Pregenerated sensors for ZIC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000156925Ensembl transcript IDs: ENST00000287538.10, ENST00000370606.3
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAAAGTTCAAGACATAACAGGACTTTGGCACGGTTTAAGACTGTaGGAGTTTAAACAATCACCACTAAGGCGAAAAAGAATTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: GKVQDITGLWHGLRL*EFKQSPLRRKRISI Trigger: GATGGAAATTCTTTTTCGCCTTAGTGGTGATTGTTTAAACTCTCACAGTCTTAAACCGTGCCAAAGTCCTGTTATGTCTTGAACTTTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR-3UTR GCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGCTACTTTTGGATCTTaGCCAAAACCTTCCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: TITTKAKKNFHQFNITTTATFGS*PKPSWT Trigger: TGTCCAGGAAGGTTTTGGGCAAGATCCAAAAGTAGC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCCTGAGAAAAGGGCATaGCTACTTTTGGATCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SRLPYVYICRAGMIKSSFPEKRA*LLLDLA Trigger: GGCAAGATCCAAAAGTAGCCATGCCCTTTTCTCAGG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR-3UTR TCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCAACTCCATTTCCATCTaGTTGGTCTCAGTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TITTKAKKNFHQFNITTTNSISI*LVSVFF Trigger: AAAGAAAACTGAGACCAATCAGATGGAAATGGAGTT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR CAA 90 bp | AGTTTCGACCCTATTAGACAAAAATACATTCACAAGTGTAATGCTTaGAGGAAAAGTTCAAGACATAACAGGACTTTGGCACGGTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: SFDPIRQKYIHKCNA*RKSSRHNRTLARFK Trigger: CTTAAACCGTGCCAAAGTCCTGTTATGTCTTGAACTTTTCCTCAAAGCATTACACTTGTGAATGTATTTTTGTCTAATAGGGTCGAAACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAAGATTGAGATGTCATaGCCACTAACTGAATTGATC | + |
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Preference number: 2 (lower is better) Translates to: SRLPYVYICRAGMIKSSFKIEMS*PLTELI Trigger: GATCAATTCAGTTAGTGGCCATGACATCTCAATCTT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR-3UTR CAA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAGGGCATGGCTACTTTaGGATCTTGCCCAAAACCTT | + |
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Preference number: 3 (lower is better) Translates to: SRLPYVYICRAGMIKSSFRAWLL*DLAQNL Trigger: AAGGTTTTGGGCAAGATCCAAAAGTAGCCATGCCCT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR-3UTR CAA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAGACATAACAGGACTTaGGCACGGTTTAAGACTGTG | + |
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Preference number: 3 (lower is better) Translates to: SRLPYVYICRAGMIKSSFRHNRT*ARFKTV Trigger: CACAGTCTTAAACCGTGCCAAAGTCCTGTTATGTCT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR TCA 72 bp | CAAGACATAACAGGACTTTGGCACGGTTTAAGACTGTaGGAGTTTAAACAATCACCACTAAGGCGAAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: QDITGLWHGLRL*EFKQSPLRRKR Trigger: TCTTTTTCGCCTTAGTGGTGATTGTTTAAACTCTCACAGTCTTAAACCGTGCCAAAGTCCTGTTATGTCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR GCA 72 bp | AATACCAAATTGACTGCCACCAAAAACCTAGAGCATTaGCCCTTAAAGGAGGTACTTAAGCCTATTCAATAC | + |
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Preference number: 3 (lower is better) Translates to: NTKLTATKNLEH*PLKEVLKPIQY Trigger: GTATTGAATAGGCTTAAGTACCTCCTTTAAGGGGCAATGCTCTAGGTTTTTGGTGGCAGTCAATTTGGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR TCA 72 bp | GTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATaGTTAAATCCAGCTTCTCAGTCTTTGAAGTACAAG | + |
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Preference number: 3 (lower is better) Translates to: VGYLMFIYVGQG*LNPASQSLKYK Trigger: CTTGTACTTCAAAGACTGAGAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCCGGCAGGGCTCAGCTTaGAGGCAGCGGCGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTRQGSA*RQRRRR Trigger: CCGCCGCCGCCGCTGCCTTCAAGCTGAGCCCTGCCG...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGGCGGCGCGCCGAAGCTaGCCACTCCCAGCCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLAARRS*PLPAQG Trigger: TCCCTGGGCTGGGAGTGGGCAGCTTCGGCGCGCCGC...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGGCCAGGAGGCTCCCTaGGTACCGGCCTCCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTGQEAP*VPASGL Trigger: CAGCCCGGAGGCCGGTACCCAGGGAGCCTCCTGGCC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGGCGGCGGCGGCGGCGTaGGTTGAGTCCCCGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLAAAAA*VESPKG Trigger: TCCCTTCGGGGACTCAACCCACGCCGCCGCCGCCGC...