTaGACTCATAACCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPAPYCP*THNLGP
Trigger: GGGTCCCAGGTTATGAGTCCAGGGACAATATGGAGC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CAA 72 bp GGGATTCAGAACCATGTGATTGACAGTGTGATTTATTaGGGAAACGCCTTTGAGGGAGGGAATGAAACAGGA +
Preference number: 4 (lower is better)
Translates to: GIQNHVIDSVIY*GNAFEGGNETG
Trigger: TCCTGTTTCATTCCCTCCCTCAAAGGCGTTTCCCAAATAAATCACACTGTCAATCACATGGTTCTGAATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAAATCTGCTTCACTATaGGCTCCATATTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIKSASL*APYCPW
Trigger: CCAGGGACAATATGGAGCTCATAGTGAAGCAGATTT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGCTATCCAGCTTGCCTTaGAACTCACAGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPLSSLP*NSQPSP
Trigger: TGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAG...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTATTAGGCTAACGTACTaGAAAAAGATTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSIRLTY*KKISPH
Trigger: ATGTGGGGAAATCTTTTTTCAGTACGTTAGCCTAAT...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATGGTGTTCCTAAAGGCTaGGTTATAACTAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDGVPKG*VITKGF
Trigger: AAATCCTTTAGTTATAACTCAGCCTTTAGGAACACC...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTGTTTCAAGTGAAGACTaGATGTCAACTGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GEHEKISIIVGSPVFLKAVSSED*MSTAGF
Trigger: AAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAAC...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCGTTTCAAGTGAAGACTaGATGTCAACTGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCVSSED*MSTAGF
Trigger: AAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAAC...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAGAGAAGTGGTGGATTaGATAAGGCAGCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIREVVD*IRQQKH
Trigger: GTGTTTCTGCTGCCTTATTCAATCCACCACTTCTCT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCGGAGAACAAGAGCTGTaGGCACTTGCAGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLGEQEL*ALAAQT
Trigger: AGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCC...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCACAGTGGGGTTGACCTaGCACCTTTGTACCATGCCT +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLTVGLT*HLCTMP
Trigger: AGGCATGGTACAAAGGTGGCAGGTCAACCCCACTGT...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAACAGTGGGGTTGACCTaGCACCTTTGTACCATGCCT +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSTVGLT*HLCTMP
Trigger: AGGCATGGTACAAAGGTGGCAGGTCAACCCCACTGT...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAGCTGATGTCTGTGATTaGATCCAGATCCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAADVCD*IQIPFL
Trigger: CAGAAAAGGGATCTGGATGCAATCACAGACATCAGC...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTTACTTCTTTTGTCACTaGATCTCTGGGATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GEHEKISIIVGSPVFLKAYFFCH*ISGISP
Trigger: GGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTA...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCGCTTTCTATCCAGCTTaGCTTGAAACTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFAFYPA*LETHSL
Trigger: AAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGC...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAGCTTTCTATCCAGCTTaGCTTGAAACTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAAFYPA*LETHSL
Trigger: AAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGC...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAGACTGAATGTCAACTaGAGGCTTTCCGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIRLNVN*RLSEFL
Trigger: GAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAAAACGGCCTGAGCAGTaGCCAAGAGCACTCACTCAC +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIKRPEQ*PRALTH
Trigger: GTGAGTGAGTGCTCTTGGGCACTGCTCAGGCCGTTT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp AGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAGATTTCTCCCTGAAGTaGCGTTTTAGGTGTTCGATC +
Preference number: 4 (lower is better)
Translates to: SVSFEFQVKTECQLQAFRDFSLK*RFRCSI
Trigger: GATCGAACACCTAAAACGCCACTTCAGGGAGAAATC...TCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGATTTCTCCCTGAAGTaGCGTTTTAGGTGTTCGATC +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIDFSLK*RFRCSI
Trigger: GATCGAACACCTAAAACGCCACTTCAGGGAGAAATC...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCGGATCTGTCCTCTCATaGCTTCTCAGGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLGSVLS*LLRCLK
Trigger: CTTTAAACACCTGAGAAGCCATGAGAGGACAGATCC...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAAAATTAGCCACTCATaGTGGCATGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIKISHS*WHVPVV
Trigger: GACTACAGGCACATGCCACCATGAGTGGCTAATTTT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAAAAATTAGCCACTCATaGTGGCATGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWAKISHS*WHVPVV
Trigger: GACTACAGGCACATGCCACCATGAGTGGCTAATTTT...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATATGGGCTAGAGTGCAGTaGCGTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIWARVQ*RDLSSL
Trigger: CAGTGAGCTGAGATCACGCCACTGCACTCTAGCCCA...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR CAA 72 bp TTTCATGGGAATTCCCTGCTTTCTATCCAGCTTGCCTaGAAACTCACAGCCTTCTCCAAAATCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: FHGNSLLSIQLA*KLTAFSKILNL
Trigger: CAAGTTCAAGATTTTGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGCAGGGAATTCCCATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAGGTACTGGAAGTGCCTaGAGCGCTGGTAAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSGTGSA*SAGKKS
Trigger: AGACTTTTTACCAGCGCTTCAGGCACTTCCAGTACC...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATGGCGCCACCCAGTGTaGTTCAGAGTCATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLWRHPV*FRVIRN
Trigger: ATTTCTGATGACTCTGAATCACACTGGGTGGCGCCA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATGGATGCGCCGATGCTaGATAAAGTTTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLWMRRC*IKFEAW
Trigger: CCAAGCCTCAAACTTTATTCAGCATCGGCGCATCCA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGCTATCCAGCTTGCCTTaGAACTCACAGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLLSSLP*NSQPSP
Trigger: TGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAG...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGATGCTGAATGAGGTCTaGGCTATAACCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQMLNEV*AITKGF
Trigger: AAAGCCTTTGGTTATAGCTCAGACCTCATTCAGCAT...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTCGCTGGAAAAATGCTTaGAGTTGTTACTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GEHEKISIIVGSPVFLKARWKNA*SCYFAH
Trigger: ATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCG...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTACCAAGAAGGTCCTCTaGCACACACTTGGCATTAAA +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPTKKVL*HTLGIK
Trigger: TTTAATGCCAAGTGTGTGTCAGAGGACCTTCTTGGT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGATGAAAAGGTCTTCCTaGTCCTGGGAAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPMKRSS*SWEVSA
