RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZKSCAN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106261

Ensembl transcript IDs: ENST00000324306.11, ENST00000426572.5, ENST00000432317.1, ENST00000482979.5, ENST00000535170.5, ENST00000620510.1

Found 739 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATaGATCTGCACACAATTCCGGGAAATGCCCACCTTGCTGTTCTCC +
Preference number: 1 (lower is better)
Translates to: FPSFIRQTSCNATTG*ICTQFREMPTLLFS
Trigger: GGAGAACAGCAAGGTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp GACTACTTACACAGCTCACAATCTCCTGTGTGTGAAACAGTCTCCTaGCATCAGCTTCTAGGTAGCCAGTTGCACCCTGCGCACAACGAT +
Preference number: 1 (lower is better)
Translates to: DYLHSSQSPVCETVS*HQLLGSQLHPAHND
Trigger: ATCGTTGTGCGCAGGGTGCAACTGGCTACCTAGAAGCTGATGGCAGGAGACTGTTTCACACACAGGAGATTGTGAGCTGTGTAAGTAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp AGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTaGACACAATTCCGGGAAATGCCCACCTTGCTGTTCTCCTATCCC +
Preference number: 1 (lower is better)
Translates to: SFIRQTSCNATTGCI*TQFREMPTLLFSYP
Trigger: GGGATAGGAGAACAGCAAGGTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp GCAGTCCCACTTGGCCATTCCAGTACACTTCCTACTCTCGCTTCATaGAGAAGACCGTCTACTGACAAGAGAATCCATCCCCTTTGCACA +
Preference number: 1 (lower is better)
Translates to: AVPLGHSSTLPTLAS*RRPSTDKRIHPLCT
Trigger: TGTGCAAAGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTCCATGAAGCGAGAGTAGGAAGTGTACTGGAATGGCCAAGTGGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp ATGCTTCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTaGATGCATCTGCACACAATTCCGGGAAATGCCCACCTTGCTGTT +
Preference number: 1 (lower is better)
Translates to: MLPELHQTDFLQCHD*MHLHTIPGNAHLAV
Trigger: AACAGCAAGGTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp GGGAGCAGGGAACACAGGAACACAGCCAAAGGGAATATTGCAAAATaGTTCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACT +
Preference number: 1 (lower is better)
Translates to: GSREHRNTAKGNIAK*FPSFIRQTSCNATT
Trigger: AGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCATTTTGCAATATTCCCTTTGGCTGTGTTCCTGTGTTCCCTGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp TATTGCAAAATGCTTCCCGAGCTTCATCAGACAGACTTCTTGCAATaGCACGACTGGATGCATCTGCACACAATTCCGGGAAATGCCCAC +
Preference number: 1 (lower is better)
Translates to: YCKMLPELHQTDFLQ*HDWMHLHTIPGNAH
Trigger: GTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCATTTTGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp GGGAATATTGCAAAATGCTTCCCGAGCTTCATCAGACAGACTTCTTaGAATGCCACGACTGGATGCATCTGCACACAATTCCGGGAAATG +
Preference number: 1 (lower is better)
Translates to: GNIAKCFPSFIRQTS*NATTGCICTQFREM
Trigger: CATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCATTTTGCAATATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp CCTCGTATCTCTGAGAAGTTGCTCAGAGTAGGACACAGAGAAATATaGCCCCCACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATT +
Preference number: 1 (lower is better)
Translates to: PRISEKLLRVGHREI*PPPWEVLLSLFKCI
Trigger: AATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTCCTACTCTGAGCAACTTCTCAGAGATACGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp ACATTTCACTATGCGTGTGCTTTTCTCTTGTGTGGAAATCTCACGTaGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTGTGGA +
Preference number: 1 (lower is better)
Translates to: TFHYACAFLLCGNLT*IIRKISLSLQGLCG
Trigger: TCCACACAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACACAAGAGAAAAGCACACGCATAGTGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp ATCTCAGGGATGAGGACAGAACCATCTACATTTGTTGCAGTCCTTTaGAACTGTAGACTGGTGCACATACCCTCTCTTTCGGGAAGAGAT +
Preference number: 1 (lower is better)
Translates to: ISGMRTEPSTFVAVL*NCRLVHIPSLSGRD
Trigger: ATCTCTTCCCGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCCAAAGGACTGCAACAAATGTAGATGGTTCTGTCCTCATCCCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 90 bp GCAAGTAGCATCCTAACCTCCGTATCACTTTCGTGGAGCCAATCTTaGTCTTTCAACTATTATGTTGTGGTTGCCGAGAGTCCAAGAGTG +
Preference number: 1 (lower is better)
Translates to: ASSILTSVSLSWSQS*SFNYYVVVAESPRV
Trigger: CACTCTTGGACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAGATTGGCTCCACGAAAGTGATACGGAGGTTAGGATGCTACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 90 bp ACCTCAGTCTTTAGTGATAAGAAACAGAAAAGTCACTGTGCACTATaGCGATGGCACAGCCAGCCACATCTCAGTACACTGCTGAGTTTC +
Preference number: 1 (lower is better)
Translates to: TSVFSDKKQKSHCAL*RWHSQPHLSTLLSF
Trigger: GAAACTCAGCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTTTCTGTTTCTTATCACTAAAGACTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp TTTATATTTGGAACAAAAACAGCATCAGACCCTAGAGGTTTAGCATaGCTTGTGGCTACGAAGGTCCTCTTTAGAAGCTGGGCCAGGCTA +
Preference number: 1 (lower is better)
Translates to: FIFGTKTASDPRGLA*LVATKVLFRSWARL
Trigger: TAGCCTGGCCCAGCTTCTAAAGAGGACCTTCGTAGCCACAAGGCATGCTAAACCTCTAGGGTCTGATGCTGTTTTTGTTCCAAATATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp TCCTCAGAAAACACATCTTCAAATAGCTGCTTCAAGGACAGCATGTaGCTGAAGATCGAAGCAACCCTAGTGGCAGCTATCCAACAAAGT +
Preference number: 1 (lower is better)
Translates to: SSENTSSNSCFKDSM*LKIEATLVAAIQQS
Trigger: ACTTTGTTGGATAGCTGCCACTAGGGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGTGTTTTCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp GAGAAGTTGCTCAGAGTAGGACACAGAGAAATATGGCCCCCACCCTaGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTA +
Preference number: 1 (lower is better)
Translates to: EKLLRVGHREIWPPP*EVLLSLFKCISVLL
Trigger: TAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTCCTACTCTGAGCAACTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp TGTGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTaGAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTACATAAA +
Preference number: 1 (lower is better)
Translates to: CVEISRGLSVRLAFP*RGCVEGLYAQLLHK
Trigger: TTTATGTAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp AACAGTTGTAGCCTGTTTTCCTCAGAAAACACATCTTCAAATAGCTaGTTCAAGGACAGCATGTGGCTGAAGATCGAAGCAACCCTAGTG +
Preference number: 1 (lower is better)
Translates to: NSCSLFSSENTSSNS*FKDSMWLKIEATLV
Trigger: CACTAGGGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGTGTTTTCTGAGGAAAACAGGCTACAACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp GCTTTAGGGATTTCAAGAAGGGAGAGATGTATTTGGAGTTGTTGTTaGCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATC +
Preference number: 1 (lower is better)
Translates to: ALGISRRERCIWSCC*HFSRTDLRDEDRTI
Trigger: GATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACAACAACTCCAAATACATCTCTCCCTTCTTGAAATCCCTAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 90 bp TTTCTCAAGGGAAAGTCTCAAACTATATATGGGGTTCTCTTGTTATaGGGAGGTCACACTGATAGTCTTGAGGTTTGTTCTCAGTCTATG +
Preference number: 1 (lower is better)
Translates to: FLKGKSQTIYGVLLL*GGHTDSLEVCSQSM
Trigger: CATAGACTGAGAACAAACCTCAAGACTATCAGTGTGACCTCCCCATAACAAGAGAACCCCATATATAGTTTGAGACTTTCCCTTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 90 bp GGTAGGATGAACCTGGTTAGCTGGCTTTGGATAAGCAGATCAGCATaGCTACCTGGAATAAAAGTGACTGACTCTAGGATAAAAATTAAA +
Preference number: 1 (lower is better)
Translates to: GRMNLVSWLWISRSA*LPGIKVTDSRIKIK
Trigger: TTTAATTTTTATCCTAGAGTCAGTCACTTTTATTCCAGGTAGTCATGCTGATCTGCTTATCCAAAGCCAGCTAACCAGGTTCATCCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 90 bp CATGAGATTGGGGTGGTGTCCGCTATTAAATGGAACCACACATCATaGAATTCAATTCTCATGTTAAGACATTCTGTATTGTGGGATGTC +
Preference number: 1 (lower is better)
Translates to: HEIGVVSAIKWNHTS*NSILMLRHSVLWDV
Trigger: GACATCCCACAATACAGAATGTCTTAACATGAGAATTGAATTTCATGATGTGTGGTTCCATTTAATAGCGGACACCACCCCAATCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp TGTATTGTGGGATGTCAAAAGTATTTCCCAAACTTTCGTTTGACCTaGAGAGTTGGAGATGGCTTACCTCCCTATAACTTCAAGTTTGTT +
Preference number: 1 (lower is better)
Translates to: CIVGCQKYFPNFRLT*RVGDGLPPYNFKFV
Trigger: AACAAACTTGAAGTTATAGGGAGGTAAGCCATCTCCAACTCTGCAGGTCAAACGAAAGTTTGGGAAATACTTTTGACATCCCACAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 90 bp GACAGGTTGTTTTTAATCCAGTCTACAAATAAACAAGACAATGCCTaGGTTAGCCCTCTATATAGATTTAGGCTTATGCTGACCTCGTTG +
Preference number: 1 (lower is better)
Translates to: DRLFLIQSTNKQDNA*VSPLYRFRLMLTSL
Trigger: CAACGAGGTCAGCATAAGCCTAAATCTATATAGAGGGCTAACTCAGGCATTGTCTTGTTTATTTGTAGACTGGATTAAAAACAACCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp CTTGATCTTTCAACTATTATGTTGTGGTTGCCGAGAGTCCAAGAGTaGCTTAAAGGTATCCTCATTACTGAAAAGACTGACATTTCACTA +
Preference number: 1 (lower is better)
Translates to: LDLSTIMLWLPRVQE*LKGILITEKTDISL
Trigger: TAGTGAAATGTCAGTCTTTTCAGTAATGAGGATACCTTTAAGGCACTCTTGGACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 90 bp CAATTAGATGTTGCAAGCGTTTTTGACCATGACCCAATTACACTTTaGACTGAGCATCTGATAAACGAATGCACTGCAAGTGGTTTTAAT +
Preference number: 1 (lower is better)
Translates to: QLDVASVFDHDPITL*TEHLINECTASGFN
Trigger: ATTAAAACCACTTGCAGTGCATTCGTTTATCAGATGCTCAGTGCAAAGTGTAATTGGGTCATGGTCAAAAACGCTTGCAACATCTAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGTGAGCCACCGTGCCTaGCCAGTCCTATCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASAVSHRA*PVLSSP
Trigger: GGGGGAGGATAGGACTGGCCAGGCACGGTGGCTCAC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGGAGTGAGCCACCGTaGCTGGCCAGTCCTATCCTC +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASARSEPP*LASPIL
Trigger: GAGGATAGGACTGGCCAGGCACGGTGGCTCACTCCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGCGCCCGGCCAAGATTaGGCTCCCTCTTGCAATGTT +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASAAPGQD*APSCNV
Trigger: AACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACCTCCCATGTTCAAGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASAPPMFK*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACTTGAACATGGGAGG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACCTCCCAGATTTAGGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASAPPRFR*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACCTAAATCTGGGAGG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGGCTGGAGTGCCAGTaGCATGATCTTAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASARLECQ*HDLSSL
Trigger: CAGTGAGCTAAGATCATGCCACTGGCACTCCAGCCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACGCTGCTCCGTTCTGTaGACCGACTTTTTGTCTACA +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASARCSVL*TDFLST
Trigger: TGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGAATCCATCCCCTTTaGACACAGTGGTCACCTGAC +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASARIHPL*TQWSPD
Trigger: GTCAGGTGACCACTGTGTGCAAAGGGGATGGATTCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGCTCACTGCAACCTCTaGCTCCCAGATTTAGGTGAT +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASAAHCNL*LPDLGD
Trigger: ATCACCTAAATCTGGGAGGCAGAGGTTGCAGTGAGC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATTCAAGGACAGCATGTaGCTGAAGATCGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASAFKDSM*LKIEAT
Trigger: GGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 90 bp CATGACTACGGTTTAAAAGAACCTGGTCAGCTGAAGCAGTCCCACTaGGCCATTCCAGTACACTTCCTACTCTCGCTTCATGGAGAAGAC +
Preference number: 2 (lower is better)
Translates to: HDYGLKEPGQLKQSH*AIPVHFLLSLHGED
Trigger: GTCTTCTCCATGAAGCGAGAGTAGGAAGTGTACTGGAATGGCCAAGTGGGACTGCTTCAGCTGACCAGGTTCTTTTAAACCGTAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGGAACTGTAGACTGGTaGACATACCCTCTCTTTCGG +
Preference number: 2 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRGTVDW*TYPLFR
Trigger: CCGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGTCAGTCTGAATGAGTaGCTCTTAGGTGTTCAGTAC +
Preference number: 2 (lower is better)
Translates to: KVTVHYDDGTASHISVHCVSLNE*LLGVQY
Trigger: GTACTGAACACCTAAGAGGCACTCATTCAGACTGAC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGCACCTGGCCTCAGTTaGTTTCTAGAGGGCAAAAGT +
Preference number: 2 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFAPGLS*FLEGKS
Trigger: ACTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCCGGGCCAAGAACTTTTaGATGACTATCTTGAACGCC +
Preference number: 2 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFRAKNF*MTILNA
Trigger: GGCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCG...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAAGAACCTGGTCAGCTaGAGCAGTCCCACTTGGCCA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGKNLVS*SSPTWP
Trigger: TGGCCAAGTGGGACTGCTTCAGCTGACCAGGTTCTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATCACCCAGGCTGGAGTaGAGTGTGCAATCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGSPRLE*SVQSWL
Trigger: GAGCCAAGATTGCACACTGCACTCCAGCCTGGGTGA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATCAACTATTATGTTGTaGTTGCCGAGAGTCCAAGAG +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASASTIML*LPRVQE
Trigger: CTCTTGGACTCTCGGCAACCACAACATAATAGTTGA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAACCATTTGGTCTCATaGACTTTAGCTGCTGATCAG +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASANHLVS*TLAADQ
Trigger: CTGATCAGCAGCTAAAGTCCATGAGACCAAATGGTT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGCTTGGGTCGTTGCCTaGAGTTCCACACCTCACTTT +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSAWVVA*SSTPHF
Trigger: AAAGTGAGGTGTGGAACTCCAGGCAACGACCCAAGC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCCTTGCCTGCCAGGCTaGAGTAGAAACAAATACCCC +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSPCLPG*SRNKYP
Trigger: GGGGTATTTGTTTCTACTCCAGCCTGGCAGGCAAGG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 90 bp CTATATATGGGGTTCTCTTGTTATGGGGAGGTCACACTGATAGTCTaGAGGTTTGTTCTCAGTCTATGTTTCTGTTTCCGCAGGGCGGTC +
Preference number: 2 (lower is better)
Translates to: LYMGFSCYGEVTLIV*RFVLSLCFCFRRAV
Trigger: GACCGCCCTGCGGAAACAGAAACATAGACTGAGAACAAACCTCAAGACTATCAGTGTGACCTCCCCATAACAAGAGAACCCCATATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGGAAGATGTCTCCATaGAACGGAATTAAATGTGAG +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASARKMSP*NGIKCE
Trigger: CTCACATTTAATTCCGTTTCATGGAGACATCTTCCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGAGAAGACCGTCTACTaGCAAGAGAATCCATCCCCT +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSEKTVY*QENPSP
Trigger: AGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGGCTGGAGTGCAGTGTaGAATCTTGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGGWSAV*NLGSLQ
Trigger: TTGCAGTGAGCCAAGATTGCACACTGCACTCCAGCC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATATCACCCAGGCTGGAGTaGAGTGTGCAATCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAISPRLE*SVQSWL
Trigger: GAGCCAAGATTGCACACTGCACTCCAGCCTGGGTGA...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACCTGCAGGGGCTGTGTaGAAGGATTATATGCCCAAC +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGPAGAV*KDYMPN
Trigger: GTTGGGCATATAATCCTTCCACACAGCCCCTGCAGG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACCTTGCCTGCCAGGCTaGAGTAGAAACAAATACCCC +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGPCLPG*SRNKYP
Trigger: GGGGTATTTGTTTCTACTCCAGCCTGGCAGGCAAGG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACAAATTCATCACGATTaGAACATACCGACGGAATTC +
Preference number: 2 (lower is better)
Translates to: SRASSDRLLAMPRLDASAQIHHD*NIPTEF
Trigger: GAATTCCGTCGGTATGTTCCAATCGTGATGAATTTG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGGACACAGAGAAATATaGCCCCCACCCTGGGAAGTA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGGHREI*PPPWEV
Trigger: TACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTCC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATAGAAGTCAGTCTGAATaGGTGCCTCTTAGGTGTTCA +
Preference number: 2 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYRSQSE*VPLRCS
Trigger: TGAACACCTAAGAGGCACTCATTCAGACTGACTTCT...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCTACTTGAGTGGCGATaGCTACTTACACAGCTCACA +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSLLEWR*LLTQLT
Trigger: TGTGAGCTGTGTAAGTAGTCATCGCCACTCAAGTAG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCATTTCACTATGCGTGTaGTTTTCTCTTGTGTGGAAA +
Preference number: 2 (lower is better)
Translates to: KVTVHYDDGTASHISVHCISLCV*FSLVWK
Trigger: TTTCCACACAAGAGAAAAGCACACGCATAGTGAAAT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCCGAGAGTCCAAGAGTaGCTTAAAGGTATCCTCATT +
Preference number: 2 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYPRVQE*LKGILI
Trigger: AATGAGGATACCTTTAAGGCACTCTTGGACTCTCGG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGGAACTGTAGACTGGTaGACATACCCTCTCTTTCGG +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGGTVDW*TYPLFR
Trigger: CCGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAGGCTGGAGTGCAGTGTaGAATCTTGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIGWSAV*NLGSLQ
Trigger: TTGCAGTGAGCCAAGATTGCACACTGCACTCCAGCC...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCACGACTGGATGCATCTaGACACAATTCCGGGAAATG +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSTTGCI*TQFREM
Trigger: CATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCATCAGACAGACTTCTTaGAATGCCACGACTGGATGC +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSIRQTS*NATTGC
Trigger: GCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGAT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTCAAGTGCTAACTTGTaGAGAAATGCATTTAGGAGT +
Preference number: 2 (lower is better)
Translates to: KVTVHYDDGTASHISVHCSSANL*RNAFRS
Trigger: ACTCCTAAATGCATTTCTCCACAAGTTAGCACTTGA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACCTTGCCTGCCAGGCTaGAGTAGAAACAAATACCCC +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIPCLPG*SRNKYP
Trigger: GGGGTATTTGTTTCTACTCCAGCCTGGCAGGCAAGG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACCTCCCATGTTCAAGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPPPMFK*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACTTGAACATGGGAGG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCATTTGGAGTTGTTGTTaGCATTTCAGTAGAACTGAT +
Preference number: 2 (lower is better)
Translates to: KVTVHYDDGTASHISVHCIWSCC*HFSRTD
Trigger: ATCAGTTCTACTGAAATGGCAACAACAACTCCAAAT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAGCACCTGGCCTCAGTTaGTTTCTAGAGGGCAAAAGT +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIAPGLS*FLEGKS
Trigger: ACTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGC...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCAGCTGGGATTACAGGTaGCCACCATCATGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSASWDYR*PPSCPA
Trigger: AGCCGGGCATGATGGTGGGCACCTGTAATCCCAGCT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGTGCTTGGGTCGTTaGCTGGAGTTCCACACCTCA +
Preference number: 2 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLKCLGR*LEFHTS
Trigger: TGAGGTGTGGAACTCCAGGCAACGACCCAAGCACTT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAATCAGACAGACTTCTTaGAATGCCACGACTGGATGC +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGIRQTS*NATTGC
Trigger: GCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGAT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAAACAAAAGGGGGAAATaGCTTGATGGCAAATTCTTC +
Preference number: 2 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRNKRGK*LDGKFF
Trigger: GAAGAATTTGCCATCAAGCCATTTCCCCCTTTTGTT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAAACAAAAGGGGGAAATaGCTTGATGGCAAATTCTTC +
Preference number: 2 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLNKRGK*LDGKFF
Trigger: GAAGAATTTGCCATCAAGCCATTTCCCCCTTTTGTT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGCCTGCAGGGGCTGTGTaGAAGGATTATATGCCCAAC +
Preference number: 2 (lower is better)
Translates to: ILITEKTDISLCVCFSLVPAGAV*KDYMPN
Trigger: GTTGGGCATATAATCCTTCCACACAGCCCCTGCAGG...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGGGGTTCTCTTGTTATaGGGAGGTCACACTGATAGT +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGGVLLL*GGHTDS
Trigger: ACTATCAGTGTGACCTCCCCATAACAAGAGAACCCC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGGGATTTTACCATGTTaGCCAGGCTGGTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGGILPC*PGWSQN
Trigger: GTTTTGAGACCAGCCTGGCCAACATGGTAAAATCCC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACGGTTTAAAAGAACCTaGTCAGCTGAAGCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGRFKRT*SAEAVP
Trigger: TGGGACTGCTTCAGCTGACCAGGTTCTTTTAAACCG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 90 bp CCGTATCACTTTCGTGGAGCCAATCTTGATCTTTCAACTATTATGTaGTGGTTGCCGAGAGTCCAAGAGTGCCTTAAAGGTATCCTCATT +
Preference number: 2 (lower is better)
Translates to: PYHFRGANLDLSTIM*WLPRVQECLKGILI
Trigger: AATGAGGATACCTTTAAGGCACTCTTGGACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAGATTGGCTCCACGAAAGTGATACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAGAAGTCAGTCTGAATaGGTGCCTCTTAGGTGTTCA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGRSQSE*VPLRCS
Trigger: TGAACACCTAAGAGGCACTCATTCAGACTGACTTCT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAATCCTAGTGACTGGTTaGCTTGCAACACGTTTTCCC +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIILVTG*LATRFP
