RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZHX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000174306

Ensembl transcript IDs: ENST00000309060.7, ENST00000373261.5, ENST00000419740.6, ENST00000421422.1, ENST00000432768.6, ENST00000436099.6, ENST00000436440.6, ENST00000485686.2, ENST00000487057.5, ENST00000544979.6, ENST00000558993.1, ENST00000559028.5, ENST00000559234.5, ENST00000559296.1, ENST00000559436.2, ENST00000560361.5, ENST00000560364.5, ENST00000560456.5, ENST00000560759.5, ENST00000561291.5, ENST00000683867.1

Found 2234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCTGGAAGCTCTCCCAGGTGCCCAGCA +
Preference number: 1 (lower is better)
Translates to: CCLLGGGQAEGSGRL*AVCEDSGSSPRCPA
Trigger: TGCTGGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 90 bp CCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCCTAGTGCACTaGTGTCCCTCCAACACAGGCTACTCCCCCAACACCCATGTGCCA +
Preference number: 1 (lower is better)
Translates to: PGDGFSLGRPSCLVH*CPSNTGYSPNTHVP
Trigger: TGGCACATGGGTGTTGGGGGAGTAGCCTGTGTTGGAGGGACACCAGTGCACTAGGCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 90 bp AGACCTCTCCTGGAAGGCAGAAGGGGCCACCGCCATGCTTGTCCTTaGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: RPLLEGRRGHRHACP*SHMSTVPCQVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTTCTGCCTTCCAGGAGAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 90 bp GGATCTGGAGGTGAGGCACTGGGTGGTTTCTCAGACACCCGGAGATaGCTTCAGCCTGGGCCGCCCCAGCTGCCTAGTGCACTGGTGTCC +
Preference number: 1 (lower is better)
Translates to: GSGGEALGGFSDTRR*LQPGPPQLPSALVS
Trigger: GGACACCAGTGCACTAGGCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCAGTGCCTCACCTCCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 90 bp TGCTCAGGCTCCTCTCAGTACCCTGGGGCTCACCGCCTATCCAAGTaGACAGCAGGGAAGGTGCCTAGAGTCCCCACCAGAGCGGCTGCC +
Preference number: 1 (lower is better)
Translates to: CSGSSQYPGAHRLSK*TAGKVPRVPTRAAA
Trigger: GGCAGCCGCTCTGGTGGGGACTCTAGGCACCTTCCCTGCTGTCCACTTGGATAGGCGGTGAGCCCCAGGGTACTGAGAGGAGCCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 90 bp TGGAAGGCAGAAGGGGCCACCGCCATGCTTGTCCTTGGAGCCACATaGGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGTAGGGGAGAA +
Preference number: 1 (lower is better)
Translates to: WKAEGATAMLVLGAT*ARCPARSSSLGRGE
Trigger: TTCTCCCCTACCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTTCTGCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 90 bp AAAAGCATCCTCACAAGGACCAGTGATGCCCAGCACCCTTGGGCATaGATCCAGCACACCGGCCAGACCCTGGGGTGGGAGCCACGGGCA +
Preference number: 1 (lower is better)
Translates to: KSILTRTSDAQHPWA*IQHTGQTLGWEPRA
Trigger: TGCCCGTGGCTCCCACCCCAGGGTCTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGGATGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 90 bp GCTTCTCCCCTGGCCCCGACCCAGTCTAACCGAGAACAACCGGATTaGTGTGCTGGGTCCCTGCTGAGGAGTAGGGACTGGCGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: ASPLAPTQSNREQPD*CAGSLLRSRDWRSS
Trigger: TGAGGAGCGCCAGTCCCTACTCCTCAGCAGGGACCCAGCACAGCAATCCGGTTGTTCTCGGTTAGACTGGGTCGGGGCCAGGGGAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp AGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTT +
Preference number: 1 (lower is better)
Translates to: SSRAWERHVAAESRV*LFHVAGGFPDWPVL
Trigger: AAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR TCA 90 bp CAGTGCATGCAGGGCTCTGGAGGTGATGCCAGCAGGATCTGGAGGTaGGGCACTGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCC +
Preference number: 1 (lower is better)
Translates to: QCMQGSGGDASRIWR*GTGWFLRHPEMASA
Trigger: GGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCAGTGCCTCACCTCCAGATCCTGCTGGCATCACCTCCAGAGCCCTGCATGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 90 bp CCTAGAGTCCCCACCAGAGCGGCTGCCTTCCTCCCTTCGCTCAGCTaGCAGAGCAGCCACGAAAGCCAAATTCTCAGGGCTGTGGAAGCT +
Preference number: 1 (lower is better)
Translates to: PRVPTRAAAFLPSLS*QSSHESQILRAVEA
Trigger: AGCTTCCACAGCCCTGAGAATTTGGCTTTCGTGGCTGCTCTGGCAGCTGAGCGAAGGGAGGAAGGCAGCCGCTCTGGTGGGGACTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp GAACAACCGGATTGCTGTGCTGGGTCCCTGCTGAGGAGTAGGGACTaGCGCTCCTCACTCCTGCTGACAATCTCATGTGGGGCTCTGGCC +
Preference number: 1 (lower is better)
Translates to: EQPDCCAGSLLRSRD*RSSLLLTISCGALA
Trigger: GGCCAGAGCCCCACATGAGATTGTCAGCAGGAGTGAGGAGCGCCAGTCCCTACTCCTCAGCAGGGACCCAGCACAGCAATCCGGTTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp ATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTaGTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: IVGGRTDENPILLAA*LVVGRPRVAAGSGL
Trigger: CAGCCCAGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR GCA 90 bp TTCAAAAGCAAGACCTCTCCTGGAAGGCAGAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: FKSKTSPGRQKGPPP*LSLEPHEHGALPGP
