RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZIM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000269699

Ensembl transcript IDs: ENST00000593711.6, ENST00000593931.1, ENST00000595671.5, ENST00000597281.5, ENST00000599935.5, ENST00000601070.5, ENST00000629319.2, ENST00000650111.1

Found 516 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCCCTTaGACCTGTGCACAGCACATGCTCTATATCTCCTACTGGGAAAGA +
Preference number: 1 (lower is better)
Translates to: SKWSSRNFEALALSP*TCAQHMLYISYWER
Trigger: TCTTTCCCAGTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR GCA 90 bp TCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTAC +
Preference number: 1 (lower is better)
Translates to: SLGMLTGDSYIFQEQ*LPGDPFLEDPLIVY
Trigger: GTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 90 bp GAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTaGCACTTTCCCCTTGAACCTGTGCACAGCACATGCTCTATATCT +
Preference number: 1 (lower is better)
Translates to: EAEYTPNGAAETSRP*HFPLEPVHSTCSIS
Trigger: AGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR TCA 90 bp TCGTTTGCAAAATTCACATCTGTTGTGTTTGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATATTCCAGGAGCAGTGCCTTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: SFAKFTSVVFVLLGC*LGTRTYSRSSAFLG
Trigger: CCCCAGGAAGGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTGAATTTTGCAAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR GCA 90 bp GTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTGT +
Preference number: 1 (lower is better)
Translates to: VHRDSHTGRKAFYLH*SQKSSYQNGSSDVC
Trigger: ACAGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 90 bp TTGCAAAATTCACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTaGGGACTCGTACATATTCCAGGAGCAGTGCCTTCCTGGGGATCC +
Preference number: 1 (lower is better)
Translates to: LQNSHLLCLFSWDAD*GLVHIPGAVPSWGS
Trigger: GGATCCCCAGGAAGGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTGAATTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 90 bp CTAAAGGTTCGTTTGCAAAATTCACATCTGTTGTGTTTGTTCTCTTaGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCCT +
Preference number: 1 (lower is better)
Translates to: LKVRLQNSHLLCLFS*DADWGLVHIPGAVP
Trigger: AGGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTGAATTTTGCAAACGAACCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 90 bp GGTACCGAGTGGAACTTCAAAAATACGAGCCTTGGACTAAACTTTTaGGGAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAG +
Preference number: 1 (lower is better)
Translates to: GTEWNFKNTSLGLNF*GSGIYSKWSSRNFE
Trigger: CTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAAGTTTAGTCCAAGGCTCGTATTTTTGAAGTTCCACTCGGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR-3UTR CCA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCTCAGGTTTAGAGAACTaGTGCCCCAGGGAGACCAGG +
Preference number: 2 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCSGLEN*CPRETR
Trigger: CCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGA...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CAA 90 bp CTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCCCTaGAACCTGTGCACAGCACATGCTCTATATCTCCTACTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: LQMEQQKLRGPGTFP*NLCTAHALYLLLGK
Trigger: CTTTCCCAGTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTCAGGTTTAGAGAACTaGTGCCCCAGGGAGACCAGG +
Preference number: 2 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTSGLEN*CPRETR
Trigger: CCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGA...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCGGAGCAGTGCCTTCCTaGGGATCCTTTCCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTGAVPS*GSFPRG
Trigger: TCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCC...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 2 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTCAGGTTTAGAGAACTaGTGCCCCAGGGAGACCAGG +
Preference number: 2 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYSGLEN*CPRETR
Trigger: CCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCGGAGCAGTGCCTTCCTaGGGATCCTTTCCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFGAVPS*GSFPRG
Trigger: TCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCC...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR TCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCAGCTTCTTTCCGGAGTaGGGGTCTTGGGGTCATTCA +
Preference number: 2 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFSFFPE*GSWGHS
Trigger: TGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCT...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR TCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATAT +
Preference number: 2 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTVLLGC*LGTRTY
Trigger: ATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAAC...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 2 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTTTCTCTTGGTTGCCCTaGTGTGGTTCCAATGGATCA +
Preference number: 2 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSFSWLP*CGSNGS
Trigger: TGATCCATTGGAACCACACCAGGGCAACCAAGAGAA...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTTCTTGGGATGCTGACTaGGGACTCGTACATATTCCA +
Preference number: 2 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSSWDAD*GLVHIP
Trigger: TGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGA...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 2 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 2 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATGGAACTAAGTTCCTCTaGGCTGAAGTCCACAAGCAC +
Preference number: 2 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNGTKFL*AEVHKH
Trigger: GTGCTTGTGGACTTCAGCCCAGAGGAACTTAGTTCC...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCCTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 2 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR TCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATATGTTCCTAAGTGTTTaGAGTCCGGGAACTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNMFLSV*SPGTQP
Trigger: AGGCTGAGTTCCCGGACTTCAAACACTTAGGAACAT...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR TCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGATGTTCCTAAGTGTTTaGAGTCCGGGAACTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMMFLSV*SPGTQP
Trigger: AGGCTGAGTTCCCGGACTTCAAACACTTAGGAACAT...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR TCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGAGCTTCTTTCCGGAGTaGGGGTCTTGGGGTCATTCA +
Preference number: 2 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLESFFPE*GSWGHS
Trigger: TGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCT...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGATCAGAGTCCTGGCTCTaGTTCTTTGTGAGTTTGGGT +
Preference number: 2 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGSESWL*FFVSLG
Trigger: ACCCAAACTCACAAAGAACCAGAGCCAGGACTCTGA...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATTCAGAGTCCTGGCTCTaGTTCTTTGTGAGTTTGGGT +
Preference number: 2 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNSESWL*FFVSLG
Trigger: ACCCAAACTCACAAAGAACCAGAGCCAGGACTCTGA...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATCAGGAATCAGAGTCCTaGCTCTGGTTCTTTGTGAGT +
Preference number: 2 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNQESES*LWFFVS
Trigger: ACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTG...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGCAGGAATCAGAGTCCTaGCTCTGGTTCTTTGTGAGT +
Preference number: 2 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMQESES*LWFFVS
Trigger: ACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTG...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAGGAACTAAGTTCCTCTaGGCTGAAGTCCACAAGCAC +
Preference number: 2 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRGTKFL*AEVHKH
Trigger: GTGCTTGTGGACTTCAGCCCAGAGGAACTTAGTTCC...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGCTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 2 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 2 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGATTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 2 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTTCTCTTGGTTGCCCTaGTGTGGTTCCAATGGATCA +
Preference number: 2 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYFSWLP*CGSNGS
Trigger: TGATCCATTGGAACCACACCAGGGCAACCAAGAGAA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCATGTCTGTTGAGGTGTaGCATGAGATAGAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTMSVEV*HEIEGF
Trigger: GAAGCCTTCTATCTCATGCCACACCTCAACAGACAT...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR TCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTCTCCTCTTCCAGGCGTaGGATAATGTCAGGTTTAGA +
Preference number: 2 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPLLFQA*DNVRFR
Trigger: TCTAAACCTGACATTATCTCACGCCTGGAAGAGGAG...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp GAAAACATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 2 (lower is better)
Translates to: ENIQSSPPDCEFLHVHRDGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...ATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGCTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTG +
Preference number: 2 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMLLRAT*VLKVRL
Trigger: CAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAG...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTCTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 2 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAATTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 2 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CAA 90 bp ATCCGTTCGTGTCTCCTAAGGGCTACTTGCGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTGTGTTTGTTCTCTTGGGATGCTGAC +
Preference number: 2 (lower is better)
Translates to: IRSCLLRATCVLKVR*QNSHLLCLFSWDAD
Trigger: GTCAGCATCCCAAGAGAACAAACACAACAGATGTGAATTTTGCAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGACACGAACGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CAA 90 bp TGGTACCGAGTGGAACTTCAAAAATACGAGCCTTGGACTAAACTTTaGGGGAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGA +
Preference number: 2 (lower is better)
Translates to: WYRVELQKYEPWTKL*GKRNILQMEQQKLR
Trigger: TCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAAGTTTAGTCCAAGGCTCGTATTTTTGAAGTTCCACTCGGTACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR-3UTR TCA 90 bp GAAAACATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATCCAGAATGGGTCTTCTaGTGTCTGTTGAGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: ENIQSSPPDCEFLHVHRDPEWVF*CLLRCG
Trigger: GCCACACCTCAACAGACATCAGAAGACCCATTCTGG...ATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTTCTCAAATTCATCACTaGCATAGCTTCTTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: STFIAARSLPTRMGLLMSSQIHH*HSFFPE
Trigger: CTCCGGAAAGAAGCTATGGCAGTGATGAATTTGAGA...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTAC +
Preference number: 2 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPAFYLH*SQKSSY
Trigger: GTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGC...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CCA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACTCAGAGTCCTGGCTCTaGTTCTTTGTGAGTTTGGGT +
Preference number: 2 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHSESWL*FFVSLG
Trigger: ACCCAAACTCACAAAGAACCAGAGCCAGGACTCTGA...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CAA 90 bp ACTTGCGTACTAAAGGTTCGTTTGCAAAATTCACATCTGTTGTGTTaGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGA +
Preference number: 2 (lower is better)
Translates to: TCVLKVRLQNSHLLC*FSWDADWGLVHIPG
Trigger: TCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTGAATTTTGCAAACGAACCTTTAGTACGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGAAAGTTTCTCTTGGTTaGCCTGGTGTGGTTCCAATG +
Preference number: 2 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEKVSLG*PGVVPM
Trigger: CATTGGAACCACACCAGGGCAACCAAGAGAAACTTT...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTTCTCAAATTCATCACTaGCATAGCTTCTTTCCGGAG +
Preference number: 2 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPSQIHH*HSFFPE
Trigger: CTCCGGAAAGAAGCTATGGCAGTGATGAATTTGAGA...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR GCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGAAATCACTGTATGTCTaGTGTCTGTCTCCATTGCAT +
Preference number: 2 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEKSLYV*CLSPLH
Trigger: ATGCAATGGAGACAGACAGCAGACATACAGTGATTT...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR TCA 72 bp AGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCCCTTaGACCTGTGCACAGCACATGCTCTATATCTCCTAC +
Preference number: 3 (lower is better)
Translates to: SSRNFEALALSP*TCAQHMLYISY
Trigger: GTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR GCA 72 bp ATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTG +
Preference number: 3 (lower is better)
Translates to: MLTGDSYIFQEQ*LPGDPFLEDPL
Trigger: CAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR GCA 72 bp CTTGCTGTGGGACAACCCAGGAGGAAGGACTCTTGCTaGCTCATGGGCTTTGAGATGTTGAAGAAGATGCAC +
Preference number: 3 (lower is better)
Translates to: LAVGQPRRKDSC*LMGFEMLKKMH
Trigger: GTGCATCTTCTTCAACATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCTCCTGGGTTGTCCCACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 72 bp TATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTaGCACTTTCCCCTTGAACCTGTGCACAGCACATGC +
Preference number: 3 (lower is better)
Translates to: YTPNGAAETSRP*HFPLEPVHSTC
Trigger: GCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR GCA 72 bp TGTCTTGCTGTGGGACAACCCAGGAGGAAGGACTCTTaGTGCCTCATGGGCTTTGAGATGTTGAAGAAGATG +
Preference number: 3 (lower is better)
Translates to: CLAVGQPRRKDS*CLMGFEMLKKM
Trigger: CATCTTCTTCAACATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCTCCTGGGTTGTCCCACAGCAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR GCA 72 bp GATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: DSHTGRKAFYLH*SQKSSYQNGSS