Trigger: GGGAAAACGTGTTGCAAGTCAACCAGTCACTAGGAT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATCTCTGATGTCTATGTaGACTGTCCCACGTATCACA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGSLMSM*TVPRIT
Trigger: TGTGATACGTGGGACAGTTCACATAGACATCAGAGA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATCCGATGCTAAGGGCTaGGATGTGATTAAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGSDAKG*DVIKGF
Trigger: AAAGCCTTTAATCACATCTCAGCCCTTAGCATCGGA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAAAGAACCTGGTCAGCTaGAGCAGTCCCACTTGGCCA +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPKNLVS*SSPTWP
Trigger: TGGCCAAGTGGGACTGCTTCAGCTGACCAGGTTCTT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCTCACCCAGGCTGGAGTaGAGTGTGCAATCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSASPRLE*SVQSWL
Trigger: GAGCCAAGATTGCACACTGCACTCCAGCCTGGGTGA...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGGGAATATTGCAAAATaGTTCCCGAGCTTCATCAGA +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSGNIAK*FPSFIR
Trigger: TCTGATGAAGCTCGGGAAGCATTTTGCAATATTCCC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTGCTTTTCTCTTGTGTaGAAATCTCACGTGGATTAT +
Preference number: 2 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFCFSLV*KSHVDY
Trigger: ATAATCCACGTGAGATTTCCACACAAGAGAAAAGCA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTCAAGTGCTAACTTGTaGAGAAATGCATTTAGGAGT +
Preference number: 2 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFSSANL*RNAFRS
Trigger: ACTCCTAAATGCATTTCTCCACAAGTTAGCACTTGA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 90 bp CACTTTCGTGGAGCCAATCTTGATCTTTCAACTATTATGTTGTGGTaGCCGAGAGTCCAAGAGTGCCTTAAAGGTATCCTCATTACTGAA +
Preference number: 2 (lower is better)
Translates to: HFRGANLDLSTIMLW*PRVQECLKGILITE
Trigger: TTCAGTAATGAGGATACCTTTAAGGCACTCTTGGACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAGATTGGCTCCACGAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTAGAACACTGCTGATGTaGCTAGAAGGATCCTTAAGT +
Preference number: 2 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIRTLLM*LEGSLS
Trigger: ACTTAAGGATCCTTCTAGTCACATCAGCAGTGTTCT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAAGAAGTCAGTCTGAATaGGTGCCTCTTAGGTGTTCA +
Preference number: 2 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKRSQSE*VPLRCS
Trigger: TGAACACCTAAGAGGCACTCATTCAGACTGACTTCT...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAACCGAGAGTCCAAGAGTaGCTTAAAGGTATCCTCATT +
Preference number: 2 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKPRVQE*LKGILI
Trigger: AATGAGGATACCTTTAAGGCACTCTTGGACTCTCGG...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAGTCAGTCTGAATGAGTaGCTCTTAGGTGTTCAGTAC +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIVSLNE*LLGVQY
Trigger: GTACTGAACACCTAAGAGGCACTCATTCAGACTGAC...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGTGTGAAACAGTCTCCTaGCATCAGCTTCTAGGTAGC +
Preference number: 2 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLCETVS*HQLLGS
Trigger: GCTACCTAGAAGCTGATGGCAGGAGACTGTTTCACA...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAAAGTGCTTGGGTCGTTaGCTGGAGTTCCACACCTCA +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPKCLGR*LEFHTS
Trigger: TGAGGTGTGGAACTCCAGGCAACGACCCAAGCACTT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGGGAATATTGCAAAATaGTTCCCGAGCTTCATCAGA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGGNIAK*FPSFIR
Trigger: TCTGATGAAGCTCGGGAAGCATTTTGCAATATTCCC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAACAAAAGGGGGAAATaGCTTGATGGCAAATTCTTC +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSNKRGK*LDGKFF
Trigger: GAAGAATTTGCCATCAAGCCATTTCCCCCTTTTGTT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCTGTGGAAATCTCACGTaGATTATCCGTAAGATTAGC +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSCGNLT*IIRKIS
Trigger: GCTAATCTTACGGATAATCCACGTGAGATTTCCACA...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATTGCTTTTCTCTTGTGTaGAAATCTCACGTGGATTAT +
Preference number: 2 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYCFSLV*KSHVDY
Trigger: ATAATCCACGTGAGATTTCCACACAAGAGAAAAGCA...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAGGGAGAGATGTATTTaGAGTTGTTGTTGCCATTTC +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSRERCI*SCCCHF
Trigger: GAAATGGCAACAACAACTCCAAATACATCTCTCCCT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAACCATTTGGTCTCATaGACTTTAGCTGCTGATCAG +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGNHLVS*TLAADQ
Trigger: CTGATCAGCAGCTAAAGTCCATGAGACCAAATGGTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGCTTGGGTCGTTGCCTaGAGTTCCACACCTCACTTT +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPAWVVA*SSTPHF
Trigger: AAAGTGAGGTGTGGAACTCCAGGCAACGACCCAAGC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAATGAACCTGGTTAGCTaGCTTTGGATAAGCAGATCA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGMNLVS*LWISRS
Trigger: TGATCTGCTTATCCAAAGCCAGCTAACCAGGTTCAT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAACATGAGATTGGGGTaGTGTCCGCTATTAAATGGA +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGNMRLG*CPLLNG
Trigger: TCCATTTAATAGCGGACACCACCCCAATCTCATGTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 90 bp CCAAGATTGAGCTCCCTCTTGCAATGTTTCTCAAATTCATCACGATaGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGT +
Preference number: 2 (lower is better)
Translates to: PRLSSLLQCFSNSSR*EHTDGIHFLSEAMS
Trigger: ACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAACATTGCAAGAGGGAGCTCAATCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAGAACACTGCTGATGTaGCTAGAAGGATCCTTAAGT +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIRTLLM*LEGSLS
Trigger: ACTTAAGGATCCTTCTAGTCACATCAGCAGTGTTCT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCTCGTGGAGCCAATCTTaGTCTTTCAACTATTATGTT +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSSWSQS*SFNYYV
Trigger: AACATAATAGTTGAAAGATCAAGATTGGCTCCACGA...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCCACGTTCCTTTTTCTaGAAAGCAACAAAAATCACA +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSPRSFF*KATKIT
Trigger: TGTGATTTTTGTTGCTTTTCAGAAAAAGGAACGTGG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGACCCTTGTCCTACTTaGGTGGCGATGACTACTTAC +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSADPCPT*VAMTTY
Trigger: GTAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAATTACACTTTGCACTaGGCATCTGATAAACGAATG +
Preference number: 2 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSNYTLH*ASDKRM
Trigger: CATTCGTTTATCAGATGCTCAGTGCAAAGTGTAATT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGAGAAGACCGTCTACTaGCAAGAGAATCCATCCCCT +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPEKTVY*QENPSP
Trigger: AGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGACAGAAAAGTCACTGTaGACTATGACGATGGCACAG +
Preference number: 2 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLTEKSL*TMTMAQ
Trigger: CTGTGCCATCGTCATAGTGCACAGTGACTTTTCTGT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGAGGGCAAAAGTCCTTaGTCAAAAGCACAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLEGKSP*SKAQEF
Trigger: AAACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAACATCTTCAAATAGCTaGTTCAAGGACAGCATGTGG +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAITSSNS*FKDSMW
Trigger: CCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGGTTTTAGCCTTGCCTaGCAGGCTGGAGTAGAAACA +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPGFSLA*QAGVET
Trigger: TGTTTCTACTCCAGCCTGGCAGGCAAGGCTAAAACC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATGTGGAAATCTCACGTaGATTATCCGTAAGATTAGC +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGCGNLT*IIRKIS
Trigger: GCTAATCTTACGGATAATCCACGTGAGATTTCCACA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 90 bp TCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTaGTGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: SLLKRLTFHYACAFL*CGNLTWIIRKISLS
Trigger: GGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 90 bp TATAAGTTTCTCAAGGGAAAGTCTCAAACTATATATGGGGTTCTCTaGTTATGGGGAGGTCACACTGATAGTCTTGAGGTTTGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: YKFLKGKSQTIYGVL*LWGGHTDSLEVCSQ
Trigger: CTGAGAACAAACCTCAAGACTATCAGTGTGACCTCCCCATAACAAGAGAACCCCATATATAGTTTGAGACTTTCCCTTGAGAAACTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGAGAACACTGCTGATGTaGCTAGAAGGATCCTTAAGT +
Preference number: 2 (lower is better)
Translates to: ILITEKTDISLCVCFSLVRTLLM*LEGSLS
Trigger: ACTTAAGGATCCTTCTAGTCACATCAGCAGTGTTCT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTTTGGTAGGCTACCAGTaGTCATATATACAACTTATC +
Preference number: 2 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYILVGYQ*SYIQLI
Trigger: GATAAGTTGTATATATGATCACTGGTAGCCTACCAA...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACTCAAAAGTGATGGCTaGGTTATATCAGCATATAGT +
Preference number: 2 (lower is better)
Translates to: HSILKYSASLLNECLLKGLKSDG*VISAYS
Trigger: ACTATATGCTGATATAACTCAGCCATCACTTTTGAG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACGGGCCAAGAACTTTTaGATGACTATCTTGAACGCC +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPRAKNF*MTILNA
Trigger: GGCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCTGTGAAACAGTCTCCTaGCATCAGCTTCTAGGTAGC +
Preference number: 2 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFCETVS*HQLLGS
Trigger: GCTACCTAGAAGCTGATGGCAGGAGACTGTTTCACA...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAACGACTGGATGCATCTaGACACAATTCCGGGAAATG +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPTTGCI*TQFREM
Trigger: CATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAACCATTTGGTCTCATaGACTTTAGCTGCTGATCAG +
Preference number: 2 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLNHLVS*TLAADQ
Trigger: CTGATCAGCAGCTAAAGTCCATGAGACCAAATGGTT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGGGATTTTACCATGTTaGCCAGGCTGGTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPGILPC*PGWSQN
Trigger: GTTTTGAGACCAGCCTGGCCAACATGGTAAAATCCC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGGGATTTTACCATGTTaGCCAGGCTGGTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSAGILPC*PGWSQN
Trigger: GTTTTGAGACCAGCCTGGCCAACATGGTAAAATCCC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCTTCAAGGACAGCATGTaGCTGAAGATCGAAGCAACC +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSAFKDSM*LKIEAT
Trigger: GGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAA...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAACAAAACTCAAAAGTaGTGGCTGAGTTATATCAGC +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAINKTQK*WLSYIS
Trigger: GCTGATATAACTCAGCCATCACTTTTGAGTTTTGTT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCATCTCTGATGTCTATGTaGACTGTCCCACGTATCACA +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPSLMSM*TVPRIT
Trigger: TGTGATACGTGGGACAGTTCACATAGACATCAGAGA...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCTCTCTGATGTCTATGTaGACTGTCCCACGTATCACA +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSASLMSM*TVPRIT
Trigger: TGTGATACGTGGGACAGTTCACATAGACATCAGAGA...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAACAGAAAAGTCACTGTaGACTATGACGATGGCACAG +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPTEKSL*TMTMAQ
Trigger: CTGTGCCATCGTCATAGTGCACAGTGACTTTTCTGT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGAGGGCAAAAGTCCTTaGTCAAAAGCACAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSAEGKSP*SKAQEF
Trigger: AAACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCCACCCTGGGAAGTACTaGTGTCACTGTTTAAGTGTA +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSAHPGKY*CHCLSV
Trigger: TACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAAATATCCTAGTGACTaGTTGACTTGCAACACGTTT +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIKYPSD*LTCNTF
Trigger: AAACGTGTTGCAAGTCAACCAGTCACTAGGATATTT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAATCTCAGTACACTGCTaGGTTTCTCAGAGCAACAAA +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPISVHC*VSQSNK
Trigger: TTTGTTGCTCTGAGAAACTCAGCAGTGTACTGAGAT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCACAATAACAAGGGACTaGAGGTACAAAACACACACG +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSATITRD*RYKTHT
Trigger: CGTGTGTGTTTTGTACCTTCAGTCCCTTGTTATTGT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAATTTGGAGTTGTTGTTaGCATTTCAGTAGAACTGAT +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIIWSCC*HFSRTD
Trigger: ATCAGTTCTACTGAAATGGCAACAACAACTCCAAAT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACATCTGATAAACGAATaGACTGCAAGTGGTTTTAAT +
Preference number: 2 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIHLINE*TASGFN
Trigger: ATTAAAACCACTTGCAGTGCATTCGTTTATCAGATG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGTGCTTTTCTCTTGTGTaGAAATCTCACGTGGATTAT +
Preference number: 2 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLCFSLV*KSHVDY
Trigger: ATAATCCACGTGAGATTTCCACACAAGAGAAAAGCA...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCATCAACTATTATGTTGTaGTTGCCGAGAGTCCAAGAG +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPSTIML*LPRVQE
Trigger: CTCTTGGACTCTCGGCAACCACAACATAATAGTTGA...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAAGGAAGATGTCTCCATaGAACGGAATTAAATGTGAG +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPRKMSP*NGIKCE
Trigger: CTCACATTTAATTCCGTTTCATGGAGACATCTTCCT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCATAAGCAGATCAGCATaGCTACCTGGAATAAAAGTG +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSAISRSA*LPGIKV
Trigger: CACTTTTATTCCAGGTAGTCATGCTGATCTGCTTAT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCGGGTTTTTCTTCCGTTaGATGGGTAGAAATATCCTA +
Preference number: 2 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFGFFFR*MGRNIL
Trigger: TAGGATATTTCTACCCATGCAACGGAAGAAAAACCC...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGACCCAATTACACTTTaGACTGAGCATCTGATAAAC +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSADPITL*TEHLIN
Trigger: GTTTATCAGATGCTCAGTGCAAAGTGTAATTGGGTC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCGACCCAATTACACTTTaGACTGAGCATCTGATAAAC +
Preference number: 2 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFDPITL*TEHLIN
Trigger: GTTTATCAGATGCTCAGTGCAAAGTGTAATTGGGTC...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCAGGGAGAGATGTATTTaGAGTTGTTGTTGCCATTTC +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSARERCI*SCCCHF
Trigger: GAAATGGCAACAACAACTCCAAATACATCTCTCCCT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCTCGTGGAGCCAATCTTaGTCTTTCAACTATTATGTT +
Preference number: 2 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFSWSQS*SFNYYV
Trigger: AACATAATAGTTGAAAGATCAAGATTGGCTCCACGA...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCATTGGTAGGCTACCAGTaGTCATATATACAACTTATC +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPLVGYQ*SYIQLI
Trigger: GATAAGTTGTATATATGATCACTGGTAGCCTACCAA...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCTTGGTAGGCTACCAGTaGTCATATATACAACTTATC +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSALVGYQ*SYIQLI
Trigger: GATAAGTTGTATATATGATCACTGGTAGCCTACCAA...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACCACGTTCCTTTTTCTaGAAAGCAACAAAAATCACA +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPPRSFF*KATKIT
Trigger: TGTGATTTTTGTTGCTTTTCAGAAAAAGGAACGTGG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAAATTACACTTTGCACTaGGCATCTGATAAACGAATG +
Preference number: 2 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPNYTLH*ASDKRM
Trigger: CATTCGTTTATCAGATGCTCAGTGCAAAGTGTAATT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCATTTGGAGTTGTTGTTaGCATTTCAGTAGAACTGAT +
Preference number: 2 (lower is better)
Translates to: KYHLSITHRSHSILKYSAIWSCC*HFSRTD
Trigger: ATCAGTTCTACTGAAATGGCAACAACAACTCCAAAT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp CACAGCTCACAATCTCCTGTGTGTGAAACAGTCTCCTaGCATCAGCTTCTAGGTAGCCAGTTGCACCCTGCG +
Preference number: 3 (lower is better)
Translates to: HSSQSPVCETVS*HQLLGSQLHPA
Trigger: CGCAGGGTGCAACTGGCTACCTAGAAGCTGATGGCAGGAGACTGTTTCACACACAGGAGATTGTGAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp AGACAGACTTCTTGCAATGCCACGACTGGATGCATCTaGACACAATTCCGGGAAATGCCCACCTTGCTGTTC +
Preference number: 3 (lower is better)
Translates to: RQTSCNATTGCI*TQFREMPTLLF
Trigger: GAACAGCAAGGTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp ATGCTTCCCGAGCTTCATCAGACAGACTTCTTGCAATaGCACGACTGGATGCATCTGCACACAATTCCGGGA +
Preference number: 3 (lower is better)
Translates to: MLPELHQTDFLQ*HDWMHLHTIPG
Trigger: TCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp GAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTaGATGCATCTGCACACAATTCCGGGAAATGCCCAC +
Preference number: 3 (lower is better)
Translates to: ELHQTDFLQCHD*MHLHTIPGNAH
Trigger: GTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCTTCTAGGTAGCCAGTaGCACCCTGCGCACAACGAT +
Preference number: 3 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYLLGSQ*HPAHND
Trigger: ATCGTTGTGCGCAGGGTGCAACTGGCTACCTAGAAG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCCTTGGGTAGGACCCTaGTCCTACTTGAGTGGCGAT +
Preference number: 3 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYPWVGP*SYLSGD
Trigger: ATCGCCACTCAAGTAGGACAAGGGTCCTACCCAAGG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGCGGGCCAAGAACTTTaGAATGACTATCTTGAACGC +
Preference number: 3 (lower is better)
Translates to: SRASSDRLLAMPRLDASAAGQEL*NDYLER
Trigger: GCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCGC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp ACTTCCTACTCTCGCTTCATGGAGAAGACCGTCTACTaGCAAGAGAATCCATCCCCTTTGCACACAGTGGTC +
Preference number: 3 (lower is better)
Translates to: TSYSRFMEKTVY*QENPSPLHTVV
Trigger: GACCACTGTGTGCAAAGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTCCATGAAGCGAGAGTAGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp TTCATCAGACAGACTTCTTGCAATGCCACGACTGGATaGATCTGCACACAATTCCGGGAAATGCCCACCTTG +
Preference number: 3 (lower is better)
Translates to: FIRQTSCNATTG*ICTQFREMPTL
Trigger: CAAGGTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp CTTGGCCATTCCAGTACACTTCCTACTCTCGCTTCATaGAGAAGACCGTCTACTGACAAGAGAATCCATCCC +
Preference number: 3 (lower is better)
Translates to: LGHSSTLPTLAS*RRPSTDKRIHP
Trigger: GGGATGGATTCTCTTGTCAGTAGACGGTCTTCTCCATGAAGCGAGAGTAGGAAGTGTACTGGAATGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp GCTGGAAGACTTAATGATGGAGATTTAGGGCAACTGTaGCTGCTTGGACCCTTCCCTGGACCAAAGGAACTT +
Preference number: 3 (lower is better)
Translates to: AGRLNDGDLGQL*LLGPFPGPKEL
Trigger: AAGTTCCTTTGGTCCAGGGAAGGGTCCAAGCAGCCACAGTTGCCCTAAATCTCCATCATTAAGTCTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp GGAACAAAAACAGCATCAGACCCTAGAGGTTTAGCATaGCTTGTGGCTACGAAGGTCCTCTTTAGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: GTKTASDPRGLA*LVATKVLFRSW
Trigger: CCAGCTTCTAAAGAGGACCTTCGTAGCCACAAGGCATGCTAAACCTCTAGGGTCTGATGCTGTTTTTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp GCAAAATGCTTCCCGAGCTTCATCAGACAGACTTCTTaGAATGCCACGACTGGATGCATCTGCACACAATTC +
Preference number: 3 (lower is better)
Translates to: AKCFPSFIRQTS*NATTGCICTQF
Trigger: GAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCATTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGTCCCAATGTCGTTTTaGTTTTCACTGTCCCTCTTT +
Preference number: 3 (lower is better)
Translates to: KVTVHYDDGTASHISVHCVPMSF*FSLSLF
Trigger: AAAGAGGGACAGTGAAAACAAAAACGACATTGGGAC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATGGACCCTTGTCCTACTaGAGTGGCGATGACTACTTA +
Preference number: 3 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYGPLSY*SGDDYL
Trigger: TAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTCC...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAATGTTGCAAGCGTTTTaGACCATGACCCAATTACAC +
Preference number: 3 (lower is better)
Translates to: SRASSDRLLAMPRLDASAMLQAF*TMTQLH
Trigger: GTGTAATTGGGTCATGGTCAAAAACGCTTGCAACAT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACACTGTCCCTCTTTTTaGAGAAATAAGCAGGATGTT +
Preference number: 3 (lower is better)
Translates to: SRASSDRLLAMPRLDASAHCPSF*RNKQDV
Trigger: AACATCCTGCTTATTTCTCAAAAAAGAGGGACAGTG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGGACCCTTGTCCTACTaGAGTGGCGATGACTACTTA +
Preference number: 3 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSGPLSY*SGDDYL
Trigger: TAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTCC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp ATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTaGAGGGGCTGTGTGGAAGGATTATATGCCCAACTA +
Preference number: 3 (lower is better)
Translates to: ISRGLSVRLAFP*RGCVEGLYAQL
Trigger: TAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp TATGCGTGTGCTTTTCTCTTGTGTGGAAATCTCACGTaGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGG +
Preference number: 3 (lower is better)
Translates to: YACAFLLCGNLT*IIRKISLSLQG
