Pregenerated sensors for ZKSCAN4 (Homo sapiens)
Ensembl gene IDs: ENSG00000187626Ensembl transcript IDs: ENST00000377294.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAGGGCAATTAACAAGTCCAGAAGGCCATTTAAATACACTGGGTaGGAACAAACTATTTTAGGTCCTACAACTTCCAGACCACTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: LRAINKSRRPFKYTG*EQTILGPTTSRPLS Trigger: GGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGTTTGTTCTCACCCAGTGTATTTAAATGGCCTTCTGGACTTGTTAATTGCCCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR GCA 90 bp | GCTCTGGCACTGAAGGCCCCTACAATGTCCCTATCTCTTAAAATTTaGTTTATTTACTCAATTGGACAAAGTTGTTGTGAGTCCATTCAG | + |
|
Preference number: 1 (lower is better) Translates to: ALALKAPTMSLSLKI*FIYSIGQSCCESIQ Trigger: CTGAATGGACTCACAACAACTTTGTCCAATTGAGTAAATAAAGCAAATTTTAAGAGATAGGGACATTGTAGGGGCCTTCAGTGCCAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGTTGGAGGCGCAGGAGTaGAAGGAGGCACAGTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLLEAQE*KEAQWS Trigger: GGACCACTGTGCCTCCTTTCACTCCTGCGCCTCCAA...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCCCCCACCCCAATTCTaGAAACAGTATGTACGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLPPPQF*KQYVRG Trigger: GCCACGTACATACTGTTTTCAGAATTGGGGTGGGGG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGAAGAGGGACACAGATaGCGTCTTAGCACTTGGTCG | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLEEGHR*RLSTWS Trigger: CGACCAAGTGCTAAGACGTCATCTGTGTCCCTCTTC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCCATGGCACCCAGCCTaGACAGATACATTTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLPWHPA*TDTFSP Trigger: AGGAGAAAATGTATCTGTTCAGGCTGGGTGCCATGG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGTCATTAGAGGCAAAATaGATGGTCAGAGCAGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLSLEAK*MVRAAA Trigger: GGCTGCTGCTCTGACCATTCATTTTGCCTCTAATGA...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCCTACCACTCAGATGTaGGTTTCTATCCTCATAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLPTTQM*VSILIG Trigger: GCCTATGAGGATAGAAACTCACATCTGAGTGGTAGG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCTGGTCTCAAACTTCTaGCTTCATGTGATCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLLVSNF*LHVICL Trigger: CAGGCAGATCACATGAAGTCAGAAGTTTGAGACCAG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCACGATGCTGGTGACTaGATAAAACATGGTCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLHDAGD*IKHGQG Trigger: TCCCTGACCATGTTTTATTCAGTCACCAGCATCGTG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGTTAAGGGCTCCAGGGTaGCTTCAGTTCAGTGACAAA | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLLRAPG*LQFSDK Trigger: TTTGTCACTGAACTGAAGCCACCCTGGAGCCCTTAA...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR GCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGATGACAGTCTGGCAATaGTGGAAGATGGTAATAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLMTVWQ*WKMVIG Trigger: GCCTATTACCATCTTCCAGCATTGCCAGACTGTCAT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGATGTCCTAAAGTGCTaGCTGAGGGCAATTAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLDVLKC*LRAINK Trigger: CTTGTTAATTGCCCTCAGCCAGCACTTTAGGACATC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCATGGTAGAGAAATATaGATTCCCCCACCCCAATTC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLHGREI*IPPPQF Trigger: GAATTGGGGTGGGGGAATCCATATTTCTCTACCATG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGTGGAGTTCTATGGATaGAGCAATCTCACAGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLVEFYG*SNLTVS Trigger: AGACACTGTGAGATTGCTCCATCCATAGAACTCCAC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGACAGTGGAGTTCTATaGATGGAGCAATCTCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLDSGVL*MEQSHS