Trigger: AGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 72 bp TCACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTaGGGACTCGTACATATTCCAGGAGCAGTGCCTTCC +
Preference number: 3 (lower is better)
Translates to: SHLLCLFSWDAD*GLVHIPGAVPS
Trigger: GGAAGGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 72 bp GGACTAAACTTTTGGGGAAGCGGAATATACTCCAAATaGAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCC +
Preference number: 3 (lower is better)
Translates to: GLNFWGSGIYSK*SSRNFEALALS
Trigger: GGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAAGTTTAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR-3UTR CAA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTTCACATCTGTTGTGTTaGTTCTCTTGGGATGCTGAC +
Preference number: 3 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSSHLLC*FSWDAD
Trigger: GTCAGCATCCCAAGAGAACAAACACAACAGATGTGA...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGAATGTTCCTAAGTGTTaGAAGTCCGGGAACTCAGCC +
Preference number: 3 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMNVPKC*KSGNSA
Trigger: GGCTGAGTTCCCGGACTTCAAACACTTAGGAACATT...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATAATGTTCCTAAGTGTTaGAAGTCCGGGAACTCAGCC +
Preference number: 3 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNNVPKC*KSGNSA
Trigger: GGCTGAGTTCCCGGACTTCAAACACTTAGGAACATT...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCAGTCAAAAGTTTCTCTaGGTTGCCCTGGTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFSQKFL*VALVWF
Trigger: GAACCACACCAGGGCAACCAAGAGAAACTTTTGACT...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR TCA 72 bp AAATTCACATCTGTTGTGTTTGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATATTCCAGGAGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: KFTSVVFVLLGC*LGTRTYSRSSA
Trigger: GGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 3 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 3 (lower is better)
Translates to: STFIAARSLPTRMGLLMSKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGAAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 3 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTAGTCAAAAGTTTCTCTaGGTTGCCCTGGTGTGGTTC +
Preference number: 3 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPSQKFL*VALVWF
Trigger: GAACCACACCAGGGCAACCAAGAGAAACTTTTGACT...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCACATCTGTTGTGTTaGTTCTCTTGGGATGCTGAC +
Preference number: 3 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMSHLLC*FSWDAD
Trigger: GTCAGCATCCCAAGAGAACAAACACAACAGATGTGA...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTG +
Preference number: 3 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPVLKVR*QNSHLL
Trigger: CAACAGATGTGAATTTTGCAAACGAACCTTTAGTAC...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTCCTAAGGGCTACTaGCGTACTAAAGGTTCGTTT +
Preference number: 3 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMSPKGY*RTKGSF
Trigger: AAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGA...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp GTCTATGTGGTGAAACCTGTGCTGGTGGTACCGAGTGGAACTTCAAAAATACGACCTTGGACTAAACTTTaGGGGAAGCGGAATATACTC +
Preference number: 3 (lower is better)
Translates to: VYVVKPVLVVPSGTSKIRPWTKL*GKRNIL
Trigger: GAGTATATTCCGCTTCCCCAAAAGTTTAGTCCAAGG...TCGTATTTTTGAAGTTCCACTCGGTACCACCAGCACAGGTTTCACCACATAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR GCA 72 bp CCAGTATGGATCCGTTCGTGTCTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTGCAAAATTCACATCTG +
Preference number: 3 (lower is better)
Translates to: PVWIRSCLLRAT*VLKVRLQNSHL
Trigger: CAGATGTGAATTTTGCAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGACACGAACGGATCCATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 72 bp CAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATaGATCATCATGAGACTCTCCTTGACAAATCACTGT +
Preference number: 3 (lower is better)
Translates to: QKFLLVALVWFQ*IIMRLSLTNHC
Trigger: ACAGTGATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 72 bp TATAGGAGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATGAGACTCTCCTTGACA +
Preference number: 3 (lower is better)
Translates to: YRSQKFLLVALV*FQWIIMRLSLT
Trigger: TGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACTCCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR-3UTR CAA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 3 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
3UTR-3UTR CAA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR GCA 72 bp CATCATGAGACTCTCCTTGACAAATCACTGTATGTCTaGTGTCTGTCTCCATTGCATATGATTCCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: HHETLLDKSLYV*CLSPLHMIPPL
Trigger: AAGAGGAGGAATCATATGCAATGGAGACAGACAGCAGACATACAGTGATTTGTCAAGGAGAGTCTCATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CCA 72 bp TGGAACTTCAAAAATACGAGCCTTGGACTAAACTTTTaGGGAAGCGGAATATACTCCAAATGGAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: WNFKNTSLGLNF*GSGIYSKWSSR
Trigger: TCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAAGTTTAGTCCAAGGCTCGTATTTTTGAAGTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593931.1
3UTR-3UTR CAA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 3 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGCCACCAGCCCAGGGTaGACATCTCCCGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSATSPG*TSPAPP
Trigger: GGGAGGCGCGGGAGATGTCCACCCTGGGCTGGTGGC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCGCCACCAGCCCAGGGTaGACATCTCCCGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLATSPG*TSPAPP
Trigger: GGGAGGCGCGGGAGATGTCCACCCTGGGCTGGTGGC...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGGCCACCAGCCCAGGGTaGACATCTCCCGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMATSPG*TSPAPP
Trigger: GGGAGGCGCGGGAGATGTCCACCCTGGGCTGGTGGC...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS-3UTR CCA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCACTTGGGTTCCTGGTGTaGGACCAGCGGTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPLGFLV*DQRSRG
Trigger: GCCACGAGACCGCTGGTCCCACACCAGGAACCCAAG...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTCCTCAGGGTCCCACCTaGGACCCAGCAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: LKSGNSASGIRVLALVLCPQGPT*DPADGR
Trigger: TCTGCCATCTGCTGGGTCCCAGGTGGGACCCTGAGG...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGGACCAAGAGCTCGATaGTCTCCTCCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPGPRAR*SPPWCG
Trigger: CCCGCACCAAGGAGGAGATCATCGAGCTCTTGGTCC...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCCCTGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: RNILQMEQQKLRGPGTFPCFLGS*CGTSGL
Trigger: GAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCA...GGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCTGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSCFLGS*CGTSGL
Trigger: GAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCA...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp CCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTGGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PGTQPQESESWLWFFVSLGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...CAAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGCCACCAGCCCAGGGTaGACATCTCCCGCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKATSPG*TSPAPP
Trigger: GGGAGGCGCGGGAGATGTCCACCCTGGGCTGGTGGC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593711.6
ENST00000599935.5
ENST00000629319.2
CDS-3UTR CCA 90 bp AGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCGGACCAGCGGTCTCGTaGCTCCATGTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGIYSKWSSRNFEALALSGPAVS*LHVSAS
Trigger: AGAAGCAGAGACATGGAGCCACGAGACCGCTGGTCC...GGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTGGACCAGCGGTCTCGTaGCTCCATGTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFGPAVS*LHVSAS
Trigger: AGAAGCAGAGACATGGAGCCACGAGACCGCTGGTCC...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCCTTGGGTTCCTGGTGTaGGACCAGCGGTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLLGFLV*DQRSRG
Trigger: GCCACGAGACCGCTGGTCCCACACCAGGAACCCAAG...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGGGACTCATAAGCCCTaGAGTCCCTGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPGTHKP*SPCRPL
Trigger: GAGAGGACGACAGGGACTCCAGGGCTTATGAGTCCC...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCCCTTGAACCTGTGCACAGCAAAAGAATGGACTGAGTaGGGTGGTGAGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: EQQKLRGPGTFPLNLCTAKEWTE*GGEDSL
Trigger: AAGAGAGTCCTCACCACCTCACTCAGTCCATTCTTT...TGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR TCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCCAGAATGGGTCTTCTaGTGTCTGTTGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSPEWVF*CLLRCG
Trigger: GCCACACCTCAACAGACATCAGAAGACCCATTCTGG...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGAAGACGCGGCAGCCTGTaGCCGTCAGTACTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGRRGSL*PSVLRD
Trigger: GTCCCTGAGTACTGACGGTCACAGGCTGCCGCGTCT...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS-3UTR GCA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp GAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCCCTTGAACCTGTGCACAGCAGTGGTTAAGACTCACTaGTTCTTGGGTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: EQQKLRGPGTFPLNLCTAVVKTH*FLGSWC
Trigger: ACACCAGGAACCCAAGAAGCAGTGAGTCTTAACCAC...TGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGCTTGGGTTCCTGGTGTaGGACCAGCGGTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMLGFLV*DQRSRG
Trigger: GCCACGAGACCGCTGGTCCCACACCAGGAACCCAAG...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTGGGACTCATAAGCCCTaGAGTCCCTGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSGTHKP*SPCRPL
Trigger: GAGAGGACGACAGGGACTCCAGGGCTTATGAGTCCC...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGGGAGCAGTGCCTTCCTaGGGATCCTTTCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: FEVRELSLRNQSPGSGSLGAVPS*GSFPRG
Trigger: TCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCC...CAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TCGAGGCCCTGGCACTTTCCCCTTGAACCTGTGCACAGCACATGCTCTATATCTAGACTCACTGCTTCTTaGGTTCCTGGTGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: SRPWHFPLEPVHSTCSISRLTAS*VPGVGP
Trigger: TGGTCCCACACCAGGAACCCAAGAAGCAGTGAGTCT...AGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATCCTCAGGGTCCCACCTaGGACCCAGCAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNPQGPT*DPADGR
Trigger: TCTGCCATCTGCTGGGTCCCAGGTGGGACCCTGAGG...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
3UTR CAA 72 bp GAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCCCCTaGAACCTGTGCACAGCACATGCTCTATATCTCCTA +
Preference number: 4 (lower is better)
Translates to: EQQKLRGPGTFP*NLCTAHALYLL
Trigger: TAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTCTGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR TCA 90 bp TTTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGAGTCCCGGTCACCACTaGAAGAATGGACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: FEVRELSLRNQSPGSGSLSPGHH*KNGLSE
Trigger: CTCACTCAGTCCATTCTTTCAGTGGTGACCGGGACT...CAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCAGCTTCTTTCCGGAGTaGGGGTCTTGGGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCSFFPE*GSWGHS
Trigger: TGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCT...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATAT +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSVLLGC*LGTRTY
Trigger: ATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAAC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp TTTTGGGGAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGCTGGCACTTTCCCCTTaGACCTGTGCACAGCACATG +
Preference number: 4 (lower is better)
Translates to: FWGSGIYSKWSSRNFEALLALSP*TCAQHM
Trigger: CATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAG...CAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR GCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCAGGAAGGACTCTTGCTaGCTCATGGGCTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSRKDSC*LMGFEM
Trigger: CATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCT...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTGTGCGGGTCTCCGGCTaGACCCAGCCACCTAGCGTT +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLVRVSG*TQPPSV
Trigger: AACGCTAGGTGGCTGGGTCCAGCCGGAGACCCGCAC...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593711.6
CDS-3UTR CCA 90 bp GGACTAAACTTTTGGGGAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCCTTGGGTTCCTGGTGTaGGACCAGCGGTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: GLNFWGSGIYSKWSSRNFLGFLV*DQRSRG
Trigger: GCCACGAGACCGCTGGTCCCACACCAGGAACCCAAG...GAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAAGTTTAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTCFLGS*CGTSGL
Trigger: GAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCA...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCGGGACTCATAAGCCCTaGAGTCCCTGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLGTHKP*SPCRPL
Trigger: GAGAGGACGACAGGGACTCCAGGGCTTATGAGTCCC...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCAAGTATGTCTTGCTGTaGGACAACCCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSKYVLL*DNPGGR
Trigger: CCTTCCTCCTGGGTTGTCCCACAGCAAGACATACTT...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTGAAGTATGTCTTGCTGTaGGACAACCCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGTQPQESESWLWFFVSLKYVLL*DNPGGR
Trigger: CCTTCCTCCTGGGTTGTCCCACAGCAAGACATACTT...CAAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCACCTCGACTGGTGCTTaGGTAGGCACTTCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCTSTGA*VGTSLG
Trigger: TCCAAGAGAAGTGCCTACCCAAGCACCAGTCGAGGT...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CCA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTCAAGGAAACCTCGACTaGTGCTTGGGTAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: LKSGNSASGIRVLALVLCQGNLD*CLGRHF