Trigger: TGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTTCTGCCTTCCAGGAGAGGTCTTGCTTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 90 bp GCCAGGAGAGAGAGGGAGAGAACACAGGACCTGCCCCTAGGCCACTaGCTGAGCAGGATAAAACCCACAAGGGCACATCTCAGGCTACGG +
Preference number: 1 (lower is better)
Translates to: ARRERERTQDLPLGH*LSRIKPTRAHLRLR
Trigger: CCGTAGCCTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGGTCCTGTGTTCTCTCCCTCTCTCTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp AACTTTAAAAGCATCCTCACAAGGACCAGTGATGCCCAGCACCCTTaGGCATGCATCCAGCACACCGGCCAGACCCTGGGGTGGGAGCCA +
Preference number: 1 (lower is better)
Translates to: NFKSILTRTSDAQHP*ACIQHTGQTLGWEP
Trigger: TGGCTCCCACCCCAGGGTCTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGGATGCTTTTAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 90 bp GGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGA +
Preference number: 1 (lower is better)
Translates to: GNGMWQQRVGFGSST*QAVSQTGQSFTLIR
Trigger: TCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 90 bp TCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCACCCCTCCTaGTGTGACCTGGCACTGGGAACACACAGATTGCAGCAGAAACCT +
Preference number: 1 (lower is better)
Translates to: SVSSETTWLALPHPS*CDLALGTHRLQQKP
Trigger: AGGTTTCTGCTGCAATCTGTGTGTTCCCAGTGCCAGGTCACACCAGGAGGGGTGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp TGCACTGGTGTCCCTCCAACACAGGCTACTCCCCCAACACCCATGTaGCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACG +
Preference number: 1 (lower is better)
Translates to: CTGVPPTQATPPTPM*HQVSQLHTPDARFT
Trigger: CGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTGGGGGAGTAGCCTGTGTTGGAGGGACACCAGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 90 bp AGACGTAGCTTTGTGCCTATAACTTCCCTGCCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAGCAATCCCCAGAGAACAGACACAGG +
Preference number: 1 (lower is better)
Translates to: RRSFVPITSLPDCGR*GAPVTQQSPENRHR
Trigger: CCTGTGTCTGTTCTCTGGGGATTGCTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGGCAGGGAAGTTATAGGCACAAAGCTACGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
3UTR GCA 90 bp CCAAGGCCAGACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTaGAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCC +
Preference number: 1 (lower is better)
Translates to: PRPDALCTPINFTTK*RRSVSSETTWLALP
Trigger: GGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTCTGGCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp CCTGGTGTGGCATGGCCCAACCATGTCCCTGCCGCCCCACTTAAATaGCCAGAGAAAACTACATGGTGGGTAGATGAGGTTGAAGCCTTG +
Preference number: 1 (lower is better)
Translates to: PGVAWPNHVPAAPLK*PEKTTWWVDEVEAL
Trigger: CAAGGCTTCAACCTCATCTACCCACCATGTAGTTTTCTCTGGCCATTTAAGTGGGGCGGCAGGGACATGGTTGGGCCATGCCACACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp TGCCCCACCCCTCCTGGTGTGACCTGGCACTGGGAACACACAGATTaGAGCAGAAACCTGTTGGTTCCATTTGCACTCAGAGCAAACCAA +
Preference number: 1 (lower is better)
Translates to: CPTPPGVTWHWEHTD*SRNLLVPFALRANQ
Trigger: TTGGTTTGCTCTGAGTGCAAATGGAACCAACAGGTTTCTGCTGCAATCTGTGTGTTCCCAGTGCCAGGTCACACCAGGAGGGGTGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp TCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTaGCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGTGCTGAAGAC +
Preference number: 1 (lower is better)
Translates to: SLLTADCSTVTPQSY*PEVRPQGTRLCAED
Trigger: GTCTTCAGCACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 90 bp ACATGGTGGGTAGATGAGGTTGAAGCCTTGCTTGGGGAAGGGACTTaGGCACAGGAGAAAGGCTTGAGCTCCACAACTGCCCATTTGCTC +
Preference number: 1 (lower is better)
Translates to: TWWVDEVEALLGEGT*AQEKGLSSTTAHLL
Trigger: GAGCAAATGGGCAGTTGTGGAGCTCAAGCCTTTCTCCTGTGCTCAAGTCCCTTCCCCAAGCAAGGCTTCAACCTCATCTACCCACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp CTGCTGACAATCTCATGTGGGGCTCTGGCCCTGTTCCAAGCAAACTaGAAGAACGAGACCAAACAGTATGGGCAGGAACCAGGGATGAGT +
Preference number: 1 (lower is better)
Translates to: LLTISCGALALFQAN*KNETKQYGQEPGMS
Trigger: ACTCATCCCTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGGCCAGAGCCCCACATGAGATTGTCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 90 bp CCCATTCAAAGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATaGAGAACCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGAC +
Preference number: 1 (lower is better)
Translates to: PIQRGQICGQARAQE*RTKKEALNPSPRPD
Trigger: GTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 90 bp GTACTTGTGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTA +
Preference number: 1 (lower is better)
Translates to: VLVAWHSGKQVVSKK*AELQVDRSLVRPSL