Trigger: ACTGTGAGATTGCTCCATCCATAGAACTCCACTGTC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCCATTCATGACAGTCTaGCAATGCTGGAAGATGGTA | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLPFMTV*QCWKMV Trigger: TACCATCTTCCAGCATTGCCAGACTGTCATGAATGG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGATGGTAATAGGCACTTaGGCACTTCGGAAGAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLMVIGT*ALRKKS Trigger: TGATTTCTTCCGAAGTGCTCAAGTGCCTATTACCAT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGAGAACACGATGCTGGTaGCTGAATAAAACATGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLRTRCW*LNKTWS Trigger: TGACCATGTTTTATTCAGTCACCAGCATCGTGTTCT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGAATAACTCACAGCATTaGGCCTTGACATCACATATC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLNNSQH*ALTSHI Trigger: GATATGTGATGTCAAGGCTCAATGCTGTGAGTTATT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGATGAATCTTCGGACCTaGAGAAAGTTTAAGCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: HKAFIITLPYLCASLTNLMNLRT*RKFKLS Trigger: GCTAAGCTTAAACTTTCTCCAGGTCCGAAGATTCAT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR GCA 72 bp | CCCCACATCAGAGCCATCCAACCAGATGTCCTAAAGTaGTGGCTGAGGGCAATTAACAAGTCCAGAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PHIRAIQPDVLK*WLRAINKSRRP Trigger: TGGCCTTCTGGACTTGTTAATTGCCCTCAGCCAGCACTTTAGGACATCTGGTTGGATGGCTCTGATGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR CCA 72 bp | CACATCAGAGCCATCCAACCAGATGTCCTAAAGTGCTaGCTGAGGGCAATTAACAAGTCCAGAAGGCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: HIRAIQPDVLKC*LRAINKSRRPF Trigger: AAATGGCCTTCTGGACTTGTTAATTGCCCTCAGCCAGCACTTTAGGACATCTGGTTGGATGGCTCTGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR TCA 72 bp | ACCTGGAGAAAGTTTAAGCTTAGCTGGCATAAGCCTTaGTGCACAGTCAGCTATAAACTGGGGAAGAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TWRKFKLSWHKP*CTVSYKLGKRD Trigger: GTCCCTCTTCCCCAGTTTATAGCTGACTGTGCATCAAGGCTTATGCCAGCTAAGCTTAAACTTTCTCCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR CCA 72 bp | AGAGCTCTACGGTTTTGTAAGTCTCTGGTCAGCCTGTaGTATTTCAGAGGAGAAATCCAGAAAGGGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: RALRFCKSLVSL*YFRGEIQKGYL Trigger: CAAATACCCTTTCTGGATTTCTCCTCTGAAATACCACAGGCTGACCAGAGACTTACAAAACCGTAGAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR-3UTR CAA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGATCCAGAAAGGGTATTaGAGGATAGACAAGAACACG | + |
|
Preference number: 3 (lower is better) Translates to: HKAFIITLPYLCASLTNLIQKGY*RIDKNT Trigger: CGTGTTCTTGTCTATCCTCAAATACCCTTTCTGGAT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR TCA 72 bp | ATTAACAAGTCCAGAAGGCCATTTAAATACACTGGGTaGGAACAAACTATTTTAGGTCCTACAACTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: INKSRRPFKYTG*EQTILGPTTSR Trigger: TCTGGAAGTTGTAGGACCTAAAATAGTTTGTTCTCACCCAGTGTATTTAAATGGCCTTCTGGACTTGTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGCCCAGGACACCCCCTaGGGCGCAGCTGCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNAQDTP*GAAAQI Trigger: GATCTGTGCAGCTGCGCCTCAGGGGGTGTCCTGGGC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGGCCCCGAGCAGGGCTaGAGGGTGCTCTCACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLGPEQG*RVLSPP Trigger: CGGAGGTGAGAGCACCCTGCAGCCCTGCTCGGGGCC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCCTGGGACCCTGGAGTaGGCCTGGAAGCTACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNPGTLE*AWKLPL Trigger: CAATGGTAGCTTCCAGGCTCACTCCAGGGTCCCAGG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATTTGGAGGCGCAGGAGTaGAAGGAGGCACAGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNLEAQE*KEAQWS Trigger: GGACCACTGTGCCTCCTTTCACTCCTGCGCCTCCAA...