Trigger: CCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACACAAGAGAAAAGCACACGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCCTTTCAACTATTATGTaGTGGTTGCCGAGAGTCCAA +
Preference number: 3 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFLSTIM*WLPRVQ
Trigger: TTGGACTCTCGGCAACCACAACATAATAGTTGAAAG...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTTCGTGGAGCCAATCTaGATCTTTCAACTATTATGT +
Preference number: 3 (lower is better)
Translates to: KVTVHYDDGTASHISVHCFVEPI*IFQLLC
Trigger: ACATAATAGTTGAAAGATCAAGATTGGCTCCACGAA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCAGAATTCTAAGAGCTTaGCCACAGAAAGATGTCAAA +
Preference number: 3 (lower is better)
Translates to: KVTVHYDDGTASHISVHCRILRA*PQKDVK
Trigger: TTTGACATCTTTCTGTGGCAAAGCTCTTAGAATTCT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGCCTTGGGTAGGACCCTaGTCCTACTTGAGTGGCGAT +
Preference number: 3 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLPWVGP*SYLSGD
Trigger: ATCGCCACTCAAGTAGGACAAGGGTCCTACCCAAGG...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAAGGGCGGTCCTAGCCTaGGGTAGGACCCTTGTCCTA +
Preference number: 3 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPRAVLA*GRTLVL
Trigger: TAGGACAAGGGTCCTACCCAAGGCTAGGACCGCCCT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp GACACAGAGAAATATGGCCCCCACCCTGGGAAGTACTaGTGTCACTGTTTAAGTGTATTTCAGTTCTGTTAC +
Preference number: 3 (lower is better)
Translates to: DTEKYGPHPGKY*CHCLSVFQFCY
Trigger: GTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp ATGAGGACAGAACCATCTACATTTGTTGCAGTCCTTTaGAACTGTAGACTGGTGCACATACCCTCTCTTTCG +
Preference number: 3 (lower is better)
Translates to: MRTEPSTFVAVL*NCRLVHIPSLS
Trigger: CGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCCAAAGGACTGCAACAAATGTAGATGGTTCTGTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCTTTCAACTATTATGTaGTGGTTGCCGAGAGTCCAA +
Preference number: 3 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYLSTIM*WLPRVQ
Trigger: TTGGACTCTCGGCAACCACAACATAATAGTTGAAAG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGAAATAAGCAGGATGTaGGCCAAAGTAGGGCTTGTT +
Preference number: 3 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSEISRM*AKVGLV
Trigger: AACAAGCCCTACTTTGGCCAACATCCTGCTTATTTC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCTATCCTAGTGACTGGTaGACTTGCAACACGTTTTCC +
Preference number: 3 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSYPSDW*TCNTFS
Trigger: GGAAAACGTGTTGCAAGTCAACCAGTCACTAGGATA...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACAGGCTTTCACCACGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPQAFTT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACGTGGTGAAAGCCTG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp TTTAGTGATAAGAAACAGAAAAGTCACTGTGCACTATaGCGATGGCACAGCCAGCCACATCTCAGTACACTG +
Preference number: 3 (lower is better)
Translates to: FSDKKQKSHCAL*RWHSQPHLSTL
Trigger: CAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTTTCTGTTTCTTATCACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp TGGCAGCTATCCAACAAAGTCAGGAAGATGTCTCCATaGAACGGAATTAAATGTGAGGGCACAGGTCACATT +
Preference number: 3 (lower is better)
Translates to: WQLSNKVRKMSP*NGIKCEGTGHI
Trigger: AATGTGACCTGTGCCCTCACATTTAATTCCGTTTCATGGAGACATCTTCCTGACTTTGTTGGATAGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp AGCCTGTTTTCCTCAGAAAACACATCTTCAAATAGCTaGTTCAAGGACAGCATGTGGCTGAAGATCGAAGCA +
Preference number: 3 (lower is better)
Translates to: SLFSSENTSSNS*FKDSMWLKIEA
Trigger: TGCTTCGATCTTCAGCCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGTGTTTTCTGAGGAAAACAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGAAATAAGCAGGATGTaGGCCAAAGTAGGGCTTGTT +
Preference number: 3 (lower is better)
Translates to: HSILKYSASLLNECLLKGEISRM*AKVGLV
Trigger: AACAAGCCCTACTTTGGCCAACATCCTGCTTATTTC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCACTGTCCCTCTTTTTaGAGAAATAAGCAGGATGTT +
Preference number: 3 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYHCPSF*RNKQDV
Trigger: AACATCCTGCTTATTTCTCAAAAAAGAGGGACAGTG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGCCTTTCGTTTATATTaGGAACAAAAACAGCATCAG +
Preference number: 3 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFAFRLY*EQKQHQ
Trigger: CTGATGCTGTTTTTGTTCCAAATATAAACGAAAGGC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAGAGGGCAAAAGTCCTaGCTCAAAAGCACAGGAGTT +
Preference number: 3 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIRGQKS*LKSTGV
Trigger: AACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTCT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCGCACCTGGCCTCAGTaGCTTTCTAGAGGGCAAAAG +
Preference number: 3 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFRTWPQ*LSRGQK
Trigger: CTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGCG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACACAGCAACGAGTCTTaGCAAAACCTCTCTCCTAAT +
Preference number: 3 (lower is better)
Translates to: HSILKYSASLLNECLLKGHSNES*QNLSPN
Trigger: ATTAGGAGAGAGGTTTTGCAAAGACTCGTTGCTGTG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp ATCCTAACCTCCGTATCACTTTCGTGGAGCCAATCTTaGTCTTTCAACTATTATGTTGTGGTTGCCGAGAGT +
Preference number: 3 (lower is better)
Translates to: ILTSVSLSWSQS*SFNYYVVVAES
Trigger: ACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAGATTGGCTCCACGAAAGTGATACGGAGGTTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp GACGATGGCACAGCCAGCCACATCTCAGTACACTGCTaGGTTTCTCAGAGCAACAAAATACATTTAGTAATT +
Preference number: 3 (lower is better)
Translates to: DDGTASHISVHC*VSQSNKIHLVI
Trigger: AATTACTAAATGTATTTTGTTGCTCTGAGAAACTCAGCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp AACCTGGTTAGCTGGCTTTGGATAAGCAGATCAGCATaGCTACCTGGAATAAAAGTGACTGACTCTAGGATA +
Preference number: 3 (lower is better)
Translates to: NLVSWLWISRSA*LPGIKVTDSRI
Trigger: TATCCTAGAGTCAGTCACTTTTATTCCAGGTAGTCATGCTGATCTGCTTATCCAAAGCCAGCTAACCAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp GTTGCAAGCGTTTTTGACCATGACCCAATTACACTTTaGACTGAGCATCTGATAAACGAATGCACTGCAAGT +
Preference number: 3 (lower is better)
Translates to: VASVFDHDPITL*TEHLINECTAS
Trigger: ACTTGCAGTGCATTCGTTTATCAGATGCTCAGTGCAAAGTGTAATTGGGTCATGGTCAAAAACGCTTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp AAAGGCTGCACGTTTAAAGGAGTTGTTCCATTTCAGTaGCCCATTAGCCTGTCTTTCCTCAGAAATTTACCA +
Preference number: 3 (lower is better)
Translates to: KGCTFKGVVPFQ*PISLSFLRNLP
Trigger: TGGTAAATTTCTGAGGAAAGACAGGCTAATGGGGCACTGAAATGGAACAACTCCTTTAAACGTGCAGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp GGATGTCAAAAGTATTTCCCAAACTTTCGTTTGACCTaGAGAGTTGGAGATGGCTTACCTCCCTATAACTTC +
Preference number: 3 (lower is better)
Translates to: GCQKYFPNFRLT*RVGDGLPPYNF
Trigger: GAAGTTATAGGGAGGTAAGCCATCTCCAACTCTGCAGGTCAAACGAAAGTTTGGGAAATACTTTTGACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGACTATTATGTTGTGGTaGCCGAGAGTCCAAGAGTGC +
Preference number: 3 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLTIMLW*PRVQEC
Trigger: GCACTCTTGGACTCTCGGCAACCACAACATAATAGT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGTCCCAATGTCGTTTTaGTTTTCACTGTCCCTCTTT +
Preference number: 3 (lower is better)
Translates to: HSILKYSASLLNECLLKGVPMSF*FSLSLF
Trigger: AAAGAGGGACAGTGAAAACAAAAACGACATTGGGAC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAAGGGAGAGATGTATTaGGAGTTGTTGTTGCCATTT +
Preference number: 3 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSKGEMY*ELLLPF
Trigger: AAATGGCAACAACAACTCCAAATACATCTCTCCCTT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR GCA 72 bp TCAACTATTATGTTGTGGTTGCCGAGAGTCCAAGAGTaGCTTAAAGGTATCCTCATTACTGAAAAGACTGAC +
Preference number: 3 (lower is better)
Translates to: STIMLWLPRVQE*LKGILITEKTD
Trigger: GTCAGTCTTTTCAGTAATGAGGATACCTTTAAGGCACTCTTGGACTCTCGGCAACCACAACATAATAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp GGAAAGTCTCAAACTATATATGGGGTTCTCTTGTTATaGGGAGGTCACACTGATAGTCTTGAGGTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: GKSQTIYGVLLL*GGHTDSLEVCS
Trigger: AGAACAAACCTCAAGACTATCAGTGTGACCTCCCCATAACAAGAGAACCCCATATATAGTTTGAGACTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp GCTCCCTCTTGCAATGTTTCTCAAATTCATCACGATTaGAACATACCGACGGAATTCATTTTCTGTCTGAAG +
Preference number: 3 (lower is better)
Translates to: APSCNVSQIHHD*NIPTEFIFCLK
Trigger: CTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAACATTGCAAGAGGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAGTCACACTGATAGTCTaGAGGTTTGTTCTCAGTCTA +
Preference number: 3 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIVTLIV*RFVLSL
Trigger: TAGACTGAGAACAAACCTCAAGACTATCAGTGTGAC...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCACTATTATGTTGTGGTaGCCGAGAGTCCAAGAGTGC +
Preference number: 3 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFTIMLW*PRVQEC
Trigger: GCACTCTTGGACTCTCGGCAACCACAACATAATAGT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAACCATCTACATTTGTaGCAGTCCTTTGGAACTGTA +
Preference number: 3 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAINHLHL*QSFGTV
Trigger: TACAGTTCCAAAGGACTGCAACAAATGTAGATGGTT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGTCACACTGATAGTCTaGAGGTTTGTTCTCAGTCTA +
Preference number: 3 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLVTLIV*RFVLSL
Trigger: TAGACTGAGAACAAACCTCAAGACTATCAGTGTGAC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATATTAGCTCCCACTTCGTaGGTTCCATATAAAACCATT +
Preference number: 3 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAILAPTS*VPYKTI
Trigger: AATGGTTTTATATGGAACCAACGAAGTGGGAGCTAA...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGCACGTTTAAAGGAGTaGTTCCATTTCAGTGCCCCA +
Preference number: 3 (lower is better)
Translates to: KYHLSITHRSHSILKYSAARLKE*FHFSAP
Trigger: TGGGGCACTGAAATGGAACAACTCCTTTAAACGTGC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp TCTAAGCATAAGGATTTAAGAGTTAGTGGGAAAGCATaGCTACGGTTTAAAAGAACCTGGTCAGCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: SKHKDLRVSGKA*LRFKRTWSAEA
Trigger: TGCTTCAGCTGACCAGGTTCTTTTAAACCGTAGTCATGCTTTCCCACTAACTCTTAAATCCTTATGCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATTCGTGGAGCCAATCTaGATCTTTCAACTATTATGT +
Preference number: 3 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKFVEPI*IFQLLC
Trigger: ACATAATAGTTGAAAGATCAAGATTGGCTCCACGAA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGGGAGAGATGTATTaGGAGTTGTTGTTGCCATTT +
Preference number: 3 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLKGEMY*ELLLPF
Trigger: AAATGGCAACAACAACTCCAAATACATCTCTCCCTT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGTTAGCTCCCACTTCGTaGGTTCCATATAAAACCATT +
Preference number: 3 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLLAPTS*VPYKTI
Trigger: AATGGTTTTATATGGAACCAACGAAGTGGGAGCTAA...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACACAGCAACGAGTCTTaGCAAAACCTCTCTCCTAAT +
Preference number: 3 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPHSNES*QNLSPN
Trigger: ATTAGGAGAGAGGTTTTGCAAAGACTCGTTGCTGTG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp GGGGTGGTGTCCGCTATTAAATGGAACCACACATCATaGAATTCAATTCTCATGTTAAGACATTCTGTATTG +
Preference number: 3 (lower is better)
Translates to: GVVSAIKWNHTS*NSILMLRHSVL
Trigger: CAATACAGAATGTCTTAACATGAGAATTGAATTTCATGATGTGTGGTTCCATTTAATAGCGGACACCACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CCA 72 bp TTCTGCCTCCATTTTAGTTACTTAGATATACTCTTCTaGAGTAATGGGTTTTTCTTCCGTTGCATGGGTAGA +
Preference number: 3 (lower is better)
Translates to: FCLHFSYLDILF*SNGFFFRCMGR
Trigger: TCTACCCATGCAACGGAAGAAAAACCCATTACTCCAGAAGAGTATATCTAAGTAACTAAAATGGAGGCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCTTTCAACTATTATGTaGTGGTTGCCGAGAGTCCAA +
Preference number: 3 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFLSTIM*WLPRVQ
Trigger: TTGGACTCTCGGCAACCACAACATAATAGTTGAAAG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGCCTTTCGTTTATATTaGGAACAAAAACAGCATCAG +
Preference number: 3 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLAFRLY*EQKQHQ
Trigger: CTGATGCTGTTTTTGTTCCAAATATAAACGAAAGGC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCAAGGGAGAGATGTATTaGGAGTTGTTGTTGCCATTT +
Preference number: 3 (lower is better)
Translates to: KYHLSITHRSHSILKYSAKGEMY*ELLLPF
Trigger: AAATGGCAACAACAACTCCAAATACATCTCTCCCTT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR-3UTR CAA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGCCTTTCGTTTATATTaGGAACAAAAACAGCATCAG +
Preference number: 3 (lower is better)
Translates to: KYHLSITHRSHSILKYSAAFRLY*EQKQHQ
Trigger: CTGATGCTGTTTTTGTTCCAAATATAAACGAAAGGC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp AACATACCGACGGAATTCATTTTCTGTCTGAAGCAATaGGTGCTATACATGAAAGTTTTCCTCACATATAAT +
Preference number: 3 (lower is better)
Translates to: NIPTEFIFCLKQ*VLYMKVFLTYN
Trigger: ATTATATGTGAGGAAAACTTTCATGTATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR TCA 72 bp TTTTTAATCCAGTCTACAAATAAACAAGACAATGCCTaGGTTAGCCCTCTATATAGATTTAGGCTTATGCTG +
Preference number: 3 (lower is better)
Translates to: FLIQSTNKQDNA*VSPLYRFRLML
Trigger: CAGCATAAGCCTAAATCTATATAGAGGGCTAACTCAGGCATTGTCTTGTTTATTTGTAGACTGGATTAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAGCGAGAAAGGGGAGCTaGCTCTGGGGCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLARKGS*LWGSGR
Trigger: CCGGCCTGAGCCCCAGAGTCAGCTCCCCTTTCTCGC...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000535170.5
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGTTCCTTCAGCCGACTaGGAGCCTCTCGGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAVPSAD*EPLGAQ
Trigger: TTGGGCCCCGAGAGGCTCTCAGTCGGCTGAAGGAAC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCTTCTCTGGTTGAGGTaGGGGGAAGGCGCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCLLWLR*GEGARV
Trigger: TACCCGAGCGCCTTCCCCTCACCTCAACCAGAGAAG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGCGAGAAAGGGGAGCTaGCTCTGGGGCTCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSARKGS*LWGSGR
Trigger: CCGGCCTGAGCCCCAGAGTCAGCTCCCCTTTCTCGC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000535170.5
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGTTCCTTCAGCCGACTaGGAGCCTCTCGGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFVPSAD*EPLGAQ
Trigger: TTGGGCCCCGAGAGGCTCTCAGTCGGCTGAAGGAAC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGCGCCCGGCCAAGATTaGGCTCCCTCTTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCAPGQD*APSCNV
Trigger: AACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGACCCTCATGAGGGGGTaGAGGAATGTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLTLMRG*RNVGSR
Trigger: CCTGCTGCCCACATTCCTGCACCCCCTCATGAGGGT...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGCGTGTCCTGTAGGGTaGAATCCTGCCCCCACATGT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAACPVG*NPAPTC
Trigger: ACATGTGGGGGCAGGATTCCACCCTACAGGACACGC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACGAGGACTCCTGAACTaGATCCAGAGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASARGLLN*IQRHHP
Trigger: GGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCTCG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGCAGATGCCATCGCCTaGTCTCTGGGACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAADAIA*SLGLPS
Trigger: TGAGGGTAGTCCCAGAGACCAGGCGATGGCATCTGC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATCTCAGCCTGGAGTGTaGGGCCGTTACCGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASASQPGV*GRYRPL
Trigger: AAGAGGACGGTAACGGCCCCACACTCCAGGCTGAGA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTTCTTTACTATTCCGTaGGCCCCGGGAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFFFTIP*APGAAW
Trigger: CCAGGCCGCTCCCGGGGCTCACGGAATAGTAAAGAA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324306.11
CDS-3UTR TCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGACTTCTCTGGTTGAGGTaGGGGGAAGGCGCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRLLWLR*GEGARV
Trigger: TACCCGAGCGCCTTCCCCTCACCTCAACCAGAGAAG...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGTGGGGACAGACCCGTaGCTTCCCGTGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRVGTDP*LPVIQQ
Trigger: CTGCTGAATCACGGGAAGCCACGGGTCTGTCCCCAC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324306.11
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATGCATCAAGGGAGGCTaGGCTGTACTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASACIKGG*AVLRGS
Trigger: AGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCACCCGTGGCTTCCCGTaGTTCAGCAGTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCTRGFP*FSSHHS
Trigger: TGAATGATGACTGCTGAATCACGGGAAGCCACGGGT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324306.11
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGGTAACAGAAGCGCCTaGAGCGTTGGCGGAATATCT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAGNRSA*SVGGIS
Trigger: AGATATTCCGCCAACGCTTCAGGCGCTTCTGTTACC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAAAGCTCGAGGACTCCTaGACTGGATCCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLKLEDS*TGSRGT
Trigger: GGTGCCTCTGGATCCAGTTCAGGAGTCCTCGAGCTT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGCCTGGGAATCCGCTGTaGATAGTGCAGATGCCATCG +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLPGNPL*IVQMPS
Trigger: CGATGGCATCTGCACTATTCACAGCGGATTCCCAGG...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGGCCTGTTGTCCCTACTaGGATTCCTCCGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLACCPY*DSSEPD
Trigger: ATCTGGCTCGGAGGAATCTCAGTAGGGACAACAGGC...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCCAGGAACGCGCCAAATaGATCAAGGGAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFQERAK*IKGGWA
Trigger: AGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTG...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAAGCTGGGATTACAGGTaGCCACCATCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLSWDYR*PPSCPA
Trigger: AGCCGGGCATGATGGTGGGCACCTGTAATCCCAGCT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGGCTGGAGTGCAGTGTaGAATCTTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCGWSAV*NLGSLQ
Trigger: TTGCAGTGAGCCAAGATTGCACACTGCACTCCAGCC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAAGTGCTTGGGTCGTTaGCTGGAGTTCCACACCTCA +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAKCLGR*LEFHTS
Trigger: TGAGGTGTGGAACTCCAGGCAACGACCCAAGCACTT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAGCCATCTTGGCTCACTaGAACCTCCGCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLAILAH*NLRLPC
Trigger: ACATGGGAGGCGGAGGTTGCAGTGAGCCAAGATGGC...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCCATCGCCTGGTCTCTaGGACTACCCTCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYPSPGL*DYPHEG
Trigger: CCCCTCATGAGGGTAGTCCCAGAGACCAGGCGATGG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGCTTGGGTCGTTGCCTaGAGTTCCACACCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAAWVVA*SSTPHF
Trigger: AAAGTGAGGTGTGGAACTCCAGGCAACGACCCAAGC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGTGAGCCACCGTGCCTaGCCAGTCCTATCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIVSHRA*PVLSSP
Trigger: GGGGGAGGATAGGACTGGCCAGGCACGGTGGCTCAC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGTGAGCCACCGTGCCTaGCCAGTCCTATCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGVSHRA*PVLSSP
Trigger: GGGGGAGGATAGGACTGGCCAGGCACGGTGGCTCAC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGATATGGCCCCCACCCTaGGAAGTACTGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLIWPPP*EVLLSL
Trigger: CAGTGACAGCAGTACTTCCCAGGGTGGGGGCCATAT...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGATTTAGGGCAACTGTaGCTGCTTGGACCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCDLGQL*LLGPFP
Trigger: AGGGAAGGGTCCAAGCAGCCACAGTTGCCCTAAATC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCAAGAACCTGGTCAGCTaGAGCAGTCCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFKNLVS*SSPTWP
Trigger: TGGCCAAGTGGGACTGCTTCAGCTGACCAGGTTCTT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTACCTCCCAGATTTAGGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLPPRFR*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACCTAAATCTGGGAGG...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGATGTAGGGTGGAATCCTaGCCCCACATGTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRCRVES*PHMWSS
Trigger: GGAAGACCACATGTGGGGGCAGGATTCCACCCTACA...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGGAACTGTAGACTGGTaGACATACCCTCTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAGTVDW*TYPLFR
Trigger: CCGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGGGCTGGAGTGCAGTGTaGAATCTTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLGWSAV*NLGSLQ
Trigger: TTGCAGTGAGCCAAGATTGCACACTGCACTCCAGCC...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATCACCCAGGCTGGAGTaGAGTGTGCAATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLSPRLE*SVQSWL
Trigger: GAGCCAAGATTGCACACTGCACTCCAGCCTGGGTGA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGGTTTTAGCCTTGCCTaGCAGGCTGGAGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCGFSLA*QAGVET