Trigger: TAAAGAGGGGCGAACTAAAGACCTGTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCACAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 90 bp CACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTaGTGGGCTCCTTACATGGGCATTCTTGCCTTTTGTAGTGTAGCC +
Preference number: 1 (lower is better)
Translates to: HSLSSNSRGRRICPD*WAPYMGILAFCSVA
Trigger: GGCTACACTACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 90 bp TCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTaGGCTCCTTACATGGGCATTCTTGCCTTTTGTAGTGTAGCCCTG +
Preference number: 1 (lower is better)
Translates to: SLSSNSRGRRICPDC*APYMGILAFCSVAL
Trigger: CAGGGCTACACTACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 90 bp GAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAATCAGATCAAATTCAGTCTGTTTCTG +
Preference number: 1 (lower is better)
Translates to: ESRVWLFHVAGGFPD*PVLHINQIKFSLFL
Trigger: CAGAAACAGACTGAATTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421422.1
3UTR CCA 90 bp CAGGAGAAAGGCTTGAGCTCCACAACTGCCCATTTGCTCAGACAATaGAGCTTTTCTGAGATCAAGTGCTCCCCAAACTACATGGGAGTA +
Preference number: 1 (lower is better)
Translates to: QEKGLSSTTAHLLRQ*SFSEIKCSPNYMGV
Trigger: TACTCCCATGTAGTTTGGGGAGCACTTGATCTCAGAAAAGCTCCATTGTCTGAGCAAATGGGCAGTTGTGGAGCTCAAGCCTTTCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp TCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCAGAGTTTaGCTAAAGTTTCATTGTGCCTCAAAACAAACAAAAACAGGGCAG +
Preference number: 1 (lower is better)
Translates to: SHTWPWQEMGPSCRV*LKFHCASKQTKTGQ
Trigger: CTGCCCTGTTTTTGTTTGTTTTGAGGCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp GATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATaGCAGGAGATGGGACCCTCTTGCAGAGTTTGGCTAAAGTTTCAT +
Preference number: 1 (lower is better)
Translates to: DRVCCFLGLVSHTWP*QEMGPSCRVWLKFH
Trigger: ATGAAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp TTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTaGCCATGGCAGGAGATGGGACCCTCTTGCAGAGTTTGGCTAAAG +
Preference number: 1 (lower is better)
Translates to: LSDRVCCFLGLVSHT*PWQEMGPSCRVWLK
Trigger: CTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 90 bp TCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTG +
Preference number: 1 (lower is better)
Translates to: SSLNAAEISSKVLLP*GTQRGHKGVPDVAL
Trigger: CAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
3UTR TCA 90 bp CCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTaGTCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCT +
Preference number: 1 (lower is better)
Translates to: PFKHLRDDCLPHHRF*SSFKDKVQSILTHS
Trigger: AGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 90 bp GTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGTGCTaGAGACCAAAATGCAAATGGGTGCTAGAAAACCAGGAATCAAGA +
Preference number: 1 (lower is better)
Translates to: VLLPRSPATGNKALC*RPKCKWVLENQESR
Trigger: TCTTGATTCCTGGTTTTCTAGCACCCATTTGCATTTTGGTCTTCAGCACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp GGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTaGAGAGTTTGGCTAAAGTTTCATTGTGCCTCAAAACAAACAAAA +
Preference number: 1 (lower is better)
Translates to: GLVSHTWPWQEMGPS*RVWLKFHCASKQTK
Trigger: TTTTGTTTGTTTTGAGGCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp AGGGTAAAGAATTCCCATTCTACCCAAGGCTTAAGTGATAGAGTATaGTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: RVKNSHSTQGLSDRV*CFLGLVSHTWPWQE
Trigger: CTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGTAGAATGGGAATTCTTTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp GAAAGGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTaGCAAGCCATCCAACTAGGGCGTTCTTTTTCAGGAACCCAAGAT +
Preference number: 1 (lower is better)
Translates to: ERSFKLYNHYQTPRP*QAIQLGRSFSGTQD
Trigger: ATCTTGGGTTCCTGAAAAAGAACGCCCTAGTTGGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp TCTTCTTGGCTGGCTCTCCTCTCCTGCAAGTTGCCTTTATCCACTTaGGGTGTGATATCTGAACTGAAAAAGCTGCACCAATCTGAGGAT +
Preference number: 1 (lower is better)
Translates to: SSWLALLSCKLPLST*GVISELKKLHQSED
Trigger: ATCCTCAGATTGGTGCAGCTTTTTCAGTTCAGATATCACACCCCAAGTGGATAAAGGCAACTTGCAGGAGAGGAGAGCCAGCCAAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 90 bp GCCAGAGCAGCCACGAAAGCCAAATTCTCAGGGCTGTGGAAGCTTTaGACCAGCAACAACAAGCTAGTACCTATATGTTCTTTATCATCC +
Preference number: 1 (lower is better)
Translates to: ARAATKAKFSGLWKL*TSNNKLVPICSLSS
Trigger: GGATGATAAAGAACATATAGGTACTAGCTTGTTGTTGCTGGTCCAAAGCTTCCACAGCCCTGAGAATTTGGCTTTCGTGGCTGCTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 90 bp CTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGGGATGAGTaGCAAGATCTCCCTAAACAAATTACAGGATTCATAGGTACCATG +
Preference number: 1 (lower is better)
Translates to: LQERDQTVWAGTRDE*QDLPKQITGFIGTM