Trigger: AGCTGAGACTTCCCAGGAGCAGGAAGACCTTTTCAT...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGTTCTGGGAAGGATTCTaGCTTGATTTCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPFWEGF*LDFPTV
Trigger: CACTGTGGGGAAATCAAGGCAGAATCCTTCCCAGAA...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCTCGCCATGTGTGCTTTaGTTAGGGCTGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLSPCVL*LGLMSV
Trigger: CACAGACATCAGCCCTAAGCAAAGCACACATGGCGA...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAAGGTGTTCGATCAGATaGGAATGGCGACCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSRCSIR*EWRPKF
Trigger: GAACTTCGGTCGCCATTCGCATCTGATCGAACACCT...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTAGACTGAATGTCAACTaGAGGCTTTCCGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPRLNVN*RLSEFL
Trigger: GAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTACACTTTCAGTAGCATaGAACCTACTGATGTATTGG +
Preference number: 4 (lower is better)
Translates to: GEHEKISIIVGSPVFLKATLSVA*NLLMYW
Trigger: CCAATACATCAGTAGGTTGCATGCTACTGAAAGTGT...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAGACTTCTGCAAAGTCTaGATCCTGAGGAACGCTCCT +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSDFCKV*ILRNAP
Trigger: AGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTC...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCGACTTCTGCAAAGTCTaGATCCTGAGGAACGCTCCT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLDFCKV*ILRNAP
Trigger: AGGAGCGTTCCTCAGGATCCAGACTTTGCAGAAGTC...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATCGATCAGATGCGAATaGCGACCGAAGTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLSIRCE*RPKFFP
Trigger: TGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGACCATGTCCATCCATaGATTCTCTTCTTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQDHVHP*ILFLSR
Trigger: TCTAGACAAGAAGAGAATCCATGGATGGACATGGTC...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAATTAGCCACTCATGGTaGCATGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSISHSW*HVPVVP
Trigger: TGGGACTACAGGCACATGCCACCATGAGTGGCTAAT...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATACGGGTTTCACCATGTTaGTTGGCCAGGATGGTTTCG +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIRVSPC*LARMVS
Trigger: CGAAACCATCCTGGCCAACCAACATGGTGAAACCCG...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
3UTR CAA 72 bp GATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTaGCTCATTATAGGAGTATGGTTTCCCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DGNAGKMLEVVT*LIIGVWFPSRK
Trigger: CTTCCTGGAGGGAAACCATACTCCTATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCTTCCACCTTCACTATaGAAAGGTCTTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLLPPSL*KGLPAP
Trigger: AGGAGCAGGAAGACCTTTTCATAGTGAAGGTGGAAG...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATCTGGGATTTCTCCCTaGAGTGGCGTTTTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLSGISP*SGVLGV
Trigger: AACACCTAAAACGCCACTTCAGGGAGAAATCCCAGA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCATTAGGCTAACGTACTaGAAAAAGATTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCIRLTY*KKISPH
Trigger: ATGTGGGGAAATCTTTTTTCAGTACGTTAGCCTAAT...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCATGTTGATTAAGATGTaGCTTCAGAGTGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFMLIKM*LQSEAS
Trigger: AGAGGCTTCACTCTGAAGTCACATCTTAATCAACAT...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTATGTTGATTAAGATGTaGCTTCAGAGTGAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIMLIKM*LQSEAS
Trigger: AGAGGCTTCACTCTGAAGTCACATCTTAATCAACAT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGCGCTGGAAAAATGCTTaGAGTTGTTACTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQRWKNA*SCYFAH
Trigger: ATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCG...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAAAGCTTACTTCTACTaGACTCATGAAGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIKAYFY*THEAVP
Trigger: AGGAACAGCTTCATGAGTTCAGTAGAAGTAAGCTTT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGTCAGAACCATGTGATTaGCAGTGTGATTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQSEPCD*QCDLFG
Trigger: CCCAAATAAATCACACTGTCAATCACATGGTTCTGA...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGTCTTCAAGGATTCAGTaGCTTTCAGCAAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLSSRIQ*LSARAT
Trigger: GGTGGCTCTTGCTGAAAGTCACTGAATCCTTGAAGA...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGCTGGCTGTGTTACACTaGAACAATTGTTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQLAVLH*NNCFSA
Trigger: AGCAGAAAAACAATTGTTTCAGTGTAACACAGCCAG...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCCAACAATCTGCTGTCTaGGTTCCTCAAGTTCTCGCT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLQQSAV*VPQVLA
Trigger: AGCGAGAACTTGAGGAACGCAGACAGCAGATTGTTG...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGAGTCATCAGAAATCTaGTTCACTATGAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQESSEI*FTMSSI
Trigger: TATGGAGCTCATAGTGAAGCAGATTTCTGATGACTC...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCTTCTGGGAAGGATTCTaGCTTGATTTCCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLFWEGF*LDFPTV
Trigger: CACTGTGGGGAAATCAAGGCAGAATCCTTCCCAGAA...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGCTGATGTCTGTGATTaGATCCAGATCCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPADVCD*IQIPFL
Trigger: CAGAAAAGGGATCTGGATGCAATCACAGACATCAGC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAAGGTGTTCGATCAGATaGGAATGGCGACCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIRCSIR*EWRPKF
Trigger: GAACTTCGGTCGCCATTCGCATCTGATCGAACACCT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTCAAGTTCCAACTATATaGTTCCTCACAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIQVPTI*FLTDAI
Trigger: AATGGCATCTGTGAGGAAGCATATAGTTGGAACTTG...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTAGGCATGCGCCACTATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPRHAPL*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATAGTGGCGCATGCCT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGATTTCTCCCTGAAGTaGCGTTTTAGGTGTTCGATC +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPDFSLK*RFRCSI
Trigger: GATCGAACACCTAAAACGCCACTTCAGGGAGAAATC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCTTGTCACTGCATCTCTaGGATTTCTCCCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLLSLHL*DFSLKW
Trigger: CCACTTCAGGGAGAAATCCCAGAGATGCAGTGACAA...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGACTCGTAATTCGCCTTaGTCCAACTCCTTCTATGGG +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLTRNSP*SNSFYG
Trigger: CCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGT...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTAACTCGTAATTCGCCTTaGTCCAACTCCTTCTATGGG +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLTRNSP*SNSFYG
Trigger: CCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGT...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTCACTTGGCATTAAATTaGTGGTTATTTGCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIHLALN*WLFALS