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGTCACCAACGGGAACCTaGGGCGCCGGCTCATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLSPTGT*GAGSSS Trigger: GCTGGATGAGCCGGCGCCGCAGGTTCCCGTTGGTGA...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGAGCAGGGCTGCAGGGTaGTCTCACCTCCGCCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLSRAAG*SHLRRQ Trigger: TTGACGGCGGAGGTGAGAGCACCCTGCAGCCCTGCT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATAAACCCAGGCTGGACTaGAGTGGCACCATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNKPRLD*SGTISA Trigger: AGCCGAGATGGTGCCACTGCAGTCCAGCCTGGGTTT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATTGGTCTTCTGCAGACTaGGCGTCCAGGGCTGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNWSSAD*ASRAAF Trigger: AAACGCAGCCCTGGACGCCCAGTCTGCAGAAGACCA...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGTCAGGAGCCCCGTCTaGTCTTCTGCAGACTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLVRSPV*SSADWA Trigger: CGCCCAGTCTGCAGAAGACCAGACGGGGCTCCTGAC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGAGGTTCACCTGAGATaGATCCAGCTGTGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNEVHLR*IQLCPP Trigger: GGGTGGACACAGCTGGATTCATCTCAGGTGAACCTC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCTTTCCGTCCTACCCTaGCTTTCCCAGGACTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLLSVLP*LSQDSP Trigger: CGGGGAGTCCTGGGAAAGTCAGGGTAGGACGGAAAG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATTATAGTCCGTGCCTTTaGAGGGTCGTCCTCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNYSPCL*RVVLCT Trigger: GGTGCAGAGGACGACCCTGCAAAGGCACGGACTATA...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCCATTGCATCTTCTCTaGAGCACCCTCCCTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNPLHLL*STLPGQ Trigger: TTGCCCAGGGAGGGTGCTGCAGAGAAGATGCAATGG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGAAGAGGGACACAGATaGCGTCTTAGCACTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNEEGHR*RLSTWS Trigger: CGACCAAGTGCTAAGACGTCATCTGTGTCCCTCTTC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCTCTCTTATAGTCCGTaGCTTTGCAGGGTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNLSYSP*LCRVVL Trigger: GAGGACGACCCTGCAAAGGCACGGACTATAAGAGAG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCAAACCCTGGGACCCTaGAGTGAGCCTGGAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLQTLGP*SEPGSY Trigger: GTAGCTTCCAGGCTCACTCCAGGGTCCCAGGGTTTG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCCGTGTTGGCCAGGCTaGTCTCAAACTTCTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNPCWPG*SQTSDF Trigger: GAAGTCAGAAGTTTGAGACCAGCCTGGCCAACACGG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGCACCAATGTTGGCATaGATACCATGGGTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNAPMLA*IPWVTV Trigger: CACAGTGACCCATGGTATTCATGCCAACATTGGTGC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCCATGGCACCCAGCCTaGACAGATACATTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNPWHPA*TDTFSP Trigger: AGGAGAAAATGTATCTGTTCAGGCTGGGTGCCATGG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCTATCGTGTAAGGGCTaGGATCCCAGAGATTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNLSCKG*DPRDSC Trigger: GCATGAATCTCTGGGATCCCAGCCCTTACACGATAG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGCAAGCCCAGGAACCTaGAGAACTCTATCGTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNASPGT*RTLSCK Trigger: CTTACACGATAGAGTTCTCCAGGTTCCTGGGCTTGC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCACGATGCTGGTGACTaGATAAAACATGGTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNHDAGD*IKHGQG Trigger: TCCCTGACCATGTTTTATTCAGTCACCAGCATCGTG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGTTTTTGCTCTGGCACTaGAGGCCCCTACAATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLFLLWH*RPLQCP Trigger: GGGACATTGTAGGGGCCTTCAGTGCCAGAGCAAAAA...