Trigger: CATGGTACCTATGAATCCTGTAATTTGTTTAGGGAGATCTTGTCACTCATCCCTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 90 bp CAAACAAAAACAGGGCAGTTGCCTCTTACTTGTTTAGCACCAAGATaGTCACCTTTTCAGCCATCTCTCCTGACAGCAGACTGCTCAACA +
Preference number: 1 (lower is better)
Translates to: QTKTGQLPLTCLAPR*SPFQPSLLTADCST
Trigger: TGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTGAAAAGGTGATCATCTTGGTGCTAAACAAGTAAGAGGCAACTGCCCTGTTTTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 90 bp CCCAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATaGGCGTTTTACGAGAATCAAATGAGTATTTATACTGTATATGTG +
Preference number: 1 (lower is better)
Translates to: PNTHVPPSFSTAHAR*AFYENQMSIYTVYV
Trigger: CACATATACAGTATAAATACTCATTTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CAA 90 bp CAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: QQPGMGTACGSRESG*ALPRGRRFPRLASP
Trigger: AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CAA 90 bp AAGACCTCTCCTGGAAGGCAGAAGGGGCCACCGCCATGCTTGTCCTaGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: KTSPGRQKGPPPCLS*EPHEHGALPGPVPW
Trigger: CCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTTCTGCCTTCCAGGAGAGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGGAGCCACGGGCACTCTaGGTGTTCTGCCAGGGATCT +
Preference number: 2 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGEPRAL*VFCQGS
Trigger: AGATCCCTGGCAGAACACCCAGAGTGCCCGTGGCTC...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTGTGCCCACGAAGCCTaGTACTTGTGGCTTGGCACT +
Preference number: 2 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCCAHEA*YLWLGT
Trigger: AGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CAA 90 bp GTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGGGCTGTCT +
Preference number: 2 (lower is better)
Translates to: VGGRTDENPILLAAC*VVGRPRVAAGSGLS
Trigger: AGACAGCCCAGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR GCA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCCCCCACCAGAGCGGCTaGCTTCCTCCCTTCGCTCAG +
Preference number: 2 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLPHQSG*LPPFAQ
Trigger: CTGAGCGAAGGGAGGAAGGCAGCCGCTCTGGTGGGG...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGACCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CAA 90 bp AAAAGCAAGACCTCTCCTGGAAGGCAGAAGGGGCCACCGCCATGCTaGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTT +
Preference number: 2 (lower is better)
Translates to: KSKTSPGRQKGPPPC*SLEPHEHGALPGPV
Trigger: AACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTTCTGCCTTCCAGGAGAGGTCTTGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGCAGCACCCTTGGGCATaGATCCAGCACACCGGCCAG +
Preference number: 2 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVQHPWA*IQHTGQ
Trigger: CTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTG...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCCAGCACCCTTGGGCATaGATCCAGCACACCGGCCAG +
Preference number: 2 (lower is better)
Translates to: VQNHSELSCDRATYLAAAQHPWA*IQHTGQ
Trigger: CTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTG...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR TCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAG +
Preference number: 2 (lower is better)
Translates to: LKHHQCFLPKALALSLGSPDCGR*GAPVTQ
Trigger: CTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 2 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR GCA 90 bp CCCAAGGCCCTGGCAAGCCATCCAACTAGGGCGTTCTTTTTCAGGAACCCAAGAATGAGCACGGTGCCCTaGCAGGTCCAGTTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PKALASHPTRAFFFRNPRMSTVP*QVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCAT...TCTTGGGTTCCTGAAAAAGAACGCCCTAGTTGGATGGCTTGCCAGGGCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCCAGCACCCTTGGGCATaGATCCAGCACACCGGCCAG +
Preference number: 2 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFQHPWA*IQHTGQ
Trigger: CTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTG...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCACCCAGGAGGTGTCTGTaGCCACGAAGCCTGGTACTT +
Preference number: 2 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPPRRCL*PRSLVL
Trigger: AAGTACCAGGCTTCGTGGGCACAGACACCTCCTGGG...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGCTAGCACTGTCACTCTaGCCAGCCCAGGAGGTGTCT +
Preference number: 2 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQLALSL*PAQEVS
Trigger: AGACACCTCCTGGGCTGGGCAGAGTGACAGTGCTAG...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 2 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 2 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATTCAGACACCCGGAGATaGCTTCAGCCTGGGCCGCCC +
Preference number: 2 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDSDTRR*LQPGPP