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGCGGCGGTTGGACACTaGGGGGAGACCCCCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTAAVGH*GETPKA Trigger: CGCCTTGGGGGTCTCCCCGCAGTGTCCAACCGCCGC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCCAGCCCAGGGAACTaGGGGCCTCCGTCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPSPGN*GPPSRS Trigger: GCTCCTGGACGGAGGCCCGCAGTTCCCTGGGCTGGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCTGTGGGCGACGGGTaGCCAGCGCCCTGCTCATGC | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPVGDG*PAPCSC Trigger: GCATGAGCAGGGCGCTGGGCACCCGTCGCCCACAGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCAGGGGTGGCGGCGGTTaGACACTGCGGGGAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTRGGGG*TLRGDP Trigger: GGGGTCTCCCCGCAGTGTCCAACCGCCGCCACCCCT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCTGTCCACGTGCCCTGTaGGCGACGGGTGCCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTCPRAL*ATGAQR Trigger: GCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACA...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGGCGCGGGCTGGCCACTaGGCGGTATGGGTCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLARAGH*AVWVST Trigger: CGTGCTGACCCATACCGCCCAGTGGCCAGCCCGCGC...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGGTCCGTGCGCGGGCTaGCCACTGGGCGGTATGGGT | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTGPCAG*PLGGMG Trigger: ACCCATACCGCCCAGTGGCCAGCCCGCGCACGGACC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGAAGGCGCCGGGCCCGTaGTGGGCCGCCACGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLKAPGP*WAATFT Trigger: AGTGAACGTGGCGGCCCACCACGGGCCCGGCGCCTT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCCCGAACCCTGCGGCGTaGAAGCCGAGCTCTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTPNPAA*KPSSGL Trigger: CAGGCCAGAGCTCGGCTTTCACGCCGCAGGGTTCGG...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGTCGTTACTCGCCGCTTaGCGCTCGCCGCGCGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLSLLAA*RSPRES Trigger: GGACTCGCGCGGCGAGCGGCAAGCGGCGAGTAACGA...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCTCCTCTCCCCGAGTaGACAGAACCGCGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPPLPE*TEPRGQ Trigger: CTGGCCCCGCGGTTCTGTGCACTCGGGGAGAGGAGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCTGGGCTGCGCCAAGTaGCGGAGCCGGCTAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFLGCAK*RSRLAA Trigger: GGCCGCTAGCCGGCTCCGCCACTTGGCGCAGCCCAG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCTTGGGCATCTCGTGGTaGCGCGGCGCGCCGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTLGISW*RGAPKL Trigger: CAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAA...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCTGCCGGCTCACGGTTaGGCATCTCGTGGTGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLLPAHG*ASRGGA Trigger: CGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGGCGATCCGGCCGAAGTaGGAGAGGGTACCGGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLAIRPK*ERVPAK Trigger: CTTCGCCGGTACCCTCTCTCACTTCGGCCGGATCGC...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCACTCGCGCGTTGAGTTaGAGGCGGCAGAGGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTTRALS*RRQRQR Trigger: GCGCTGCCTCTGCCGCCTTCAACTCAACGCGCGAGT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCTGGAGCATGCAGGCTaGTCGCCGAGCCGGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLLEHAG*SPSRRR Trigger: TCTTCGCCGGCTCGGCGAGCAGCCTGCATGCTCCAG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTACCGGCCTCCGGGCTaGGCTGCGCCAAGTGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFYRPPG*AAPSGG Trigger: TCCGCCACTTGGCGCAGCCCAGCCCGGAGGCCGGTA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCATGGGTGGGACGTTCTaGGCACAGGCGATCCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTMGGTF*AQAIRP Trigger: CGGCCGGATCGCCTGTGCCCAGAACGTCCCACCCAT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCGGTTGGGCATCTCGTaGTGGCGCGGCGCGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFRLGIS*WRGAPK Trigger: CTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGGTGGCCCAGGGCGTTaGCGTAGCCCGAACCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFGGPGR*RSPNPA Trigger: CGCAGGGTTCGGGCTACGCCAACGCCCTGGGCCACC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCAGCGCCACCGTAGCTaGGCACCTGGCTGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLQRHRS*APGWCG Trigger: ACCACACCAGCCAGGTGCCCAGCTACGGTGGCGCTG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCAGCCCGGAGCTGCGCTaGCGGAACAGAAACTCGCGC | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTSPELR*RNRNSR Trigger: GCGCGAGTTTCTGTTCCGCCAGCGCAGCTCCGGGCT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGGCGGCGGCGTGGGTTaGGTCCCCGAAGGGATTCAG | + |