Trigger: GAAGTGCCTACCCAAGCACCAGTCGAGGTTTCCTTG...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTCCTCAGGGTCCCACCTaGGACCCAGCAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPPQGPT*DPADGR
Trigger: TCTGCCATCTGCTGGGTCCCAGGTGGGACCCTGAGG...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAGGACCAAGAGCTCGATaGTCTCCTCCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTGPRAR*SPPWCG
Trigger: CCCGCACCAAGGAGGAGATCATCGAGCTCTTGGTCC...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTGGACCAAGAGCTCGATaGTCTCCTCCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPGPRAR*SPPWCG
Trigger: CCCGCACCAAGGAGGAGATCATCGAGCTCTTGGTCC...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTTCCTGGATTGTGTTGTaGGGTTTCCTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSSWIVL*GFLSSA
Trigger: CGCTGAGGACAGGAAACCTCACAACACAATCCAGGA...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAGCAGGGACAGAGTCCTaGGCAAGGAAACCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQAGTES*ARKPRE
Trigger: CTCCCTCGGTTTCCTTGCTCAGGACTCTGTCCCTGC...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCTCCTCTTCCAGGCGTaGGATAATGTCAGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSLLFQA*DNVRFR
Trigger: TCTAAACCTGACATTATCTCACGCCTGGAAGAGGAG...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCTGCCTCATGGGCTTTaGGATGTTGAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSLPHGL*DVEEDA
Trigger: TGCATCTTCTTCAACATCTCAAAGCCCATGAGGCAG...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGATATGAATTCCGACTaGAGACTCTGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSDMNSD*RLCHSH
Trigger: GTGACTGTGGCAGAGTCTTCAGTCGGAATTCATATC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTAGGAAGGACTCTTGCTaGCTCATGGGCTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFRKDSC*LMGFEM
Trigger: CATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCT...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp GGAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGGCACTTTCATGTCGTCGTCGCTaGTCACGTCACTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSGIYSKWSSRNFEALALSCRRR*SRHCCC
Trigger: ACAACAACAGTGACGTGACCAGCGACGACGACATGA...AAGTGCCAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATGGACCAGCGGTCTCGTaGCTCCATGTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNGPAVS*LHVSAS
Trigger: AGAAGCAGAGACATGGAGCCACGAGACCGCTGGTCC...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGAGGACCAGCGGTCTCGTaGCTCCATGTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGGPAVS*LHVSAS
Trigger: AGAAGCAGAGACATGGAGCCACGAGACCGCTGGTCC...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTTGGGTTCCTGGTGTaGGACCAGCGGTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTLGFLV*DQRSRG
Trigger: GCCACGAGACCGCTGGTCCCACACCAGGAACCCAAG...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACCTTGGGTTCCTGGTGTaGGACCAGCGGTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHLGFLV*DQRSRG
Trigger: GCCACGAGACCGCTGGTCCCACACCAGGAACCCAAG...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACTTGGGTTCCTGGTGTaGGACCAGCGGTCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLGFLV*DQRSRG
Trigger: GCCACGAGACCGCTGGTCCCACACCAGGAACCCAAG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMCFLGS*CGTSGL
Trigger: GAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCA...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTCAGAGATTCGCACACTaGACGGAAGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: LKSGNSASGIRVLALVLCQRFAH*TEGFLP
Trigger: AGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTG...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCAAGTATGTCTTGCTGTaGGACAACCCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCKYVLL*DNPGGR
Trigger: CCTTCCTCCTGGGTTGTCCCACAGCAAGACATACTT...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCCCACAGTCACAACACTaGCAGGCTCTCTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLPQSQH*QALSPT
Trigger: CGTTGGAGAGAGAGCCTGCCAGTGTTGTGACTGTGG...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp TTTTGGGGAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGGAAACTTCGAGGCCCTaGCACTTTCCCCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: FWGSGIYSKWSSRNFEALETSRP*HFPLEP
Trigger: AGGTTCAAGGGGAAAGTGCCAGGGCCTCGAAGTTTC...CAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGAACAGGATCCTTTCTaGAACTTCAGACCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSEQDPF*NFRPSS
Trigger: GCTGCTTGGTCTGAAGTTCCAGAAAGGATCCTGTTC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629319.2
CDS-3UTR CCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCGGGTCTCCGGCTGTCTaGGAACAGGATCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFGSPAV*EQDPFW
Trigger: CCAGAAAGGATCCTGTTCCCAGACAGCCGGAGACCC...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597281.5
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGACCAAGAGCTCGATaGTCTCCTCCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGPRAR*SPPWCG
Trigger: CCCGCACCAAGGAGGAGATCATCGAGCTCTTGGTCC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGGACCAAGAGCTCGATaGTCTCCTCCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTGPRAR*SPPWCG
Trigger: CCCGCACCAAGGAGGAGATCATCGAGCTCTTGGTCC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCAGTCCCGGTCACCACTaGAAGAATGGACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLSPGHH*KNGLSE
Trigger: CTCACTCAGTCCATTCTTTCAGTGGTGACCGGGACT...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTCCTGGATTGTGTTGTaGGGTTTCCTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLSWIVL*GFLSSA
Trigger: CGCTGAGGACAGGAAACCTCACAACACAATCCAGGA...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGCAGGGACAGAGTCCTaGGCAAGGAAACCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKAGTES*ARKPRE
Trigger: CTCCCTCGGTTTCCTTGCTCAGGACTCTGTCCCTGC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000593711.6
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGCAGGGACAGAGTCCTaGGCAAGGAAACCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTAGTES*ARKPRE
Trigger: CTCCCTCGGTTTCCTTGCTCAGGACTCTGTCCCTGC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCAGCTTCTTTCCGGAGTaGGGGTCTTGGGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLSFFPE*GSWGHS
Trigger: TGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCT...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATAT +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSVLLGC*LGTRTY
Trigger: ATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAAC...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCCCAGAATGGGTCTTCTaGTGTCTGTTGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTPEWVF*CLLRCG
Trigger: GCCACACCTCAACAGACATCAGAAGACCCATTCTGG...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCCTGCCTCATGGGCTTTaGGATGTTGAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCLPHGL*DVEEDA
Trigger: TGCATCTTCTTCAACATCTCAAAGCCCATGAGGCAG...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TTTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGCTGCCTCATGGGCTTTaGGATGTTGAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: FEVRELSLRNQSPGSGSLLPHGL*DVEEDA
Trigger: TGCATCTTCTTCAACATCTCAAAGCCCATGAGGCAG...CAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTATGTTGAGTGAGGTATaGGGGTCGGCCGAAACATTT +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFMLSEV*GSAETF
Trigger: AAATGTTTCGGCCGACCCTCATACCTCACTCAACAT...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCAGAGGTTTCGGAGTTTaGTCAGGGTCTTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFRGFGV*SGSSEA
Trigger: GGCCTCGGAAGACCCTGATCAAACTCCGAAACCTCT...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS-3UTR GCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSLLRAT*VLKVRL
Trigger: CAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAG...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSAFYLH*SQKSSY
Trigger: GTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCTGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLCFLGS*CGTSGL
Trigger: GAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCA...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTTCAGGTTTAGAGAACTaGTGCCCCAGGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSSGLEN*CPRETR
Trigger: CCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGA...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTCTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: LKSGNSASGIRVLALVLCLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTTTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTTTCTCTTGGTTGCCCTaGTGTGGTTCCAATGGATCA +
Preference number: 4 (lower is better)
Translates to: LKSGNSASGIRVLALVLCFSWLP*CGSNGS
Trigger: TGATCCATTGGAACCACACCAGGGCAACCAAGAGAA...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTTCTTGGGATGCTGACTaGGGACTCGTACATATTCCA +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFSWDAD*GLVHIP
Trigger: TGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGA...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTCCACAGTCACAACACTaGCAGGCTCTCTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSPQSQH*QALSPT
Trigger: CGTTGGAGAGAGAGCCTGCCAGTGTTGTGACTGTGG...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTGCGTCATGTGGGAGTaGCCATCGTCTTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYCVMWE*PSSSAS
Trigger: GCTTGCTGAAGACGATGGCCACTCCCACATGACGCA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CCA 90 bp TTTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTCAGAGTCCTGGCTCTaGTTCTTTGTGAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: FEVRELSLRNQSPGSGSLSESWL*FFVSLG
Trigger: ACCCAAACTCACAAAGAACCAGAGCCAGGACTCTGA...CAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTCAGGAATCAGAGTCCTaGCTCTGGTTCTTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFQESES*LWFFVS
Trigger: ACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTG...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCAAAACACAGGTATCTaGACCCAGCCACCTAGCGTT +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSQNTGI*TQPPSV
Trigger: AACGCTAGGTGGCTGGGTCCAGATACCTGTGTTTTG...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000650111.1
3UTR CAA 72 bp AGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATaGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RFAHWTEGFLPS*QPEVFLPEWVF
Trigger: GAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GTCTATGTGGTGAAACCTGTGCTGGTGGTACCGAGTGGAACTTCAAAAATACGAAGTCCCGGTCACCACTaGAAGAATGGACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VYVVKPVLVVPSGTSKIRSPGHH*KNGLSE
Trigger: CTCACTCAGTCCATTCTTTCAGTGGTGACCGGGACT...TCGTATTTTTGAAGTTCCACTCGGTACCACCAGCACAGGTTTCACCACATAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR TCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGAAGTCCCGGTCACCACTaGAAGAATGGACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGSPGHH*KNGLSE
Trigger: CTCACTCAGTCCATTCTTTCAGTGGTGACCGGGACT...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTCACCACATTTTGGTATaGTTCAGCATCCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: LKSGNSASGIRVLALVLCHHILV*FSILRS
Trigger: CGATCTCAGGATGCTGAATCATACCAAAATGTGGTG...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTCCTGGATTGTGTTGTaGGGTTTCCTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYSWIVL*GFLSSA
Trigger: CGCTGAGGACAGGAAACCTCACAACACAATCCAGGA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCTCCTGGATTGTGTTGTaGGGTTTCCTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFSWIVL*GFLSSA
Trigger: CGCTGAGGACAGGAAACCTCACAACACAATCCAGGA...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCATGTTCCTAAGTGTTTaGAGTCCGGGAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLMFLSV*SPGTGT
Trigger: GGTCCCAGTTCCCGGACTTCAAACACTTAGGAACAT...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTAGCTTCTTTCCGGAGTaGGGGTCTTGGGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSSFFPE*GSWGHS
Trigger: TGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCT...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTGATATGAATTCCGACTaGAGACTCTGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSDMNSD*RLCHSH
Trigger: GTGACTGTGGCAGAGTCTTCAGTCGGAATTCATATC...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCAAGGTTTCTCAACAGTaGTCGCACTCAACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSKVSQQ*SHSTVF
Trigger: GAAAACTGTTGAGTGCGATCACTGTTGAGAAACCTT...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGAAAAGTGTGTGCTGTaGCTAAAGGTTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QGGASERPSHTHNTLGGSEKCVL*LKVSQQ
Trigger: CTGTTGAGAAACCTTTAGTCACAGCACACACTTTTC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp ACTTTCCCCTTGAACCTGTGCACAGCACATGCTCTATATCTCCTACTGGGAAAGAACAGGTCTATGTGGTaGAACCTGTGCTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TFPLNLCTAHALYLLLGKNRSMW*NLCWWY
Trigger: GTACCACCAGCACAGGTTTCACCACATAGACCTGTT...CTTTCCCAGTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGCAGGGACAGAGTCCTaGGCAAGGAAACCTCGACTG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKAGTES*ARKPRL
Trigger: CAGTCGAGGTTTCCTTGCTCAGGACTCTGTCCCTGC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR TCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAAGAGGTTTCGGAGTTTaGTCAGGGTCTTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTRGFGV*SGSSEA
Trigger: GGCCTCGGAAGACCCTGATCAAACTCCGAAACCTCT...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629319.2
CDS-3UTR GCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTAAAGTTTCTCTTGGTTaGCCTGGTGTGGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFKVSLG*PGVVPM
Trigger: CATTGGAACCACACCAGGGCAACCAAGAGAAACTTT...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATTAAGTATGTCTTaGTGTGGGACAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPELSMS*CGTTQE
Trigger: CTCCTGGGTTGTCCCACAGCAAGACATACTTAATTC...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp CTATGTGGTGAAACCTGTGCTGGTGGTACCGAGTGGAACTTCAAAAATACGAGCCCTGTGCACAGCACATaGTCTATATCTCCTACTGGG +
Preference number: 4 (lower is better)
Translates to: LCGETCAGGTEWNFKNTSPVHST*SISPTG