Trigger: TGTTTCTACTCCAGCCTGGCAGGCAAGGCTAAAACC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTTGGCGGAATATCTCTaGGTCTGGAGGAGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFLAEYL*VWRRRV
Trigger: GACACGCCTCCTCCAGACCCAGAGATATTCCGCCAA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGATTGGCGGAATATCTCTaGGTCTGGAGGAGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRLAEYL*VWRRRV
Trigger: GACACGCCTCCTCCAGACCCAGAGATATTCCGCCAA...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGATGCATCAAGGGAGGCTaGGCTGTACTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRCIKGG*AVLRGS
Trigger: AGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCA...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGGCTTGGGTCGTTGCCTaGAGTTCCACACCTCACTTT +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLAWVVA*SSTPHF
Trigger: AAAGTGAGGTGTGGAACTCCAGGCAACGACCCAAGC...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCCTACTCTCGCTTCATaGAGAAGACCGTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCPTLAS*RRPSTD
Trigger: GTCAGTAGACGGTCTTCTCCATGAAGCGAGAGTAGG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGATACTCTTTCTCAGCCTaGAGTGTGGGGCCGTTACCG +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRYSFSA*SVGPLP
Trigger: CGGTAACGGCCCCACACTCCAGGCTGAGAAAGAGTA...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCCTCCCAGATTTAGGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYPPRFR*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACCTAAATCTGGGAGG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAGGTAACAGGAAAACATaGGATTGGGGTGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLGNRKT*DWGGVR
Trigger: GCGGACACCACCCCAATCTCATGTTTTCCTGTTACC...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTCTTCTCTGGTTGAGGTaGGGGGAAGGCGCTCGGGTA +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYILLWLR*GEGARV
Trigger: TACCCGAGCGCCTTCCCCTCACCTCAACCAGAGAAG...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAGGCACCATCCCCCTTaGGAGCATCTCAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSRHHPP*EHLRSM
Trigger: CATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAACCCTCATGAGGGGGTaGAGGAATGTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGTLMRG*RNVGSR
Trigger: CCTGCTGCCCACATTCCTGCACCCCCTCATGAGGGT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCAGGAACGCGCCAAATaGATCAAGGGAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSQERAK*IKGGWA
Trigger: AGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAGGAGTGAGCCACCGTaGCTGGCCAGTCCTATCCTC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGRSEPP*LASPIL
Trigger: GAGGATAGGACTGGCCAGGCACGGTGGCTCACTCCT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCACAGACTTCTTGCAATaGCACGACTGGATGCATCTG +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCTDFLQ*HDWMHL
Trigger: CAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAACAGACTTCTTGCAATaGCACGACTGGATGCATCTG +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASATDFLQ*HDWMHL
Trigger: CAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGGGGTTCTCTTGTTATaGGGAGGTCACACTGATAGT +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCGVLLL*GGHTDS
Trigger: ACTATCAGTGTGACCTCCCCATAACAAGAGAACCCC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTTCAAGGACAGCATGTaGCTGAAGATCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCFKDSM*LKIEAT
Trigger: GGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCCCTTGCCTGCCAGGCTaGAGTAGAAACAAATACCCC +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFPCLPG*SRNKYP
Trigger: GGGGTATTTGTTTCTACTCCAGCCTGGCAGGCAAGG...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAAGGCTGGAGTGCCAGTaGCATGATCTTAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLRLECQ*HDLSSL
Trigger: CAGTGAGCTAAGATCATGCCACTGGCACTCCAGCCT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGGACACAGAGAAATATaGCCCCCACCCTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRGHREI*PPPWEV
Trigger: TACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTCC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGGACACAGAGAAATATaGCCCCCACCCTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFGHREI*PPPWEV
Trigger: TACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTCC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGCCTGTTGTCCCTACTaGGATTCCTCCGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSACCPY*DSSEPD
Trigger: ATCTGGCTCGGAGGAATCTCAGTAGGGACAACAGGC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATCCTATAGCTGGCCCTaGATCTCTTTTCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASASYSWP*ISFLFP
Trigger: AGGAAAGAGAAAAGAGATTCAGGGCCAGCTATAGGA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGAGTTGGAGCTCAGACTaGAGCTTCTTCCCAATCCTT +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLSWSSD*SFFPIL
Trigger: AAGGATTGGGAAGAAGCTTCAGTCTGAGCTCCAACT...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAATGGCGGATAAGGCTTaGACTTCTCGTGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAMADKA*TSREAF
Trigger: AAATGCTTCACGAGAAGTTCAAGCCTTATCCGCCAT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGAAGTCAGTCTGAATaGGTGCCTCTTAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASARSQSE*VPLRCS
Trigger: TGAACACCTAAGAGGCACTCATTCAGACTGACTTCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGACCCTTGTCCTACTTaGGTGGCGATGACTACTTAC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRDPCPT*VAMTTY
Trigger: GTAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATCTCTGATGTCTATGTaGACTGTCCCACGTATCACA +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASASLMSM*TVPRIT
Trigger: TGTGATACGTGGGACAGTTCACATAGACATCAGAGA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGCGCCCGGCCAAGATTaGGCTCCCTCTTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGAPGQD*APSCNV
Trigger: AACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGAGAAGACCGTCTACTaGCAAGAGAATCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFEKTVY*QENPSP
Trigger: AGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAGAGAAGACCGTCTACTaGCAAGAGAATCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLEKTVY*QENPSP
Trigger: AGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTC...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCCTCCCAGATTTAGGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSPPRFR*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACCTAAATCTGGGAGG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGGTCTTTCTCCTGTTTTaGCCTCCTGGTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLVFLLF*PPGHVS
Trigger: AGAAACGTGACCAGGAGGGCAAAACAGGAGAAAGAC...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCCGAGAGTCCAAGAGTaGCTTAAAGGTATCCTCATT +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCPRVQE*LKGILI
Trigger: AATGAGGATACCTTTAAGGCACTCTTGGACTCTCGG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGGAACTGTAGACTGGTaGACATACCCTCTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFGTVDW*TYPLFR
Trigger: CCGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGGTTTTAGCCTTGCCTaGCAGGCTGGAGTAGAAACA +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRGFSLA*QAGVET
Trigger: TGTTTCTACTCCAGCCTGGCAGGCAAGGCTAAAACC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGCCATCTTGGCTCACTaGAACCTCCGCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGAILAH*NLRLPC
Trigger: ACATGGGAGGCGGAGGTTGCAGTGAGCCAAGATGGC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAGGAGTGAGCCACCGTaGCTGGCCAGTCCTATCCTC +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIRSEPP*LASPIL
Trigger: GAGGATAGGACTGGCCAGGCACGGTGGCTCACTCCT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGGGAAATGCCCACCTTaGTGTTCTCCTATCCCCAAT +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRGKCPP*CSPIPN
Trigger: ATTGGGGATAGGAGAACAGCAAGGTGGGCATTTCCC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAAATGCCACGACTGGATaGATCTGCACACAATTCCGG +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRNATTG*ICTQFR
Trigger: CCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTCGAGGACTCCTGAACTaGATCCAGAGGCACCATCCC +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIRGLLN*IQRHHP
Trigger: GGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCTCG...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAGCAGATGCCATCGCCTaGTCTCTGGGACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGADAIA*SLGLPS
Trigger: TGAGGGTAGTCCCAGAGACCAGGCGATGGCATCTGC...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCCTGCAGGGGCTGTGTaGAAGGATTATATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYPAGAV*KDYMPN
Trigger: GTTGGGCATATAATCCTTCCACACAGCCCCTGCAGG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTTCAAGGACAGCATGTaGCTGAAGATCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLFKDSM*LKIEAT
Trigger: GGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCATCTACCAAGCATCTaGACTCTTCGGAACCTAGTA +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCHLPSI*TLRNLV
Trigger: TACTAGGTTCCGAAGAGTCCAGATGCTTGGTAGATG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTTTATCAGACGCCACTaGCTTCCTAAAATGGACCAC +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCFIRRH*LPKMDH
Trigger: GTGGTCCATTTTAGGAAGCCAGTGGCGTCTGATAAA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTCCTATAGCTGGCCCTaGATCTCTTTTCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLSYSWP*ISFLFP
Trigger: AGGAAAGAGAAAAGAGATTCAGGGCCAGCTATAGGA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCAGTTGGAGCTCAGACTaGAGCTTCTTCCCAATCCTT +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFSWSSD*SFFPIL
Trigger: AAGGATTGGGAAGAAGCTTCAGTCTGAGCTCCAACT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAATCTCAGTACACTGCTaGGTTTCTCAGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAISVHC*VSQSNK
Trigger: TTTGTTGCTCTGAGAAACTCAGCAGTGTACTGAGAT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATGACCCTTGTCCTACTTaGGTGGCGATGACTACTTAC +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYDPCPT*VAMTTY
Trigger: GTAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTC...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCATCCTAGTGACTGGTTaGCTTGCAACACGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFILVTG*LATRFP
Trigger: GGGAAAACGTGTTGCAAGTCAACCAGTCACTAGGAT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTACGGGCCAAGAACTTTTaGATGACTATCTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLRAKNF*MTILNA
Trigger: GGCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCG...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAACAATAACAAGGGACTaGAGGTACAAAACACACACG +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASATITRD*RYKTHT
Trigger: CGTGTGTGTTTTGTACCTTCAGTCCCTTGTTATTGT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCACACAGTGGTCACCTaGCAGCTCAGAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSHTVVT*QLRGQL
Trigger: AAGTTGACCTCTGAGCTGTCAGGTGACCACTGTGTG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAATGAGGATGGTAGGATaGACCTGGTTAGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRMRMVG*TWLAGF
Trigger: AAAGCCAGCTAACCAGGTTCATCCTACCATCCTCAT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGGTAACAGGAAAACATaGGATTGGGGTGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSGNRKT*DWGGVR
Trigger: GCGGACACCACCCCAATCTCATGTTTTCCTGTTACC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCTCGACACAGACACAATaGGTCACAAAGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSSTQTQ*VTKAGS
Trigger: GCTTCCGGCCTTTGTGACTCATTGTGTCTGTGTCGA...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535170.5
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGACCCTCATGAGGGGGTaGAGGAATGTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVTLMRG*RNVGSR
Trigger: CCTGCTGCCCACATTCCTGCACCCCCTCATGAGGGT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAGCTGGGATTACAGGTaGCCACCATCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAISWDYR*PPSCPA
Trigger: AGCCGGGCATGATGGTGGGCACCTGTAATCCCAGCT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGGCTGGAGTGCAGTGTaGAATCTTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSGWSAV*NLGSLQ
Trigger: TTGCAGTGAGCCAAGATTGCACACTGCACTCCAGCC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAAGTGCTTGGGTCGTTaGCTGGAGTTCCACACCTCA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSKCLGR*LEFHTS
Trigger: TGAGGTGTGGAACTCCAGGCAACGACCCAAGCACTT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAACATCTTCAAATAGCTaGTTCAAGGACAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASATSSNS*FKDSMW
Trigger: CCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATAGAATCCATCCCCTTTaGACACAGTGGTCACCTGAC +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYRIHPL*TQWSPD
Trigger: GTCAGGTGACCACTGTGTGCAAAGGGGATGGATTCT...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCTTGGTCTCCCAAAGTaGTGGGATTACAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSLGLPK*WDYRPE
Trigger: CTCAGGCCTGTAATCCCAGCACTTTGGGAGACCAAG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATAATGCCACGACTGGATaGATCTGCACACAATTCCGG +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYNATTG*ICTQFR
Trigger: CCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATT...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGGACAAGATTTTCCTaGATAACCACAACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASARTRFS*ITTTCL
Trigger: GAGACAGGTTGTGGTTATGCAGGAAAATCTTGTCCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGAGACTTTGTTCCCGTaGGAACTTCTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSETLFP*ELLQGW
Trigger: CCACCCCTGAAGAAGTTCCCACGGGAACAAAGTCTC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGGGATTTTACCATGTTaGCCAGGCTGGTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRGILPC*PGWSQN
Trigger: GTTTTGAGACCAGCCTGGCCAACATGGTAAAATCCC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGTGAGCCACCGTGCCTaGCCAGTCCTATCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAVSHRA*PVLSSP
Trigger: GGGGGAGGATAGGACTGGCCAGGCACGGTGGCTCAC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAACATGAGATTGGGGTaGTGTCCGCTATTAAATGGA +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASANMRLG*CPLLNG
Trigger: TCCATTTAATAGCGGACACCACCCCAATCTCATGTT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGATTTAGGGCAACTGTaGCTGCTTGGACCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSDLGQL*LLGPFP
Trigger: AGGGAAGGGTCCAAGCAGCCACAGTTGCCCTAAATC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATCCGAGACGAATGTTTaGAGTGGGACTGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKSETNV*SGTGWP
Trigger: AGGCCACCCAGTCCCACTTCAAACATTCGTCTCGGA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAGCCTGTTGTCCCTACTaGGATTCCTCCGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKACCPY*DSSEPD
Trigger: ATCTGGCTCGGAGGAATCTCAGTAGGGACAACAGGC...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGATCCTATAGCTGGCCCTaGATCTCTTTTCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRSYSWP*ISFLFP
Trigger: AGGAAAGAGAAAAGAGATTCAGGGCCAGCTATAGGA...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAATGGCGGATAAGGCTTaGACTTCTCGTGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLMADKA*TSREAF
Trigger: AAATGCTTCACGAGAAGTTCAAGCCTTATCCGCCAT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGAAATACCCCACAACCTaGGGATTTTACTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLKYPTT*GFYFSS
Trigger: GGAAGAGAAGTAAAATCCTCAGGTTGTGGGGTATTT...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCTTCACTGTTTGCTCTaGAACTTCACTTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCLHCLL*NFTFSE
Trigger: CTCAGAAAAAGTGAAGTTTCAGAGCAAACAGTGAAG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAAAGAACCTGGTCAGCTaGAGCAGTCCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKKNLVS*SSPTWP
Trigger: TGGCCAAGTGGGACTGCTTCAGCTGACCAGGTTCTT...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGCCTCCCATGTTCAAGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVPPMFK*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACTTGAACATGGGAGG...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATTCCCAAACTTTCGTTTaGCCTGCAGAGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYSQTFV*PAELEM
Trigger: CATCTCCAACTCTGCAGGTCAAACGAAAGTTTGGGA...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGATGCTCTTCTCTGGTTaGGGTGAGGGGAAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVMLFSG*GEGKAL
Trigger: GAGCGCCTTCCCCTCACCTCAACCAGAGAAGAGCAT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGATGCTCTTCTCTGGTTaGGGTGAGGGGAAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLMLFSG*GEGKAL
Trigger: GAGCGCCTTCCCCTCACCTCAACCAGAGAAGAGCAT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATAGGATGGAAAGAAACTaGTCTAGCACCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYRMERN*SSTRSS
Trigger: GGAGCTTCTGGTGCTAGAGCAGTTTCTTTCCATCCT...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATCGGGGCGGTATTCCTaGAGCCAGACCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETSGRYS*SQTWSS
Trigger: GGAGCTCCAGGTCTGGCTGCAGGAATACCGCCCCGA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTACCACCCTGGGGAAATaGGCTCCCATAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYITTLGK*APIILL
Trigger: CAGGAGAATTATGGGAGCGCATTTCCCCAGGGTGGT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATGTCTTTCTCCTGTTTTaGCCTCCTGGTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYVFLLF*PPGHVS
Trigger: AGAAACGTGACCAGGAGGGCAAAACAGGAGAAAGAC...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGGAACTGTAGACTGGTaGACATACCCTCTCTTTCGG +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSGTVDW*TYPLFR
Trigger: CCGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAACAGAAAAGTCACTGTaGACTATGACGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLTEKSL*TMTMAQ
Trigger: CTGTGCCATCGTCATAGTGCACAGTGACTTTTCTGT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGAGCTGGGATTACAGGTaGCCACCATCATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVSWDYR*PPSCPA
Trigger: AGCCGGGCATGATGGTGGGCACCTGTAATCCCAGCT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATACGACTGGATGCATCTaGACACAATTCCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYTTGCI*TQFREM
Trigger: CATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGT...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTACACCCTGGGAAGTACTaGTGTCACTGTTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLHPGKY*CHCLSV
Trigger: TACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGGCGTGTCCTGTAGGGTaGAATCCTGCCCCCACATGT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVACPVG*NPAPTC
Trigger: ACATGTGGGGGCAGGATTCCACCCTACAGGACACGC...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCAAATTCATCACGATTaGAACATACCGACGGAATTC +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCQIHHD*NIPTEF
Trigger: GAATTCCGTCGGTATGTTCCAATCGTGATGAATTTG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAATTACTGATTTTGCTTaGCTATCCCACCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRITDFA*LSHPLP
Trigger: GGGTAAGGGGTGGGATAGCCAAGCAAAATCAGTAAT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAATTCGAGGTTTCCAATaGTTACTTTTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAIRGFQ*LLLVEE
Trigger: CTCCTCCACTAAAAGTAACCATTGGAAACCTCGAAT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGATTTATCAGACGCCACTaGCTTCCTAAAATGGACCAC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRFIRRH*LPKMDH
Trigger: GTGGTCCATTTTAGGAAGCCAGTGGCGTCTGATAAA...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 72 bp TGCAAAATGCTTCCCGAGCTTCATCAGACAGACTTCTaGCAATGCCACGACTGGATGCATCTGCACACAATT +
Preference number: 4 (lower is better)
Translates to: CKMLPELHQTDF*QCHDWMHLHTI
Trigger: AATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCATTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAGGTAACAGAAGCGCCTaGAGCGTTGGCGGAATATCT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKGNRSA*SVGGIS
Trigger: AGATATTCCGCCAACGCTTCAGGCGCTTCTGTTACC...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTCGTGGAGCCAATCTTaGTCTTTCAACTATTATGTT +
Preference number: 4 (lower is better)
Translates to: KVTVHYDDGTASHISVHCSWSQS*SFNYYV
Trigger: AACATAATAGTTGAAAGATCAAGATTGGCTCCACGA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCGGGCCAAGAACTTTTaGATGACTATCTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSRAKNF*MTILNA
Trigger: GGCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCAAATACCCCACAACCTaGGGATTTTACTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFKYPTT*GFYFSS
Trigger: GGAAGAGAAGTAAAATCCTCAGGTTGTGGGGTATTT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACGCTGCTCCGTTCTGTaGACCGACTTTTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGRCSVL*TDFLST
Trigger: TGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTCGCTGCTCCGTTCTGTaGACCGACTTTTTGTCTACA +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIRCSVL*TDFLST
Trigger: TGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCG...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGAACCTGGTCAGCTaGAGCAGTCCCACTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLKNLVS*SSPTWP