Trigger: TGACAGGGCAAATAACCACCAATTTAATGCCAAGTG...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAATTAGCAAAGACAGATaGCAAAGAGGTCATCTATAC +
Preference number: 4 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKISKDR*QRGHLY
Trigger: GTATAGATGACCTCTTTGCCATCTGTCTTTGCTAAT...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATACTTCCACCTTCACTATaGAAAGGTCTTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIILPPSL*KGLPAP
Trigger: AGGAGCAGGAAGACCTTTTCATAGTGAAGGTGGAAG...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCAAATCTGCTTCACTATaGGCTCCATATTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLKSASL*APYCPW
Trigger: CCAGGGACAATATGGAGCTCATAGTGAAGCAGATTT...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TCATTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCATGCTGAATAAAGTTTaGGGCTTGGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: SFLWVIQDQTVHNFACLLMLNKV*GLEEEF
Trigger: AAATTCTTCCTCCAAGCCTCAAACTTTATTCAGCAT...GAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR TCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATATCTGGGATTTCTCCCTaGAGTGGCGTTTTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIISGISP*SGVLGV
Trigger: AACACCTAAAACGCCACTTCAGGGAGAAATCCCAGA...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCATTAGGCTAACGTACTaGAAAAAGATTTCCCCACAT +
Preference number: 4 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFIRLTY*KKISPH
Trigger: ATGTGGGGAAATCTTTTTTCAGTACGTTAGCCTAAT...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGGTGTTCCTAAAGGCTaGGTTATAACTAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQGVPKG*VITKGF
Trigger: AAATCCTTTAGTTATAACTCAGCCTTTAGGAACACC...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAAAGTCTCAAACGTTaGCGGGTTGTACTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLKSLKR*RVVLLH
Trigger: ATGCAGGAGTACAACCCGCCAACGTTTGAGACTTTT...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAAAAGTCTCAAACGTTaGCGGGTTGTACTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLKSLKR*RVVLLH
Trigger: ATGCAGGAGTACAACCCGCCAACGTTTGAGACTTTT...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGATAAAGTTTGAGGCTTaGAGGAAGAATTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQIKFEA*RKNLPQ
Trigger: TTGTGGCAAATTCTTCCTCCAAGCCTCAAACTTTAT...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCGGATCTGTCCTCTCATaGCTTCTCAGGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLGSVLS*LLRCLK
Trigger: CTTTAAACACCTGAGAAGCCATGAGAGGACAGATCC...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAAACCTACTGATGTATTaGGCATCATTATTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKNLLMY*ASLLAK
Trigger: CTTTGCTAATAATGATGCCCAATACATCAGTAGGTT...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454175.1
3UTR CAA 72 bp ATGACATTGATGGGATTTTGTGCTGGAGTAGATTTTTaGATGTTGTTTGGTGTGGGAACACTGGCCAACATT +
Preference number: 4 (lower is better)
Translates to: MTLMGFCAGVDF*MLFGVGTLANI
Trigger: AATGTTGGCCAGTGTTCCCACACCAAACAACATCAAAAAATCTACTCCAGCACAAAATCCCATCAATGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGATGCTGAATGAGGTCTaGGCTATAACCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLMLNEV*AITKGF
Trigger: AAAGCCTTTGGTTATAGCTCAGACCTCATTCAGCAT...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATGCTGAATGAGGTCTaGGCTATAACCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLMLNEV*AITKGF
Trigger: AAAGCCTTTGGTTATAGCTCAGACCTCATTCAGCAT...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGTTCTGTAATGCTGAATaGGGTCTGAGCTATAACCAA +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPFCNAE*GLSYNQ
Trigger: TTGGTTATAGCTCAGACCTCATTCAGCATTACAGAA...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAGTTTCAAGTGAAGACTaGATGTCAACTGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSVSSED*MSTAGF
Trigger: AAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAAC...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGTATAATGGTCAAAACTaGGCCTGTTCTCTAAGCTAC +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPYNGQN*ACSLSY
Trigger: GTAGCTTAGAGAACAGGCTCAGTTTTGACCATTATA...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR GCA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTCCTGAACCTGAATTTTaGCAAAACAGAGATACTTTA +
Preference number: 4 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIPEPEF*QNRDTL
Trigger: TAAAGTATCTCTGTTTTGGCAAAATTCAGGTTCAGG...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTAATTTTCACCAACTTCTaGGACCCAGTTGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLIFTNF*DPVERS
Trigger: ACTTCTCTCAACTGGGTCCCAGAAGTTGGTGAAAAT...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS-3UTR CCA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTATAAAGTTTGAGGCTTaGAGGAAGAATTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPIKFEA*RKNLPQ
Trigger: TTGTGGCAAATTCTTCCTCCAAGCCTCAAACTTTAT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAGGATCTGTCCTCTCATaGCTTCTCAGGTGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIGSVLS*LLRCLK
Trigger: CTTTAAACACCTGAGAAGCCATGAGAGGACAGATCC...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCCTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLLIIGV*FPSRKV
Trigger: AACCTTCCTGGAGGGAAACCATACTCCTATAATGAG...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCACTCATTATAGGAGTATaGTTTCCCTCCAGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSLIIGV*FPSRKV
Trigger: AACCTTCCTGGAGGGAAACCATACTCCTATAATGAG...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAGACCATGTCCATCCATaGATTCTCTTCTTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSDHVHP*ILFLSR
Trigger: TCTAGACAAGAAGAGAATCCATGGATGGACATGGTC...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
3UTR CAA 72 bp ATTAAAAAGCTACCAAGAAGGTCCTCTGACACACACTaGGCATTAAATTGGTGGTTATTTGCCCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: IKKLPRRSSDTH*ALNWWLFALSF
Trigger: AAATGACAGGGCAAATAACCACCAATTTAATGCCAAGTGTGTGTCAGAGGACCTTCTTGGTAGCTTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGGTGTTCCTAAAGGCTaGGTTATAACTAAAGGATTT +
Preference number: 4 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPGVPKG*VITKGF
Trigger: AAATCCTTTAGTTATAACTCAGCCTTTAGGAACACC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCAAAGCTTACTTCTACTaGACTCATGAAGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLKAYFY*THEAVP
Trigger: AGGAACAGCTTCATGAGTTCAGTAGAAGTAAGCTTT...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATCAGAACCATGTGATTaGCAGTGTGATTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSSEPCD*QCDLFG
Trigger: CCCAAATAAATCACACTGTCAATCACATGGTTCTGA...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR TCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCCTGGCTGTGTTACACTaGAACAATTGTTTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLLAVLH*NNCFSA
Trigger: AGCAGAAAAACAATTGTTTCAGTGTAACACAGCCAG...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTACAAGTTCCAACTATATaGTTCCTCACAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLQVPTI*FLTDAI