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGATTTTCAGCAAACCCTaGGACCCTGGAGTGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLIFSKP*DPGVSL Trigger: CAGGCTCACTCCAGGGTCCCAGGGTTTGCTGAAAAT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATTTAAGGGCTCCAGGGTaGCTTCAGTTCAGTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNLRAPG*LQFSDK Trigger: TTTGTCACTGAACTGAAGCCACCCTGGAGCCCTTAA...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATAGCTGGCATAAGCCTTaGTGCACAGTCAGCTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNSWHKP*CTVSYK Trigger: TTTATAGCTGACTGTGCATCAAGGCTTATGCCAGCT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGGGTCTCACTCTAGTTaGGACCTGTATATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNGSHSS*DLYIFR Trigger: TCTGAAGATATACAGGTCGCAACTAGAGTGAGACCC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATATGACAGTCTGGCAATaGTGGAAGATGGTAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNMTVWQ*WKMVIG Trigger: GCCTATTACCATCTTCCAGCATTGCCAGACTGTCAT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGATGTCCTAAAGTGCTaGCTGAGGGCAATTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNDVLKC*LRAINK Trigger: CTTGTTAATTGCCCTCAGCCAGCACTTTAGGACATC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCATGGTAGAGAAATATaGATTCCCCCACCCCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNHGREI*IPPPQF Trigger: GAATTGGGGTGGGGGAATCCATATTTCTCTACCATG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGTGGAGTTCTATGGATaGAGCAATCTCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNVEFYG*SNLTVS Trigger: AGACACTGTGAGATTGCTCCATCCATAGAACTCCAC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATACATTGACCAGACAGTaGAGTTCTATGGATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNTLTRQ*SSMDGA Trigger: TGCTCCATCCATAGAACTCCACTGTCTGGTCAATGT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATACAGTCTGGCAATGCTaGAAGATGGTAATAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNTVWQC*KMVIGT Trigger: AGTGCCTATTACCATCTTCCAGCATTGCCAGACTGT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCCATTCATGACAGTCTaGCAATGCTGGAAGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNPFMTV*QCWKMV Trigger: TACCATCTTCCAGCATTGCCAGACTGTCATGAATGG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATAACAGCTTGCACAGCTaGAAGCATCCTTTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNNSLHS*KHPFPS Trigger: AGAAGGAAAAGGATGCTTCCAGCTGTGCAAGCTGTT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGACTTCTATTCCGTGTaGAACTTCTCTCACACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNDFYSV*NFSHTH Trigger: ATGAGTGTGAGAGAAGTTTCACACGGAATAGAAGTC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCACAGCATTGAGCCTTaGCATCACATATCAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNHSIEP*HHISTL Trigger: AAGTGTTGATATGTGATGTCAAGGCTCAATGCTGTG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATATGGTAATAGGCACTTaGGCACTTCGGAAGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNMVIGT*ALRKKS Trigger: TGATTTCTTCCGAAGTGCTCAAGTGCCTATTACCAT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATAGAACACGATGCTGGTaGCTGAATAAAACATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNRTRCW*LNKTWS Trigger: TGACCATGTTTTATTCAGTCACCAGCATCGTGTTCT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATAGGCGTGTGTCACCATaGCTGGCTAATTTTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNRRVSP*LANFCI Trigger: AATACAAAAATTAGCCAGGCATGGTGACACACGCCT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGGTTTTGTAAGTCTCTaGTCAGCCTGTGGTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNGFVSL*SACGIS Trigger: TGAAATACCACAGGCTGACCAGAGACTTACAAAACC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR CAA 72 bp | CTTTCTAACATGTCACCCTGTCCATATAATAACAGCTaGCACAGCTGGAAGCATCCTTTTCCTTCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSNMSPCPYNNS*HSWKHPFPSLN Trigger: ATTCAGAGAAGGAAAAGGATGCTTCCAGCTGTGCAAGCTGTTATTATATGGACAGGGTGACATGTTAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATTGGCCTCTTATCAAATaGCTTCTTCCAATCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNWPLIK*LLPITF Trigger: GAAAGTGATTGGAAGAAGTCATTTGATAAGAGGCCA...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATATCCTTTTCCTTCTCTaGATTTCTACAAGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNILFLL*ISTSLS Trigger: ACTGAGGCTTGTAGAAATTCAGAGAAGGAAAAGGAT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATATCTTCAGAGGATTCTaGAAGGGTGGTAAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNIFRGF*KGGKFS Trigger: GGAAAATTTACCACCCTTCCAGAATCCTCTGAAGAT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGTCTCTGGTCAGCCTGTaGTATTTCAGAGGAGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLSLVSL*YFRGEI Trigger: GATTTCTCCTCTGAAATACCACAGGCTGACCAGAGA...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGGTATGAAGTTCGAGTaGAACCTTTTCCACATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLGMKFE*NLFHMC Trigger: ACACATGTGGAAAAGGTTTCACTCGAACTTCATACC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATAGAAGATTTCTGCGCTaGTTCAGTTACAGAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TILGPTTSRPLSHGLLSNRRFLR*FSYRNE Trigger: TTCATTTCTGTAACTGAAGCAGCGCAGAAATCTTCT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGAATGAGCACCAATGTTaGCATGAATACCATGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLNEHQC*HEYHGS Trigger: TGACCCATGGTATTCATGCCAACATTGGTGCTCATT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR TCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGAAGACCTCATGGATCTaGCCAATTTGTGAAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLKTSWI*PICERF Trigger: GAATCTTTCACAAATTGGTCAGATCCATGAGGTCTT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCATATAATAACAGCTTaGACAGCTGGAAGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLHIITA*TAGSIL Trigger: AAGGATGCTTCCAGCTGTGCAAGCTGTTATTATATG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| 3UTR CAA 72 bp | ACCACTCATAAGGCATTTATCATTACACTGCCTTATTaGTGTGCAAGTCTTACCAACCTGACTGTACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTHKAFIITLPY*CASLTNLTVLK Trigger: CTTTAGTACAGTCAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATGAGTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR GCA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGGAACAAATCCAAGAGTaGCATTCATCAAAAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKAFIITLPYLCASLTNLEQIQE*HSSKAF Trigger: AAAAGCTTTTGATGAATGGCACTCTTGGATTTGTTC...