Trigger: TGGCCAAGTGGGACTGCTTCAGCTGACCAGGTTCTT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAGGATGGAAAGAAACTaGTCTAGCACCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSRMERN*SSTRSS
Trigger: GGAGCTTCTGGTGCTAGAGCAGTTTCTTTCCATCCT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR GCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAACCACCCTGGGGAAATaGGCTCCCATAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKTTLGK*APIILL
Trigger: CAGGAGAATTATGGGAGCGCATTTCCCCAGGGTGGT...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATGAGGGCAAAAGTCCTTaGTCAAAAGCACAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYEGKSP*SKAQEF
Trigger: AAACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTC...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTAGAATCCATCCCCTTTaGACACAGTGGTCACCTGAC +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIRIHPL*TQWSPD
Trigger: GTCAGGTGACCACTGTGTGCAAAGGGGATGGATTCT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAAGGAGTGAGCCACCGTaGCTGGCCAGTCCTATCCTC +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPRSEPP*LASPIL
Trigger: GAGGATAGGACTGGCCAGGCACGGTGGCTCACTCCT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGCTCACTGCAACCTCTaGCTCCCAGATTTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIAHCNL*LPDLGD
Trigger: ATCACCTAAATCTGGGAGGCAGAGGTTGCAGTGAGC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAAACTTTCGTTTGACCTaGAGAGTTGGAGATGGCTTA +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRNFRLT*RVGDGL
Trigger: TAAGCCATCTCCAACTCTGCAGGTCAAACGAAAGTT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAAACTTTCGTTTGACCTaGAGAGTTGGAGATGGCTTA +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLNFRLT*RVGDGL
Trigger: TAAGCCATCTCCAACTCTGCAGGTCAAACGAAAGTT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAAGGACAAGATTTTCCTaGATAACCACAACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRRTRFS*ITTTCL
Trigger: GAGACAGGTTGTGGTTATGCAGGAAAATCTTGTCCT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCACAGTAACTTCATTCTaGGGGTATACAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFTVTSF*GYTETS
Trigger: GCTTGTCTCTGTATACCCGCAGAATGAAGTTACTGT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAACAGTAACTTCATTCTaGGGGTATACAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLTVTSF*GYTETS
Trigger: GCTTGTCTCTGTATACCCGCAGAATGAAGTTACTGT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACCATCGCCTGGTCTCTaGGACTACCCTCATGAGGGG +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETPSPGL*DYPHEG
Trigger: CCCCTCATGAGGGTAGTCCCAGAGACCAGGCGATGG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATATCTTCACCATTGCCTaGGAATCCGCTGTGAATAGT +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYIFTIA*ESAVNS
Trigger: ACTATTCACAGCGGATTCCCAGGCAATGGTGAAGAT...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACCTGTTTTGCCCTCCTaGTCACGTTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGPVLPS*SRFSPN
Trigger: GTTTGGAGAGAAACGTGACCAGGAGGGCAAAACAGG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATGCTTTTCTCTTGTGTaGAAATCTCACGTGGATTAT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASACFSLV*KSHVDY
Trigger: ATAATCCACGTGAGATTTCCACACAAGAGAAAAGCA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATCAAGTGCTAACTTGTaGAGAAATGCATTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASASSANL*RNAFRS
Trigger: ACTCCTAAATGCATTTCTCCACAAGTTAGCACTTGA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGGGGTTCTCTTGTTATaGGGAGGTCACACTGATAGT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSGVLLL*GGHTDS
Trigger: ACTATCAGTGTGACCTCCCCATAACAAGAGAACCCC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAAATATCCTAGTGACTaGTTGACTTGCAACACGTTT +
Preference number: 4 (lower is better)
Translates to: SRASSDRLLAMPRLDASAKYPSD*LTCNTF
Trigger: AAACGTGTTGCAAGTCAACCAGTCACTAGGATATTT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTCCTACTCTCGCTTCATaGAGAAGACCGTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIPTLAS*RRPSTD
Trigger: GTCAGTAGACGGTCTTCTCCATGAAGCGAGAGTAGG...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACCTACTCTCGCTTCATaGAGAAGACCGTCTACTGAC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGPTLAS*RRPSTD
Trigger: GTCAGTAGACGGTCTTCTCCATGAAGCGAGAGTAGG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGATATGGCCCCCACCCTaGGAAGTACTGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVIWPPP*EVLLSL
Trigger: CAGTGACAGCAGTACTTCCCAGGGTGGGGGCCATAT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCAACATGAGATTGGGGTaGTGTCCGCTATTAAATGGA +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFNMRLG*CPLLNG
Trigger: TCCATTTAATAGCGGACACCACCCCAATCTCATGTT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATCTAAACGAAGAAGCTaGGAACTGACAAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLSKRRS*ELTKQD
Trigger: GTCCTGTTTTGTCAGTTCCCAGCTTCTTCGTTTAGA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 72 bp GGGTTCTCTTGTTATGGGGAGGTCACACTGATAGTCTaGAGGTTTGTTCTCAGTCTATGTTTCTGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: GFSCYGEVTLIV*RFVLSLCFCFR
Trigger: GCGGAAACAGAAACATAGACTGAGAACAAACCTCAAGACTATCAGTGTGACCTCCCCATAACAAGAGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTCCTGGGAGGTTTTATaGTGTGTTTCTTTACTATTC +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLSWEVL*CVSLLF
Trigger: GAATAGTAAAGAAACACATCATAAAACCTCCCAGGA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAAAGCTCGAGGACTCCTaGACTGGATCCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETKLEDS*TGSRGT
Trigger: GGTGCCTCTGGATCCAGTTCAGGAGTCCTCGAGCTT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTAGTTGGAGCTCAGACTaGAGCTTCTTCCCAATCCTT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYISWSSD*SFFPIL
Trigger: AAGGATTGGGAAGAAGCTTCAGTCTGAGCTCCAACT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTCGTGGAGCCAATCTTaGTCTTTCAACTATTATGTT +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLSWSQS*SFNYYV
Trigger: AACATAATAGTTGAAAGATCAAGATTGGCTCCACGA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAGACCCTTGTCCTACTTaGGTGGCGATGACTACTTAC +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKDPCPT*VAMTTY
Trigger: GTAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTC...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAAGGAAGATGTCTCCATaGAACGGAATTAAATGTGAG +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLRKMSP*NGIKCE
Trigger: CTCACATTTAATTCCGTTTCATGGAGACATCTTCCT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAAGGAAGATGTCTCCATaGAACGGAATTAAATGTGAG +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRRKMSP*NGIKCE
Trigger: CTCACATTTAATTCCGTTTCATGGAGACATCTTCCT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCTCTCTGATGTCTATGTaGACTGTCCCACGTATCACA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSSLMSM*TVPRIT
Trigger: TGTGATACGTGGGACAGTTCACATAGACATCAGAGA...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGCGCCCGGCCAAGATTaGGCTCCCTCTTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAAPGQD*APSCNV
Trigger: AACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAGAGAAGACCGTCTACTaGCAAGAGAATCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKEKTVY*QENPSP
Trigger: AGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTC...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACCTCCCATGTTCAAGTaGTCCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETPPMFK*SSCLSL
Trigger: GAGGCTGAGGCAGGAGGATCACTTGAACATGGGAGG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTATGAGGATGGTAGGATaGACCTGGTTAGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIMRMVG*TWLAGF
Trigger: AAAGCCAGCTAACCAGGTTCATCCTACCATCCTCAT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATCCCAAACTTTCGTTTaGCCTGCAGAGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGSQTFV*PAELEM
Trigger: CATCTCCAACTCTGCAGGTCAAACGAAAGTTTGGGA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTTCCCAAACTTTCGTTTaGCCTGCAGAGTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYISQTFV*PAELEM
Trigger: CATCTCCAACTCTGCAGGTCAAACGAAAGTTTGGGA...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGGTAACAGGAAAACATaGGATTGGGGTGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLGNRKT*DWGGVR
Trigger: GCGGACACCACCCCAATCTCATGTTTTCCTGTTACC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCATGCTCTTCTCTGGTTaGGGTGAGGGGAAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFMLFSG*GEGKAL
Trigger: GAGCGCCTTCCCCTCACCTCAACCAGAGAAGAGCAT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGATTTAGGCTTATGCTaGCCTCGTTGTAAAATCTGT +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRDLGLC*PRCKIC
Trigger: ACAGATTTTACAACGAGGTCAGCATAAGCCTAAATC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGATTTAGGCTTATGCTaGCCTCGTTGTAAAATCTGT +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFDLGLC*PRCKIC
Trigger: ACAGATTTTACAACGAGGTCAGCATAAGCCTAAATC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGTCTTTCTCCTGTTTTaGCCTCCTGGTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIVFLLF*PPGHVS
Trigger: AGAAACGTGACCAGGAGGGCAAAACAGGAGAAAGAC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCCAGGAACGCGCCAAATaGATCAAGGGAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAQERAK*IKGGWA
Trigger: AGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTG...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCCGAGAGTCCAAGAGTaGCTTAAAGGTATCCTCATT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSPRVQE*LKGILI
Trigger: AATGAGGATACCTTTAAGGCACTCTTGGACTCTCGG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATGTGAAACAGTCTCCTaGCATCAGCTTCTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGCETVS*HQLLGS
Trigger: GCTACCTAGAAGCTGATGGCAGGAGACTGTTTCACA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAGCACCTGGCCTCAGTTaGTTTCTAGAGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKAPGLS*FLEGKS
Trigger: ACTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGC...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAAGAATCCATCCCCTTTaGACACAGTGGTCACCTGAC +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIRIHPL*TQWSPD
Trigger: GTCAGGTGACCACTGTGTGCAAAGGGGATGGATTCT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCGCCATCTTGGCTCACTaGAACCTCCGCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFAILAH*NLRLPC
Trigger: ACATGGGAGGCGGAGGTTGCAGTGAGCCAAGATGGC...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAACAGACTTCTTGCAATaGCACGACTGGATGCATCTG +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGTDFLQ*HDWMHL
Trigger: CAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTATCAGACAGACTTCTTaGAATGCCACGACTGGATGC +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIIRQTS*NATTGC
Trigger: GCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGAT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATCACTCCTTAATGAGTaGTTGCTGAAGGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLSLLNE*LLKGEN
Trigger: ATTTTCTCCCTTCAGCAAGCACTCATTAAGGAGTGA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAATCTCTAATCTAACATaGTTTGTCCTTGCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRISNLT*FVLARA
Trigger: TGCCCTAGCAAGGACAAAGCATGTTAGATTAGAGAT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGCAGATGCCATCGCCTaGTCTCTGGGACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAADAIA*SLGLPS
Trigger: TGAGGGTAGTCCCAGAGACCAGGCGATGGCATCTGC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGATGTGGAAATCTCACGTaGATTATCCGTAAGATTAGC +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRCGNLT*IIRKIS
Trigger: GCTAATCTTACGGATAATCCACGTGAGATTTCCACA...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTCAAGTGCTAACTTGTaGAGAAATGCATTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLSSANL*RNAFRS
Trigger: ACTCCTAAATGCATTTCTCCACAAGTTAGCACTTGA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGGGGTTCTCTTGTTATaGGGAGGTCACACTGATAGT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIGVLLL*GGHTDS
Trigger: ACTATCAGTGTGACCTCCCCATAACAAGAGAACCCC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGCCTTGCCTGCCAGGCTaGAGTAGAAACAAATACCCC +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLPCLPG*SRNKYP
Trigger: GGGGTATTTGTTTCTACTCCAGCCTGGCAGGCAAGG...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGAGGCTGGAGTGCCAGTaGCATGATCTTAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVRLECQ*HDLSSL
Trigger: CAGTGAGCTAAGATCATGCCACTGGCACTCCAGCCT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCATCTCAGCCTGGAGTGTaGGGCCGTTACCGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPSQPGV*GRYRPL
Trigger: AAGAGGACGGTAACGGCCCCACACTCCAGGCTGAGA...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCTCTCAGCCTGGAGTGTaGGGCCGTTACCGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSASQPGV*GRYRPL
Trigger: AAGAGGACGGTAACGGCCCCACACTCCAGGCTGAGA...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAACTGGCTTCCTAAAATaGACCACTGACTATGTATGT +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRTGFLK*TTDYVC
Trigger: ACATACATAGTCAGTGGTCCATTTTAGGAAGCCAGT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 72 bp GGAGCCAATCTTGATCTTTCAACTATTATGTTGTGGTaGCCGAGAGTCCAAGAGTGCCTTAAAGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: GANLDLSTIMLW*PRVQECLKGIL
Trigger: GAGGATACCTTTAAGGCACTCTTGGACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAGATTGGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTCCTGGGAGGTTTTATaGTGTGTTTCTTTACTATTC +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFSWEVL*CVSLLF
Trigger: GAATAGTAAAGAAACACATCATAAAACCTCCCAGGA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCATCCGAGACGAATGTTTaGAGTGGGACTGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPSETNV*SGTGWP
Trigger: AGGCCACCCAGTCCCACTTCAAACATTCGTCTCGGA...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACCTGGGAATCCGCTGTaGATAGTGCAGATGCCATCG +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPPGNPL*IVQMPS
Trigger: CGATGGCATCTGCACTATTCACAGCGGATTCCCAGG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACCTGGGAATCCGCTGTaGATAGTGCAGATGCCATCG +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETPGNPL*IVQMPS
Trigger: CGATGGCATCTGCACTATTCACAGCGGATTCCCAGG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATCGTGGAGCCAATCTTaGTCTTTCAACTATTATGTT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLSWSQS*SFNYYV
Trigger: AACATAATAGTTGAAAGATCAAGATTGGCTCCACGA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTAGAAGTCAGTCTGAATaGGTGCCTCTTAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIRSQSE*VPLRCS
Trigger: TGAACACCTAAGAGGCACTCATTCAGACTGACTTCT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACTACTTGAGTGGCGATaGCTACTTACACAGCTCACA +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAILLEWR*LLTQLT
Trigger: TGTGAGCTGTGTAAGTAGTCATCGCCACTCAAGTAG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCAACAAAACTCAAAAGTaGTGGCTGAGTTATATCAGC +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFNKTQK*WLSYIS
Trigger: GCTGATATAACTCAGCCATCACTTTTGAGTTTTGTT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCAATTACACTTTGCACTaGGCATCTGATAAACGAATG +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFNYTLH*ASDKRM
Trigger: CATTCGTTTATCAGATGCTCAGTGCAAAGTGTAATT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCTTCACTGTTTGCTCTaGAACTTCACTTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYLHCLL*NFTFSE
Trigger: CTCAGAAAAAGTGAAGTTTCAGAGCAAACAGTGAAG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAGCCCCCTCGTATCTCTaGGAAGTTGCTCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETAPSYL*EVAQSR
Trigger: CCTACTCTGAGCAACTTCTCAGAGATACGAGGGGGC...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGCCCCCTCGTATCTCTaGGAAGTTGCTCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAAPSYL*EVAQSR
Trigger: CCTACTCTGAGCAACTTCTCAGAGATACGAGGGGGC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATTAATGAGTGCTTGCTaGAGGGAGAAAATTCCATTT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLLMSAC*REKIPF
Trigger: AAATGGAATTTTCTCCCTTCAGCAAGCACTCATTAA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCATGTAGGGTGGAATCCTaGCCCCACATGTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPCRVES*PHMWSS
Trigger: GGAAGACCACATGTGGGGGCAGGATTCCACCCTACA...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR GCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAATTTCACTATGCGTGTaGTTTTCTCTTGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLISLCV*FSLVWK
Trigger: TTTCCACACAAGAGAAAAGCACACGCATAGTGAAAT...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGTCAGTCTGAATGAGTaGCTCTTAGGTGTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIVSLNE*LLGVQY
Trigger: GTACTGAACACCTAAGAGGCACTCATTCAGACTGAC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGGCACCTGGCCTCAGTTaGTTTCTAGAGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVAPGLS*FLEGKS
Trigger: ACTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGC...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATCACCCAGGCTGGAGTaGAGTGTGCAATCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETSPRLE*SVQSWL
Trigger: GAGCCAAGATTGCACACTGCACTCCAGCCTGGGTGA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCACATCTTCAAATAGCTaGTTCAAGGACAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSTSSNS*FKDSMW
Trigger: CCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGGCTCACTGCAACCTCTaGCTCCCAGATTTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVAHCNL*LPDLGD
Trigger: ATCACCTAAATCTGGGAGGCAGAGGTTGCAGTGAGC...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGAATGCCACGACTGGATaGATCTGCACACAATTCCGG +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVNATTG*ICTQFR
Trigger: CCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGCCTGTTTTGCCCTCCTaGTCACGTTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLPVLPS*SRFSPN
Trigger: GTTTGGAGAGAAACGTGACCAGGAGGGCAAAACAGG...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAGTGTGGATTATTTTATaGCGGATAAGGCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLVWIIL*RIRLEL
Trigger: AAGTTCAAGCCTTATCCGCCATAAAATAATCCACAC...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATGCATCAAGGGAGGCTaGGCTGTACTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETCIKGG*AVLRGS
Trigger: AGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATGCTTTTCTCTTGTGTaGAAATCTCACGTGGATTAT +
Preference number: 4 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLCFSLV*KSHVDY
Trigger: ATAATCCACGTGAGATTTCCACACAAGAGAAAAGCA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACGGTTTAAAAGAACCTaGTCAGCTGAAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIRFKRT*SAEAVP
Trigger: TGGGACTGCTTCAGCTGACCAGGTTCTTTTAAACCG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTTTGCAATGCCACGACTaGATGCATCTGCACACAATT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYILQCHD*MHLHTI
Trigger: AATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAA...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCATGAACCTGGTTAGCTaGCTTTGGATAAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSMNLVS*LWISRS
Trigger: TGATCTGCTTATCCAAAGCCAGCTAACCAGGTTCAT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCATATGGCCCCCACCCTaGGAAGTACTGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAIWPPP*EVLLSL
Trigger: CAGTGACAGCAGTACTTCCCAGGGTGGGGGCCATAT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGAGACATTCTGTATTGTaGGATGTCAAAAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLRHSVL*DVKSIS
Trigger: GGAAATACTTTTGACATCCCACAATACAGAATGTCT...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAACATGAGATTGGGGTaGTGTCCGCTATTAAATGGA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSNMRLG*CPLLNG
Trigger: TCCATTTAATAGCGGACACCACCCCAATCTCATGTT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATACTCTTTCTCAGCCTaGAGTGTGGGGCCGTTACCG +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETYSFSA*SVGPLP
Trigger: CGGTAACGGCCCCACACTCCAGGCTGAGAAAGAGTA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTCATCTACCAAGCATCTaGACTCTTCGGAACCTAGTA +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIHLPSI*TLRNLV
Trigger: TACTAGGTTCCGAAGAGTCCAGATGCTTGGTAGATG...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 72 bp TTTCGTGGAGCCAATCTTGATCTTTCAACTATTATGTaGTGGTTGCCGAGAGTCCAAGAGTGCCTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: FRGANLDLSTIM*WLPRVQECLKG
Trigger: ACCTTTAAGGCACTCTTGGACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAGATTGGCTCCACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 72 bp CTCAAGGGAAAGTCTCAAACTATATATGGGGTTCTCTaGTTATGGGGAGGTCACACTGATAGTCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LKGKSQTIYGVL*LWGGHTDSLEV
Trigger: AACCTCAAGACTATCAGTGTGACCTCCCCATAACAAGAGAACCCCATATATAGTTTGAGACTTTCCCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCCTCCAGGAACTGACTTaGTCCAAACAGGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSALQELT*SKQGLC