Trigger: AATGGCATCTGTGAGGAAGCATATAGTTGGAACTTG...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAAGGCATGCGCCACTATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIRHAPL*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATAGTGGCGCATGCCT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAATTTTCACCAACTTCTaGGACCCAGTTGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIIFTNF*DPVERS
Trigger: ACTTCTCTCAACTGGGTCCCAGAAGTTGGTGAAAAT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS-3UTR CCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGCACTTGGCATTAAATTaGTGGTTATTTGCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLHLALN*WLFALS
Trigger: TGACAGGGCAAATAACCACCAATTTAATGCCAAGTG...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATATAAGGTACAGATCTaGACCTGGATTCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLYKVQI*TWIPQN
Trigger: ATTCTGAGGAATCCAGGTCCAGATCTGTACCTTATA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCATGCTGAATAAAGTTTaGGGCTTGGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLMLNKV*GLEEEF
Trigger: AAATTCTTCCTCCAAGCCTCAAACTTTATTCAGCAT...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATATTCTGTAATGCTGAATaGGGTCTGAGCTATAACCAA +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIFCNAE*GLSYNQ
Trigger: TTGGTTATAGCTCAGACCTCATTCAGCATTACAGAA...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAAAAGCTTACTTCTACTaGACTCATGAAGCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIKAYFY*THEAVP
Trigger: AGGAACAGCTTCATGAGTTCAGTAGAAGTAAGCTTT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCTCTTTAATATCTTCTaGAGGACACTTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLLFNIF*RTLSVA
Trigger: TGCTACTGAAAGTGTCCTTCAGAAGATATTAAAGAG...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAGAGTCATCAGAAATCTaGTTCACTATGAGCTCCATA +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIESSEI*FTMSSI
Trigger: TATGGAGCTCATAGTGAAGCAGATTTCTGATGACTC...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CCA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTAATAAAGTTTGAGGCTTaGAGGAAGAATTTGCCACAA +
Preference number: 4 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLIKFEA*RKNLPQ
Trigger: TTGTGGCAAATTCTTCCTCCAAGCCTCAAACTTTAT...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR TCA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAATGCTGAATAAAGTTTaGGGCTTGGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIMLNKV*GLEEEF
Trigger: AAATTCTTCCTCCAAGCCTCAAACTTTATTCAGCAT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR GCA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCCTGAACCTGAATTTTaGCAAAACAGAGATACTTTA +
Preference number: 4 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLPEPEF*QNRDTL
Trigger: TAAAGTATCTCTGTTTTGGCAAAATTCAGGTTCAGG...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR GCA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAAATTGGTGGTTATTTaGCCTGTCATTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLKLVVI*PVIFFS
Trigger: AGAGAAGAAAATGACAGGGCAAATAACCACCAATTT...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR GCA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAATTGGTGGTTATTTaGCCTGTCATTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLKLVVI*PVIFFS
Trigger: AGAGAAGAAAATGACAGGGCAAATAACCACCAATTT...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS GCA 90 bp GTGGCGCTTGCTCAGGCTGGGTGTCCACGGTCAGGGGATGGGGGCTaGAGGACTCCTGCACTGCTCCAGGTGTTGCCATCTTCCGAGGAA +
Preference number: 5 (lower is better)
Translates to: VALAQAGCPRSGDGG*RTPALLQVLPSSEE
Trigger: TTCCTCGGAAGATGGCAACACCTGGAGCAGTGCAGGAGTCCTGCAGCCCCCATCCCCTGACCGTGGACACCCAGCCTGAGCAAGCGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS GCA 90 bp TCAGGCTGGGTGTCCACGGTCAGGGGATGGGGGCTGCAGGACTCCTaGACTGCTCCAGGTGTTGCCATCTTCCGAGGAAGCACATCAGGG +
Preference number: 5 (lower is better)
Translates to: SGWVSTVRGWGLQDS*TAPGVAIFRGSTSG
Trigger: CCCTGATGTGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTGCAGGAGTCCTGCAGCCCCCATCCCCTGACCGTGGACACCCAGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS GCA 90 bp AGCTCTCCTGGAACATCAAGCTCCCCGCAGCCGAGGCTGGGAAGATaGGGTTCTTCCCACGGAGAGAAACCGAAGCCGACACTCCCCAAC +
Preference number: 5 (lower is better)
Translates to: SSPGTSSSPQPRLGR*GSSHGEKPKPTLPN
Trigger: GTTGGGGAGTGTCGGCTTCGGTTTCTCTCCGTGGGAAGAACCGCATCTTCCCAGCCTCGGCTGCGGGGAGCTTGATGTTCCAGGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS CCA 90 bp TCTAGGGGAGCTCTCCTGGAACATCAAGCTCCCCGCAGCCGAGGCTaGGAAGATGCGGTTCTTCCCACGGAGAGAAACCGAAGCCGACAC +
Preference number: 5 (lower is better)
Translates to: SRGALLEHQAPRSRG*EDAVLPTERNRSRH
Trigger: GTGTCGGCTTCGGTTTCTCTCCGTGGGAAGAACCGCATCTTCCCAGCCTCGGCTGCGGGGAGCTTGATGTTCCAGGAGAGCTCCCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTGCCACAATCGCTGCATCTGTGCCCTCTCTCGCCATGTGTGCTTTGCTTAGGGATGGGGGTCTCAGCTaGGTAGAGGGGACTGGACAG +
Preference number: 5 (lower is better)
Translates to: FATIAASVPSLAMCALLRDGGLS*VEGTGQ
Trigger: CTGTCCAGTCCCCTCTACCAAGCTGAGACCCCCATC...CCTAAGCAAAGCACACATGGCGAGAGAGGGCACAGATGCAGCGATTGTGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATGCACTGCTCCAGGTGTaGCCATCTTCCGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNALLQV*PSSEEA
Trigger: TGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTGC...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS CCA 90 bp ACCAACTTCTGGGACCCAGTTGAGAGAAGTGAAGCTGTCAGCTCCTaGCTGTCCTTCAGGGGAAGGGAAGGAACTTGGAGAACAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TNFWDPVERSEAVSS*LSFRGREGTWRTGR
Trigger: CCTTCCTGTTCTCCAAGTTCCTTCCCTTCCCCTGAAGGACAGCCAGGAGCTGACAGCTTCACTTCTCTCAACTGGGTCCCAGAAGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS CCA 90 bp CTCATAACCTGGGACCCAGTTGAGAGAAGTGAAGCTGTCAGCTCCTaGCTGTCCTTCAGGGGAAGGGAAGGAACTTGGAGAACAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LITWDPVERSEAVSS*LSFRGREGTWRTGR
Trigger: CCTTCCTGTTCTCCAAGTTCCTTCCCTTCCCCTGAAGGACAGCCAGGAGCTGACAGCTTCACTTCTCTCAACTGGGTCCCAGGTTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CAA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTGGCTGTGTTACACTCTaGACCACCGCAGTCGGCTCA +
Preference number: 5 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGGCVTL*TTAVGS
Trigger: TGAGCCGACTGCGGTGGTCAAGAGTGTAACACAGCC...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326775.10
CDS-3UTR CAA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGTCAAACGTTGGCGGGTaGTACTCCTGCATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGSNVGG*YSCIQV
Trigger: CACCTGGATGCAGGAGTACAACCCGCCAACGTTTGA...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCGCACTGCTCCAGGTGTaGCCATCTTCCGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHAALLQV*PSSEEA
Trigger: TGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTGC...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCCTCGCCATGTGTGCTTaGCTTAGGGCTGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSLAMCA*LRADVC