Trigger: GGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGA...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCCAAACCCCAAGGCCCTaGCAAGCCATCCAACTAGGG +
Preference number: 2 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCQTPRP*QAIQLG
Trigger: CCCTAGTTGGATGGCTTGCCAGGGCCTTGGGGTTTG...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CCA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGAGCCCTGGTGTGGCATaGCCCAACCATGTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWSPGVA*PNHVPA
Trigger: GGCAGGGACATGGTTGGGCCATGCCACACCAGGGCT...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTaGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCA +
Preference number: 2 (lower is better)
Translates to: ERSYIVGGRTDENPI*LAACLVVGRPRVAA
Trigger: TGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR TCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCCAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGCAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCCCTCACAAGGACCAGTaGTGCCCAGCACCCTTGGGC +
Preference number: 2 (lower is better)
Translates to: TSYNVPLSTCVMTASLIIPHKDQ*CPAPLG
Trigger: GCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGG...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 2 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR GCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCGTCCCTTTAAGCACCTaGGTGATGACTGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: VQNHSELSCDRATYLAAAVPLST*VMTASL
Trigger: GAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGAC...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTCCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RSYIVGGRTDENPILLAAPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAACACCGGCCAGACCCTaGGGTGGGAGCCACGGGCAC +
Preference number: 2 (lower is better)
Translates to: TASLIIAFDHLSRIRSRATPARP*GGSHGH
Trigger: GTGCCCGTGGCTCCCACCCCAGGGTCTGGCCGGTGT...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp TCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGTGACCTGGGTGGGCTGCTaGCTTTGCCCTGGAAGACTT +
Preference number: 2 (lower is better)
Translates to: SLPSLIAQKSGHREQGFVTWVGC*LCPGRL
Trigger: AAGTCTTCCAGGGCAAAGCCAGCAGCCCACCCAGGT...CACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCGTGGAGAAAGGGCTCTaGAAACCGCAGTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: VQNHSELSCDRATYLAAAVEKGL*KPQWSK
Trigger: CTTTGACCACTGCGGTTTTCAGAGCCCTTTCTCCAC...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 2 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGGTGGTCTGGGCAGGCTaGCTGAGAGAGGTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQVVWAG*LREVCA
Trigger: AGCACAGACCTCTCTCAGCCAGCCTGCCCAGACCAC...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTCAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCGTCCTTGGAGCCACATaGGCACGGTGCCCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSVLGAT*ARCPAR
Trigger: CCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGAC...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCCACTAGTACATGTGTaGGCCCGCAAGGCACTACCC +
Preference number: 2 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQPLVHV*ARKALP
Trigger: GGGTAGTGCCTTGCGGGCTCACACATGTACTAGTGG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCCCTGGAAGACTTaGCTATGTGGGCCTTCATGT +
Preference number: 2 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLLPWKT*LCGPSC
Trigger: ACATGAAGGCCCACATAGTCAAGTCTTCCAGGGCAA...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGCACTCTGGGTGTTCTaGCAGGGATCTCTGCATGCA +
Preference number: 2 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFALWVF*QGSLHA
Trigger: TGCATGCAGAGATCCCTGGCAGAACACCCAGAGTGC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACCCAGGAGGTGTCTGTaGCCACGAAGCCTGGTACTT +
Preference number: 2 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLPRRCL*PRSLVL
Trigger: AAGTACCAGGCTTCGTGGGCACAGACACCTCCTGGG...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCCTAGCACTGTCACTCTaGCCAGCCCAGGAGGTGTCT +
Preference number: 2 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCLALSL*PAQEVS
Trigger: AGACACCTCCTGGGCTGGGCAGAGTGACAGTGCTAG...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACAT +
Preference number: 2 (lower is better)
Translates to: TSYNVPLSTCVMTASLIIKGPPP*LSLEPH
Trigger: ATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTT...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCAGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: RALKTAVVKASGCGYRFPAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 2 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGCTGGAGGTGAGGCACTaGGTGGTTTCTCAGACACCC +