Trigger: GCACAGACCCTGTTTGGATCAAGTCAGTTCCTGGAG...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324306.11
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAGAACACTGCTGATGTaGCTAGAAGGATCCTTAAGT +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGRTLLM*LEGSLS
Trigger: ACTTAAGGATCCTTCTAGTCACATCAGCAGTGTTCT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTATCTCAGTACACTGCTaGGTTTCTCAGAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIISVHC*VSQSNK
Trigger: TTTGTTGCTCTGAGAAACTCAGCAGTGTACTGAGAT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGCTACTTGAGTGGCGATaGCTACTTACACAGCTCACA +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLLLEWR*LLTQLT
Trigger: TGTGAGCTGTGTAAGTAGTCATCGCCACTCAAGTAG...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGATCCTAGTGACTGGTTaGCTTGCAACACGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVILVTG*LATRFP
Trigger: GGGAAAACGTGTTGCAAGTCAACCAGTCACTAGGAT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCTCAAAAGTGATGGCTaGGTTATATCAGCATATAGT +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYLKSDG*VISAYS
Trigger: ACTATATGCTGATATAACTCAGCCATCACTTTTGAG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATCCGATGCTAAGGGCTaGGATGTGATTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKSDAKG*DVIKGF
Trigger: AAAGCCTTTAATCACATCTCAGCCCTTAGCATCGGA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCCACACAGTGGTCACCTaGCAGCTCAGAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAHTVVT*QLRGQL
Trigger: AAGTTGACCTCTGAGCTGTCAGGTGACCACTGTGTG...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACACACAGTGGTCACCTaGCAGCTCAGAGGTCAACTT +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPHTVVT*QLRGQL
Trigger: AAGTTGACCTCTGAGCTGTCAGGTGACCACTGTGTG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGATGAGGATGGTAGGATaGACCTGGTTAGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLMRMVG*TWLAGF
Trigger: AAAGCCAGCTAACCAGGTTCATCCTACCATCCTCAT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAAACAAGACAATGCCTaGGTTAGCCCTCTATATAGA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSKQDNA*VSPLYR
Trigger: TCTATATAGAGGGCTAACTCAGGCATTGTCTTGTTT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAACCACCCTGGGGAAATaGGCTCCCATAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPTTLGK*APIILL
Trigger: CAGGAGAATTATGGGAGCGCATTTCCCCAGGGTGGT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCATTTGGAGTTGTTGTTaGCATTTCAGTAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFIWSCC*HFSRTD
Trigger: ATCAGTTCTACTGAAATGGCAACAACAACTCCAAAT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAATTTGGAGTTGTTGTTaGCATTTCAGTAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRIWSCC*HFSRTD
Trigger: ATCAGTTCTACTGAAATGGCAACAACAACTCCAAAT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGTGTGAAACAGTCTCCTaGCATCAGCTTCTAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVCETVS*HQLLGS
Trigger: GCTACCTAGAAGCTGATGGCAGGAGACTGTTTCACA...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGGGTTTTTCTTCCGTTaGATGGGTAGAAATATCCTA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSGFFFR*MGRNIL
Trigger: TAGGATATTTCTACCCATGCAACGGAAGAAAAACCC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCCTTGGTCTCCCAAAGTaGTGGGATTACAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSALGLPK*WDYRPE
Trigger: CTCAGGCCTGTAATCCCAGCACTTTGGGAGACCAAG...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCTTGGTCTCCCAAAGTaGTGGGATTACAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFLGLPK*WDYRPE
Trigger: CTCAGGCCTGTAATCCCAGCACTTTGGGAGACCAAG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGACGACTGGATGCATCTaGACACAATTCCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVTTGCI*TQFREM
Trigger: CATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGGGAATATTGCAAAATaGTTCCCGAGCTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIGNIAK*FPSFIR
Trigger: TCTGATGAAGCTCGGGAAGCATTTTGCAATATTCCC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAACACCCTGGGAAGTACTaGTGTCACTGTTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKHPGKY*CHCLSV
Trigger: TACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAACTTTCGTTTGACCTaGAGAGTTGGAGATGGCTTA +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGNFRLT*RVGDGL
Trigger: TAAGCCATCTCCAACTCTGCAGGTCAAACGAAAGTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCATCTCTAATCTAACATaGTTTGTCCTTGCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSISNLT*FVLARA
Trigger: TGCCCTAGCAAGGACAAAGCATGTTAGATTAGAGAT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAATCTTCACCATTGCCTaGGAATCCGCTGTGAATAGT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKIFTIA*ESAVNS
Trigger: ACTATTCACAGCGGATTCCCAGGCAATGGTGAAGAT...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGAGACTTTGTTCCCGTaGGAACTTCTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAETLFP*ELLQGW
Trigger: CCACCCCTGAAGAAGTTCCCACGGGAACAAAGTCTC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCCCTGCAGGGGCTGTGTaGAAGGATTATATGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAPAGAV*KDYMPN
Trigger: GTTGGGCATATAATCCTTCCACACAGCCCCTGCAGG...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATCAACTATTATGTTGTaGTTGCCGAGAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGSTIML*LPRVQE
Trigger: CTCTTGGACTCTCGGCAACCACAACATAATAGTTGA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTTCAACTATTATGTTGTaGTTGCCGAGAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYISTIML*LPRVQE
Trigger: CTCTTGGACTCTCGGCAACCACAACATAATAGTTGA...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTAACCATTTGGTCTCATaGACTTTAGCTGCTGATCAG +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYINHLVS*TLAADQ
Trigger: CTGATCAGCAGCTAAAGTCCATGAGACCAAATGGTT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGGGATTTTACCATGTTaGCCAGGCTGGTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLGILPC*PGWSQN
Trigger: GTTTTGAGACCAGCCTGGCCAACATGGTAAAATCCC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCGCTTGGGTCGTTGCCTaGAGTTCCACACCTCACTTT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFAWVVA*SSTPHF
Trigger: AAAGTGAGGTGTGGAACTCCAGGCAACGACCCAAGC...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCGGACACAGAGAAATATaGCCCCCACCCTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFGHREI*PPPWEV
Trigger: TACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTCC...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAGATTTAGGGCAACTGTaGCTGCTTGGACCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETDLGQL*LLGPFP
Trigger: AGGGAAGGGTCCAAGCAGCCACAGTTGCCCTAAATC...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAATTACTGATTTTGCTTaGCTATCCCACCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIITDFA*LSHPLP
Trigger: GGGTAAGGGGTGGGATAGCCAAGCAAAATCAGTAAT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCACTGGCTTCCTAAAATaGACCACTGACTATGTATGT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSTGFLK*TTDYVC
Trigger: ACATACATAGTCAGTGGTCCATTTTAGGAAGCCAGT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 72 bp AAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTaGGTTCCATATAAAACCATTTGGTCTCATGGACTT +
Preference number: 4 (lower is better)
Translates to: KNDHCAVLAPTS*VPYKTIWSHGL
Trigger: AAGTCCATGAGACCAAATGGTTTTATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAAGAACACTGCTGATGTaGCTAGAAGGATCCTTAAGT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKRTLLM*LEGSLS
Trigger: ACTTAAGGATCCTTCTAGTCACATCAGCAGTGTTCT...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGAGAAGTCAGTCTGAATaGGTGCCTCTTAGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVRSQSE*VPLRCS
Trigger: TGAACACCTAAGAGGCACTCATTCAGACTGACTTCT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGATTTAGGCTTATGCTaGCCTCGTTGTAAAATCTGT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIDLGLC*PRCKIC
Trigger: ACAGATTTTACAACGAGGTCAGCATAAGCCTAAATC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAAACAAGACAATGCCTaGGTTAGCCCTCTATATAGA +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGKQDNA*VSPLYR
Trigger: TCTATATAGAGGGCTAACTCAGGCATTGTCTTGTTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGTCAGTCTGAATGAGTaGCTCTTAGGTGTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLVSLNE*LLGVQY
Trigger: GTACTGAACACCTAAGAGGCACTCATTCAGACTGAC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAGCACCTGGCCTCAGTTaGTTTCTAGAGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETAPGLS*FLEGKS
Trigger: ACTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGC...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGCTCACTGCAACCTCTaGCTCCCAGATTTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAAHCNL*LPDLGD
Trigger: ATCACCTAAATCTGGGAGGCAGAGGTTGCAGTGAGC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCGGGAAATGCCCACCTTaGTGTTCTCCTATCCCCAAT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFGKCPP*CSPIPN
Trigger: ATTGGGGATAGGAGAACAGCAAGGTGGGCATTTCCC...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATCACTCCTTAATGAGTaGTTGCTGAAGGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGSLLNE*LLKGEN
Trigger: ATTTTCTCCCTTCAGCAAGCACTCATTAAGGAGTGA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGATCTTCACCATTGCCTaGGAATCCGCTGTGAATAGT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVIFTIA*ESAVNS
Trigger: ACTATTCACAGCGGATTCCCAGGCAATGGTGAAGAT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACCTGTTTTGCCCTCCTaGTCACGTTTCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPPVLPS*SRFSPN
Trigger: GTTTGGAGAGAAACGTGACCAGGAGGGCAAAACAGG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAACAAAAGGGGGAAATaGCTTGATGGCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGNKRGK*LDGKFF
Trigger: GAAGAATTTGCCATCAAGCCATTTCCCCCTTTTGTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTAACAAAAGGGGGAAATaGCTTGATGGCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYINKRGK*LDGKFF
Trigger: GAAGAATTTGCCATCAAGCCATTTCCCCCTTTTGTT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATCAACTATTATGTTGTaGTTGCCGAGAGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKSTIML*LPRVQE
Trigger: CTCTTGGACTCTCGGCAACCACAACATAATAGTTGA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGTTGCAATGCCACGACTaGATGCATCTGCACACAATT +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLLQCHD*MHLHTI
Trigger: AATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAA...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATAGACATTCTGTATTGTaGGATGTCAAAAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYRHSVL*DVKSIS
Trigger: GGAAATACTTTTGACATCCCACAATACAGAATGTCT...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAATGCAAAATCAGGTATaGGTTTCGGTTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGMQNQV*VSVESF
Trigger: AAAGCTTTCAACCGAAACTCATACCTGATTTTGCAT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATTGGTAGGCTACCAGTaGTCATATATACAACTTATC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGLVGYQ*SYIQLI
Trigger: GATAAGTTGTATATATGATCACTGGTAGCCTACCAA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTCCACGTTCCTTTTTCTaGAAAGCAACAAAAATCACA +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIPRSFF*KATKIT
Trigger: TGTGATTTTTGTTGCTTTTCAGAAAAAGGAACGTGG...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCATCCTAGTGACTGGTTaGCTTGCAACACGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAILVTG*LATRFP
Trigger: GGGAAAACGTGTTGCAAGTCAACCAGTCACTAGGAT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTCTCAAAAGTGATGGCTaGGTTATATCAGCATATAGT +
Preference number: 4 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYILKSDG*VISAYS
Trigger: ACTATATGCTGATATAACTCAGCCATCACTTTTGAG...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAACAAAACTCAAAAGTaGTGGCTGAGTTATATCAGC +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGNKTQK*WLSYIS
Trigger: GCTGATATAACTCAGCCATCACTTTTGAGTTTTGTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCGGGCCAAGAACTTTTaGATGACTATCTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFRAKNF*MTILNA
Trigger: GGCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGACAATAACAAGGGACTaGAGGTACAAAACACACACG +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLTITRD*RYKTHT
Trigger: CGTGTGTGTTTTGTACCTTCAGTCCCTTGTTATTGT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACCTAAAATGGACCACTaGCTATGTATGTGTACACAT +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIPKMDH*LCMCTH
Trigger: ATGTGTACACATACATAGTCAGTGGTCCATTTTAGG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGACATCTTCAAATAGCTaGTTCAAGGACAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLTSSNS*FKDSMW
Trigger: CCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCATCTGATAAACGAATaGACTGCAAGTGGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSHLINE*TASGFN
Trigger: ATTAAAACCACTTGCAGTGCATTCGTTTATCAGATG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAACGACTGGATGCATCTaGACACAATTCCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETTTGCI*TQFREM
Trigger: CATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAATCAGACAGACTTCTTaGAATGCCACGACTGGATGC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETIRQTS*NATTGC
Trigger: GCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGAT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATATCACTCCTTAATGAGTaGTTGCTGAAGGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAISLLNE*LLKGEN
Trigger: ATTTTCTCCCTTCAGCAAGCACTCATTAAGGAGTGA...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGAGGACAAGATTTTCCTaGATAACCACAACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVRTRFS*ITTTCL
Trigger: GAGACAGGTTGTGGTTATGCAGGAAAATCTTGTCCT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGACAGTAACTTCATTCTaGGGGTATACAGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVTVTSF*GYTETS
Trigger: GCTTGTCTCTGTATACCCGCAGAATGAAGTTACTGT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATGTGGAAATCTCACGTaGATTATCCGTAAGATTAGC +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKCGNLT*IIRKIS
Trigger: GCTAATCTTACGGATAATCCACGTGAGATTTCCACA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATTCAAGGACAGCATGTaGCTGAAGATCGAAGCAACC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETFKDSM*LKIEAT
Trigger: GGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACAAATTCATCACGATTaGAACATACCGACGGAATTC +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIQIHHD*NIPTEF
Trigger: GAATTCCGTCGGTATGTTCCAATCGTGATGAATTTG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACGGTTTAAAAGAACCTaGTCAGCTGAAGCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETRFKRT*SAEAVP
Trigger: TGGGACTGCTTCAGCTGACCAGGTTCTTTTAAACCG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGTCTAAACGAAGAAGCTaGGAACTGACAAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVSKRRS*ELTKQD
Trigger: GTCCTGTTTTGTCAGTTCCCAGCTTCTTCGTTTAGA...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAATTCGAGGTTTCCAATaGTTACTTTTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIIRGFQ*LLLVEE
Trigger: CTCCTCCACTAAAAGTAACCATTGGAAACCTCGAAT...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
3UTR CAA 72 bp AGCTCCCTCTTGCAATGTTTCTCAAATTCATCACGATaGGAACATACCGACGGAATTCATTTTCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSLLQCFSNSSR*EHTDGIHFLSE
Trigger: TTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAACATTGCAAGAGGGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCATGGCGGATAAGGCTTaGACTTCTCGTGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFMADKA*TSREAF
Trigger: AAATGCTTCACGAGAAGTTCAAGCCTTATCCGCCAT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATTGGTAGGCTACCAGTaGTCATATATACAACTTATC +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKLVGYQ*SYIQLI
Trigger: GATAAGTTGTATATATGATCACTGGTAGCCTACCAA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAACTCAAAAGTGATGGCTaGGTTATATCAGCATATAGT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKLKSDG*VISAYS
Trigger: ACTATATGCTGATATAACTCAGCCATCACTTTTGAG...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATCCGATGCTAAGGGCTaGGATGTGATTAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETSDAKG*DVIKGF
Trigger: AAAGCCTTTAATCACATCTCAGCCCTTAGCATCGGA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATATTCTGTCTGAAGCAATaGGTGCTATACATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIFCLKQ*VLYMKV
Trigger: AACTTTCATGTATAGCACTCATTGCTTCAGACAGAA...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGCTTCACTGTTTGCTCTaGAACTTCACTTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLLHCLL*NFTFSE
Trigger: CTCAGAAAAAGTGAAGTTTCAGAGCAAACAGTGAAG...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGATAAGCAGATCAGCATaGCTACCTGGAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLISRSA*LPGIKV
Trigger: CACTTTTATTCCAGGTAGTCATGCTGATCTGCTTAT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATTAATGAGTGCTTGCTaGAGGGAGAAAATTCCATTT +
Preference number: 4 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKLMSAC*REKIPF
Trigger: AAATGGAATTTTCTCCCTTCAGCAAGCACTCATTAA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGCCTAAAATGGACCACTaGCTATGTATGTGTACACAT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVPKMDH*LCMCTH
Trigger: ATGTGTACACATACATAGTCAGTGGTCCATTTTAGG...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACCGAGAGTCCAAGAGTaGCTTAAAGGTATCCTCATT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETPRVQE*LKGILI
Trigger: AATGAGGATACCTTTAAGGCACTCTTGGACTCTCGG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAATTTGGAGTTGTTGTTaGCATTTCAGTAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: HSILKYSASLLNECLLKGIWSCC*HFSRTD
Trigger: ATCAGTTCTACTGAAATGGCAACAACAACTCCAAAT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCACAGAAAAGTCACTGTaGACTATGACGATGGCACAG +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFTEKSL*TMTMAQ
Trigger: CTGTGCCATCGTCATAGTGCACAGTGACTTTTCTGT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGAGGGCAAAAGTCCTTaGTCAAAAGCACAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPEGKSP*SKAQEF
Trigger: AAACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCGAGGGCAAAAGTCCTTaGTCAAAAGCACAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFEGKSP*SKAQEF
Trigger: AAACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTC...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGGACCCAATTACACTTTaGACTGAGCATCTGATAAAC +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVDPITL*TEHLIN
Trigger: GTTTATCAGATGCTCAGTGCAAAGTGTAATTGGGTC...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACACCCTGGGAAGTACTaGTGTCACTGTTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETHPGKY*CHCLSV
Trigger: TACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAGTGTGGATTATTTTATaGCGGATAAGGCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIVWIIL*RIRLEL
Trigger: AAGTTCAAGCCTTATCCGCCATAAAATAATCCACAC...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAGGGAGAGATGTATTTaGAGTTGTTGTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLRERCI*SCCCHF
Trigger: GAAATGGCAACAACAACTCCAAATACATCTCTCCCT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCATTACTGATTTTGCTTaGCTATCCCACCCCTTACCC +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFITDFA*LSHPLP
Trigger: GGGTAAGGGGTGGGATAGCCAAGCAAAATCAGTAAT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCATCTACCAAGCATCTaGACTCTTCGGAACCTAGTA +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFHLPSI*TLRNLV
Trigger: TACTAGGTTCCGAAGAGTCCAGATGCTTGGTAGATG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGATTCGAGGTTTCCAATaGTTACTTTTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLIRGFQ*LLLVEE
Trigger: CTCCTCCACTAAAAGTAACCATTGGAAACCTCGAAT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCTTTATCAGACGCCACTaGCTTCCTAAAATGGACCAC +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFFIRRH*LPKMDH
Trigger: GTGGTCCATTTTAGGAAGCCAGTGGCGTCTGATAAA...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAAGAACACTGCTGATGTaGCTAGAAGGATCCTTAAGT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETRTLLM*LEGSLS
Trigger: ACTTAAGGATCCTTCTAGTCACATCAGCAGTGTTCT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGCCACGTTCCTTTTTCTaGAAAGCAACAAAAATCACA +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVPRSFF*KATKIT
Trigger: TGTGATTTTTGTTGCTTTTCAGAAAAAGGAACGTGG...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAATTACACTTTGCACTaGGCATCTGATAAACGAATG +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLNYTLH*ASDKRM
Trigger: CATTCGTTTATCAGATGCTCAGTGCAAAGTGTAATT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGTTCTGTCTGAAGCAATaGGTGCTATACATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVFCLKQ*VLYMKV
Trigger: AACTTTCATGTATAGCACTCATTGCTTCAGACAGAA...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCACAATAACAAGGGACTaGAGGTACAAAACACACACG +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFTITRD*RYKTHT
Trigger: CGTGTGTGTTTTGTACCTTCAGTCCCTTGTTATTGT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAGTTAGTGGGAAAGCATaGCTACGGTTTAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETVSGKA*LRFKRT