Trigger: ACAGACATCAGCCCTAAGCAAAGCACACATGGCGAG...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS TCA 90 bp GTTTATAAGGTACAGATCTGGACCTGGATTCCTCAGAATGGCCCCTaGCCCCGAGATACAGAGACTGTGGCCCGGTCAAGGTTAGGGACA +
Preference number: 5 (lower is better)
Translates to: VYKVQIWTWIPQNGP*PRDTETVARSRLGT
Trigger: TGTCCCTAACCTTGACCGGGCCACAGTCTCTGTATCTCGGGGTCAGGGGCCATTCTGAGGAATCCAGGTCCAGATCTGTACCTTATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CAA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCGTTGACCTGCCACCTTaGTACCATGCCTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSVDLPP*YHAFKV
Trigger: GACCTTAAAGGCATGGTACAAAGGTGGCAGGTCAAC...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGCTCGCCATGTGTGCTTaGCTTAGGGCTGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGLAMCA*LRADVC
Trigger: ACAGACATCAGCCCTAAGCAAAGCACACATGGCGAG...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTCTATCCAGCTTGCCTaGAAACTCACAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VSTHTAGTRTRNSPWSNSSIQLA*KLTAFS
Trigger: GGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGA...GGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp CCCTGGAGTTTTCTCCGCTTTAATCAAATGAACCAGGTGTTGGGGTGTAGAGAGGCACTGCTCCAGGTGTaGCCATCTTCCGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PWSFLRFNQMNQVLGCREALLQV*PSSEEA
Trigger: TGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTGC...CTCTCTACACCCCAACACCTGGTTCATTTGATTAAAGCGGAGAAAACTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTAAGAGCTGTGAGCACTaGCAGCCCAAACTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFKSCEH*QPKLRA
Trigger: TGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTT...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGCAAATGAACCAGGTGTaGGGGTGTAGAGAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGQMNQV*GCREEV
Trigger: CACTTCCTCTCTACACCCCAACACCTGGTTCATTTG...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS CCA 90 bp ATGGTACTGGAAGTGCCTGAAGCGCTGGTAAAAAGTCTCAAACGTTaGCGGGTTGTACTCCTGCATCCAGGTGCAGTCTTCTTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: MVLEVPEALVKSLKR*RVVLLHPGAVFFFH
Trigger: GTGGAAGAAGAAGACTGCACCTGGATGCAGGAGTACAACCCGCCAACGTTTGAGACTTTTTACCAGCGCTTCAGGCACTTCCAGTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTTCAAACGTTGGCGGGTaGTACTCCTGCATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSSNVGG*YSCIQV
Trigger: CACCTGGATGCAGGAGTACAACCCGCCAACGTTTGA...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CATCCCAGTTCCCCACAAGTGAATGACTTAGTGACTGGACAGGTACCACATGCCACTTCTGGGACCCAGTaGAGAGAAGTGAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: HPSSPQVNDLVTGQVPHATSGTQ*REVKLS
Trigger: TGACAGCTTCACTTCTCTCAACTGGGTCCCAGAAGT...GGCATGTGGTACCTGTCCAGTCACTAAGTCATTCACTTGTGGGGAACTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326775.10
CDS-3UTR CAA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGGGAAGGATTCTGCCTaGATTTCCCCACAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSGKDSA*ISPQWG
Trigger: ACCCCACTGTGGGGAAATCAAGGCAGAATCCTTCCC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGCAGAGAAGTGGTGGATaGAATAAGGCAGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQQRSGG*NKAAET
Trigger: TGTTTCTGCTGCCTTATTCAATCCACCACTTCTCTG...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCGATGGGGGTCTCAGCTaGGTAGAGGGGACTGGACAG +
Preference number: 5 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCDGGLS*VEGTGQ
Trigger: CTGTCCAGTCCCCTCTACCAAGCTGAGACCCCCATC...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCAAGAGCTGTGAGCACTaGCAGCCCAAACTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFKSCEH*QPKLRA
Trigger: TGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTAGGTGGCTAGACCACTaGAGCCCGGGAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: VPSVSFEFQVKTECQLQARWLDH*SPGGQG
Trigger: GCCTTGACCTCCCGGGCTCAAGTGGTCTAGCCACCT...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp CAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCACTCGCCATGTGTGCTTaGCTTAGGGCTGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: QVKTECQLQAFRIPRPCPLAMCA*LRADVC
Trigger: ACAGACATCAGCCCTAAGCAAAGCACACATGGCGAG...TGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GGGCTAACAGGACCTCCTGCCTGCCTGCTCACGACTGATTACTTTCAATCCCAGGCTGGAGTAGATTTTTaGATGTTGTTTGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: GLTGPPACLLTTDYFQSQAGVDF*MLFGVG
Trigger: TCCCACACCAAACAACATCAAAAAATCTACTCCAGC...CTGGGATTGAAAGTAATCAGTCGTGAGCAGGCAGGCAGGAGGTCCTGTTAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATGCCACATTCATGACATaGATGGGATTTTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNATFMT*MGFCAG
Trigger: TCCAGCACAAAATCCCATCAATGTCATGAATGTGGC...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACGCCACATTCATGACATaGATGGGATTTTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: EVSTHTAGTRTRNSPWSNATFMT*MGFCAG
Trigger: TCCAGCACAAAATCCCATCAATGTCATGAATGTGGC...GTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TCCCAGCTATTCAGGAGGCTGAGGTGGCTAGACCACTTGAGCCCGGGAGGTCAACTTGAAGTTGTTACTTaGCTCATTATAGGAGTATGG +
Preference number: 5 (lower is better)
Translates to: SQLFRRLRWLDHLSPGGQLEVVT*LIIGVW
Trigger: CCATACTCCTATAATGAGCAAAGTAACAACTTCAAG...TTGACCTCCCGGGCTCAAGTGGTCTAGCCACCTCAGCCTCCTGAATAGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS TCA 90 bp ATCCTGAGGAACGCTCCTTTCGGTGTGTTCTGGCGCCACCCAGTGTaGTTCAGAGTCATCAGAAATCTGCTTCACTATGAGCTCCATATT +
Preference number: 5 (lower is better)
Translates to: ILRNAPFGVFWRHPV*FRVIRNLLHYELHI
Trigger: AATATGGAGCTCATAGTGAAGCAGATTTCTGATGACTCTGAATCACACTGGGTGGCGCCAGAACACACCGAAAGGAGCGTTCCTCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTGCTTGGAGGAAGAATTaGCCACAATCGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSAWRKN*PQSLHL
Trigger: CAGATGCAGCGATTGTGGCAAATTCTTCCTCCAAGC...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGAGAACAAGAGCTGTGAGCACTTGCAGCCCAAACTCAGAGCAGCTGGGGTGTTCTTACTTCTTTaGTCACTGCATCTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: FLENKSCEHLQPKLRAAGVFLLL*SLHLWD
Trigger: ATCCCAGAGATGCAGTGACAAAAGAAGTAAGAACAC...CCCAGCTGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTTGTTCTCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATGCTGGAGTAGATTTTTaGATGTTGTTTGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNAGVDF*MLFGVG
Trigger: TCCCACACCAAACAACATCAAAAAATCTACTCCAGC...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACATTTGGGAAACGCCTTaGAGGGAGGGAATGAAACAG +
Preference number: 5 (lower is better)
Translates to: SHLLRAILQFLENKSCEHIWETP*REGMKQ
Trigger: CTGTTTCATTCCCTCCCTCAAAGGCGTTTCCCAAAT...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCATTTGGGAAACGCCTTaGAGGGAGGGAATGAAACAG +
Preference number: 5 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFIWETP*REGMKQ
Trigger: CTGTTTCATTCCCTCCCTCAAAGGCGTTTCCCAAAT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTGTAGCATGCAACCTCTaGACCACCGCAGTCGGCTCA +
Preference number: 5 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAVACNL*TTAVGS
Trigger: TGAGCCGACTGCGGTGGTCAAGAGGTTGCATGCTAC...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451158.5