Trigger: CCCAGTAGGAGATATAGAGCATGTGCTGTGCACAGG...GCTCGTATTTTTGAAGTTCCACTCGGTACCACCAGCACAGGTTTCACCACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR GCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATGGAAACCTCGACTGGTaGTTGGGTAGGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNGNLDW*LGRHFS
Trigger: AGAGAAGTGCCTACCCAAGCACCAGTCGAGGTTTCC...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CCA 90 bp CCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTGGTTGTTGTCGTCTTCTaGTTGGTACATCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PGTQPQESESWLWFFVSLVVVVF*LVHLLV
Trigger: TACAAGGAGATGTACCAACCAGAAGACGACAACAAC...CAAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTGGACCAGCGGTCTCGTaGCTCCATGTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLGPAVS*LHVSAS
Trigger: AGAAGCAGAGACATGGAGCCACGAGACCGCTGGTCC...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGACCAGCGGTCTCGTaGCTCCATGTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGPAVS*LHVSAS
Trigger: AGAAGCAGAGACATGGAGCCACGAGACCGCTGGTCC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKCFLGS*CGTSGL
Trigger: GAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGTGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLECFLGS*CGTSGL
Trigger: GAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCA...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTGGGACTCATAAGCCCTaGAGTCCCTGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLGTHKP*SPCRPL
Trigger: GAGAGGACGACAGGGACTCCAGGGCTTATGAGTCCC...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGGGGACTCATAAGCCCTaGAGTCCCTGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEGTHKP*SPCRPL
Trigger: GAGAGGACGACAGGGACTCCAGGGCTTATGAGTCCC...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGGACTCATAAGCCCTaGAGTCCCTGTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGTHKP*SPCRPL
Trigger: GAGAGGACGACAGGGACTCCAGGGCTTATGAGTCCC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACATTGAAGTCCGGGAACTaGGACCCAGCAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTLKSGN*DPADGR
Trigger: TCTGCCATCTGCTGGGTCCCAGTTCCCGGACTTCAA...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCTTGAAGTCCGGGAACTaGGACCCAGCAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLLKSGN*DPADGR
Trigger: TCTGCCATCTGCTGGGTCCCAGTTCCCGGACTTCAA...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCGGAACTAAGTTCCTCTaGGCTGAAGTCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTGTKFL*AEVHKH
Trigger: GTGCTTGTGGACTTCAGCCCAGAGGAACTTAGTTCC...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTTTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAGGAGCAGTGCCTTCCTaGGGATCCTTTCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRGAVPS*GSFPRG
Trigger: TCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCC...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCGGAGCAGTGCCTTCCTaGGGATCCTTTCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLGAVPS*GSFPRG
Trigger: TCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCC...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCAAGTATGTCTTGCTGTaGGACAACCCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTKYVLL*DNPGGR
Trigger: CCTTCCTCCTGGGTTGTCCCACAGCAAGACATACTT...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTCCACAGTCACAACACTaGCAGGCTCTCTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPPQSQH*QALSPT
Trigger: CGTTGGAGAGAGAGCCTGCCAGTGTTGTGACTGTGG...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACCACAGTCACAACACTaGCAGGCTCTCTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRPQSQH*QALSPT
Trigger: CGTTGGAGAGAGAGCCTGCCAGTGTTGTGACTGTGG...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TCGAGGCCCTGGCACTTTCCCCTTGAACCTGTGCACAGCACATGCTCTATATCTGGAATATACTCCAAATaGAGCAGCAGAAACTTCGAG +
Preference number: 4 (lower is better)
Translates to: SRPWHFPLEPVHSTCSISGIYSK*SSRNFE
Trigger: CTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCC...AGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTTTGGATCTTGATGAGTaGCCCTGCGTCATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSLDLDE*PCVMWE
Trigger: CTCCCACATGACGCAGGGCCACTCATCAAGATCCAA...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCGGTAGGCACTTCTCTTaGATCTTGATGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTGRHFS*ILMSGP
Trigger: AGGGCCACTCATCAAGATCCAAGAGAAGTGCCTACC...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGGTCTCCGGCTGTCTaGGAACAGGATCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGSPAV*EQDPFW
Trigger: CCAGAAAGGATCCTGTTCCCAGACAGCCGGAGACCC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000601070.5
CDS-3UTR TCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAAGTCCCGGTCACCACTaGAAGAATGGACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQSPGHH*KNGLSE
Trigger: CTCACTCAGTCCATTCTTTCAGTGGTGACCGGGACT...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCACCACATTTTGGTATaGTTCAGCATCCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSHHILV*FSILRS
Trigger: CGATCTCAGGATGCTGAATCATACCAAAATGTGGTG...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCTCCTGGATTGTGTTGTaGGGTTTCCTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLSWIVL*GFLSSA
Trigger: CGCTGAGGACAGGAAACCTCACAACACAATCCAGGA...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp GAAAACATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATGCAGGGACAGAGTCCTaGGCAAGGAAACCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ENIQSSPPDCEFLHVHRDAGTES*ARKPRE
Trigger: CTCCCTCGGTTTCCTTGCTCAGGACTCTGTCCCTGC...ATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAAGCTTCTTTCCGGAGTaGGGGTCTTGGGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTSFFPE*GSWGHS
Trigger: TGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCT...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATAT +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYVLLGC*LGTRTY
Trigger: ATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAAC...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCATGTTGAGTGAGGTATaGGGGTCGGCCGAAACATTT +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTMLSEV*GSAETF
Trigger: AAATGTTTCGGCCGACCCTCATACCTCACTCAACAT...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCATGTTGAGTGAGGTATaGGGGTCGGCCGAAACATTT +
Preference number: 4 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLMLSEV*GSAETF
Trigger: AAATGTTTCGGCCGACCCTCATACCTCACTCAACAT...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCGTTGATAATGTTGAGTaGGGTATGAGGGTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFVDNVE*GMRVGR
Trigger: TCGGCCGACCCTCATACCTCACTCAACATTATCAAC...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTAAGGTTTCTCAACAGTaGTCGCACTCAACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LKSGNSASGIRVLALVLCKVSQQ*SHSTVF
Trigger: GAAAACTGTTGAGTGCGATCACTGTTGAGAAACCTT...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAAAAGTGTGTGCTGTaGCTAAAGGTTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPEKCVL*LKVSQQ
Trigger: CTGTTGAGAAACCTTTAGTCACAGCACACACTTTTC...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAGAGGTTTCGGAGTTTaGTCAGGGTCTTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKRGFGV*SGSSEA
Trigger: GGCCTCGGAAGACCCTGATCAAACTCCGAAACCTCT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000599935.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTTGGAGGAACCAAACATaGGTCAACAGGAAAGACGCG +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSWRNQT*VNRKDA
Trigger: CGCGTCTTTCCTGTTGACTCATGTTTGGTTCCTCCA...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS-3UTR GCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGTTTAGAGAACTGGTaGCCCAGGGAGACCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGLENW*PRETRF
Trigger: GAACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTTCTCAAATTCATCACTaGCATAGCTTCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: SGNSASGIRVLALVLCEFSQIHH*HSFFPE
Trigger: CTCCGGAAAGAAGCTATGGCAGTGATGAATTTGAGA...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSLLRAT*VLKVRL
Trigger: CAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAG...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATAGGAAGGACTCTTGCTaGCTCATGGGCTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNRKDSC*LMGFEM
Trigger: CATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCT...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGAAGGAAGGACTCTTGCTaGCTCATGGGCTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGRKDSC*LMGFEM
Trigger: CATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCT...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATTGAAGTCCGGGAACTaGGACCCAGCAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLKSGN*DPADGR
Trigger: TCTGCCATCTGCTGGGTCCCAGTTCCCGGACTTCAA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593711.6
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCGGAACTAAGTTCCTCTaGGCTGAAGTCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFGTKFL*AEVHKH
Trigger: GTGCTTGTGGACTTCAGCCCAGAGGAACTTAGTTCC...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACATCAGGTTTAGAGAACTaGTGCCCCAGGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTSGLEN*CPRETR
Trigger: CCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGA...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCAGGTTTAGAGAACTaGTGCCCCAGGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSGLEN*CPRETR
Trigger: CCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTTCAGGTTTAGAGAACTaGTGCCCCAGGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLSGLEN*CPRETR
Trigger: CCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGA...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCTCTTGGTTGCCCTaGTGTGGTTCCAATGGATCA +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTFSWLP*CGSNGS
Trigger: TGATCCATTGGAACCACACCAGGGCAACCAAGAGAA...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGAGCAGTGCCTTCCTaGGGATCCTTTCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGAVPS*GSFPRG
Trigger: TCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGGGAGCAGTGCCTTCCTaGGGATCCTTTCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEGAVPS*GSFPRG
Trigger: TCCTCTAGGAAAGGATCCCCAGGAAGGCACTGCTCC...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACCACAGTCACAACACTaGCAGGCTCTCTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKPQSQH*QALSPT
Trigger: CGTTGGAGAGAGAGCCTGCCAGTGTTGTGACTGTGG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATCAAAACACAGGTATCTaGACCCAGCCACCTAGCGTT +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYQNTGI*TQPPSV
Trigger: AACGCTAGGTGGCTGGGTCCAGATACCTGTGTTTTG...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGAAATTCTCCAGCAGAGTaGCGAGCTTCTCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGNSPAE*RASHSS
Trigger: AGAACTGTGAGAAGCTCGTCACTCTGCTGGAGAATT...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGAAAAGAATGGACTGAGTaGGGTGGTGAGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGKEWTE*GGEDSL
Trigger: AAGAGAGTCCTCACCACCTCACTCAGTCCATTCTTT...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGAAAGAATGGACTGAGTaGGGTGGTGAGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMKEWTE*GGEDSL
Trigger: AAGAGAGTCCTCACCACCTCACTCAGTCCATTCTTT...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAAAGAATGGACTGAGTaGGGTGGTGAGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYKEWTE*GGEDSL
Trigger: AAGAGAGTCCTCACCACCTCACTCAGTCCATTCTTT...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAGTCCCGGTCACCACTaGAAGAATGGACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSPGHH*KNGLSE
Trigger: CTCACTCAGTCCATTCTTTCAGTGGTGACCGGGACT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCCTGGATTGTGTTGTaGGGTTTCCTGTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSWIVL*GFLSSA
Trigger: CGCTGAGGACAGGAAACCTCACAACACAATCCAGGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAGCTTCTTTCCGGAGTaGGGGTCTTGGGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSFFPE*GSWGHS
Trigger: TGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACCAGAATGGGTCTTCTaGTGTCTGTTGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTPEWVF*CLLRCG
Trigger: GCCACACCTCAACAGACATCAGAAGACCCATTCTGG...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACCCAGAATGGGTCTTCTaGTGTCTGTTGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHPEWVF*CLLRCG
Trigger: GCCACACCTCAACAGACATCAGAAGACCCATTCTGG...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACCAGAATGGGTCTTCTaGTGTCTGTTGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKPEWVF*CLLRCG
Trigger: GCCACACCTCAACAGACATCAGAAGACCCATTCTGG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATCTGCCTCATGGGCTTTaGGATGTTGAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNLPHGL*DVEEDA
Trigger: TGCATCTTCTTCAACATCTCAAAGCCCATGAGGCAG...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAGTTGATAATGTTGAGTaGGGTATGAGGGTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTVDNVE*GMRVGR
Trigger: TCGGCCGACCCTCATACCTCACTCAACATTATCAAC...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAGTTGATAATGTTGAGTaGGGTATGAGGGTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRVDNVE*GMRVGR
Trigger: TCGGCCGACCCTCATACCTCACTCAACATTATCAAC...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTAFYLH*SQKSSY
Trigger: GTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGC...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAAGGAAGGACTCTTGCTaGCTCATGGGCTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTRKDSC*LMGFEM
Trigger: CATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCT...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTTCATGTCGTCGTCGCTaGTCACGTCACTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPSCRRR*SRHCCC
Trigger: ACAACAACAGTGACGTGACCAGCGACGACGACATGA...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAGGAACTAAGTTCCTCTaGGCTGAAGTCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQGTKFL*AEVHKH
Trigger: GTGCTTGTGGACTTCAGCCCAGAGGAACTTAGTTCC...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATTTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTCTTGGGATGCTGACTaGGGACTCGTACATATTCCA +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYSWDAD*GLVHIP