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Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFGGGVG*VPEGIQ Trigger: CTGAATCCCTTCGGGGACTCAACCCACGCCGCCGCC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGTGGAGGGCGGAGTTTaGCAATCCTGTCCCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTVEGGV*QSCPGH Trigger: GTGCCCGGGACAGGATTGGCAAACTCCGCCCTCCAC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCAGCGCCCTGCTCATaGAGCCCGGGAAACAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPAPCS*SPGNSK Trigger: CTTGCTGTTTCCCGGGCTGCATGAGCAGGGCGCTGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGGGTGCCCAGCGCCCTaGTCATGCAGCCCGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFGCPAP*SCSPGN Trigger: GTTTCCCGGGCTGCATGAGCAGGGCGCTGGGCACCC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGTAGTCGGAAAGGGGTaGCGGCGGTTGGACACTGCG | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTVVGKG*RRLDTA Trigger: CGCAGTGTCCAACCGCCGCCACCCCTTTCCGACTAC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCACGCAGCCCCAGGTaGACCTGGTTGTTGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPRSPR*TWLLST Trigger: CGTGGACAACAACCAGGTCCACCTGGGGCTGCGTGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGGTCGCAGCTCTTCTTaGGCCGGCTCAGCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTGRSSS*AGSAEP Trigger: AGGCTCAGCTGAGCCGGCCCAAGAAGAGCTGCGACC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGCTCATGCATGGTGCTaGAGGTCCGGTCGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTAHAWC*RSGRSS Trigger: AGAGCTGCGACCGGACCTTCAGCACCATGCATGAGC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGATTCAGCCCCATGCCTaGCGGCTCACGGTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLIQPHA*RLTVGH Trigger: ATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAAT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCATGCCAGCTGGAGCATaGAGGCTGCTCGCCGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFMPAGA*RLLAEP Trigger: CGGCTCGGCGAGCAGCCTGCATGCTCCAGCTGGCAT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGAGCATCGTCATGGGTaGGACGTTCTGGGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTEHRHG*DVLGTG Trigger: GCCTGTGCCCAGAACGTCCCACCCATGACGATGCTC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCCCAGGAGCATCGTCATaGGTGGGACGTTCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTPGASS*VGRSGH Trigger: GTGCCCAGAACGTCCCACCCATGACGATGCTCCTGG...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGGCCACTGGGCGGTATaGGTCAGCACGGCCGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFGHWAV*VSTAEQ Trigger: CTGTTCGGCCGTGCTGACCCATACCGCCCAGTGGCC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTTGGGCCGGCTCAGCTaGGCCTCGTCGATCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFLGRLS*ASSIHL Trigger: CAAGTGGATCGACGAGGCTCAGCTGAGCCGGCCCAA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAGGGATTCAGCCCCATaGCTGCCGGCTCACGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFRDSAP*LPAHGW Trigger: CCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCCTGAAGATAGATCGTaGGCCGCGGCAGGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFPEDRS*AAAGLS Trigger: GCTGAGCCCTGCCGCGGCGCACGATCTATCTTCAGG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTGGTTGTTGTCCACGTaGCCTGTGGGCGACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFWLLST*PVGDGC Trigger: GCACCCGTCGCCCACAGGGCACGTGGACAACAACCA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCAGAAACTCGCGCGTTaGGTTGAAGGCGGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFQKLAR*VEGGRG Trigger: GCCTCTGCCGCCTTCAACTCAACGCGCGAGTTTCTG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR TCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGGTTTGTACTTCGCCTTaGAAGACTTGCCCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLVCTSP*KTCPPG Trigger: CCCGGGAGGGCAAGTCTTTCAAGGCGAAGTACAAAC...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGACTGCAAGAGTCTCCTaGAGAGGGATAGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLTARVS*RGIGGR Trigger: CCTCCCTCCTATCCCTCTGCAGGAGACTCTTGCAGT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGGCGCTACCAGGGGCTaGAACTTTCCGTCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFGATRG*NFPSLQ Trigger: TTGCAGTGACGGAAAGTTGCAGCCCCTGGTAGCGCC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGGAAGATTCATAGCCTaGACTGGCAGCAGGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFGRFIA*TGSRGG Trigger: TCCTCCCCTGCTGCCAGTTCAGGCTATGAATCTTCC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAGGAGATCTCCGAAGTaGCGTAGTCGGAAAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFRRSPK*RSRKGV