CDS-3UTR CAA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGTCAAACGTTGGCGGGTaGTACTCCTGCATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQSNVGG*YSCIQV
Trigger: CACCTGGATGCAGGAGTACAACCCGCCAACGTTTGA...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTAAAAAGTCTCAAACGTaGGCGGGTTGTACTCCTGCA +
Preference number: 5 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSKKSQT*AGCTPA
Trigger: TGCAGGAGTACAACCCGCCAACGTTTGAGACTTTTT...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCCCACACTCATAAAAAGTCTCAAACGTaGGCGGGTTGTACTCCTGCA +
Preference number: 5 (lower is better)
Translates to: VLGVRSDANGDRSSSHTHKKSQT*AGCTPA
Trigger: TGCAGGAGTACAACCCGCCAACGTTTGAGACTTTTT...ATGAGTGTGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTGGGAAGGATTCTGCCTaGATTTCCCCACAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAGKDSA*ISPQWG
Trigger: ACCCCACTGTGGGGAAATCAAGGCAGAATCCTTCCC...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp ATACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTGTGTTCTTACTTCTTTaGTCACTGCATCTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: ILLGPGLVIRLGPTPSMGVFLLL*SLHLWD
Trigger: ATCCCAGAGATGCAGTGACAAAAGAAGTAAGAACAC...ACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp ACTGCTGGGACCAGGACTCGTAATTCGCCTTGGTCCAACTCCTTCTATGGGTTTGCTGGAGTAGATTTTTaGATGTTGTTTGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: TAGTRTRNSPWSNSFYGFAGVDF*MLFGVG
Trigger: TCCCACACCAAACAACATCAAAAAATCTACTCCAGC...AAACCCATAGAAGGAGTTGGACCAAGGCGAATTACGAGTCCTGGTCCCAGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCAGGTGGCTAGACCACTaGAGCCCGGGAGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLRWLDH*SPGGQG
Trigger: GCCTTGACCTCCCGGGCTCAAGTGGTCTAGCCACCT...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTCTGGGGCACCCAGAAGTCAGCACACATACTGCTGGGACCAGGACTCGTAATTGTAACTCAATCTTCTaGTCTTCAATCACTGTCAAG +
Preference number: 5 (lower is better)
Translates to: FLGHPEVSTHTAGTRTRNCNSIF*SSITVK
Trigger: CTTGACAGTGATTGAAGACAAGAAGATTGAGTTACA...ATTACGAGTCCTGGTCCCAGCAGTATGTGTGCTGACTTCTGGGTGCCCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCGCTGGAGTAGATTTTTaGATGTTGTTTGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFAGVDF*MLFGVG
Trigger: TCCCACACCAAACAACATCAAAAAATCTACTCCAGC...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTGCCACATTCATGACATaGATGGGATTTTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSATFMT*MGFCAG
Trigger: TCCAGCACAAAATCCCATCAATGTCATGAATGTGGC...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCAGCCACATTCATGACATaGATGGGATTTTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: QVKTECQLQAFRIPRPCPATFMT*MGFCAG
Trigger: TCCAGCACAAAATCCCATCAATGTCATGAATGTGGC...TGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGGATGGGGGTCTCAGCTaGGTAGAGGGGACTGGACAG +
Preference number: 5 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLDGGLS*VEGTGQ
Trigger: CTGTCCAGTCCCCTCTACCAAGCTGAGACCCCCATC...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAAAAAAGTCTCAAACGTaGGCGGGTTGTACTCCTGCA +
Preference number: 5 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKKKSQT*AGCTPA
Trigger: TGCAGGAGTACAACCCGCCAACGTTTGAGACTTTTT...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
46% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCAGCACTGCTCCAGGTGTaGCCATCTTCCGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSALLQV*PSSEEA
Trigger: TGCTTCCTCGGAAGATGGCAACACCTGGAGCAGTGC...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTGTTGACCTGCCACCTTaGTACCATGCCTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAVDLPP*YHAFKV
Trigger: GACCTTAAAGGCATGGTACAAAGGTGGCAGGTCAAC...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGTTGACCTGCCACCTTaGTACCATGCCTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQVDLPP*YHAFKV
Trigger: GACCTTAAAGGCATGGTACAAAGGTGGCAGGTCAAC...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp AAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGGGAAGGATTCTGCCTaGATTTCCCCACAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: KAFLNGEHEKISIIVGSPGKDSA*ISPQWG
Trigger: ACCCCACTGTGGGGAAATCAAGGCAGAATCCTTCCC...CGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCTCGCCATGTGTGCTTaGCTTAGGGCTGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPLAMCA*LRADVC
Trigger: ACAGACATCAGCCCTAAGCAAAGCACACATGGCGAG...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGCTTGGAGGAAGAATTaGCCACAATCGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFIAWRKN*PQSLHL
Trigger: CAGATGCAGCGATTGTGGCAAATTCTTCCTCCAAGC...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATGTGTTCTTACTTCTTTaGTCACTGCATCTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDVFLLL*SLHLWD
Trigger: ATCCCAGAGATGCAGTGACAAAAGAAGTAAGAACAC...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCTCTATCCAGCTTGCCTaGAAACTCACAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFSIQLA*KLTAFS
Trigger: GGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGA...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCACTTGAAGTTGTTACTTaGCTCATTATAGGAGTATGG +
Preference number: 5 (lower is better)
Translates to: FIVSQASQQKRPEQCPRALEVVT*LIIGVW
Trigger: CCATACTCCTATAATGAGCAAAGTAACAACTTCAAG...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACTCTAGAAAAGGTTCATaGCTGAGGTACCAAAACAGA +
Preference number: 5 (lower is better)
Translates to: SHLLRAILQFLENKSCEHSRKGS*LRYQNR
Trigger: TCTGTTTTGGTACCTCAGCAATGAACCTTTTCTAGA...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTAAGAGCTGTGAGCACTaGCAGCCCAAACTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPKSCEH*QPKLRA
Trigger: TGCTCTGAGTTTGGGCTGCAAGTGCTCACAGCTCTT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTCAAATGAACCAGGTGTaGGGGTGTAGAGAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAQMNQV*GCREEV
Trigger: CACTTCCTCTCTACACCCCAACACCTGGTTCATTTG...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTATTGTAAGCCAGGCAAGTCAGCAGAAACGGCCTGAGCAGTGCCCAAGAGCATCTTTATTTTCCTGTTaGTCCCAAACCTCTACAAGT +
Preference number: 5 (lower is better)
Translates to: FIVSQASQQKRPEQCPRASLFSC*SQTSTS
Trigger: ACTTGTAGAGGTTTGGGACAAACAGGAAAATAAAGA...TGCTCTTGGGCACTGCTCAGGCCGTTTCTGCTGACTTGCCTGGCTTACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTTTAGGTGTTCGATCAGATGCGAATGGCGACCGAAGTTCTTCCCACACTCATTCCTCTGACACACACTaGGCATTAAATTGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: VLGVRSDANGDRSSSHTHSSDTH*ALNWWL
Trigger: TAACCACCAATTTAATGCCAAGTGTGTGTCAGAGGA...ATGAGTGTGGGAAGAACTTCGGTCGCCATTCGCATCTGATCGAACACCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCTCAAACGTTGGCGGGTaGTACTCCTGCATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLSNVGG*YSCIQV
Trigger: CACCTGGATGCAGGAGTACAACCCGCCAACGTTTGA...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTACTTCTGGGACCCAGTaGAGAGAAGTGAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPTSGTQ*REVKLS
Trigger: TGACAGCTTCACTTCTCTCAACTGGGTCCCAGAAGT...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS-3UTR CAA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTGTTGACCTGCCACCTTaGTACCATGCCTTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPVDLPP*YHAFKV