Preference number: 2 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLLEVRH*VVSQTP
Trigger: GGGTGTCTGAGAAACCACCCAGTGCCTCACCTCCAG...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGCTGTTTCTGAGCTTCTaGCTGCCCTCTGATGGGGTC +
Preference number: 2 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWLFLSF*LPSDGV
Trigger: GACCCCATCAGAGGGCAGCCAGAAGCTCAGAAACAG...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421422.1
3UTR-3UTR TCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAACCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAG +
Preference number: 2 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEPDCGR*GAPVTQ
Trigger: CTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGG...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWKVLLP*GTQRGH
Trigger: GTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTT...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGCACTCTGGGTGTTCTaGCAGGGATCTCTGCATGCA +
Preference number: 2 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDALWVF*QGSLHA
Trigger: TGCATGCAGAGATCCCTGGCAGAACACCCAGAGTGC...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGGCACTCTGGGTGTTCTaGCAGGGATCTCTGCATGCA +
Preference number: 2 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLALWVF*QGSLHA
Trigger: TGCATGCAGAGATCCCTGGCAGAACACCCAGAGTGC...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCACCACCAGTGCTTCTTaGCCAAAGCCCTTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: TSYNVPLSTCVMTASLIITTSAS*PKPLPS
Trigger: AGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGT...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCAATACAAAAATAGGCTaGAAAACTTGCCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCNTKIG*KTCQVL
Trigger: GAGTACTTGGCAAGTTTTGCAGCCTATTTTTGTATT...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCAACTCTTCAGCCAGTaGATGCAGGGCTCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQQLFSQ*MQGSGG
Trigger: ACCTCCAGAGCCCTGCATGCACTGGCTGAAGAGTTG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATCAACTCTTCAGCCAGTaGATGCAGGGCTCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDQLFSQ*MQGSGG
Trigger: ACCTCCAGAGCCCTGCATGCACTGGCTGAAGAGTTG...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 2 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 2 (lower is better)
Translates to: ERSYIVGGRTDENPILLAGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCCCCTTGCCCTCTCTCTaGGGTCTTCTAGCACTGTCA +
Preference number: 2 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCPLPSL*GLLALS
Trigger: TGACAGTGCTAGAAGACCCCAGAGAGAGGGCAAGGG...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp TCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGTGAAGAGGTCAGATTTGTaGGCAGGCAAGAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: SLPSLIAQKSGHREQGFVKRSDL*AGKSSG
Trigger: TCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTT...CACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp TCTCTGTGCACGACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTaGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACT +
Preference number: 2 (lower is better)
Translates to: SLCTTGWIQGFAPKP*STSYNVPLSTCVMT
Trigger: AGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGTCGTGCACAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGTTGCCCTGGAAGACTTaGCTATGTGGGCCTTCATGT +
Preference number: 2 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWLPWKT*LCGPSC
Trigger: ACATGAAGGCCCACATAGTCAAGTCTTCCAGGGCAA...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTCCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR GCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAATGAGCACGGTGCCCTaGCAGGTCCAGTTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRMSTVP*QVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCAT...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 2 (lower is better)
Translates to: QVDRSLVRPSLPATLRATGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCGAGCCACGGGCACTCTaGGTGTTCTGCCAGGGATCT +
Preference number: 2 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSEPRAL*VFCQGS
Trigger: AGATCCCTGGCAGAACACCCAGAGTGCCCGTGGCTC...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAAAGATGTGGTCCCTATTaGGACAGGGAGGGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: PCATKFLNCTRQMRVLRERCGPY*DREGRR
Trigger: TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCT...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGGAGACAAATAAGATGTaGTCCCTATTGGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVETNKM*SLLGQG
Trigger: TCCCTGTCCCAATAGGGACCACATCTTATTTGTCTC...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp CCTGAACAGCCACCTGTCACTCAGCCAAGAGAAAGGAGCTTTAAGTaGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCAA +
Preference number: 2 (lower is better)
Translates to: PEQPPVTQPRERSFK*YNHYQTPRPWQAIQ
Trigger: TTGGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCCTTTCTCTTGGCTGAGTGACAGGTGGCTGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp CATTCTACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTaGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGC +
Preference number: 2 (lower is better)
Translates to: HSTQGLSDRVCCFLG*VSHTWPWQEMGPSC
Trigger: GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGTAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: QGTTQCSVQLPPCATREHKVLLP*GTQRGH
Trigger: GTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTT...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCAC +
Preference number: 2 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLKASLT*NVAGHH
Trigger: GTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTT...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACGTGGAGAAAGGGCTCTaGAAACCGCAGTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: QGTTQCSVQLPPCATREHVEKGL*KPQWSK
Trigger: CTTTGACCACTGCGGTTTTCAGAGCCCTTTCTCCAC...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTAACCATAGGAGGCTCTaGAATGAGTGTGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSNHRRL*NECGER
Trigger: CCTTTCTCCACACTCATTTCAGAGCCTCCTATGGTT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVVVSKK*AELQVD
Trigger: GTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCAC...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAGCTCCTCACTCCTGCTaGCAATCTCATGTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: CKWVLENQESRPCQEASTAPHSC*QSHVGL
Trigger: GAGCCCCACATGAGATTGTCAGCAGGAGTGAGGAGC...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCACCAAGTTTCTCAACTaGACACGCCAGATGCGCGTT +
Preference number: 2 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVTKFLN*TRQMRV
Trigger: AACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGT...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 2 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAGCTAGTGCCCATGGCTaGGTCACTGTAGGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAASAHG*VTVGPA
Trigger: TGCAGGACCTACAGTGACCCAGCCATGGGCACTAGC...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CAA 90 bp AGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAGGCCTTaGGCAACCTCCCTGACTTCCACAAAGGCTGCCCTCAGTAAAACT +
Preference number: 2 (lower is better)
Translates to: RKPGIKTLSGGIYRP*ATSLTSTKAALSKT
Trigger: AGTTTTACTGAGGGCAGCCTTTGTGGAAGTCAGGGAGGTTGCCAAAGGCCTGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCTCTGCCAGGGATCTCTaGATGCAAGTCTTTGTGCTA +
Preference number: 2 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCSARDL*MQVFVL
Trigger: TAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGA...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAACCACCAGTGCTTCTTaGCCAAAGCCCTTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: TCVMTASLIIAFDHLSRITTSAS*PKPLPS
Trigger: AGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGT...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACTAAAACACCACCAGTaGTTCTTGCCCAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLLKHHQ*FLPKAL
Trigger: AAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp GGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCACTGCACACGCCAGATaGGCGTTTTACGAGAATCAA +
Preference number: 2 (lower is better)
Translates to: GALSCTITTKPQGPGKPSTAHAR*AFYENQ
Trigger: TTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGT...GGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGAAAATCAAAACTGGTTaGCTCACCAGCCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQKIKTG*LTSPGV
Trigger: CACACCAGGGCTGGTGAGGCAACCAGTTTTGATTTT...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 2 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCACTGGTACTTGTGGCTTaGCACTCTGGGAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: TASLIIAFDHLSRIRSRALVLVA*HSGKQV
Trigger: CACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAG...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCCCCTTGCCCTCTCTCTaGGGTCTTCTAGCACTGTCA +
Preference number: 2 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTPLPSL*GLLALS
Trigger: TGACAGTGCTAGAAGACCCCAGAGAGAGGGCAAGGG...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp AACTTCTCTGTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTaGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAAAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: NFSVEGLRPHSKRSD*WAGKSSGMKNQKGG