Trigger: TGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTTGTGTTTGTTCTCTTaGGATGCTGACTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYLCLFS*DADWGL
Trigger: GAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCCAGAGATTCGCACACTaGACGGAAGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLQRFAH*TEGFLP
Trigger: AGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTG...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACAGAGATTCGCACACTaGACGGAAGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRQRFAH*TEGFLP
Trigger: AGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTG...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp GTCTATGTGGTGAAACCTGTGCTGGTGGTACCGAGTGGAACTTCAAAAATACGAGCTGGTGGTACCGAGTaGAACTTCAAAAATACGAGC +
Preference number: 4 (lower is better)
Translates to: VYVVKPVLVVPSGTSKIRAGGTE*NFKNTS
Trigger: GCTCGTATTTTTGAAGTTCCACTCGGTACCACCAGC...TCGTATTTTTGAAGTTCCACTCGGTACCACCAGCACAGGTTTCACCACATAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCAGAGTCCTGGCTCTaGTTCTTTGTGAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMSESWL*FFVSLG
Trigger: ACCCAAACTCACAAAGAACCAGAGCCAGGACTCTGA...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACAGGAATCAGAGTCCTaGCTCTGGTTCTTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGQESES*LWFFVS
Trigger: ACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTG...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACACAAAACACAGGTATCTaGACCCAGCCACCTAGCGTT +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTQNTGI*TQPPSV
Trigger: AACGCTAGGTGGCTGGGTCCAGATACCTGTGTTTTG...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629319.2
CDS-3UTR CCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCGAACAGGATCCTTTCTaGAACTTCAGACCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFEQDPF*NFRPSS
Trigger: GCTGCTTGGTCTGAAGTTCCAGAAAGGATCCTGTTC...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATGGCAGACAAGTGCTTTaGAGGCAGCATTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYGRQVL*RQHFSK
Trigger: CTTAGAGAAATGCTGCCTCCAAAGCACTTGTCTGCC...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS-3UTR TCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCAATTCTCCAGCAGAGTaGCGAGCTTCTCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLNSPAE*RASHSS
Trigger: AGAACTGTGAGAAGCTCGTCACTCTGCTGGAGAATT...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTAATTCTCCAGCAGAGTaGCGAGCTTCTCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPNSPAE*RASHSS
Trigger: AGAACTGTGAGAAGCTCGTCACTCTGCTGGAGAATT...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCAAAGAATGGACTGAGTaGGGTGGTGAGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLKEWTE*GGEDSL
Trigger: AAGAGAGTCCTCACCACCTCACTCAGTCCATTCTTT...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAATGTTCCTAAGTGTTTaGAGTCCGGGAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTMFLSV*SPGTGT
Trigger: GGTCCCAGTTCCCGGACTTCAAACACTTAGGAACAT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAATGTTCCTAAGTGTTTaGAGTCCGGGAACTGGGACC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKMFLSV*SPGTGT
Trigger: GGTCCCAGTTCCCGGACTTCAAACACTTAGGAACAT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000593711.6
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCCTCCTCTTCCAGGCGTaGGATAATGTCAGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLLLFQA*DNVRFR
Trigger: TCTAAACCTGACATTATCTCACGCCTGGAAGAGGAG...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCCTCTTCCAGGCGTaGGATAATGTCAGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRLLFQA*DNVRFR
Trigger: TCTAAACCTGACATTATCTCACGCCTGGAAGAGGAG...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATAT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKVLLGC*LGTRTY
Trigger: ATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAAC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGTTCTCTTGGGATGCTaGCTGGGGACTCGTACATAT +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTVLLGC*LGTRTY
Trigger: ATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAAC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAGATATGAATTCCGACTaGAGACTCTGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQDMNSD*RLCHSH
Trigger: GTGACTGTGGCAGAGTCTTCAGTCGGAATTCATATC...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAGATATGAATTCCGACTaGAGACTCTGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRDMNSD*RLCHSH
Trigger: GTGACTGTGGCAGAGTCTTCAGTCGGAATTCATATC...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCGATATGAATTCCGACTaGAGACTCTGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLDMNSD*RLCHSH
Trigger: GTGACTGTGGCAGAGTCTTCAGTCGGAATTCATATC...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGGTTGATAATGTTGAGTaGGGTATGAGGGTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEVDNVE*GMRVGR
Trigger: TCGGCCGACCCTCATACCTCACTCAACATTATCAAC...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGTTGATAATGTTGAGTaGGGTATGAGGGTCGGCCGA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKVDNVE*GMRVGR
Trigger: TCGGCCGACCCTCATACCTCACTCAACATTATCAAC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCAAGGTTTCTCAACAGTaGTCGCACTCAACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTKVSQQ*SHSTVF
Trigger: GAAAACTGTTGAGTGCGATCACTGTTGAGAAACCTT...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAATGTTCCTAAGTGTTTaGAGTCCGGGAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRMFLSV*SPGTQP
Trigger: AGGCTGAGTTCCCGGACTTCAAACACTTAGGAACAT...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTAAATCACTGTATGTCTaGTGTCTGTCTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSKSLYV*CLSPLH
Trigger: ATGCAATGGAGACAGACAGCAGACATACAGTGATTT...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATAAAGTTTCTCTTGGTTaGCCTGGTGTGGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNKVSLG*PGVVPM
Trigger: CATTGGAACCACACCAGGGCAACCAAGAGAAACTTT...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTATATTCCAGGAGCAGTaGCTTCCTGGGGATCCTTTC +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLIFQEQ*LPGDPF
Trigger: GAAAGGATCCCCAGGAAGGCACTGCTCCTGGAATAT...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFLLRAT*VLKVRL
Trigger: CAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAG...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFAFYLH*SQKSSY
Trigger: GTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGC...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAGGAAGGACTCTTGCTaGCTCATGGGCTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKRKDSC*LMGFEM
Trigger: CATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGGAATTAAGTATGTCTTaGTGTGGGACAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMELSMS*CGTTQE
Trigger: CTCCTGGGTTGTCCCACAGCAAGACATACTTAATTC...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CCCTTGAACCTGTGCACAGCACATGCTCTATATCTCCTACTGGGAAAGAAAGTGGTTGTTGTCGTCTTCTaGTTGGTACATCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PLNLCTAHALYLLLGKKVVVVVF*LVHLLV
Trigger: TACAAGGAGATGTACCAACCAGAAGACGACAACAAC...CACTTTCTTTCCCAGTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACATCATGTCGTCGTCGCTaGTCACGTCACTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTSCRRR*SRHCCC
Trigger: ACAACAACAGTGACGTGACCAGCGACGACGACATGA...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCATGTCGTCGTCGCTaGTCACGTCACTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSCRRR*SRHCCC
Trigger: ACAACAACAGTGACGTGACCAGCGACGACGACATGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTTCATGTCGTCGTCGCTaGTCACGTCACTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLSCRRR*SRHCCC
Trigger: ACAACAACAGTGACGTGACCAGCGACGACGACATGA...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGAACTAAGTTCCTCTaGGCTGAAGTCCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGTKFL*AEVHKH
Trigger: GTGCTTGTGGACTTCAGCCCAGAGGAACTTAGTTCC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACACTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCTTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAATTCTCTTGGTTGCCCTaGTGTGGTTCCAATGGATCA +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQFSWLP*CGSNGS
Trigger: TGATCCATTGGAACCACACCAGGGCAACCAAGAGAA...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACATCTTGGGATGCTGACTaGGGACTCGTACATATTCCA +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTSWDAD*GLVHIP
Trigger: TGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGA...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAATTGTGTTTGTTCTCTTaGGATGCTGACTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQLCLFS*DADWGL
Trigger: GAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAA...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTATGTCTGTTGAGGTGTaGCATGAGATAGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSMSVEV*HEIEGF
Trigger: GAAGCCTTCTATCTCATGCCACACCTCAACAGACAT...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACAGAGATTCGCACACTaGACGGAAGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKQRFAH*TEGFLP
Trigger: AGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACAGAGATTCGCACACTaGACGGAAGGCTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTQRFAH*TEGFLP
Trigger: AGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTG...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAAGTATGTCTTGCTGTaGGACAACCCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKKYVLL*DNPGGR
Trigger: CCTTCCTCCTGGGTTGTCCCACAGCAAGACATACTT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAAAGTATGTCTTGCTGTaGGACAACCCAGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTKYVLL*DNPGGR
Trigger: CCTTCCTCCTGGGTTGTCCCACAGCAAGACATACTT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CACTTTCCCCTTGAACCTGTGCACAGCACATGCTCTATATCTCCTACTGGGAAACTTGGACTAAACTTTTaGGGAAGCGGAATATACTCC +
Preference number: 4 (lower is better)
Translates to: HFPLEPVHSTCSISPTGKLGLNF*GSGIYS
Trigger: GGAGTATATTCCGCTTCCCCAAAAGTTTAGTCCAAG...TTTCCCAGTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTTCAGAGTCCTGGCTCTaGTTCTTTGTGAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPSESWL*FFVSLG
Trigger: ACCCAAACTCACAAAGAACCAGAGCCAGGACTCTGA...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAACAGGAATCAGAGTCCTaGCTCTGGTTCTTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQQESES*LWFFVS
Trigger: ACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTG...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACAAAACACAGGTATCTaGACCCAGCCACCTAGCGTT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKQNTGI*TQPPSV
Trigger: AACGCTAGGTGGCTGGGTCCAGATACCTGTGTTTTG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAGAACAGGATCCTTTCTaGAACTTCAGACCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQEQDPF*NFRPSS
Trigger: GCTGCTTGGTCTGAAGTTCCAGAAAGGATCCTGTTC...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000650111.1
3UTR CAA 72 bp CCCAGTATGGATCCGTTCGTGTCTCCTAAGGGCTACTaGCGTACTAAAGGTTCGTTTGCAAAATTCACATCT +
Preference number: 4 (lower is better)
Translates to: PSMDPFVSPKGY*RTKGSFAKFTS
Trigger: AGATGTGAATTTTGCAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGACACGAACGGATCCATACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAAATTCTCCAGCAGAGTaGCGAGCTTCTCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTNSPAE*RASHSS
Trigger: AGAACTGTGAGAAGCTCGTCACTCTGCTGGAGAATT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACAATTCTCCAGCAGAGTaGCGAGCTTCTCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHNSPAE*RASHSS
Trigger: AGAACTGTGAGAAGCTCGTCACTCTGCTGGAGAATT...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAATTCTCCAGCAGAGTaGCGAGCTTCTCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKNSPAE*RASHSS
Trigger: AGAACTGTGAGAAGCTCGTCACTCTGCTGGAGAATT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAAAGAATGGACTGAGTaGGGTGGTGAGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKKEWTE*GGEDSL
Trigger: AAGAGAGTCCTCACCACCTCACTCAGTCCATTCTTT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACACACCACATTTTGGTATaGTTCAGCATCCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTHHILV*FSILRS
Trigger: CGATCTCAGGATGCTGAATCATACCAAAATGTGGTG...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGCTCCTCTTCCAGGCGTaGGATAATGTCAGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLELLFQA*DNVRFR
Trigger: TCTAAACCTGACATTATCTCACGCCTGGAAGAGGAG...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACTCCTCTTCCAGGCGTaGGATAATGTCAGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLLFQA*DNVRFR
Trigger: TCTAAACCTGACATTATCTCACGCCTGGAAGAGGAG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACCTCCTCTTCCAGGCGTaGGATAATGTCAGGTTTAGA +
Preference number: 4 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHLLFQA*DNVRFR
Trigger: TCTAAACCTGACATTATCTCACGCCTGGAAGAGGAG...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACTGCCTCATGGGCTTTaGGATGTTGAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLPHGL*DVEEDA
Trigger: TGCATCTTCTTCAACATCTCAAAGCCCATGAGGCAG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGATATGAATTCCGACTaGAGACTCTGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKDMNSD*RLCHSH
Trigger: GTGACTGTGGCAGAGTCTTCAGTCGGAATTCATATC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAATGTTGAGTGAGGTATaGGGGTCGGCCGAAACATTT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKMLSEV*GSAETF
Trigger: AAATGTTTCGGCCGACCCTCATACCTCACTCAACAT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTAAGGTTTCTCAACAGTaGTCGCACTCAACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSKVSQQ*SHSTVF
Trigger: GAAAACTGTTGAGTGCGATCACTGTTGAGAAACCTT...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTGAAAAGTGTGTGCTGTaGCTAAAGGTTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: STFIAARSLPTRMGLLMSEKCVL*LKVSQQ
Trigger: CTGTTGAGAAACCTTTAGTCACAGCACACACTTTTC...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGATGTTCCTAAGTGTTTaGAGTCCGGGAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEMFLSV*SPGTQP
Trigger: AGGCTGAGTTCCCGGACTTCAAACACTTAGGAACAT...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTAAAGTTTCTCTTGGTTaGCCTGGTGTGGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPKVSLG*PGVVPM