Trigger: GACCTTAAAGGCATGGTACAAAGGTGGCAGGTCAAC...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGGGGAAGGATTCTGCCTaGATTTCCCCACAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLGKDSA*ISPQWG
Trigger: ACCCCACTGTGGGGAAATCAAGGCAGAATCCTTCCC...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTGCTTGGAGGAAGAATTaGCCACAATCGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPAWRKN*PQSLHL
Trigger: CAGATGCAGCGATTGTGGCAAATTCTTCCTCCAAGC...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TCTCATCTCCTGAGGGCAATTCTCCAGTTTCTGGAGAACAAGAGCTGTGAGCACGCCTTCTCCAAAATCTaGAACTTGAGAAACATTTCT +
Preference number: 5 (lower is better)
Translates to: SHLLRAILQFLENKSCEHAFSKI*NLRNIS
Trigger: AGAAATGTTTCTCAAGTTCAAGATTTTGGAGAAGGC...GTGCTCACAGCTCTTGTTCTCCAGAAACTGGAGAATTGCCCTCAGGAGATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTACGCTGGAAAAATGCTaGAAGTTGTTACTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: ECQLQAFRIPRPCPSMDSTLEKC*KLLLCS
Trigger: TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGT...AGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCAACCTATTTGTGAGTTaGATGGTAACGCTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: VNCRLSEFLDHVHPWILFNLFVS*MVTLEK
Trigger: TTTTTCCAGCGTTACCATCAAACTCACAAATAGGTT...GAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp ACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: TECQLQAFRIPRPCPSMDKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...ATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGACATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TCAACTGCAGGCTTTCCGAATTCCTCGACCATGTCCATCCATGGATTCTCTTCTTCTAGAAAAGGTTCATaGCTGAGGTACCAAAACAGA +
Preference number: 5 (lower is better)
Translates to: STAGFPNSSTMSIHGFSSSRKGS*LRYQNR
Trigger: TCTGTTTTGGTACCTCAGCAATGAACCTTTTCTAGA...AGAAGAGAATCCATGGATGGACATGGTCGAGGAATTCGGAAAGCCTGCAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTGTGTTCTTACTTCTTTaGTCACTGCATCTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: GEHEKISIIVGSPVFLKAVFLLL*SLHLWD
Trigger: ATCCCAGAGATGCAGTGACAAAAGAAGTAAGAACAC...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GCTGTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGCAGAGAAGTGGTGGATaGAATAAGGCAGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: AVPSVSFEFQVKTECQLQQRSGG*NKAAET
Trigger: TGTTTCTGCTGCCTTATTCAATCCACCACTTCTCTG...CTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCACTTCTGGGACCCAGTaGAGAGAAGTGAAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLTSGTQ*REVKLS
Trigger: TGACAGCTTCACTTCTCTCAACTGGGTCCCAGAAGT...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS-3UTR CAA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCGCTTGGAGGAAGAATTaGCCACAATCGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLAWRKN*PQSLHL
Trigger: CAGATGCAGCGATTGTGGCAAATTCTTCCTCCAAGC...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATCTATCCAGCTTGCCTaGAAACTCACAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLSIQLA*KLTAFS
Trigger: GGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp ATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCTCTATCCAGCTTGCCTaGAAACTCACAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ICEFDGNAGKMLEVVTLLSIQLA*KLTAFS
Trigger: GGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGA...GAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCACAAATGAACCAGGTGTaGGGGTGTAGAGAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: FVSLMVTLEKCLKLLLCSQMNQV*GCREEV
Trigger: CACTTCCTCTCTACACCCCAACACCTGGTTCATTTG...TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCACACTTGGCATTAAATaGGTGGTTATTTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFTLGIK*VVICPV
Trigger: GACAGGGCAAATAACCACCAATTTAATGCCAAGTGT...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCATCCTCTGACACACACTaGGCATTAAATTGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWASSDTH*ALNWWL
Trigger: TAACCACCAATTTAATGCCAAGTGTGTGTCAGAGGA...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp AATAAGGCAGCAGAAACACATACCATCCAGCCCCTGAACCTGAATTTTGCCAAAGCCTTCTCCAAAATCTaGAACTTGAGAAACATTTCT +
Preference number: 5 (lower is better)
Translates to: NKAAETHTIQPLNLNFAKAFSKI*NLRNIS
Trigger: AGAAATGTTTCTCAAGTTCAAGATTTTGGAGAAGGC...TTTGGCAAAATTCAGGTTCAGGGGCTGGATGGTATGTGTTTCTGCTGCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp TTCCTGTGGGTAATACAAGATCAAACAGTCCACAACTTTGCCTGTCTTCTCTGCGCCTTCTCCAAAATCTaGAACTTGAGAAACATTTCT +
Preference number: 5 (lower is better)
Translates to: FLWVIQDQTVHNFACLLCAFSKI*NLRNIS
Trigger: AGAAATGTTTCTCAAGTTCAAGATTTTGGAGAAGGC...GCAGAGAAGACAGGCAAAGTTGTGGACTGTTTGATCTTGTATTACCCACAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCCGGTGTTCCTAAAGGCTTGTAACTCAATCTTCTaGTCTTCAATCACTGTCAAG +
Preference number: 5 (lower is better)
Translates to: GEHEKISIIVGSPVFLKACNSIF*SSITVK
Trigger: CTTGACAGTGATTGAAGACAAGAAGATTGAGTTACA...AGCCTTTAGGAACACCGGAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp TGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTGGGCAACGCTGGAAAAATGCTaGAAGTTGTTACTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: WTGHHSVQHIWSTNIYWATLEKC*KLLLCS
Trigger: TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGT...TGCCCAATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp CCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCACGCTGGAAAAATGCTaGAAGTTGTTACTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: PSVSFEFQVKTECQLQAFTLEKC*KLLLCS
Trigger: TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGT...GAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTACGCTGGAAAAATGCTaGAAGTTGTTACTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFITLEKC*KLLLCS
Trigger: TGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: VPSVSFEFQVKTECQLQAKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAAAAAAGTCTCAAACGTaGGCGGGTTGTACTCCTGCA +
Preference number: 5 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIKKSQT*AGCTPA
Trigger: TGCAGGAGTACAACCCGCCAACGTTTGAGACTTTTT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GGGACTGGACAGGGCACCACAGTGTACAACACATATGGTCAACAAATATTTATTAACCTATTTGTGAGTTaGATGGTAACGCTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: GTGQGTTVYNTYGQQIFINLFVS*MVTLEK
Trigger: TTTTTCCAGCGTTACCATCAAACTCACAAATAGGTT...AATAAATATTTGTTGACCATATGTGTTGTACACTGTGGTGCCCTGTCCAGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGCAGAGAAGTGGTGGATaGAATAAGGCAGCAGAAACA +
Preference number: 5 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLQRSGG*NKAAET
Trigger: TGTTTCTGCTGCCTTATTCAATCCACCACTTCTCTG...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTTCCTAGTGTCAGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTCTTTATTTTCCTGTTaGTCCCAAACCTCTACAAGT +
Preference number: 5 (lower is better)
Translates to: VPSVSFEFQVKTECQLQASLFSC*SQTSTS
Trigger: ACTTGTAGAGGTTTGGGACAAACAGGAAAATAAAGA...AGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACTGACACTAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp AGTTTTGAGTTTCAAGTGAAGACTGAATGTCAACTGCAGGCTTTCCGAATTCCTCTTGAAGTTGTTACTTaGCTCATTATAGGAGTATGG +