Trigger: CACCCCTTTCCGACTACGGCACTTCGGAGATCTCCT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCCACATGCTCCATGGTaGCATGTGTCACCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFPHAPW*HVSPAH Trigger: ATGAGCTGGTGACACATGTCACCATGGAGCATGTGG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGCAACTTTCCGTCACTaGAAGAGTCTCCTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFATFRH*KSLLQR Trigger: CCTCTGCAGGAGACTCTTGCAGTGACGGAAAGTTGC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGTGAAAGCCGAGCTCTaGCCTGAAGATAGATCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFVKAEL*PEDRSC Trigger: GCACGATCTATCTTCAGGCCAGAGCTCGGCTTTCAC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCTGAGAAAAGGGCATaGCTACTTTTGGATCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPEKRA*LLLDLA Trigger: GGCAAGATCCAAAAGTAGCCATGCCCTTTTCTCAGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTCCGAGGTATGCACATaGATGTGCTTCTTACGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFSEVCT*MCFLRS Trigger: CGACCGTAAGAAGCACATGCATGTGCATACCTCGGA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGGTATCTTTACTGTTTaGAGAAGCTATAGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTGIFTV*RSYSGW Trigger: CCACCCGCTATAGCTTCTGCAAACAGTAAAGATACC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGGCTACTTTTGGATCTTaGCCAAAACCTTCCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLATFGS*PKPSWT Trigger: TGTCCAGGAAGGTTTTGGGCAAGATCCAAAAGTAGC...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| 3UTR CAA 72 bp | CTACTTTTGGATCTTGCCCAAAACCTTCCTGGACAATaGCAATTAACAAGATGTAGCCCTATATATGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLDLAQNLPGQ*QLTRCSPIYGL Trigger: GAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTTTTGGGCAAGATCCAAAAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTGGCTGGTGCTAGTTTaGACTGCAGAAGGGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFWLVLV*TAEGVL Trigger: TAAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAGAAGCTATAGCGGGTaGAGTGGAAGATTCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFRSYSG*SGRFIA Trigger: GGCTATGAATCTTCCACTCCACCCGCTATAGCTTCT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGTTTGAAGTACAAGATTaGGATGTCATGGCCACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLFEVQD*DVMATN Trigger: GTTAGTGGCCATGACATCTCAATCTTGTACTTCAAA...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTATGTAGGGCAGGGATaGTTAAATCCAGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFYVGQG*LNPASQ Trigger: CTGAGAAGCTGGATTTAATCATCCCTGCCCTACATA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGAAAAACCTAGAGCATTaGCCCTTAAAGGAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLKNLEH*PLKEVL Trigger: AAGTACCTCCTTTAAGGGGCAATGCTCTAGGTTTTT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCTTCCCAGATGGAAACTaGCACTGTAAGGAATTTATA | + |
|
Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTFPDGN*HCKEFI Trigger: TATAAATTCCTTACAGTGTCAGTTTCCATCTGGGAA...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGAACTGTTTGTCCAAATaGGTTGCTTCACTGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLNCLSK*VASLKI Trigger: AATCTTCAGTGAAGCAACTCATTTGGACAAACAGTT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCCTATATATGGCCTCTTaGCTTAAAACTCCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TITTKAKKNFHQFNITTTLYMAS*LKTPFP Trigger: TGGAAATGGAGTTTTAAGGCAAGAGGCCATATATAG...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGGACAGACATGCATCCTaGCGCAATTTTCATTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLDRHAS*RNFHFY Trigger: ATAAAAATGAAAATTGCGGCAGGATGCATGTCTGTC...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAAGCAAAATAGTAAGTaGAGGGCGGAGTTTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFKQNSK*RAEFAN Trigger: ATTGGCAAACTCCGCCCTCCACTTACTATTTTGCTT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGAAGATTGAGATGTCATaGCCACTAACTGAATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLKIEMS*PLTELI Trigger: GATCAATTCAGTTAGTGGCCATGACATCTCAATCTT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCACGGTTTAAGACTGTaGGAGTTTAAACAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFHGLRL*EFKQSP Trigger: TGGTGATTGTTTAAACTCTCACAGTCTTAAACCGTG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR GCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCACCATAAGTAAGCAATaGTCAACTGGCCTTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFTISKQ*STGLTH Trigger: ATGAGTAAGGCCAGTTGAGCATTGCTTACTTATGGT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTGCCCAAAACCTTCCTaGACAATTGCAATTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFCPKPS*TIAINK Trigger: CTTGTTAATTGCAATTGTCCAGGAAGGTTTTGGGCA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR TCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAACTCCATTTCCATCTaGTTGGTCTCAGTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFNSISI*LVSVFF Trigger: AAAGAAAACTGAGACCAATCAGATGGAAATGGAGTT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR CCA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCTATTCATGCAGAGATTaGGCTCTCAATAACAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SRLPYVYICRAGMIKSSFYSCRD*ALNNKQ Trigger: CTGTTTGTTATTGAGAGCCCAATCTCTGCATGAATA...