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS GCA 90 bp | GAAGCGCTGGCGGGAGCGTTCGGGGCCCCGAGCAGGGCTGCAGGGTaGTCTCACCTCCGCCGTCAAGGCGGAGGCTTCCTCCTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EALAGAFGAPSRAAG*SHLRRQGGGFLLLH Trigger: GTGGAGAAGGAGGAAGCCTCCGCCTTGACGGCGGAGGTGAGAGCACCCTGCAGCCCTGCTCGGGGCCCCGAACGCTCCCGCCAGCGCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS CCA 90 bp | CTCGGGTCTCACTCTAGTTGCGACCTGTATATCTTCAGAGGATTCTaGAAGGGTGGTAAATTTTCCAGTAGAACTGCAAGTGGTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSHSSCDLYIFRGF*KGGKFSSRTASGPP Trigger: AGGGGGACCACTTGCAGTTCTACTGGAAAATTTACCACCCTTCCAGAATCCTCTGAAGATATACAGGTCGCAACTAGAGTGAGACCCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CAA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCTGGCACTGGCTACTTaGAGACCCTTGAGTTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TILGPTTSRPLSHGLLSNLALAT*RPLSLC Trigger: ACACAAACTCAAGGGTCTCAAAGTAGCCAGTGCCAG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CAA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCACCAAAGGATGTCTTaGGGAGTGAAAGTGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: TILGPTTSRPLSHGLLSNHQRMS*GVKVIT Trigger: AGTGATCACTTTCACTCCCAAAGACATCCTTTGGTG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CAA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATGATGGTAATAGGCACTaGAGCACTTCGGAAGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: TILGPTTSRPLSHGLLSNDGNRH*STSEEI Trigger: GATTTCTTCCGAAGTGCTCAAGTGCCTATTACCATC...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CAA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATAACAAATACACTAGATaGGCCCAGAATCTAGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: TILGPTTSRPLSHGLLSNNKYTR*AQNLEP Trigger: AGGTTCTAGATTCTGGGCCAATCTAGTGTATTTGTT...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CAA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGCCATATAATAACAGCTaGCACAGCTGGAAGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: HKAFIITLPYLCASLTNLPYNNS*HSWKHP Trigger: AGGATGCTTCCAGCTGTGCAAGCTGTTATTATATGG...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CAA 90 bp | ACTATTTTAGGTCCTACAACTTCCAGACCACTCTCCCATGGCCTCTTATCAAATCTTAGCACTTCTTATTaGTATAAGCAGATCCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TILGPTTSRPLSHGLLSNLSTSY*YKQILR Trigger: TCTGAGGATCTGCTTATACAAATAAGAAGTGCTAAG...ATTTGATAAGAGGCCATGGGAGAGTGGTCTGGAAGTTGTAGGACCTAAAATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS-3UTR CAA 90 bp | CATAAGGCATTTATCATTACACTGCCTTATTTGTGTGCAAGTCTTACCAACCTGATTACACTGCCTTATTaGTGTGCAAGTCTTACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HKAFIITLPYLCASLTNLITLPY*CASLTN Trigger: GTTGGTAAGACTTGCACACAAATAAGGCAGTGTAAT...CAGGTTGGTAAGACTTGCACACAAATAAGGCAGTGTAATGATAAATGCCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS GCA 72 bp | AGCGCTGGCGGGAGCGTTCGGGGCCCCGAGCAGGGCTaGAGGGTGCTCTCACCTCCGCCGTCAAGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGGSVRGPEQG*RVLSPPPSRRR Trigger: CCTCCGCCTTGACGGCGGAGGTGAGAGCACCCTGCAGCCCTGCTCGGGGCCCCGAACGCTCCCGCCAGCGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS GCA 72 bp | GCGGGAGCGTTCGGGGCCCCGAGCAGGGCTGCAGGGTaGTCTCACCTCCGCCGTCAAGGCGGAGGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AGAFGAPSRAAG*SHLRRQGGGFL Trigger: GAGGAAGCCTCCGCCTTGACGGCGGAGGTGAGAGCACCCTGCAGCCCTGCTCGGGGCCCCGAACGCTCCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS CCA 72 bp | TCCTCCTTCTCCACCTTCACGGTCAGGAGCCCCGTCTaGTCTTCTGCAGACTGGGCGTCCAGGGCTGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSFSTFTVRSPV*SSADWASRAAF Trigger: AAACGCAGCCCTGGACGCCCAGTCTGCAGAAGACCAGACGGGGCTCCTGACCGTGAAGGTGGAGAAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||
| CDS CCA 72 bp | CACTCTAGTTGCGACCTGTATATCTTCAGAGGATTCTaGAAGGGTGGTAAATTTTCCAGTAGAACTGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSSCDLYIFRGF*KGGKFSSRTAS Trigger: ACTTGCAGTTCTACTGGAAAATTTACCACCCTTCCAGAATCCTCTGAAGATATACAGGTCGCAACTAGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377294.3 |
||