Preference number: 5 (lower is better)
Translates to: SFEFQVKTECQLQAFRIPLEVVT*LIIGVW
Trigger: CCATACTCCTATAATGAGCAAAGTAACAACTTCAAG...AGGAATTCGGAAAGCCTGCAGTTGACATTCAGTCTTCACTTGAAACTCAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGACACTTGGCATTAAATaGGTGGTTATTTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLTLGIK*VVICPV
Trigger: GACAGGGCAAATAACCACCAATTTAATGCCAAGTGT...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326775.10
ENST00000454175.1
CDS-3UTR CAA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATCTAGAAAAGGTTCATaGCTGAGGTACCAAAACAGA +
Preference number: 5 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLSRKGS*LRYQNR
Trigger: TCTGTTTTGGTACCTCAGCAATGAACCTTTTCTAGA...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000454175.1
CDS-3UTR CAA 90 bp GTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTAGCCTTCTCCAAAATCTaGAACTTGAGAAACATTTCT +
Preference number: 5 (lower is better)
Translates to: VSLMVTLEKCLKLLLCSLAFSKI*NLRNIS
Trigger: AGAAATGTTTCTCAAGTTCAAGATTTTGGAGAAGGC...TAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGCATTTCTCAATGGGGAACACGAAAAGATTTCTATTATTGTGGGTTCTCTGTAACTCAATCTTCTaGTCTTCAATCACTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LKHFSMGNTKRFLLLWVLCNSIF*SSITVK
Trigger: CTTGACAGTGATTGAAGACAAGAAGATTGAGTTACA...GAGAACCCACAATAATAGAAATCTTTTCGTGTTCCCCATTGAGAAATGCTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGCTTGAAGTTGTTACTTaGCTCATTATAGGAGTATGG +
Preference number: 5 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLLEVVT*LIIGVW
Trigger: CCATACTCCTATAATGAGCAAAGTAACAACTTCAAG...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp CTAAAGGATTTCAACCTATTTGTGAGTTTGATGGTAACGCTGGAAAAATGCTTGAACCTATTTGTGAGTTaGATGGTAACGCTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LKDFNLFVSLMVTLEKCLNLFVS*MVTLEK
Trigger: TTTTTCCAGCGTTACCATCAAACTCACAAATAGGTT...CAAGCATTTTTCCAGCGTTACCATCAAACTCACAAATAGGTTGAAATCCTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATAAAAAGATTTCTATTATaGTGGGTTCTCCGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIIKRFLL*WVLRCS
Trigger: GGAACACCGGAGAACCCACAATAATAGAAATCTTTT...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS-3UTR CAA 90 bp GAGTTTGATGGTAACGCTGGAAAAATGCTTGAAGTTGTTACTTTGCTCATTATATGTAACTCAATCTTCTaGTCTTCAATCACTGTCAAG +
Preference number: 5 (lower is better)
Translates to: EFDGNAGKMLEVVTLLIICNSIF*SSITVK
Trigger: CTTGACAGTGATTGAAGACAAGAAGATTGAGTTACA...TATAATGAGCAAAGTAACAACTTCAAGCATTTTTCCAGCGTTACCATCAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS TCA 72 bp ATGGGACGCGGGCCCCGAGTCCCAGCCCACCCTCAGTaGCTCGGACGTCTCCAGGGCCCCCGAAGCCGCTCG +
Preference number: 6 (lower is better)
Translates to: MGRGPRVPAHPQ*LGRLQGPRSRS
Trigger: CGAGCGGCTTCGGGGGCCCTGGAGACGTCCGAGTCACTGAGGGTGGGCTGGGACTCGGGGCCCGCGTCCCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394170.6
CDS CCA 72 bp AGGAAGGGCATTTTCCTCCAGGAGACGAGGCTTCTGTaGCGCTTGCTCAGGCTGGGTGTCCACGGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: RKGIFLQETRLL*RLLRLGVHGQG
Trigger: CCCCTGACCGTGGACACCCAGCCTGAGCAAGCGCCACAGAAGCCTCGTCTCCTGGAGGAAAATGCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS GCA 72 bp GGAACATCAAGCTCCCCGCAGCCGAGGCTGGGAAGATaGGGTTCTTCCCACGGAGAGAAACCGAAGCCGACA +
Preference number: 6 (lower is better)
Translates to: GTSSSPQPRLGR*GSSHGEKPKPT
Trigger: TGTCGGCTTCGGTTTCTCTCCGTGGGAAGAACCGCATCTTCCCAGCCTCGGCTGCGGGGAGCTTGATGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS CCA 72 bp GCTCTCCTGGAACATCAAGCTCCCCGCAGCCGAGGCTaGGAAGATGCGGTTCTTCCCACGGAGAGAAACCGA +
Preference number: 6 (lower is better)
Translates to: ALLEHQAPRSRG*EDAVLPTERNR
Trigger: TCGGTTTCTCTCCGTGGGAAGAACCGCATCTTCCCAGCCTCGGCTGCGGGGAGCTTGATGTTCCAGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS GCA 72 bp CCAAAGCGGGGAGGCAAACGGAGCCACTCTCTCCCCTaGTCCATCCCAAAGCCATTCAAACAGCCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: PKRGGKRSHSLP*SIPKPFKQPKL
Trigger: GAGCTTGGGCTGTTTGAATGGCTTTGGGATGGAGCAGGGGAGAGAGTGGCTCCGTTTGCCTCCCCGCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394170.6
CDS TCA 72 bp GTACAGATCTGGACCTGGATTCCTCAGAATGGCCCCTaGCCCCGAGATACAGAGACTGTGGCCCGGTCAAGG +
Preference number: 6 (lower is better)
Translates to: VQIWTWIPQNGP*PRDTETVARSR
Trigger: CCTTGACCGGGCCACAGTCTCTGTATCTCGGGGTCAGGGGCCATTCTGAGGAATCCAGGTCCAGATCTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS TCA 72 bp CCCGGGGTCCTGAAGCCTCATGGTACTGGAAGTGCCTaGAGCGCTGGTAAAAAGTCTCAAACGTTGGCGGGT +
Preference number: 6 (lower is better)
Translates to: PGVLKPHGTGSA*SAGKKSQTLAG
Trigger: ACCCGCCAACGTTTGAGACTTTTTACCAGCGCTTCAGGCACTTCCAGTACCATGAGGCTTCAGGACCCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS CCA 72 bp GAAGTGCCTGAAGCGCTGGTAAAAAGTCTCAAACGTTaGCGGGTTGTACTCCTGCATCCAGGTGCAGTCTTC +
Preference number: 6 (lower is better)
Translates to: EVPEALVKSLKR*RVVLLHPGAVF
Trigger: GAAGACTGCACCTGGATGCAGGAGTACAACCCGCCAACGTTTGAGACTTTTTACCAGCGCTTCAGGCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS TCA 72 bp AACGCTCCTTTCGGTGTGTTCTGGCGCCACCCAGTGTaGTTCAGAGTCATCAGAAATCTGCTTCACTATGAG +
Preference number: 6 (lower is better)
Translates to: NAPFGVFWRHPV*FRVIRNLLHYE
Trigger: CTCATAGTGAAGCAGATTTCTGATGACTCTGAATCACACTGGGTGGCGCCAGAACACACCGAAAGGAGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
ENST00000454175.1
CDS TCA 72 bp AGTGTGATTCAGAGTCATCAGAAATCTGCTTCACTATaGGCTCCATATTGTCCCTGGACTCATAACCCATGG +
Preference number: 6 (lower is better)
Translates to: SVIQSHQKSASL*APYCPWTHNPW
Trigger: CCATGGGTTATGAGTCCAGGGACAATATGGAGCTCATAGTGAAGCAGATTTCTGATGACTCTGAATCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326775.10
ENST00000394170.6
ENST00000451158.5
CDS TCA 72 bp AGTGTGATTCAGAGTCATCAGAAATCTGCTTCACTATaGGCTCCATATTGTCCCTGGACTCATAACCTGGGA +
Preference number: 6 (lower is better)
Translates to: SVIQSHQKSASL*APYCPWTHNLG
Trigger: TCCCAGGTTATGAGTCCAGGGACAATATGGAGCTCATAGTGAAGCAGATTTCTGATGACTCTGAATCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS TCA 72 bp CGGAATAAGGGTGAAAATCATTATAATGGTCAAAACTaGGCCTGTTCTCTAAGCTACAAGAGCTTGACAGGC +
Preference number: 6 (lower is better)
Translates to: RNKGENHYNGQN*ACSLSYKSLTG
Trigger: GCCTGTCAAGCTCTTGTAGCTTAGAGAACAGGCTCAGTTTTGACCATTATAATGATTTTCACCCTTATTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS CCA 72 bp AGGACACTTTCAGTAGCATGCAACCTACTGATGTATTaGGCATCATTATTAGCAAAGACAGATGGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: RTLSVACNLLMY*ASLLAKTDGKE
Trigger: CTCTTTGCCATCTGTCTTTGCTAATAATGATGCCCAATACATCAGTAGGTTGCATGCTACTGAAAGTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1
CDS CAA 90 bp TATCTTCTGAAGGACACTTTCAGTAGCATGCAACCTACTGATGTATaGGGCATCATTATTAGCAAAGACAGATGGCAAAGAGGTCATCTA +
Preference number: 6 (lower is better)
Translates to: YLLKDTFSSMQPTDV*GIIISKDRWQRGHL
Trigger: TAGATGACCTCTTTGCCATCTGTCTTTGCTAATAATGATGCCCAATACATCAGTAGGTTGCATGCTACTGAAAGTGTCCTTCAGAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454175.1