Trigger: CATTGGAACCACACCAGGGCAACCAAGAGAAACTTT...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCTCTCAAATTCATCACTaGCATAGCTTCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFSQIHH*HSFFPE
Trigger: CTCCGGAAAGAAGCTATGGCAGTGATGAATTTGAGA...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQAFYLH*SQKSSY
Trigger: GTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGC...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAGAATTAAGTATGTCTTaGTGTGGGACAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTELSMS*CGTTQE
Trigger: CTCCTGGGTTGTCCCACAGCAAGACATACTTAATTC...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCGTTGTTGTCGTCTTCTaGTTGGTACATCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFVVVVF*LVHLLV
Trigger: TACAAGGAGATGTACCAACCAGAAGACGACAACAAC...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACTGGTGTGGTTCCAATaGATCATCATGAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLVWFQ*IIMRLS
Trigger: GGAGAGTCTCATGATGATCCATTGGAACCACACCAG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATTGGTTGCCCTGGTGTaGTTCCAATGGATCATCATG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLVALV*FQWIIM
Trigger: CATGATGATCCATTGGAACCACACCAGGGCAACCAA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACATTCTCTTGGTTGCCCTaGTGTGGTTCCAATGGATCA +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTFSWLP*CGSNGS
Trigger: TGATCCATTGGAACCACACCAGGGCAACCAAGAGAA...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATTCTCTTGGTTGCCCTaGTGTGGTTCCAATGGATCA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKFSWLP*CGSNGS
Trigger: TGATCCATTGGAACCACACCAGGGCAACCAAGAGAA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCTTGGGATGCTGACTaGGGACTCGTACATATTCCA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSWDAD*GLVHIP
Trigger: TGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACTCTTGGGATGCTGACTaGGGACTCGTACATATTCCA +
Preference number: 4 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHSWDAD*GLVHIP
Trigger: TGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGA...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATTGTGTTTGTTCTCTTaGGATGCTGACTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLCLFS*DADWGL
Trigger: GAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTTTGTGTTTGTTCTCTTaGGATGCTGACTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLLCLFS*DADWGL
Trigger: GAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAA...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAATGTCTGTTGAGGTGTaGCATGAGATAGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRMSVEV*HEIEGF
Trigger: GAAGCCTTCTATCTCATGCCACACCTCAACAGACAT...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGAACAGGATCCTTTCTaGAACTTCAGACCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKEQDPF*NFRPSS
Trigger: GCTGCTTGGTCTGAAGTTCCAGAAAGGATCCTGTTC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
3UTR CAA 72 bp GTGGAACTTCAAAAATACGAGCCTTGGACTAAACTTTaGGGGAAGCGGAATATACTCCAAATGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VELQKYEPWTKL*GKRNILQMEQQ
Trigger: CTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAAGTTTAGTCCAAGGCTCGTATTTTTGAAGTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACACCACATTTTGGTATaGTTCAGCATCCTGAGATCG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKHHILV*FSILRS
Trigger: CGATCTCAGGATGCTGAATCATACCAAAATGTGGTG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCATGCTGAATGAGATATaGATTCCGACTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFMLNEI*IPTEDS
Trigger: AGAGTCTTCAGTCGGAATTCATATCTCATTCAGCAT...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATATGCTGAATGAGATATaGATTCCGACTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNMLNEI*IPTEDS
Trigger: AGAGTCTTCAGTCGGAATTCATATCTCATTCAGCAT...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTGAAAAGTGTGTGCTGTaGCTAAAGGTTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPEKCVL*LKVSQQ
Trigger: CTGTTGAGAAACCTTTAGTCACAGCACACACTTTTC...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAGAAAAGTGTGTGCTGTaGCTAAAGGTTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTEKCVL*LKVSQQ
Trigger: CTGTTGAGAAACCTTTAGTCACAGCACACACTTTTC...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp CACATCTGTTGTGTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCAAATCACTGTATGTCTaGTGTCTGTCTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: HICCVCSLGMLTGDSYIFKSLYV*CLSPLH
Trigger: ATGCAATGGAGACAGACAGCAGACATACAGTGATTT...GAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACACAACAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAAAAGTTTCTCTTGGTTaGCCTGGTGTGGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTKVSLG*PGVVPM
Trigger: CATTGGAACCACACCAGGGCAACCAAGAGAAACTTT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAAAGTTTCTCTTGGTTaGCCTGGTGTGGTTCCAATG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKKVSLG*PGVVPM
Trigger: CATTGGAACCACACCAGGGCAACCAAGAGAAACTTT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCTCTCAAATTCATCACTaGCATAGCTTCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLSQIHH*HSFFPE
Trigger: CTCCGGAAAGAAGCTATGGCAGTGATGAATTTGAGA...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLLRAT*VLKVRL
Trigger: CAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTLLRAT*VLKVRL
Trigger: CAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAG...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACCTCCTAAGGGCTACTTaGGTACTAAAGGTTCGTTTG +
Preference number: 4 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHLLRAT*VLKVRL
Trigger: CAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAG...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKAFYLH*SQKSSY
Trigger: GTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGCTTTCTACCTTCATTaGAGCCAGAAGTCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTAFYLH*SQKSSY
Trigger: GTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGAATTAAGTATGTCTTaGTGTGGGACAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTELSMS*CGTTQE
Trigger: CTCCTGGGTTGTCCCACAGCAAGACATACTTAATTC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGAATTAAGTATGTCTTaGTGTGGGACAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKELSMS*CGTTQE
Trigger: CTCCTGGGTTGTCCCACAGCAAGACATACTTAATTC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGGAATTAAGTATGTCTTaGTGTGGGACAACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEELSMS*CGTTQE
Trigger: CTCCTGGGTTGTCCCACAGCAAGACATACTTAATTC...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAGTTGTTGTCGTCTTCTaGTTGGTACATCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRVVVVF*LVHLLV
Trigger: TACAAGGAGATGTACCAACCAGAAGACGACAACAAC...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAGTTGTTGTCGTCTTCTaGTTGGTACATCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTVVVVF*LVHLLV
Trigger: TACAAGGAGATGTACCAACCAGAAGACGACAACAAC...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp GAAAACATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCATGTCGTCGTCGCTaGTCACGTCACTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ENIQSSPPDCEFLHVHRDSCRRR*SRHCCC
Trigger: ACAACAACAGTGACGTGACCAGCGACGACGACATGA...ATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTATGTCTGTTGAGGTGTaGCATGAGATAGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLMSVEV*HEIEGF
Trigger: GAAGCCTTCTATCTCATGCCACACCTCAACAGACAT...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGATGTCTGTTGAGGTGTaGCATGAGATAGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEMSVEV*HEIEGF
Trigger: GAAGCCTTCTATCTCATGCCACACCTCAACAGACAT...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAATGTCTGTTGAGGTGTaGCATGAGATAGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKMSVEV*HEIEGF
Trigger: GAAGCCTTCTATCTCATGCCACACCTCAACAGACAT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAATGTCTGTTGAGGTGTaGCATGAGATAGAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTMSVEV*HEIEGF
Trigger: GAAGCCTTCTATCTCATGCCACACCTCAACAGACAT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAATGCTGAATGAGATATaGATTCCGACTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTMLNEI*IPTEDS
Trigger: AGAGTCTTCAGTCGGAATTCATATCTCATTCAGCAT...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp GAAAACATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATATGTTGAGTGAGGTATaGGGGTCGGCCGAAACATTT +
Preference number: 4 (lower is better)
Translates to: ENIQSSPPDCEFLHVHRDMLSEV*GSAETF
Trigger: AAATGTTTCGGCCGACCCTCATACCTCACTCAACAT...ATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAAAGGTTTCTCAACAGTaGTCGCACTCAACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTKVSQQ*SHSTVF
Trigger: GAAAACTGTTGAGTGCGATCACTGTTGAGAAACCTT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAAGGTTTCTCAACAGTaGTCGCACTCAACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKKVSQQ*SHSTVF
Trigger: GAAAACTGTTGAGTGCGATCACTGTTGAGAAACCTT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGAAAAGTGTGTGCTGTaGCTAAAGGTTTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKEKCVL*LKVSQQ
Trigger: CTGTTGAGAAACCTTTAGTCACAGCACACACTTTTC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR GCA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCAAATCACTGTATGTCTaGTGTCTGTCTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLKSLYV*CLSPLH
Trigger: ATGCAATGGAGACAGACAGCAGACATACAGTGATTT...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAAAATCACTGTATGTCTaGTGTCTGTCTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTKSLYV*CLSPLH
Trigger: ATGCAATGGAGACAGACAGCAGACATACAGTGATTT...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCTCAAATTCATCACTaGCATAGCTTCTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSQIHH*HSFFPE
Trigger: CTCCGGAAAGAAGCTATGGCAGTGATGAATTTGAGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGTTGTTGTCGTCTTCTaGTTGGTACATCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTVVVVF*LVHLLV
Trigger: TACAAGGAGATGTACCAACCAGAAGACGACAACAAC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGTTGTTGTCGTCTTCTaGTTGGTACATCTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKVVVVF*LVHLLV
Trigger: TACAAGGAGATGTACCAACCAGAAGACGACAACAAC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
3UTR CAA 72 bp TGTCTCCTAAGGGCTACTTGCGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTGTGTTTGTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CLLRATCVLKVR*QNSHLLCLFSW
Trigger: CCAAGAGAACAAACACAACAGATGTGAATTTTGCAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGATGCTGAATGAGATATaGATTCCGACTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEMLNEI*IPTEDS
Trigger: AGAGTCTTCAGTCGGAATTCATATCTCATTCAGCAT...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR TCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAATGCTGAATGAGATATaGATTCCGACTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKMLNEI*IPTEDS
Trigger: AGAGTCTTCAGTCGGAATTCATATCTCATTCAGCAT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR TCA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAATGCTGAATGAGATATaGATTCCGACTGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTMLNEI*IPTEDS
Trigger: AGAGTCTTCAGTCGGAATTCATATCTCATTCAGCAT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR GCA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAAATCACTGTATGTCTaGTGTCTGTCTCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKKSLYV*CLSPLH
Trigger: ATGCAATGGAGACAGACAGCAGACATACAGTGATTT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGAGGCATCCTGCTTCTaGGGTTCCTGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: QGGASERPSHTHNTLGGSEASCF*GSWCGT
Trigger: GGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTCGATGATCTCCTCCTaGGTGCGGGTCTCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLSMISS*VRVSGW
Trigger: CCAGCCGGAGACCCGCACCAAGGAGGAGATCATCGA...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593711.6
CDS-3UTR CAA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTCGATGATCTCCTCCTaGGTGCGGGTCTCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTSMISS*VRVSGW
Trigger: CCAGCCGGAGACCCGCACCAAGGAGGAGATCATCGA...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CAA 90 bp CCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTGCAGAGGTTTCGGAGTTaGATCAGGGTCTTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: PGTQPQESESWLWFFVSLQRFRS*IRVFRG
Trigger: GCCTCGGAAGACCCTGATCAAACTCCGAAACCTCTG...CAAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS TCA 90 bp TGCGGGTCTCCGGCTGCAACCAATCGAGGCAGAGGTTTCGGAGTTTaGTCAGGGTCTTCCGAGGCCCAACAAATTCCACATAGATTAGGT +
Preference number: 5 (lower is better)
Translates to: CGSPAATNRGRGFGV*SGSSEAQQIPHRLG
Trigger: ACCTAATCTATGTGGAATTTGTTGGGCCTCGGAAGACCCTGATCAAACTCCGAAACCTCTGCCTCGATTGGTTGCAGCCGGAGACCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599935.5
ENST00000629319.2
ENST00000650111.1
CDS-3UTR CAA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGCTCGCACCCAAGGCTaGAGCTTTTCAGGGATGATG +
Preference number: 5 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPARTQG*SFSGMM
Trigger: CATCATCCCTGAAAAGCTCAAGCCTTGGGTGCGAGC...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCGAGGCATCCTGCTTCTaGGGTTCCTGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLEASCF*GSWCGT
Trigger: GGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTC...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCACTGGTCACGTCACTGTaGTTGTCGTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPLVTSL*LSSSGW
Trigger: CCAACCAGAAGACGACAACAACAGTGACGTGACCAG...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATGAGGCATCCTGCTTCTaGGGTTCCTGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNEASCF*GSWCGT
Trigger: GGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTC...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TTTTGGGGAAGCGGAATATACTCCAAATGGAGCAGCAGAAACTTCGAGGCCCTGAAGACTCACTGCTTCTaGGGTTCCTGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: FWGSGIYSKWSSRNFEALKTHCF*GSWCGT
Trigger: GGTCCCACACCAGGAACCCAAGAAGCAGTGAGTCTT...CAGGGCCTCGAAGTTTCTGCTGCTCCATTTGGAGTATATTCCGCTTCCCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CAA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCCACTTCTCTTGGATCTaGATGAGTGGCCCTGCGTCA +