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS GCA 90 bp | GCTGGAGCATGCAGGCTGCTCGCCGAGCCGGCGAAGAGCCCGTGCTaGCCGCCACCCGAGGCCGCCTCACTGAGCCCGGAGCTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGACRLLAEPAKSPC*PPPEAASLSPELRW Trigger: CCAGCGCAGCTCCGGGCTCAGTGAGGCGGCCTCGGGTGGCGGGCAGCACGGGCTCTTCGCCGGCTCGGCGAGCAGCCTGCATGCTCCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 90 bp | CGGCGGCGGCGGCGTGGGTTGAGTCCCCGAAGGGATTCAGCCCCATaGCTGCCGGCTCACGGTTGGGCATCTCGTGGTGGCGCGGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RRRRRGLSPRRDSAP*LPAHGWASRGGAAR Trigger: GCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAACCCACGCCGCCGCCGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CCA 90 bp | GGGCTCAGCTTGAAGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGTaGGTTGAGTCCCCGAAGGGATTCAGCCCCATGCCTGCCGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLSLKAAAAAAAAAA*VESPKGFSPMPAGS Trigger: TGAGCCGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAACCCACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCTTCAAGCTGAGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS TCA 90 bp | CAGCTTGAAGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGTGGGTTaGGTCCCCGAAGGGATTCAGCCCCATGCCTGCCGGCTCACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QLEGSGGGGGGGGVG*VPEGIQPHACRLTV Trigger: AACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAACCCACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCTTCAAGCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS TCA 90 bp | AGCTCTGGCCTGAAGATAGATCGTGCGCCGCGGCAGGGCTCAGCTTaGAGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGTGGGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGLKIDRAPRQGSA*RQRRRRRRRRRGLS Trigger: ACTCAACCCACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCTTCAAGCTGAGCCCTGCCGCGGCGCACGATCTATCTTCAGGCCAGAGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CCA 90 bp | GGATTCAGCCCCATGCCTGCCGGCTCACGGTTGGGCATCTCGTGGTaGCGCGGCGCGCCGAAGCTGCCCACTCCCAGCCCAGGGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GFSPMPAGSRLGISW*RGAPKLPTPSPGNC Trigger: GCAGTTCCCTGGGCTGGGAGTGGGCAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 90 bp | AAGGGATTCAGCCCCATGCCTGCCGGCTCACGGTTGGGCATCTCGTaGTGGCGCGGCGCGCCGAAGCTGCCCACTCCCAGCCCAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KGFSPMPAGSRLGIS*WRGAPKLPTPSPGN Trigger: GTTCCCTGGGCTGGGAGTGGGCAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 90 bp | CCCCACGCAGCCCCAGGTGGACCTGGTTGTTGTCCACGTGCCCTGTaGGCGACGGGTGCCCAGCGCCCTGCTCATGCAGCCCGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PHAAPGGPGCCPRAL*ATGAQRPAHAARET Trigger: TGTTTCCCGGGCTGCATGAGCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCACCTGGGGCTGCGTGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 90 bp | TTGAGTCCCCGAAGGGATTCAGCCCCATGCCTGCCGGCTCACGGTTaGGCATCTCGTGGTGGCGCGGCGCGCCGAAGCTGCCCACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPRRDSAPCLPAHG*ASRGGAARRSCPLP Trigger: TGGGAGTGGGCAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 90 bp | CAGCCCGGGAAACAGCAAGTAGCTAGGGGGCTCGGGGATGCCAGCTaGAGCATGCAGGCTGCTCGCCGAGCCGGCGAAGAGCCCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPGKQQVARGLGDAS*SMQAARRAGEEPVL Trigger: CAGCACGGGCTCTTCGCCGGCTCGGCGAGCAGCCTGCATGCTCCAGCTGGCATCCCCGAGCCCCCTAGCTACTTGCTGTTTCCCGGGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 90 bp | CGGTATGGGTCAGCACGGCCGAACAGCTCCCCACGCAGCCCCAGGTaGACCTGGTTGTTGTCCACGTGCCCTGTGGGCGACGGGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RYGSARPNSSPRSPR*TWLLSTCPVGDGCP Trigger: TGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCACCTGGGGCTGCGTGGGGAGCTGTTCGGCCGTGCTGACCCATACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 90 bp | GGCCGAAGTGAGAGAGGGTACCGGCGAAGGAGGAGATCTCCGAAGTaGCGTAGTCGGAAAGGGGTGGCGGCGGTTGGACACTGCGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRSERGYRRRRRSPK*RSRKGVAAVGHCGE Trigger: CTCCCCGCAGTGTCCAACCGCCGCCACCCCTTTCCGACTACGGCACTTCGGAGATCTCCTCCTTCGCCGGTACCCTCTCTCACTTCGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 90 bp | AGGCGCTACCAGGGGCTGCAACTTTCCGTCACTGCAAGAGTCTCCTaGAGAGGGATAGGAGGGAGGAGGGGAAGAAAGAGCAGGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRYQGLQLSVTARVS*RGIGGRRGRKSREG Trigger: CCCCTCCCTGCTCTTTCTTCCCCTCCTCCCTCCTATCCCTCTGCAGGAGACTCTTGCAGTGACGGAAAGTTGCAGCCCCTGGTAGCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCCTCGTTACTCGCCGCTaGCCGCTCGCCGCGCGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTLVTRR*PLAARV Trigger: GACTCGCGCGGCGAGCGGCAAGCGGCGAGTAACGAG...