Trigger: GGTTCTTTTAAACCGTAGTCATGCTTTCCCACTAAC...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGGGAATATTGCAAAATaGTTCCCGAGCTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAGNIAK*FPSFIR
Trigger: TCTGATGAAGCTCGGGAAGCATTTTGCAATATTCCC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGTGTGGATTATTTTATaGCGGATAAGGCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLVWIIL*RIRLEL
Trigger: AAGTTCAAGCCTTATCCGCCATAAAATAATCCACAC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGTGCTTTTCTCTTGTGTaGAAATCTCACGTGGATTAT +
Preference number: 4 (lower is better)
Translates to: ILITEKTDISLCVCFSLVCFSLV*KSHVDY
Trigger: ATAATCCACGTGAGATTTCCACACAAGAGAAAAGCA...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAAACCATTTGGTCTCATaGACTTTAGCTGCTGATCAG +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETNHLVS*TLAADQ
Trigger: CTGATCAGCAGCTAAAGTCCATGAGACCAAATGGTT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAATGAACCTGGTTAGCTaGCTTTGGATAAGCAGATCA +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETMNLVS*LWISRS
Trigger: TGATCTGCTTATCCAAAGCCAGCTAACCAGGTTCAT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATCTAAACGAAGAAGCTaGGAACTGACAAAACAGGAC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETSKRRS*ELTKQD
Trigger: GTCCTGTTTTGTCAGTTCCCAGCTTCTTCGTTTAGA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAATAAGCAGATCAGCATaGCTACCTGGAATAAAAGTG +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPISRSA*LPGIKV
Trigger: CACTTTTATTCCAGGTAGTCATGCTGATCTGCTTAT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACTTAAAACCCAAACCTaGCACTGGAATGAAATCCAA +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPLKTQT*HWNEIQ
Trigger: TTGGATTTCATTCCAGTGTCAGGTTTGGGTTTTAAG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACTTAAAACCCAAACCTaGCACTGGAATGAAATCCAA +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETLKTQT*HWNEIQ
Trigger: TTGGATTTCATTCCAGTGTCAGGTTTGGGTTTTAAG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCAAACAAGACAATGCCTaGGTTAGCCCTCTATATAGA +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSAKQDNA*VSPLYR
Trigger: TCTATATAGAGGGCTAACTCAGGCATTGTCTTGTTT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCCTAAAATGGACCACTaGCTATGTATGTGTACACAT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFPKMDH*LCMCTH
Trigger: ATGTGTACACATACATAGTCAGTGGTCCATTTTAGG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAGACCCAATTACACTTTaGACTGAGCATCTGATAAAC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETDPITL*TEHLIN
Trigger: GTTTATCAGATGCTCAGTGCAAAGTGTAATTGGGTC...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAATCTCTAATCTAACATaGTTTGTCCTTGCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETISNLT*FVLARA
Trigger: TGCCCTAGCAAGGACAAAGCATGTTAGATTAGAGAT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCAACAAAAGGGGGAAATaGCTTGATGGCAAATTCTTC +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFNKRGK*LDGKFF
Trigger: GAAGAATTTGCCATCAAGCCATTTCCCCCTTTTGTT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAAGGGAGAGATGTATTTaGAGTTGTTGTTGCCATTTC +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETRERCI*SCCCHF
Trigger: GAAATGGCAACAACAACTCCAAATACATCTCTCCCT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCACTGGCTTCCTAAAATaGACCACTGACTATGTATGT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFTGFLK*TTDYVC
Trigger: ACATACATAGTCAGTGGTCCATTTTAGGAAGCCAGT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCATGCAAAATCAGGTATaGGTTTCGGTTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFMQNQV*VSVESF
Trigger: AAAGCTTTCAACCGAAACTCATACCTGATTTTGCAT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAATGCAAAATCAGGTATaGGTTTCGGTTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPMQNQV*VSVESF
Trigger: AAAGCTTTCAACCGAAACTCATACCTGATTTTGCAT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCAACAAAACTCAAAAGTaGTGGCTGAGTTATATCAGC +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSANKTQK*WLSYIS
Trigger: GCTGATATAACTCAGCCATCACTTTTGAGTTTTGTT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATTCTGTCTGAAGCAATaGGTGCTATACATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETFCLKQ*VLYMKV
Trigger: AACTTTCATGTATAGCACTCATTGCTTCAGACAGAA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR TCA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCTTAATGAGTGCTTGCTaGAGGGAGAAAATTCCATTT +
Preference number: 4 (lower is better)
Translates to: KYHLSITHRSHSILKYSALMSAC*REKIPF
Trigger: AAATGGAATTTTCTCCCTTCAGCAAGCACTCATTAA...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCATTTCACTATGCGTGTaGTTTTCTCTTGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFISLCV*FSLVWK
Trigger: TTTCCACACAAGAGAAAAGCACACGCATAGTGAAAT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAATTTCACTATGCGTGTaGTTTTCTCTTGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPISLCV*FSLVWK
Trigger: TTTCCACACAAGAGAAAAGCACACGCATAGTGAAAT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACATCAAGTGCTAACTTGTaGAGAAATGCATTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETSSANL*RNAFRS
Trigger: ACTCCTAAATGCATTTCTCCACAAGTTAGCACTTGA...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAAAATATCCTAGTGACTaGTTGACTTGCAACACGTTT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETKYPSD*LTCNTF
Trigger: AAACGTGTTGCAAGTCAACCAGTCACTAGGATATTT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR GCA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACATCTGATAAACGAATaGACTGCAAGTGGTTTTAAT +
Preference number: 4 (lower is better)
Translates to: LYFFFPPGAHISEIILETHLINE*TASGFN
Trigger: ATTAAAACCACTTGCAGTGCATTCGTTTATCAGATG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CCA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCAGACATTCTGTATTGTaGGATGTCAAAAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFRHSVL*DVKSIS
Trigger: GGAAATACTTTTGACATCCCACAATACAGAATGTCT...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS CCA 90 bp CTGGGTGGCCTCGTGATGAAGGTCAAAGCTCGAGGACTCCTGAACTaGATCCAGAGGCACCATCCCCCTTGCGAGCATCTCAGGTCCATG +
Preference number: 5 (lower is better)
Translates to: LGGLVMKVKARGLLN*IQRHHPPCEHLRSM
Trigger: CATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCTCGAGCTTTGACCTTCATCACGAGGCCACCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000482979.5
ENST00000620510.1
CDS GCA 90 bp AAAGCTCGAGGACTCCTGAACTGGATCCAGAGGCACCATCCCCCTTaGGAGCATCTCAGGTCCATGAACTTGACCTGGGACCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KARGLLNWIQRHHPP*EHLRSMNLTWDLLS
Trigger: GGACAACAGGTCCCAGGTCAAGTTCATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCTCGAGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000482979.5
ENST00000620510.1
CDS TCA 90 bp GAAGAGCTCGTGACTGTAAGAGGCGGGGTTTCCGAGACGAATGTTTaGAGTGGGACTGGGTGGCCTCGTGATGAAGGTCAAAGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: EELVTVRGGVSETNV*SGTGWPRDEGQSSR
Trigger: CCTCGAGCTTTGACCTTCATCACGAGGCCACCCAGTCCCACTTCAAACATTCGTCTCGGAAACCCCGCCTCTTACAGTCACGAGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAGAGGCACCATCCCCCTaGCGAGCATCTCAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASAEAPSP*RASQVH
Trigger: ATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCTC...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGGGCGGTCCTAGCCTaGGGTAGGACCCTTGTCCTA +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASARAVLA*GRTLVL
Trigger: TAGGACAAGGGTCCTACCCAAGGCTAGGACCGCCCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGGCGCCCGGCCAAGATaGAGCTCCCTCTTGCAATGT +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCGARPR*SSLLQC
Trigger: ACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGCC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS TCA 90 bp TCTTACCTCGTGACTGTAAGAGGCGGGGTTTCCGAGACGAATGTTTaGAGTGGGACTGGGTGGCCTCGTGATGAAGGTCAAAGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: SYLVTVRGGVSETNV*SGTGWPRDEGQSSR
Trigger: CCTCGAGCTTTGACCTTCATCACGAGGCCACCCAGTCCCACTTCAAACATTCGTCTCGGAAACCCCGCCTCTTACAGTCACGAGGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482979.5
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTCTGGGATCTTCCTGTaGTCTCCCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCSGIFL*SPRVML
Trigger: CAGCATCACGCGGGGAGACAACAGGAAGATCCCAGA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCAGGCTTTCACCACGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCQAFTT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACGTGGTGAAAGCCTG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS TCA 90 bp CCTGGGGAAATGCGCTCCCATAATTCTCCTGCCTGTTGTCCCTACTaGGATTCCTCCGAGCCAGATTCTGACATCCCCATTCCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: PGEMRSHNSPACCPY*DSSEPDSDIPIPPE
Trigger: TTCTGGAGGAATGGGGATGTCAGAATCTGGCTCGGAGGAATCTCAGTAGGGACAACAGGCAGGAGAATTATGGGAGCGCATTTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGGAAGCGCCTGAAGCGTaGGCGGAATATCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLEAPEA*AEYLWV
Trigger: GACCCAGAGATATTCCGCCAACGCTTCAGGCGCTTC...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTCTGGGATCTTCCTGTaGTCTCCCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLSGIFL*SPRVML
Trigger: CAGCATCACGCGGGGAGACAACAGGAAGATCCCAGA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCCTTGGGTAGGACCCTaGTCCTACTTGAGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCPWVGP*SYLSGD
Trigger: ATCGCCACTCAAGTAGGACAAGGGTCCTACCCAAGG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACCTTGGGTAGGACCCTaGTCCTACTTGAGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASAPWVGP*SYLSGD
Trigger: ATCGCCACTCAAGTAGGACAAGGGTCCTACCCAAGG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAAGGGCGGTCCTAGCCTaGGGTAGGACCCTTGTCCTA +
Preference number: 5 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRRAVLA*GRTLVL
Trigger: TAGGACAAGGGTCCTACCCAAGGCTAGGACCGCCCT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCGGGAAATGCCCACCTaGCTGTTCTCCTATCCCCAA +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCREMPT*LFSYPQ
Trigger: TTGGGGATAGGAGAACAGCAAGGTGGGCATTTCCCG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGGCAACTGTGGCTGCTaGGACCCTTCCCTGGACCAA +
Preference number: 5 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRGNCGC*DPSLDQ
Trigger: TTGGTCCAGGGAAGGGTCCAAGCAGCCACAGTTGCC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS CCA 90 bp TCTCCTGTTTTGCCCTCCTGGTCACGTTTCTCTCCAAACTCTTTCTaGGATCTTCCTGTTGTCTCCCCGCGTGATGCTGAATCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: SPVLPSWSRFSPNSF*DLPVVSPRDAESSE
Trigger: CTCGGAAGATTCAGCATCACGCGGGGAGACAACAGGAAGATCCCAGAAAGAGTTTGGAGAGAAACGTGACCAGGAGGGCAAAACAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTTCCGAGACGAATGTTaGAAGTGGGACTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLFRDEC*KWDWVA
Trigger: GGCCACCCAGTCCCACTTCAAACATTCGTCTCGGAA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTCTGGGATCTTCCTGTaGTCTCCCCGCGTGATGCTG +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFSGIFL*SPRVML
Trigger: CAGCATCACGCGGGGAGACAACAGGAAGATCCCAGA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATCAGGGGTGGTGAAGTaGGAGCTCAGACTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASASGVVK*ELRLKL
Trigger: AAGCTTCAGTCTGAGCTCCAACTTCACCACCCCTGA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS CCA 90 bp TTACACACAACTTTTCAGGAACGCGCCAAATGCATCAAGGGAGGCTaGGCTGTACTCAGAGGCTCTCTCTCTGGCATGGATTCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LHTTFQERAKCIKGG*AVLRGSLSGMDSVM
Trigger: CATCACAGAATCCATGCCAGAGAGAGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTGAAAAGTTGTGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATGTCTTTCTCCTGTTTaGCCCTCCTGGTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASACLSPV*PSWSRF
Trigger: GAAACGTGACCAGGAGGGCAAAACAGGAGAAAGACA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTGTCTTTCTCCTGTTTaGCCCTCCTGGTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCCLSPV*PSWSRF
Trigger: GAAACGTGACCAGGAGGGCAAAACAGGAGAAAGACA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCCTTCTAGGTAGCCAGTaGCACCCTGCGCACAACGAT +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFLLGSQ*HPAHND
Trigger: ATCGTTGTGCGCAGGGTGCAACTGGCTACCTAGAAG...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGGACCCTTGTCCTACTaGAGTGGCGATGACTACTTA +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCGPLSY*SGDDYL
Trigger: TAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTCC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTACCTTGGGTAGGACCCTaGTCCTACTTGAGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLPWVGP*SYLSGD
Trigger: ATCGCCACTCAAGTAGGACAAGGGTCCTACCCAAGG...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCCGCACCTGGCCTCAGTaGCTTTCTAGAGGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFRTWPQ*LSRGQK
Trigger: CTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGCG...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCGGGATTTTACCATGTaGGCCAGGCTGGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCRDFTM*ARLVSK
Trigger: TTTTGAGACCAGCCTGGCCAACATGGTAAAATCCCG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCGCTCCAGGAACTGACTaGATCCAAACAGGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFAPGTD*IQTGSV
Trigger: CACAGACCCTGTTTGGATCAAGTCAGTTCCTGGAGC...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324306.11
CDS-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCTCAGGTCCATGAACTaGACCTGGGACCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYLRSMN*TWDLLS
Trigger: GGACAACAGGTCCCAGGTCAAGTTCATGGACCTGAG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATTTCCGAGACGAATGTTaGAAGTGGGACTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYFRDEC*KWDWVA
Trigger: GGCCACCCAGTCCCACTTCAAACATTCGTCTCGGAA...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATCAGGGGTGGTGAAGTaGGAGCTCAGACTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLSGVVK*ELRLKL
Trigger: AAGCTTCAGTCTGAGCTCCAACTTCACCACCCCTGA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCACTATTATGTTGTGGTaGCCGAGAGTCCAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCTIMLW*PRVQEC
Trigger: GCACTCTTGGACTCTCGGCAACCACAACATAATAGT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAGAGGGCAAAAGTCCTaGCTCAAAAGCACAGGAGTT +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASARGQKS*LKSTGV
Trigger: AACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTCT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATCGCACCTGGCCTCAGTaGCTTTCTAGAGGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYRTWPQ*LSRGQK
Trigger: CTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGCG...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCGCACGTTTAAAGGAGTaGTTCCATTTCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCARLKE*FHFSAP
Trigger: TGGGGCACTGAAATGGAACAACTCCTTTAAACGTGC...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCCGTATCTCTGAGAAGTaGCTCAGAGTAGGACACAGA +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCRISEK*LRVGHR
Trigger: TCTGTGTCCTACTCTGAGCAACTTCTCAGAGATACG...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTTTCAGCCTTTGAGGTaGACTCCTCGTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLFQPLR*TPRSHS
Trigger: GGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCCATCAGACAGACTTCTaGCAATGCCACGACTGGATG +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFHQTDF*QCHDWM
Trigger: CATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATG...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACTCCTTAATGAGTGCTaGCTGAAGGGAGAAAATTCC +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASALLNEC*LKGENS
Trigger: GGAATTTTCTCCCTTCAGCAAGCACTCATTAAGGAG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGAGGCACCATCCCCCTaGCGAGCATCTCAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLEAPSP*RASQVH
Trigger: ATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCTC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTTTCAGCCTTTGAGGTaGACTCCTCGTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFFQPLR*TPRSHS
Trigger: GGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCAAAGGGGGAAATGGCTaGATGGCAAATTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCKGGNG*MANSSF
Trigger: AAAGGAAGAATTTGCCATCAAGCCATTTCCCCCTTT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCACTTTCAACTATTATGTaGTGGTTGCCGAGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASALSTIM*WLPRVQ
Trigger: TTGGACTCTCGGCAACCACAACATAATAGTTGAAAG...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACTTCTAGGTAGCCAGTaGCACCCTGCGCACAACGAT +
Preference number: 5 (lower is better)
Translates to: HSILKYSASLLNECLLKGLLGSQ*HPAHND
Trigger: ATCGTTGTGCGCAGGGTGCAACTGGCTACCTAGAAG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAGGGCGGTCCTAGCCTaGGGTAGGACCCTTGTCCTA +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLRAVLA*GRTLVL
Trigger: TAGGACAAGGGTCCTACCCAAGGCTAGGACCGCCCT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTAGCGGGCCAAGAACTTTaGAATGACTATCTTGAACGC +
Preference number: 5 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLAGQEL*NDYLER
Trigger: GCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCGC...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAACAGGCTTTCACCACGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKQAFTT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACGTGGTGAAAGCCTG...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGGGCAACTGTGGCTGCTaGGACCCTTCCCTGGACCAA +
Preference number: 5 (lower is better)
Translates to: ILITEKTDISLCVCFSLVGNCGC*DPSLDQ
Trigger: TTGGTCCAGGGAAGGGTCCAAGCAGCCACAGTTGCC...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGGGCAACTGTGGCTGCTaGGACCCTTCCCTGGACCAA +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLGNCGC*DPSLDQ
Trigger: TTGGTCCAGGGAAGGGTCCAAGCAGCCACAGTTGCC...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACCGAGGTTTCAGCCTTaGAGGTTGACTCCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: HSILKYSASLLNECLLKGPRFQP*RLTPRS
Trigger: AGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAGAAATAAGCAGGATGTaGGCCAAAGTAGGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: HYVQHCAGRDRNISLDNREISRM*AKVGLV
Trigger: AACAAGCCCTACTTTGGCCAACATCCTGCTTATTTC...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCAACCATCTACATTTGTaGCAGTCCTTTGGAACTGTA +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCNHLHL*QSFGTV
Trigger: TACAGTTCCAAAGGACTGCAACAAATGTAGATGGTT...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCAAACCATCTACATTTGTaGCAGTCCTTTGGAACTGTA +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASANHLHL*QSFGTV
Trigger: TACAGTTCCAAAGGACTGCAACAAATGTAGATGGTT...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGGTCACACTGATAGTCTaGAGGTTTGTTCTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLVTLIV*RFVLSL
Trigger: TAGACTGAGAACAAACCTCAAGACTATCAGTGTGAC...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTATATCCTAGTGACTGGTaGACTTGCAACACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLYPSDW*TCNTFS
Trigger: GGAAAACGTGTTGCAAGTCAACCAGTCACTAGGATA...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCGAGCTTCATCAGACAGACTTCTTGCAATGCCACGACTGGATGCATCTGCATCAAATTCATCACGATaGGAACATACCGACGGAATT +
Preference number: 5 (lower is better)
Translates to: SRASSDRLLAMPRLDASASNSSR*EHTDGI
Trigger: AATTCCGTCGGTATGTTCCAATCGTGATGAATTTGA...TGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAAGTCACTGTGCACTATGACGATGGCACAGCCAGCCACATCTCAGTACACTGCTCAAATTCATCACGATaGGAACATACCGACGGAATT +
Preference number: 5 (lower is better)
Translates to: KVTVHYDDGTASHISVHCSNSSR*EHTDGI
Trigger: AATTCCGTCGGTATGTTCCAATCGTGATGAATTTGA...GCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATGCACGTTTAAAGGAGTaGTTCCATTTCAGTGCCCCA +
Preference number: 5 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYARLKE*FHFSAP
Trigger: TGGGGCACTGAAATGGAACAACTCCTTTAAACGTGC...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGCAGGCTTTCACCACGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ILITEKTDISLCVCFSLVQAFTT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACGTGGTGAAAGCCTG...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTTGTCTTTCTCCTGTTTaGCCCTCCTGGTCACGTTTC +
Preference number: 5 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYICLSPV*PSWSRF
Trigger: GAAACGTGACCAGGAGGGCAAAACAGGAGAAAGACA...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATATCAGGGGTGGTGAAGTaGGAGCTCAGACTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAISGVVK*ELRLKL
Trigger: AAGCTTCAGTCTGAGCTCCAACTTCACCACCCCTGA...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCACATCTGTGAGACTTaGTTCCCGTGGGAACTTCTT +
Preference number: 5 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSHICET*FPWELL
Trigger: AAGAAGTTCCCACGGGAACAAAGTCTCACAGATGTG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCACTATTATGTTGTGGTaGCCGAGAGTCCAAGAGTGC +
Preference number: 5 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSTIMLW*PRVQEC