Preference number: 5 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCHFSWI*MSGPAS
Trigger: TGACGCAGGGCCACTCATCAAGATCCAAGAGAAGTG...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CAA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTCGATGATCTCCTCCTaGGTGCGGGTCTCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYSMISS*VRVSGC
Trigger: ACAGCCGGAGACCCGCACCAAGGAGGAGATCATCGA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597281.5
CDS-3UTR CAA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCTCGATGATCTCCTCCTaGGTGCGGGTCTCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLSMISS*VRVSGC
Trigger: GCAGCCGGAGACCCGCACCAAGGAGGAGATCATCGA...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629319.2
CDS-3UTR CAA 90 bp CCCTGGCACTTTCCCCTTGAACCTGTGCACAGCACATGCTCTATATCTCCTACTGTCACGTCACTGTTGTaGTCGTCTTCTGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: PWHFPLEPVHSTCSISPTVTSLL*SSSGWY
Trigger: GTACCAACCAGAAGACGACAACAACAGTGACGTGAC...AGTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CAA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCAATGTTCCTAAGTGTTaGAAGTCCGGGAACTGGGAC +
Preference number: 5 (lower is better)
Translates to: QGGASERPSHTHNTLGGSNVPKC*KSGNWD
Trigger: GTCCCAGTTCCCGGACTTCAAACACTTAGGAACATT...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGGCTTTCTACCTTCATaGCAGCCAGAAGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: QGGASERPSHTHNTLGGSGFLPS*QPEVFL
Trigger: TAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp CCCTTGAACCTGTGCACAGCACATGCTCTATATCTCCTACTGGGAAAGAAAGTGCCTGGCACTTTCCCCTaGAACCTGTGCACAGCACAT +
Preference number: 5 (lower is better)
Translates to: PLNLCTAHALYLLLGKKVPGTFP*NLCTAH
Trigger: ATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGG...CACTTTCTTTCCCAGTAGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CAA 90 bp CCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTGTGGTTCTTTGTGAGTTaGGGTAGGTTAAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PGTQPQESESWLWFFVSLWFFVS*GRLSLR
Trigger: CCTGAGGCTTAACCTACCCAAACTCACAAAGAACCA...CAAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCGATGATCTCCTCCTaGGTGCGGGTCTCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSMISS*VRVSGC
Trigger: GCAGCCGGAGACCCGCACCAAGGAGGAGATCATCGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599935.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGTCGATGATCTCCTCCTaGGTGCGGGTCTCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLESMISS*VRVSGC
Trigger: GCAGCCGGAGACCCGCACCAAGGAGGAGATCATCGA...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCCTGGTCACGTCACTGTaGTTGTCGTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLLVTSL*LSSSGW
Trigger: CCAACCAGAAGACGACAACAACAGTGACGTGACCAG...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGAGGCATCCTGCTTCTaGGGTTCCTGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKEASCF*GSWCGT
Trigger: GGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGGAGGCATCCTGCTTCTaGGGTTCCTGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEEASCF*GSWCGT
Trigger: GGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTC...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCTGTCCATTTCAAAGCTaGTTTTCGCCACCACAGGAA +
Preference number: 5 (lower is better)
Translates to: QGGASERPSHTHNTLGGSCPFQS*FSPPQE
Trigger: TTCCTGTGGTGGCGAAAACAAGCTTTGAAATGGACA...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCACCAGCAGATGGCAGATaGTCTAACATCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPPADGR*SNISVF
Trigger: GAACACAGAGATGTTAGACAATCTGCCATCTGCTGG...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTTCCGGAGTGAGGGTCTaGGGGTCATTCATTGTTATA +
Preference number: 5 (lower is better)
Translates to: LKSGNSASGIRVLALVLCSGVRV*GSFIVI
Trigger: TATAACAATGAATGACCCCAAGACCCTCACTCCGGA...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCACGAATTAAGTATGTCTaGCTGTGGGACAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPRIKYV*LWDNPG
Trigger: TCCTGGGTTGTCCCACAGCAAGACATACTTAATTCG...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCATGGTTCTTTGTGAGTTaGGGTAGGTTAAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPWFFVS*GRLSLR
Trigger: CCTGAGGCTTAACCTACCCAAACTCACAAAGAACCA...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GTTTGTTCTCTTGGGATGCTGACTGGGGACTCGTACATATTCCAGGAGCAGTGCAATGTTCCTAAGTGTTaGAAGTCCGGGAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: VCSLGMLTGDSYIFQEQCNVPKC*KSGNSA
Trigger: GGCTGAGTTCCCGGACTTCAAACACTTAGGAACATT...GCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCGATGATCTCCTCCTaGGTGCGGGTCTCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSMISS*VRVSGC
Trigger: ACAGCCGGAGACCCGCACCAAGGAGGAGATCATCGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000601070.5
CDS-3UTR CAA 90 bp AGGCCCTGGCACTTTCCCCTTGAACCTGTGCACAGCACATGCTCTATATCTCCTGTTGTCGTCTTCTGGTaGGTACATCTCCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: RPWHFPLEPVHSTCSISPVVVFW*VHLLVI
Trigger: AATTACAAGGAGATGTACCAACCAGAAGACGACAAC...AGGAGATATAGAGCATGTGCTGTGCACAGGTTCAAGGGGAAAGTGCCAGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CAA 90 bp GTCTATGTGGTGAAACCTGTGCTGGTGGTACCGAGTGGAACTTCAAAAATACGACTGGTCACGTCACTGTaGTTGTCGTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: VYVVKPVLVVPSGTSKIRLVTSL*LSSSGW
Trigger: CCAACCAGAAGACGACAACAACAGTGACGTGACCAG...TCGTATTTTTGAAGTTCCACTCGGTACCACCAGCACAGGTTTCACCACATAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593931.1
CDS-3UTR CAA 90 bp AGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACTGGTCACGTCACTGTaGTTGTCGTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: SSPPDCEFLHVHRDSHTGLVTSL*LSSSGW
Trigger: CCAACCAGAAGACGACAACAACAGTGACGTGACCAG...TCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCCAGCAGATGGCAGATaGTCTAACATCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSPADGR*SNISVF
Trigger: GAACACAGAGATGTTAGACAATCTGCCATCTGCTGG...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: SGNSASGIRVLALVLCEFKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTAGTCAAAAGTTTCTCTaGGTTGCCCTGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSSQKFL*VALVWF
Trigger: GAACCACACCAGGGCAACCAAGAGAAACTTTTGACT...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTTCTCCTAAGGGCTACTaGCGTACTAAAGGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: SGNSASGIRVLALVLCEFSPKGY*RTKGSF
Trigger: AAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGA...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTGGCTTTCTACCTTCATaGCAGCCAGAAGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSGFLPS*QPEVFL
Trigger: TAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCC...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAAACCTCGACTGGTGCTaGGGTAGGCACTTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQNLDWC*GRHFSW
Trigger: CCAAGAGAAGTGCCTACCCAAGCACCAGTCGAGGTT...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS-3UTR CAA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGCTCGCACCCAAGGCTaGAGCTTTTCAGGGATGATG +
Preference number: 5 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTARTQG*SFSGMM
Trigger: CATCATCCCTGAAAAGCTCAAGCCTTGGGTGCGAGC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp TCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGAGTTTGTTGTCGTCTTCTGGTaGGTACATCTCCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: SGNSASGIRVLALVLCEFVVVFW*VHLLVI
Trigger: AATTACAAGGAGATGTACCAACCAGAAGACGACAAC...AAACTCACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGTTGTCGTCTTCTGGTaGGTACATCTCCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: LKSGNSASGIRVLALVLCVVVFW*VHLLVI
Trigger: AATTACAAGGAGATGTACCAACCAGAAGACGACAAC...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GAAAACATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATGAGGCATCCTGCTTCTaGGGTTCCTGGTGTGGGACC +
Preference number: 5 (lower is better)
Translates to: ENIQSSPPDCEFLHVHRDEASCF*GSWCGT
Trigger: GGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTC...ATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTTGTCCATTTCAAAGCTaGTTTTCGCCACCACAGGAA +
Preference number: 5 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSCPFQS*FSPPQE
Trigger: TTCCTGTGGTGGCGAAAACAAGCTTTGAAATGGACA...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCCCAGCAGATGGCAGATaGTCTAACATCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLPADGR*SNISVF
Trigger: GAACACAGAGATGTTAGACAATCTGCCATCTGCTGG...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp ACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: TEIRTLDGRLSTFIAARSKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...ACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCTCCGGAGTGAGGGTCTaGGGGTCATTCATTGTTATA +
Preference number: 5 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTSGVRV*GSFIVI
Trigger: TATAACAATGAATGACCCCAAGACCCTCACTCCGGA...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTCCGGAGTGAGGGTCTaGGGGTCATTCATTGTTATA +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLSGVRV*GSFIVI
Trigger: TATAACAATGAATGACCCCAAGACCCTCACTCCGGA...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCGGCTTTCTACCTTCATaGCAGCCAGAAGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTGFLPS*QPEVFL
Trigger: TAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCC...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACAGAGGTTTCGGAGTTaGATCAGGGTCTTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKQRFRS*IRVFRG
Trigger: GCCTCGGAAGACCCTGATCAAACTCCGAAACCTCTG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599935.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCAGAGGTTTCGGAGTTaGATCAGGGTCTTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLQRFRS*IRVFRG
Trigger: GCCTCGGAAGACCCTGATCAAACTCCGAAACCTCTG...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629319.2
CDS-3UTR CAA 90 bp GTGAATTCTTACACGTTCACAGAGATTCGCACACTGGACGGAAGGCTTTCTACCCAGGACTTCTTAGGTTaGGTGGCAGACAAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: VNSYTFTEIRTLDGRLSTQDFLG*VADKCF
Trigger: AAAGCACTTGTCTGCCACCAAACCTAAGAAGTCCTG...GGTAGAAAGCCTTCCGTCCAGTGTGCGAATCTCTGTGAACGTGTAAGAATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS-3UTR CAA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAGTCACGTCACTGTTGTaGTCGTCTTCTGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTVTSLL*SSSGWY
Trigger: GTACCAACCAGAAGACGACAACAACAGTGACGTGAC...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTGTCACGTCACTGTTGTaGTCGTCTTCTGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPVTSLL*SSSGWY
Trigger: GTACCAACCAGAAGACGACAACAACAGTGACGTGAC...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACCTGGTCACGTCACTGTaGTTGTCGTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHLVTSL*LSSSGW
Trigger: CCAACCAGAAGACGACAACAACAGTGACGTGACCAG...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACTGGTCACGTCACTGTaGTTGTCGTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLVTSL*LSSSGW
Trigger: CCAACCAGAAGACGACAACAACAGTGACGTGACCAG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTGGTCACGTCACTGTaGTTGTCGTCTTCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLLVTSL*LSSSGW
Trigger: CCAACCAGAAGACGACAACAACAGTGACGTGACCAG...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTGTCCATTTCAAAGCTaGTTTTCGCCACCACAGGAA +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLCPFQS*FSPPQE
Trigger: TTCCTGTGGTGGCGAAAACAAGCTTTGAAATGGACA...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTCCAGCAGATGGCAGATaGTCTAACATCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: STFIAARSLPTRMGLLMSPADGR*SNISVF
Trigger: GAACACAGAGATGTTAGACAATCTGCCATCTGCTGG...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GCACACTGGACGGAAGGCTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: AHWTEGFLPSLQPEVFLPIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...TGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TTTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: FEVRELSLRNQSPGSGSLIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...CAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp CTTTCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGAGTCAAAAGTTTCTCTaGGTTGCCCTGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LSTFIAARSLPTRMGLLMSQKFL*VALVWF
Trigger: GAACCACACCAGGGCAACCAAGAGAAACTTTTGACT...CATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp CAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: QGGASERPSHTHNTLGGSVLKVR*QNSHLL
Trigger: CAACAGATGTGAATTTTGCAAACGAACCTTTAGTAC...GCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTCGAATTAAGTATGTCTaGCTGTGGGACAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: STFIAARSLPTRMGLLMSRIKYV*LWDNPG
Trigger: TCCTGGGTTGTCCCACAGCAAGACATACTTAATTCG...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TTTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGCTCTTGAGAATGGAGTaGATAATGTTGAGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: FEVRELSLRNQSPGSGSLLLRME*IMLSEV
Trigger: TACCTCACTCAACATTATCAACTCCATTCTCAAGAG...CAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATTGGTTCTTTGTGAGTTaGGGTAGGTTAAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYWFFVS*GRLSLR
Trigger: CCTGAGGCTTAACCTACCCAAACTCACAAAGAACCA...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GAAAACATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATGCTCGCACCCAAGGCTaGAGCTTTTCAGGGATGATG +
Preference number: 5 (lower is better)
Translates to: ENIQSSPPDCEFLHVHRDARTQG*SFSGMM
Trigger: CATCATCCCTGAAAAGCTCAAGCCTTGGGTGCGAGC...ATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACGTCACGTCACTGTTGTaGTCGTCTTCTGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHVTSLL*SSSGWY
Trigger: GTACCAACCAGAAGACGACAACAACAGTGACGTGAC...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGTCACGTCACTGTTGTaGTCGTCTTCTGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKVTSLL*SSSGWY
Trigger: GTACCAACCAGAAGACGACAACAACAGTGACGTGAC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTGTCACGTCACTGTTGTaGTCGTCTTCTGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLVTSLL*SSSGWY