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCTGCCGGCTCACGGTaGGGCATCTCGTGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPAGSR*GISWWR Trigger: GCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCGCGGCAGGGCTCAGCTaGAAGGCAGCGGCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRLPYVYICRAGMIKSSFAAGLS*KAAAAA Trigger: CGCCGCCGCCGCTGCCTTCAAGCTGAGCCCTGCCGC...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCAAGGGGTGGCGGCGGTaGGACACTGCGGGGAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPYVYICRAGMIKSSFKGWRR*DTAGRP Trigger: GGGTCTCCCCGCAGTGTCCAACCGCCGCCACCCCTT...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCAGTGGAGGGCGGAGTTaGCCAATCCTGTCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTSGGRS*PILSRA Trigger: TGCCCGGGACAGGATTGGCAAACTCCGCCCTCCACT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCGGCGGCGGCGTGGGTaGAGTCCCCGAAGGGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRLPYVYICRAGMIKSSFRRRRG*SPRRDS Trigger: TGAATCCCTTCGGGGACTCAACCCACGCCGCCGCCG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGAACTCGCGCGTTGAGTaGAAGGCGGCAGAGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLNSRVE*KAAEAA Trigger: CGCTGCCTCTGCCGCCTTCAACTCAACGCGCGAGTT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCAGGTGGACCTGGTTGTaGTCCACGTGCCCTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTRWTWL*STCPVG Trigger: GCCCACAGGGCACGTGGACAACAACCAGGTCCACCT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS-3UTR CAA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCCCAGGTGGACCTGGTaGTTGTCCACGTGCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLPRWTW*LSTCPV Trigger: CACAGGGCACGTGGACAACAACCAGGTCCACCTGGG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGTTCGCCTTGAAAGACTaGCCCTCCCGGGGGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLFALKD*PSRGHS Trigger: GGAGTGCCCCCGGGAGGGCAAGTCTTTCAAGGCGAA...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGCCTCGTCGATCCACTaGCACGACAGCTCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTASSIH*HDSSCL Trigger: CAAGCAGGAGCTGTCGTGCAAGTGGATCGACGAGGC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS CCA 90 bp | TTCGGCATTAACCCTGCATTTAGGATAGGTAGTGTTATGGAGGGCTaGCTGCTGCATACCAACGTCAGTATCAAGTTCTTCGTCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FGINPAFRIGSVMEG*LLHTNVSIKFFVRN Trigger: ATTCCTGACGAAGAACTTGATACTGACGTTGGTATGCAGCAGCCAGCCCTCCATAACACTACCTATCCTAAATGCAGGGTTAATGCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370606.3 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCAGTTTGTACTTCGCCTaGAAAGACTTGCCCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTSLYFA*KDLPSR Trigger: CCGGGAGGGCAAGTCTTTCAAGGCGAAGTACAAACT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGTGGCTGGTGCTAGTTaGAACTGCAGAAGGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTVAGAS*NCRRGF Trigger: AAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCAC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCGGCTACTTTTGGATCTaGCCCAAAACCTTCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTGYFWI*PKTFLD Trigger: GTCCAGGAAGGTTTTGGGCAAGATCCAAAAGTAGCC...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGAGGGCATGGCTACTTTaGGATCTTGCCCAAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLRAWLL*DLAQNL Trigger: AAGGTTTTGGGCAAGATCCAAAAGTAGCCATGCCCT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGAGACATAACAGGACTTaGGCACGGTTTAAGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLRHNRT*ARFKTV Trigger: CACAGTCTTAAACCGTGCCAAAGTCCTGTTATGTCT...