Trigger: GCACTCTTGGACTCTCGGCAACCACAACATAATAGT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGACTTTCAACTATTATGTaGTGGTTGCCGAGAGTCCAA +
Preference number: 5 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRLSTIM*WLPRVQ
Trigger: TTGGACTCTCGGCAACCACAACATAATAGTTGAAAG...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTGGACCCTTGTCCTACTaGAGTGGCGATGACTACTTA +
Preference number: 5 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIGPLSY*SGDDYL
Trigger: TAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTCC...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGCGCACCTGGCCTCAGTaGCTTTCTAGAGGGCAAAAG +
Preference number: 5 (lower is better)
Translates to: ILITEKTDISLCVCFSLVRTWPQ*LSRGQK
Trigger: CTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGCG...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGACGGGATTTTACCATGTaGGCCAGGCTGGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: HSILKYSASLLNECLLKGRDFTM*ARLVSK
Trigger: TTTTGAGACCAGCCTGGCCAACATGGTAAAATCCCG...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCGGCGCCCGGCCAAGATaGAGCTCCCTCTTGCAATGT +
Preference number: 5 (lower is better)
Translates to: KYHLSITHRSHSILKYSAGARPR*SSLLQC
Trigger: ACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGCC...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAGGCGCCCGGCCAAGATaGAGCTCCCTCTTGCAATGT +
Preference number: 5 (lower is better)
Translates to: LYFFFPPGAHISEIILETGARPR*SSLLQC
Trigger: ACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGCC...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCCGTATCTCTGAGAAGTaGCTCAGAGTAGGACACAGA +
Preference number: 5 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSRISEK*LRVGHR
Trigger: TCTGTGTCCTACTCTGAGCAACTTCTCAGAGATACG...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGATACTGCACTTAACCTaGCTGGAAGACTTAATGATG +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLILHLT*LEDLMM
Trigger: CATCATTAAGTCTTCCAGCAAGGTTAAGTGCAGTAT...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGAAGCGCCTGAAGCGTaGGCGGAATATCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPEAPEA*AEYLWV
Trigger: GACCCAGAGATATTCCGCCAACGCTTCAGGCGCTTC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp AGATTAGCCTTTCCCTGCAGGGGCTGTGTGGAAGGATTATATGCCCAACTACTACACTGTCCCTCTTTTTaGAGAAATAAGCAGGATGTT +
Preference number: 5 (lower is better)
Translates to: RLAFPCRGCVEGLYAQLLHCPSF*RNKQDV
Trigger: AACATCCTGCTTATTTCTCAAAAAAGAGGGACAGTG...TAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATGTCCCAATGTCGTTTTaGTTTTCACTGTCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYVPMSF*FSLSLF
Trigger: AAAGAGGGACAGTGAAAACAAAAACGACATTGGGAC...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTATGTCCAGCACTGTGCTGGCAGGGATAGAAATATATCCCTTGACAACCGAAAGGGAGAGATGTATTaGGAGTTGTTGTTGCCATTT +
Preference number: 5 (lower is better)
Translates to: HYVQHCAGRDRNISLDNRKGEMY*ELLLPF
Trigger: AAATGGCAACAACAACTCCAAATACATCTCTCCCTT...TCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGGCCTTTCGTTTATATTaGGAACAAAAACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLAFRLY*EQKQHQ
Trigger: CTGATGCTGTTTTTGTTCCAAATATAAACGAAAGGC...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAGAGGGCAAAAGTCCTaGCTCAAAAGCACAGGAGTT +
Preference number: 5 (lower is better)
Translates to: HSILKYSASLLNECLLKGRGQKS*LKSTGV
Trigger: AACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTCT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTAGAGGGCAAAAGTCCTaGCTCAAAAGCACAGGAGTT +
Preference number: 5 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIRGQKS*LKSTGV
Trigger: AACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTCT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTGGAAATCTCACGTGGATTATCCGTAAGATTAGCCTTTCCCTGCAGGGGCTGTCAGAGGTCAACTTCTaGGTTTTGAGGAAAAATTCA +
Preference number: 5 (lower is better)
Translates to: CGNLTWIIRKISLSLQGLSEVNF*VLRKNS
Trigger: TGAATTTTTCCTCAAAACCAAGAAGTTGACCTCTGA...CAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCTCAGGTCCATGAACTaGACCTGGGACCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFLRSMN*TWDLLS
Trigger: GGACAACAGGTCCCAGGTCAAGTTCATGGACCTGAG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324306.11
ENST00000620510.1
CDS-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACACATCTGTGAGACTTaGTTCCCGTGGGAACTTCTT +
Preference number: 5 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIHICET*FPWELL
Trigger: AAGAAGTTCCCACGGGAACAAAGTCTCACAGATGTG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCGTCCCAATGTCGTTTTaGTTTTCACTGTCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSVPMSF*FSLSLF
Trigger: AAAGAGGGACAGTGAAAACAAAAACGACATTGGGAC...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAGCGGGCCAAGAACTTTaGAATGACTATCTTGAACGC +
Preference number: 5 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKAGQEL*NDYLER
Trigger: GCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCGC...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AGGCCAAAGAATGACCACTGTGCAGTTTTAGCTCCCACTTCGTTGGTTCCATATTCAAATTCATCACGATaGGAACATACCGACGGAATT +
Preference number: 5 (lower is better)
Translates to: RPKNDHCAVLAPTSLVPYSNSSR*EHTDGI
Trigger: AATTCCGTCGGTATGTTCCAATCGTGATGAATTTGA...ATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCTCAGAGGTCAACTTCTaGGTTTTGAGGAAAAATTCA +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFSEVNF*VLRKNS
Trigger: TGAATTTTTCCTCAAAACCAAGAAGTTGACCTCTGA...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCGGGAAATGCCCACCTaGCTGTTCTCCTATCCCCAA +
Preference number: 5 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFREMPT*LFSYPQ
Trigger: TTGGGGATAGGAGAACAGCAAGGTGGGCATTTCCCG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAACGTATCTCTGAGAAGTaGCTCAGAGTAGGACACAGA +
Preference number: 5 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKRISEK*LRVGHR
Trigger: TCTGTGTCCTACTCTGAGCAACTTCTCAGAGATACG...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TCCCCGCTGCTCCGTTCTGTGAACCGACTTTTTGTCTACAATCACACTGATTTCACAAAACAGGACAGGTaGTTTTTAATCCAGTCTACA +
Preference number: 5 (lower is better)
Translates to: SPLLRSVNRLFVYNHTDFTKQDR*FLIQST
Trigger: TGTAGACTGGATTAAAAACAACCTGTCCTGTTTTGT...GAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGTTTCAGCCTTTGAGGTaGACTCCTCGTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLFQPLR*TPRSHS
Trigger: GGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAA...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCCGAGGTTTCAGCCTTaGAGGTTGACTCCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFPRFQP*RLTPRS
Trigger: AGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACCGAGGTTTCAGCCTTaGAGGTTGACTCCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPPRFQP*RLTPRS
Trigger: AGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAGAAATAAGCAGGATGTaGGCCAAAGTAGGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIEISRM*AKVGLV
Trigger: AACAAGCCCTACTTTGGCCAACATCCTGCTTATTTC...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAACCATCTACATTTGTaGCAGTCCTTTGGAACTGTA +
Preference number: 5 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSNHLHL*QSFGTV
Trigger: TACAGTTCCAAAGGACTGCAACAAATGTAGATGGTT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TGTTGCCATTTCAGTAGAACTGATCTCAGGGATGAGGACAGAACCATCTACATTATGTTGCAAGCGTTTTaGACCATGACCCAATTACAC +
Preference number: 5 (lower is better)
Translates to: CCHFSRTDLRDEDRTIYIMLQAF*TMTQLH
Trigger: GTGTAATTGGGTCATGGTCAAAAACGCTTGCAACAT...AATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATACTCCTTAATGAGTGCTaGCTGAAGGGAGAAAATTCC +
Preference number: 5 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAILLNEC*LKGENS
Trigger: GGAATTTTCTCCCTTCAGCAAGCACTCATTAAGGAG...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAAAGGGAGAGATGTATTaGGAGTTGTTGTTGCCATTT +
Preference number: 5 (lower is better)
Translates to: HSILKYSASLLNECLLKGKGEMY*ELLLPF
Trigger: AAATGGCAACAACAACTCCAAATACATCTCTCCCTT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACCCTGGGAAGTACTGCTGTCACTGTTTAAGTGTATTTCAGTTCTGTTACTCCAGAATTCTAAGAGCTTaGCCACAGAAAGATGTCAAA +
Preference number: 5 (lower is better)
Translates to: HPGKYCCHCLSVFQFCYSRILRA*PQKDVK
Trigger: TTTGACATCTTTCTGTGGCAAAGCTCTTAGAATTCT...GGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGGACCCTTGTCCTACTaGAGTGGCGATGACTACTTA +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPGPLSY*SGDDYL
Trigger: TAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTCC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAAGTCACACTGATAGTCTaGAGGTTTGTTCTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKVTLIV*RFVLSL
Trigger: TAGACTGAGAACAAACCTCAAGACTATCAGTGTGAC...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCGGGATTTTACCATGTaGGCCAGGCTGGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFRDFTM*ARLVSK
Trigger: TTTTGAGACCAGCCTGGCCAACATGGTAAAATCCCG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACATCAGACAGACTTCTaGCAATGCCACGACTGGATG +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPHQTDF*QCHDWM
Trigger: CATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCCATCAGACAGACTTCTaGCAATGCCACGACTGGATG +
Preference number: 5 (lower is better)
Translates to: KYHLSITHRSHSILKYSAHQTDF*QCHDWM
Trigger: CATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATG...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGCACAGCAACGAGTCTTaGCAAAACCTCTCTCCTAAT +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLHSNES*QNLSPN
Trigger: ATTAGGAGAGAGGTTTTGCAAAGACTCGTTGCTGTG...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGAATACTGCACTTAACCTaGCTGGAAGACTTAATGATG +
Preference number: 5 (lower is better)
Translates to: HSILKYSASLLNECLLKGILHLT*LEDLMM
Trigger: CATCATTAAGTCTTCCAGCAAGGTTAAGTGCAGTAT...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCACACATCTGTGAGACTTaGTTCCCGTGGGAACTTCTT +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPHICET*FPWELL
Trigger: AAGAAGTTCCCACGGGAACAAAGTCTCACAGATGTG...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CACTCTATCTTAAAATACTCAGCCTCACTCCTTAATGAGTGCTTGCTGAAGGGATTCGTGGAGCCAATCTaGATCTTTCAACTATTATGT +
Preference number: 5 (lower is better)
Translates to: HSILKYSASLLNECLLKGFVEPI*IFQLLC
Trigger: ACATAATAGTTGAAAGATCAAGATTGGCTCCACGAA...TCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATTAGCTCCCACTTCGTaGGTTCCATATAAAACCATT +
Preference number: 5 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKLAPTS*VPYKTI
Trigger: AATGGTTTTATATGGAACCAACGAAGTGGGAGCTAA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ATCCTCATTACTGAAAAGACTGACATTTCACTATGCGTGTGCTTTTCTCTTGTGATGTTGCAAGCGTTTTaGACCATGACCCAATTACAC +
Preference number: 5 (lower is better)
Translates to: ILITEKTDISLCVCFSLVMLQAF*TMTQLH
Trigger: GTGTAATTGGGTCATGGTCAAAAACGCTTGCAACAT...CACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAGAAATAAGCAGGATGTaGGCCAAAGTAGGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPEISRM*AKVGLV
Trigger: AACAAGCCCTACTTTGGCCAACATCCTGCTTATTTC...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAAGCAATGAGTGCTATAGCCTTTCGTTTATATTaGGAACAAAAACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: RLEHTDGIHFLSEAMSAIAFRLY*EQKQHQ
Trigger: CTGATGCTGTTTTTGTTCCAAATATAAACGAAAGGC...TATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCTATCCTAGTGACTGGTaGACTTGCAACACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFYPSDW*TCNTFS
Trigger: GGAAAACGTGTTGCAAGTCAACCAGTCACTAGGATA...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GAAAGTCTATGCAGGCGGCTGACTAGTGCCTTTCGTTTATATTTGGAACAAAAATCAGAGGTCAACTTCTaGGTTTTGAGGAAAAATTCA +
Preference number: 5 (lower is better)
Translates to: ESLCRRLTSAFRLYLEQKSEVNF*VLRKNS
Trigger: TGAATTTTTCCTCAAAACCAAGAAGTTGACCTCTGA...TTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCACAGCAACGAGTCTTaGCAAAACCTCTCTCCTAAT +
Preference number: 5 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFHSNES*QNLSPN
Trigger: ATTAGGAGAGAGGTTTTGCAAAGACTCGTTGCTGTG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACTCCTTAATGAGTGCTaGCTGAAGGGAGAAAATTCC +
Preference number: 5 (lower is better)
Translates to: LYFFFPPGAHISEIILETLLNEC*LKGENS
Trigger: GGAATTTTCTCCCTTCAGCAAGCACTCATTAAGGAG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGATACTGCACTTAACCTaGCTGGAAGACTTAATGATG +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLILHLT*LEDLMM
Trigger: CATCATTAAGTCTTCCAGCAAGGTTAAGTGCAGTAT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCAAAGGGGGAAATGGCTaGATGGCAAATTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: KYHLSITHRSHSILKYSAKGGNG*MANSSF
Trigger: AAAGGAAGAATTTGCCATCAAGCCATTTCCCCCTTT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCAAAAGGGGGAAATGGCTaGATGGCAAATTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPKGGNG*MANSSF
Trigger: AAAGGAAGAATTTGCCATCAAGCCATTTCCCCCTTT...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGTTCGTGGAGCCAATCTaGATCTTTCAACTATTATGT +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLFVEPI*IFQLLC
Trigger: ACATAATAGTTGAAAGATCAAGATTGGCTCCACGAA...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGAGAATTCTAAGAGCTTaGCCACAGAAAGATGTCAAA +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLRILRA*PQKDVK
Trigger: TTTGACATCTTTCTGTGGCAAAGCTCTTAGAATTCT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp GTTTCTCAAATTCATCACGATTGGAACATACCGACGGAATTCATTTTCTGTCTGACAAAACAGGACAGGTaGTTTTTAATCCAGTCTACA +
Preference number: 5 (lower is better)
Translates to: VSQIHHDWNIPTEFIFCLTKQDR*FLIQST
Trigger: TGTAGACTGGATTAAAAACAACCTGTCCTGTTTTGT...CAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp ACAACTAGCATGCTAATGGTTAACTGTAGAATGTTTCAACTGTTAACAGACTTCCACTGTCCCTCTTTTTaGAGAAATAAGCAGGATGTT +
Preference number: 5 (lower is better)
Translates to: TTSMLMVNCRMFQLLTDFHCPSF*RNKQDV
Trigger: AACATCCTGCTTATTTCTCAAAAAAGAGGGACAGTG...GAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACACACTGTCCCTCTTTTTaGAGAAATAAGCAGGATGTT +
Preference number: 5 (lower is better)
Translates to: LYFFFPPGAHISEIILETHCPSF*RNKQDV
Trigger: AACATCCTGCTTATTTCTCAAAAAAGAGGGACAGTG...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp TTCTCTGATTCTATATTTCATTTAACAATCTGCAGACTTTCACCCCATTTCCCATTAGCTCCCACTTCGTaGGTTCCATATAAAACCATT +
Preference number: 5 (lower is better)
Translates to: FSDSIFHLTICRLSPHFPLAPTS*VPYKTI
Trigger: AATGGTTTTATATGGAACCAACGAAGTGGGAGCTAA...TGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAGCCTTTCGTTTATATTaGGAACAAAAACAGCATCAG +
Preference number: 5 (lower is better)
Translates to: LYFFFPPGAHISEIILETAFRLY*EQKQHQ
Trigger: CTGATGCTGTTTTTGTTCCAAATATAAACGAAAGGC...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp AAATATCACCTTTCAATCACTCACAGATCTCACTCTATCTTAAAATACTCAGCCAGAATTCTAAGAGCTTaGCCACAGAAAGATGTCAAA +
Preference number: 5 (lower is better)
Translates to: KYHLSITHRSHSILKYSARILRA*PQKDVK
Trigger: TTTGACATCTTTCTGTGGCAAAGCTCTTAGAATTCT...GGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS-3UTR CAA 90 bp CTGTATTTCTTTTTCCCTCCAGGAGCACACATCTCTGAAATAATTTTAGAAACAACAAAACAGGACAGGTaGTTTTTAATCCAGTCTACA +
Preference number: 5 (lower is better)
Translates to: LYFFFPPGAHISEIILETTKQDR*FLIQST
Trigger: TGTAGACTGGATTAAAAACAACCTGTCCTGTTTTGT...TGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000324306.11
ENST00000535170.5
ENST00000620510.1
CDS GCA 72 bp GGACTCCTGAACTGGATCCAGAGGCACCATCCCCCTTaGGAGCATCTCAGGTCCATGAACTTGACCTGGGAC +
Preference number: 6 (lower is better)
Translates to: GLLNWIQRHHPP*EHLRSMNLTWD
Trigger: GTCCCAGGTCAAGTTCATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCTCTGGATCCAGTTCAGGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000482979.5
ENST00000620510.1
CDS CAA 90 bp CAAAGCTCGAGGACTCCTGAACTGGATCCAGAGGCACCATCCCCCTaGCGAGCATCTCAGGTCCATGAACTTGACCTGGGACCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: QSSRTPELDPEAPSP*RASQVHELDLGPVV
Trigger: GACAACAGGTCCCAGGTCAAGTTCATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCTCGAGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000482979.5
ENST00000620510.1
CDS CAA 72 bp AGGACTCCTGAACTGGATCCAGAGGCACCATCCCCCTaGCGAGCATCTCAGGTCCATGAACTTGACCTGGGA +
Preference number: 6 (lower is better)
Translates to: RTPELDPEAPSP*RASQVHELDLG
Trigger: TCCCAGGTCAAGTTCATGGACCTGAGATGCTCGCAAGGGGGATGGTGCCTCTGGATCCAGTTCAGGAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000482979.5
ENST00000620510.1
CDS TCA 72 bp TGTCCTCGATCTTCACCATTGCCTGGGAATCCGCTGTaGATAGTGCAGATGCCATCGCCTGGTCTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: CPRSSPLPGNPL*IVQMPSPGLWD
Trigger: GTCCCAGAGACCAGGCGATGGCATCTGCACTATTCACAGCGGATTCCCAGGCAATGGTGAAGATCGAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CCA 72 bp ATATCTCTGGGTCTGGAGGAGGCGTGTCCTGTAGGGTaGAATCCTGCCCCCACATGTGGTCTTCCTCATCTT +
Preference number: 6 (lower is better)
Translates to: ISLGLEEACPVG*NPAPTCGLPHL
Trigger: AAGATGAGGAAGACCACATGTGGGGGCAGGATTCCACCCTACAGGACACGCCTCCTCCAGACCCAGAGATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000432317.1
ENST00000482979.5
ENST00000620510.1
CDS TCA 72 bp GTGACTGTAAGAGGCGGGGTTTCCGAGACGAATGTTTaGAGTGGGACTGGGTGGCCTCGTGATGAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: VTVRGGVSETNV*SGTGWPRDEGQ
Trigger: TTGACCTTCATCACGAGGCCACCCAGTCCCACTTCAAACATTCGTCTCGGAAACCCCGCCTCTTACAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000482979.5
ENST00000620510.1
CDS CCA 72 bp ACTTTTCAGGAACGCGCCAAATGCATCAAGGGAGGCTaGGCTGTACTCAGAGGCTCTCTCTCTGGCATGGAT +
Preference number: 6 (lower is better)
Translates to: TFQERAKCIKGG*AVLRGSLSGMD
Trigger: ATCCATGCCAGAGAGAGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTGAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CAA 90 bp CTGTTGTCTCCCCGCGTGATGCTGAATCTTCCGAGGTTTCAGCCTTaGAGGTTGACTCCTCGTTCTCATTCCTGTTTTCACCACCCTGGG +
Preference number: 6 (lower is better)
Translates to: LLSPRVMLNLPRFQP*RLTPRSHSCFHHPG
Trigger: CCCAGGGTGGTGAAAACAGGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGGAAGATTCAGCATCACGCGGGGAGACAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CCA 72 bp TTGCCCTCCTGGTCACGTTTCTCTCCAAACTCTTTCTaGGATCTTCCTGTTGTCTCCCCGCGTGATGCTGAA +
Preference number: 6 (lower is better)
Translates to: LPSWSRFSPNSF*DLPVVSPRDAE
Trigger: TTCAGCATCACGCGGGGAGACAACAGGAAGATCCCAGAAAGAGTTTGGAGAGAAACGTGACCAGGAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CAA 90 bp CCTCCTGGTCACGTTTCTCTCCAAACTCTTTCTGGGATCTTCCTGTaGTCTCCCCGCGTGATGCTGAATCTTCCGAGGTTTCAGCCTTTG +
Preference number: 6 (lower is better)
Translates to: PPGHVSLQTLSGIFL*SPRVMLNLPRFQPL
Trigger: CAAAGGCTGAAACCTCGGAAGATTCAGCATCACGCGGGGAGACAACAGGAAGATCCCAGAAAGAGTTTGGAGAGAAACGTGACCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS TCA 72 bp ATGCGCTCCCATAATTCTCCTGCCTGTTGTCCCTACTaGGATTCCTCCGAGCCAGATTCTGACATCCCCATT +
Preference number: 6 (lower is better)
Translates to: MRSHNSPACCPY*DSSEPDSDIPI
Trigger: AATGGGGATGTCAGAATCTGGCTCGGAGGAATCTCAGTAGGGACAACAGGCAGGAGAATTATGGGAGCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS GCA 72 bp CTTCCTTTACACACAACTTTTCAGGAACGCGCCAAATaGATCAAGGGAGGCTGGGCTGTACTCAGAGGCTCT +
Preference number: 6 (lower is better)
Translates to: LPLHTTFQERAK*IKGGWAVLRGS
Trigger: AGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTGAAAAGTTGTGTGTAAAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CAA 72 bp CCCCGCGTGATGCTGAATCTTCCGAGGTTTCAGCCTTaGAGGTTGACTCCTCGTTCTCATTCCTGTTTTCAC +
Preference number: 6 (lower is better)
Translates to: PRVMLNLPRFQP*RLTPRSHSCFH
Trigger: GTGAAAACAGGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGGAAGATTCAGCATCACGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CAA 72 bp CACGTTTCTCTCCAAACTCTTTCTGGGATCTTCCTGTaGTCTCCCCGCGTGATGCTGAATCTTCCGAGGTTT +
Preference number: 6 (lower is better)
Translates to: HVSLQTLSGIFL*SPRVMLNLPRF
Trigger: AAACCTCGGAAGATTCAGCATCACGCGGGGAGACAACAGGAAGATCCCAGAAAGAGTTTGGAGAGAAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CAA 72 bp TTTGTTCCCGTGGGAACTTCTTCAGGGGTGGTGAAGTaGGAGCTCAGACTGAAGCTTCTTCCCAATCCTTTC +
Preference number: 6 (lower is better)
Translates to: FVPVGTSSGVVK*ELRLKLLPNPF
Trigger: GAAAGGATTGGGAAGAAGCTTCAGTCTGAGCTCCAACTTCACCACCCCTGAAGAAGTTCCCACGGGAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CAA 72 bp GTGATGCTGAATCTTCCGAGGTTTCAGCCTTTGAGGTaGACTCCTCGTTCTCATTCCTGTTTTCACCACCCT +
Preference number: 6 (lower is better)
Translates to: VMLNLPRFQPLR*TPRSHSCFHHP
Trigger: AGGGTGGTGAAAACAGGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGGAAGATTCAGCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324306.11
ENST00000426572.5
ENST00000535170.5
ENST00000620510.1
CDS CAA 72 bp CATGGTTTCCTATGTAAAACAGCGATTTCTCCACATTaGTTCAGCATATATACTAACAGTGCTTTGCTGATG +
Preference number: 6 (lower is better)
Translates to: HGFLCKTAISPH*FSIYTNSALLM
Trigger: CATCAGCAAAGCACTGTTAGTATATATGCTGAACAAATGTGGAGAAATCGCTGTTTTACATAGGAAACCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432317.1