Trigger: GTACCAACCAGAAGACGACAACAACAGTGACGTGAC...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGGTCACGTCACTGTTGTaGTCGTCTTCTGGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEVTSLL*SSSGWY
Trigger: GTACCAACCAGAAGACGACAACAACAGTGACGTGAC...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACACCAGCAGATGGCAGATaGTCTAACATCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTPADGR*SNISVF
Trigger: GAACACAGAGATGTTAGACAATCTGCCATCTGCTGG...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAAGTCAAAAGTTTCTCTaGGTTGCCCTGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTSQKFL*VALVWF
Trigger: GAACCACACCAGGGCAACCAAGAGAAACTTTTGACT...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCAGTCAAAAGTTTCTCTaGGTTGCCCTGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLSQKFL*VALVWF
Trigger: GAACCACACCAGGGCAACCAAGAGAAACTTTTGACT...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp TTGAAGTCCGGGAACTCAGCCTCAGGAATCAGAGTCCTGGCTCTGGTTCTTTGTGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: LKSGNSASGIRVLALVLCVLKVR*QNSHLL
Trigger: CAACAGATGTGAATTTTGCAAACGAACCTTTAGTAC...ACAAAGAACCAGAGCCAGGACTCTGATTCCTGAGGCTGAGTTCCCGGACTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TCTACCTTCATTGCAGCCAGAAGTCTTCCTACCAGAATGGGTCTTCTGATGTCTTCTCCTAAGGGCTACTaGCGTACTAAAGGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: STFIAARSLPTRMGLLMSSPKGY*RTKGSF
Trigger: AAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGA...AGACATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGAGGCTTTCTACCTTCATaGCAGCCAGAAGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRGFLPS*QPEVFL
Trigger: TAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCC...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCCGAATTAAGTATGTCTaGCTGTGGGACAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLRIKYV*LWDNPG
Trigger: TCCTGGGTTGTCCCACAGCAAGACATACTTAATTCG...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAACGAATTAAGTATGTCTaGCTGTGGGACAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQRIKYV*LWDNPG
Trigger: TCCTGGGTTGTCCCACAGCAAGACATACTTAATTCG...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTTGTCCATTTCAAAGCTaGTTTTCGCCACCACAGGAA +
Preference number: 5 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPCPFQS*FSPPQE
Trigger: TTCCTGTGGTGGCGAAAACAAGCTTTGAAATGGACA...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACCAGCAGATGGCAGATaGTCTAACATCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKPADGR*SNISVF
Trigger: GAACACAGAGATGTTAGACAATCTGCCATCTGCTGG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTAATGTTCCTAAGTGTTaGAAGTCCGGGAACTGGGAC +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLNVPKC*KSGNWD
Trigger: GTCCCAGTTCCCGGACTTCAAACACTTAGGAACATT...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAATGTTCCTAAGTGTTaGAAGTCCGGGAACTGGGAC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKNVPKC*KSGNWD
Trigger: GTCCCAGTTCCCGGACTTCAAACACTTAGGAACATT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000593711.6
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAGTCAAAAGTTTCTCTaGGTTGCCCTGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSQKFL*VALVWF
Trigger: GAACCACACCAGGGCAACCAAGAGAAACTTTTGACT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTTCCGGAGTGAGGGTCTaGGGGTCATTCATTGTTATA +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLSGVRV*GSFIVI
Trigger: TATAACAATGAATGACCCCAAGACCCTCACTCCGGA...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCCGGAGTGAGGGTCTaGGGGTCATTCATTGTTATA +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSGVRV*GSFIVI
Trigger: TATAACAATGAATGACCCCAAGACCCTCACTCCGGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACATCACATCTGTTGTGTTaGTTCTCTTGGGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTSHLLC*FSWDAD
Trigger: GTCAGCATCCCAAGAGAACAAACACAACAGATGTGA...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AGTCAAAAGTTTCTCTTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGATCACATCTGTTGTGTTaGTTCTCTTGGGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: SQKFLLVALVWFQWIIMRSHLLC*FSWDAD
Trigger: GTCAGCATCCCAAGAGAACAAACACAACAGATGTGA...TCTCATGATGATCCATTGGAACCACACCAGGGCAACCAAGAGAAACTTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTTCACATCTGTTGTGTTaGTTCTCTTGGGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPSHLLC*FSWDAD
Trigger: GTCAGCATCCCAAGAGAACAAACACAACAGATGTGA...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGGCTTTCTACCTTCATaGCAGCCAGAAGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTGFLPS*QPEVFL
Trigger: TAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGGCTTTCTACCTTCATaGCAGCCAGAAGTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKGFLPS*QPEVFL
Trigger: TAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACGAATTAAGTATGTCTaGCTGTGGGACAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKRIKYV*LWDNPG
Trigger: TCCTGGGTTGTCCCACAGCAAGACATACTTAATTCG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCGAATTAAGTATGTCTaGCTGTGGGACAACCCAGGA +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLRIKYV*LWDNPG
Trigger: TCCTGGGTTGTCCCACAGCAAGACATACTTAATTCG...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp CAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAACACTCCTCTTGAGAATGGAGTaGATAATGTTGAGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: QVVNKVGLVKGLLTLTTLLLRME*IMLSEV
Trigger: TACCTCACTCAACATTATCAACTCCATTCTCAAGAG...GAGTGTTGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp TTGGTTGCCCTGGTGTGGTTCCAATGGATCATCATGAGACTCTCCTTGACAAATAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LVALVWFQWIIMRLSLTNRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...ATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACCACACCAGGGCAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACAATGTTCCTAAGTGTTaGAAGTCCGGGAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHNVPKC*KSGNSA
Trigger: GGCTGAGTTCCCGGACTTCAAACACTTAGGAACATT...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATGTCCATTTCAAAGCTaGTTTTCGCCACCACAGGAA +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKCPFQS*FSPPQE
Trigger: TTCCTGTGGTGGCGAAAACAAGCTTTGAAATGGACA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAAAAAGTTTCTCTTGGTaGCCCTGGTGTGGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTKSFSW*PWCGSN
Trigger: ATTGGAACCACACCAGGGCAACCAAGAGAAACTTTT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCACATCTGTTGTGTTaGTTCTCTTGGGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSHLLC*FSWDAD
Trigger: GTCAGCATCCCAAGAGAACAAACACAACAGATGTGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAATCTCCTAAGGGCTACTaGCGTACTAAAGGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKSPKGY*RTKGSF
Trigger: AAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGA...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTTCTCCTAAGGGCTACTaGCGTACTAAAGGTTCGTTT +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLSPKGY*RTKGSF
Trigger: AAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGA...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp ATCACTGCCATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATCTCTTGAGAATGGAGTaGATAATGTTGAGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: ITAIASFRSEGLGVIHCYLLRME*IMLSEV
Trigger: TACCTCACTCAACATTATCAACTCCATTCTCAAGAG...ATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTATGGCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp GCACATTCTGGAGAAAAGCTTTGCCGCACTGAAAACATTCAAAGTAGTCCTCCTAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: AHSGEKLCRTENIQSSPPRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...AGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCTTTTCTCCAGAATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGTTGTCGTCTTCTGGTaGGTACATCTCCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKVVVFW*VHLLVI
Trigger: AATTACAAGGAGATGTACCAACCAGAAGACGACAAC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp ATTCAAAGTAGTCCTCCTGACTGTGAATTCTTACACGTTCACAGAGATTCGCACGTTGTCGTCTTCTGGTaGGTACATCTCCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: IQSSPPDCEFLHVHRDSHVVVFW*VHLLVI
Trigger: AATTACAAGGAGATGTACCAACCAGAAGACGACAAC...GTGCGAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTGTTGTCGTCTTCTGGTaGGTACATCTCCTTGTAATT +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLVVVFW*VHLLVI
Trigger: AATTACAAGGAGATGTACCAACCAGAAGACGACAAC...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCACAATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: NVQVVNKVGLVKGLLTLTIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...TGTGAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp ATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACACTCATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: MNVQVVNKVGLVKGLLTLIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...GAGTGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CACACTTTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTAGGAAGCCAATAATGTaGAGAAAAGTGTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: HTLMNVQVVNKVGLVKGLRKPIM*RKVCAV
Trigger: CACAGCACACACTTTTCTCAACATTATTGGCTTCCT...AAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp CCTTCCTGGGGATCCTTTCCTAGAGGATCCTTTGATTGTTTACTAAGATTAGAGATCATGAGACTCTCCTaGACAAATCACTGTATGTCT +
Preference number: 5 (lower is better)
Translates to: PSWGSFPRGSFDCLLRLEIMRLS*TNHCMS
Trigger: AGACATACAGTGATTTGTCAAGGAGAGTCTCATGAT...CTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAAAGGATCCCCAGGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp ATAGCTTCTTTCCGGAGTGAGGGTCTTGGGGTCATTCATTGTTATAGGAGTCAAGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: IASFRSEGLGVIHCYRSQVLKVR*QNSHLL
Trigger: CAACAGATGTGAATTTTGCAAACGAACCTTTAGTAC...TTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAAAGAAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595671.5
ENST00000597281.5
ENST00000650111.1
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAACTCTTGAGAATGGAGTaGATAATGTTGAGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKLLRME*IMLSEV
Trigger: TACCTCACTCAACATTATCAACTCCATTCTCAAGAG...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp AAGGCCTTCTCACACTCACAACACTCTAGGAGGAAGCCAATAATGTTGAGAAAAGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: KAFSHSQHSRRKPIMLRKVLKVR*QNSHLL
Trigger: CAACAGATGTGAATTTTGCAAACGAACCTTTAGTAC...TTTTCTCAACATTATTGGCTTCCTCCTAGAGTGTTGTGAGTGTGAGAAGGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
CDS-3UTR CAA 90 bp TTGATGAATGTTCAAGTTGTTAACAAGGTGGGGCTAGTGAAAGGCCTTCTCACAGTACTAAAGGTTCGTTaGCAAAATTCACATCTGTTG +
Preference number: 5 (lower is better)
Translates to: LMNVQVVNKVGLVKGLLTVLKVR*QNSHLL
Trigger: CAACAGATGTGAATTTTGCAAACGAACCTTTAGTAC...TGTGAGAAGGCCTTTCACTAGCCCCACCTTGTTAACAACTTGAACATTCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593711.6
ENST00000629319.2
CDS CCA 72 bp GCTTCTTGGGTTCCTGGTGTGGGACCAGCGGTCTCGTaGCTCCATGTCTCTGCTTCTGCCCCTCCGGTCCCA +
Preference number: 6 (lower is better)
Translates to: ASWVPGVGPAVS*LHVSASAPPVP
Trigger: TGGGACCGGAGGGGCAGAAGCAGAGACATGGAGCCACGAGACCGCTGGTCCCACACCAGGAACCCAAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000593711.6
ENST00000593931.1
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
ENST00000650111.1
CDS CCA 72 bp AAAGATCCCGCGGAGGCATCCTGCTTCTTGGGTTCCTaGTGTGGGACCAGCGGTCTCGTGGCTCCATGTCTC +
Preference number: 6 (lower is better)
Translates to: KDPAEASCFLGS*CGTSGLVAPCL
Trigger: GAGACATGGAGCCACGAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTCCGCGGGATCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
ENST00000650111.1
CDS CCA 72 bp TTGGATCTTGATGAGTGGCCCTGCGTCATGTGGGAGTaGCCATCGTCTTCAGCAAGCTGCACTCCGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LDLDEWPCVMWE*PSSSASCTPRE
Trigger: CTCCCTCGGAGTGCAGCTTGCTGAAGACGATGGCCACTCCCACATGACGCAGGGCCACTCATCAAGATCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595671.5
CDS CAA 90 bp CATAAGCCCTGGAGTCCCTGTCGTCCTCTCTGTCCATTTCAAAGCTaGTTTTCGCCACCACAGGAAGGGAAAGATCCCGCGGAGGCATCC +
Preference number: 6 (lower is better)
Translates to: HKPWSPCRPLCPFQS*FSPPQEGKDPAEAS
Trigger: GGATGCCTCCGCGGGATCTTTCCCTTCCTGTGGTGGCGAAAACAAGCTTTGAAATGGACAGAGAGGACGACAGGGACTCCAGGGCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000593711.6
ENST00000595671.5
ENST00000597281.5
ENST00000599935.5
ENST00000601070.5
ENST00000629319.2
ENST00000650111.1
CDS CCA 72 bp TGCGGGTCTCCGGCTGTCTGGGAACAGGATCCTTTCTaGAACTTCAGACCAAGCAGCTATCCACAGGAACAG +
Preference number: 6 (lower is better)
Translates to: CGSPAVWEQDPF*NFRPSSYPQEQ
Trigger: CTGTTCCTGTGGATAGCTGCTTGGTCTGAAGTTCCAGAAAGGATCCTGTTCCCAGACAGCCGGAGACCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597281.5
ENST00000601070.5
CDS CAA 72 bp TCCGGCTGCAACCAATCGAGGCAGAGGTTTCGGAGTTaGATCAGGGTCTTCCGAGGCCCAACAAATTCCACA +
Preference number: 6 (lower is better)
Translates to: SGCNQSRQRFRS*IRVFRGPTNST
Trigger: TGTGGAATTTGTTGGGCCTCGGAAGACCCTGATCAAACTCCGAAACCTCTGCCTCGATTGGTTGCAGCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000599935.5
ENST00000629319.2
ENST00000650111.1
CDS CCA 72 bp GGTTCCGAAACCTCTGTCTGGGAACAGGATCCTTTCTaGAACTTCAGACCAAGCAGCTATCCACAGGAACAG +
Preference number: 6 (lower is better)
Translates to: GSETSVWEQDPF*NFRPSSYPQEQ
Trigger: CTGTTCCTGTGGATAGCTGCTTGGTCTGAAGTTCCAGAAAGGATCCTGTTCCCAGACAGAGGTTTCGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599935.5
ENST00000629319.2
CDS CCA 72 bp AGTACTCAGGGACCTGTCTGGGAACAGGATCCTTTCTaGAACTTCAGACCAAGCAGCTATCCACAGGAACAG +
Preference number: 6 (lower is better)
Translates to: STQGPVWEQDPF*NFRPSSYPQEQ
Trigger: CTGTTCCTGTGGATAGCTGCTTGGTCTGAAGTTCCAGAAAGGATCCTGTTCCCAGACAGGTCCCTGAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650111.1
CDS CAA 90 bp TCACTGTCTAGCTCATACAGATTTGGGGCCCAGGACTTCTTAGGTTaGGTGGCAGACAAGTGCTTTGGAGGCAGCATTTCTCTAAGTAAA +
Preference number: 6 (lower is better)
Translates to: SLSSSYRFGAQDFLG*VADKCFGGSISLSK
Trigger: TTTACTTAGAGAAATGCTGCCTCCAAAGCACTTGTCTGCCACCAAACCTAAGAAGTCCTGGGCCCCAAATCTGTATGAGCTAGACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650111.1