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCAACCTTCCTGGACAATaGCAATTAACAAGATGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTNLPGQ*QLTRCS Trigger: GCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCAAAAACCTAGAGCATaGCCCCTTAAAGGAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SRLPYVYICRAGMIKSSFQKPRA*PLKGGT Trigger: AGTACCTCCTTTAAGGGGCAATGCTCTAGGTTTTTG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AACCTTCCTGGACAATTGCAATTAACAAGATGTAGCCCTATATATGGCCTCTTGCACAAGTGTAATGCTTaGAGGAAAAGTTCAAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: NLPGQLQLTRCSPIYGLLHKCNA*RKSSRH Trigger: ATGTCTTGAACTTTTCCTCAAAGCATTACACTTGTG...CAAGAGGCCATATATAGGGCTACATCTTGTTAATTGCAATTGTCCAGGAAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | ACAATCACCACTAAGGCGAAAAAGAATTTCCATCAGTTTAACATCACCACCACCTCAGTAATATTTGATTaGCATGCCGAAAATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TITTKAKKNFHQFNITTTSVIFD*HAENPG Trigger: TCCTGGATTTTCGGCATGCAAATCAAATATTACTGA...GGTGGTGGTGATGTTAAACTGATGGAAATTCTTTTTCGCCTTAGTGGTGATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS-3UTR CAA 90 bp | AGTAGGTTACCTTATGTTTATATATGTAGGGCAGGGATGATTAAATCCAGCTTCCCAGCTTCTCAGTCTTaGAAGTACAAGATTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SRLPYVYICRAGMIKSSFPASQS*KYKIEM Trigger: CATCTCAATCTTGTACTTCAAAGACTGAGAAGCTGG...GAAGCTGGATTTAATCATCCCTGCCCTACATATATAAACATAAGGTAACCTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS TCA 72 bp | GGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGTGGGTTaGGTCCCCGAAGGGATTCAGCCCCATGCCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGGGGGGGGVG*VPEGIQPHACR Trigger: CCGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAACCCACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 72 bp | CAGGAGGCTCCCTGGGTACCGGCCTCCGGGCTGGGCTaGGCCAAGTGGCGGAGCCGGCTAGCGGCCGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QEAPWVPASGLG*AKWRSRLAAGQ Trigger: CTGCCCGGCCGCTAGCCGGCTCCGCCACTTGGCGCAGCCCAGCCCGGAGGCCGGTACCCAGGGAGCCTCCTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS CAA 72 bp | AGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGTGGGTaGAGTCCCCGAAGGGATTCAGCCCCATGCCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RQRRRRRRRRRG*SPRRDSAPCLP Trigger: CGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAACCCACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 72 bp | TGCAGGCTGCTCGCCGAGCCGGCGAAGAGCCCGTGCTaGCCGCCACCCGAGGCCGCCTCACTGAGCCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CRLLAEPAKSPC*PPPEAASLSPE Trigger: CTCCGGGCTCAGTGAGGCGGCCTCGGGTGGCGGGCAGCACGGGCTCTTCGCCGGCTCGGCGAGCAGCCTGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CAA 72 bp | CCTGAAGATAGATCGTGCGCCGCGGCAGGGCTCAGCTaGAAGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PEDRSCAAAGLS*KAAAAAAAAAA Trigger: CGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCTTCAAGCTGAGCCCTGCCGCGGCGCACGATCTATCTTCAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS TCA 72 bp | CTGAAGATAGATCGTGCGCCGCGGCAGGGCTCAGCTTaGAGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LKIDRAPRQGSA*RQRRRRRRRRR Trigger: ACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCTTCAAGCTGAGCCCTGCCGCGGCGCACGATCTATCTTCAG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 72 bp | CCCGAGTGCACAGAACCGCGGGGCCAGGAGGCTCCCTaGGTACCGGCCTCCGGGCTGGGCTGCGCCAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PECTEPRGQEAP*VPASGLGCAKW Trigger: CCACTTGGCGCAGCCCAGCCCGGAGGCCGGTACCCAGGGAGCCTCCTGGCCCCGCGGTTCTGTGCACTCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS CCA 72 bp | CCCATGCCTGCCGGCTCACGGTTGGGCATCTCGTGGTaGCGCGGCGCGCCGAAGCTGCCCACTCCCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PMPAGSRLGISW*RGAPKLPTPSP Trigger: TGGGCTGGGAGTGGGCAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 72 bp | AGCCCCATGCCTGCCGGCTCACGGTTGGGCATCTCGTaGTGGCGCGGCGCGCCGAAGCTGCCCACTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPMPAGSRLGIS*WRGAPKLPTPS Trigger: GCTGGGAGTGGGCAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 72 bp | TTGAAGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGTaGGTTGAGTCCCCGAAGGGATTCAGCCCCATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LKAAAAAAAAAA*VESPKGFSPMP Trigger: AGGCATGGGGCTGAATCCCTTCGGGGACTCAACCCACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCTTCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CCA 72 bp | ACTGAGCGCCGGCCGCGTAGGGGTCCGTGCGCGGGCTaGCCACTGGGCGGTATGGGTCAGCACGGCCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: TERRPRRGPCAG*PLGGMGQHGRT Trigger: TGTTCGGCCGTGCTGACCCATACCGCCCAGTGGCCAGCCCGCGCACGGACCCCTACGCGGCCGGCGCTCAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CAA 90 bp | GAGCTCTGGCCTGAAGATAGATCGTGCGCCGCGGCAGGGCTCAGCTaGAAGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGTGGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ELWPEDRSCAAAGLS*KAAAAAAAAAAWVE Trigger: CTCAACCCACGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCTTCAAGCTGAGCCCTGCCGCGGCGCACGATCTATCTTCAGGCCAGAGCTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CAA 72 bp | GGGCAGCGGGCAGTAGGCAGGCTCGTTACTCGCCGCTaGCCGCTCGCCGCGCGAGTCCCAGCCTCTTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQRAVGRLVTRR*PLAARVPASSP Trigger: AGGCGAAGAGGCTGGGACTCGCGCGGCGAGCGGCAAGCGGCGAGTAACGAGCCTGCCTACTGCCCGCTGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000287538.10 |
||
| CDS GCA 72 bp | CCACGCAGCCCCAGGTGGACCTGGTTGTTGTCCACGTaGCCTGTGGGCGACGGGTGCCCAGCGCCCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRSPRWTWLLST*PVGDGCPAPCS Trigger: TGAGCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCACCTGGGGCTGCGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CCA 72 bp | CGAAGGGATTCAGCCCCATGCCTGCCGGCTCACGGTTaGGCATCTCGTGGTGGCGCGGCGCGCCGAAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRDSAPCLPAHG*ASRGGAARRSC Trigger: GCAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CCA 72 bp | GCCCCAGGTGGACCTGGTTGTTGTCCACGTGCCCTGTaGGCGACGGGTGCCCAGCGCCCTGCTCATGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: APGGPGCCPRAL*ATGAQRPAHAA Trigger: GGCTGCATGAGCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGTCCACCTGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CAA 72 bp | CCGAAGGGATTCAGCCCCATGCCTGCCGGCTCACGGTaGGGCATCTCGTGGTGGCGCGGCGCGCCGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PKGFSPMPAGSR*GISWWRGAPKL Trigger: CAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
||
| CDS CAA 90 bp | GTTGAGTCCCCGAAGGGATTCAGCCCCATGCCTGCCGGCTCACGGTaGGGCATCTCGTGGTGGCGCGGCGCGCCGAAGCTGCCCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: VESPKGFSPMPAGSR*GISWWRGAPKLPTP Trigger: GGGAGTGGGCAGCTTCGGCGCGCCGCGCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 72 bp | CGGCGTGGGTTGAGTCCCCGAAGGGATTCAGCCCCATaGCTGCCGGCTCACGGTTGGGCATCTCGTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RRGLSPRRDSAP*LPAHGWASRGG Trigger: GCCACCACGAGATGCCCAACCGTGAGCCGGCAGGCATGGGGCTGAATCCCTTCGGGGACTCAACCCACGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 72 bp | ACCTGGTTGTTGTCCACGTGCCCTGTGGGCGACGGGTaGCCAGCGCCCTGCTCATGCAGCCCGGGAAACAGC | + |
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Preference number: 6 (lower is better) Translates to: TWLLSTCPVGDG*PAPCSCSPGNS Trigger: GCTGTTTCCCGGGCTGCATGAGCAGGGCGCTGGGCACCCGTCGCCCACAGGGCACGTGGACAACAACCAGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 72 bp | AAACAGCAAGTAGCTAGGGGGCTCGGGGATGCCAGCTaGAGCATGCAGGCTGCTCGCCGAGCCGGCGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: KQQVARGLGDAS*SMQAARRAGEE Trigger: CTCTTCGCCGGCTCGGCGAGCAGCCTGCATGCTCCAGCTGGCATCCCCGAGCCCCCTAGCTACTTGCTGTTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 72 bp | GAGAGAGGGTACCGGCGAAGGAGGAGATCTCCGAAGTaGCGTAGTCGGAAAGGGGTGGCGGCGGTTGGACAC | + |
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Preference number: 6 (lower is better) Translates to: ERGYRRRRRSPK*RSRKGVAAVGH Trigger: GTGTCCAACCGCCGCCACCCCTTTCCGACTACGGCACTTCGGAGATCTCCTCCTTCGCCGGTACCCTCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS CCA 72 bp | CGGCAGAGGCAGCGCCACCGTAGCTGGGCACCTGGCTaGTGTGGTGATGATGGTGATGGTGGTGGTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: RQRQRHRSWAPG*CGDDGDGGGDG Trigger: ACCATCACCACCACCATCACCATCATCACCACACCAGCCAGGTGCCCAGCTACGGTGGCGCTGCCTCTGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000287538.10 ENST00000370606.3 |
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| CDS GCA 72 bp | AGGAAGTCCAGGGTTGTGGCTGGTGCTAGTTTGAACTaGAGAAGGGGTTTTAGTGGTATCTTTACTGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RKSRVVAGASLN*RRGFSGIFTVC Trigger: GCAAACAGTAAAGATACCACTAAAACCCCTTCTGCAGTTCAAACTAGCACCAGCCACAACCCTGGACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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| CDS CCA 72 bp | AACCCTGCATTTAGGATAGGTAGTGTTATGGAGGGCTaGCTGCTGCATACCAACGTCAGTATCAAGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NPAFRIGSVMEG*LLHTNVSIKFF Trigger: GAAGAACTTGATACTGACGTTGGTATGCAGCAGCCAGCCCTCCATAACACTACCTATCCTAAATGCAGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370606.3 |
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| CDS GCA 72 bp | AACTGCAGAAGGGGTTTTAGTGGTATCTTTACTGTTTaGAGAAGCTATAGCGGGTGGAGTGGAAGATTCATA | + |
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Preference number: 6 (lower is better) Translates to: NCRRGFSGIFTV*RSYSGWSGRFI Trigger: TATGAATCTTCCACTCCACCCGCTATAGCTTCTGCAAACAGTAAAGATACCACTAAAACCCCTTCTGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000287538.10 |
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