Trigger: GCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp CTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCAGAGTTaGGCTAAAGTTTCATTGTGCCTCAAAACAAACAAAAACAGGGCA +
Preference number: 2 (lower is better)
Translates to: LSHLAMAGDGTLLQS*AKVSLCLKTNKNRA
Trigger: TGCCCTGTTTTTGTTTGTTTTGAGGCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp CGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTaGCAGAGTTTGGCTAAAGTTTCATTGTGCCTCAAAACAAACAAA +
Preference number: 2 (lower is better)
Translates to: RFGLSHLAMAGDGTL*QSLAKVSLCLKTNK
Trigger: TTTGTTTGTTTTGAGGCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGACCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAG +
Preference number: 2 (lower is better)
Translates to: DDFTISDESNCIQRKGIRPDCGR*GAPVTQ
Trigger: CTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGG...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAATGAGCACGGTGCCCTaGCAGGTCCAGTTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: DDFTISDESNCIQRKGIRMSTVP*QVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCAT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCATAGGCTGCAAAACTTaGCAAGTACTCACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVIGCKT*QVLTSP
Trigger: GGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 2 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR TCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCAC +
Preference number: 2 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAKASLT*NVAGHH
Trigger: GTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTT...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAVVSKK*AELQVD
Trigger: GTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCAC...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR TCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAAATTCAGTCTGTTTCTaGGCTTCTGGCTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: KDKVQSILTHSHPTAEEENSVCF*ASGCPL
Trigger: CAGAGGGCAGCCAGAAGCTCAGAAACAGACTGAATT...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421422.1
3UTR-3UTR GCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCTCTCTTCAAAGGTACTaGTTCCTTGAGGAACACAAA +
Preference number: 2 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFSLQRY*FLEEHK
Trigger: TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGA...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCATGTAGCCCTGGCTGTTaGGCAGGGCTAACATCTATA +
Preference number: 2 (lower is better)
Translates to: TASLIIAFDHLSRIRSRACSPGC*AGLTSI
Trigger: TATAGATGTTAGCCCTGCCCAACAGCCAGGGCTACA...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCCAGAGAAAACTACATaGTGGGTAGATGAGGTTGAA +
Preference number: 2 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQPEKTT*WVDEVE
Trigger: TTCAACCTCATCTACCCACCATGTAGTTTTCTCTGG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp TGCCAGAGCAGCCACGAAAGCCAAATTCTCAGGGCTGTGGAAGCTTaGGACCAGCAACAACAAGCTAGTACCTATATGTTCTTTATCATC +
Preference number: 2 (lower is better)
Translates to: CQSSHESQILRAVEA*DQQQQASTYMFFII
Trigger: GATGATAAAGAACATATAGGTACTAGCTTGTTGTTGCTGGTCCAAAGCTTCCACAGCCCTGAGAATTTGGCTTTCGTGGCTGCTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR TCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCAACCATAGGAGGCTCTaGAATGAGTGTGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSNHRRL*NECGER
Trigger: CCTTTCTCCACACTCATTTCAGAGCCTCCTATGGTT...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATTCTCTTCAAAGGTACTaGTTCCTTGAGGAACACAAA +
Preference number: 2 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDSLQRY*FLEEHK
Trigger: TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGA...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCCTAAAACACCACCAGTaGTTCTTGCCCAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTLKHHQ*FLPKAL
Trigger: AAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACAT +
Preference number: 2 (lower is better)
Translates to: DDFTISDESNCIQRKGIRKGPPP*LSLEPH
Trigger: ATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAACTGCACACGCCAGATaGGCGTTTTACGAGAATCAA +
Preference number: 2 (lower is better)
Translates to: TASLIIAFDHLSRIRSRATAHAR*AFYENQ
Trigger: TTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGT...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 2 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp ACAAAAATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: TKIGCKTCQVLTSPC*RQIRCGPYWDREGR
Trigger: TCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCATAGGCTGCAAAACTTaGCAAGTACTCACAAGTCCC +
Preference number: 2 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSIGCKT*QVLTSP
Trigger: GGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR GCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTAATACAAAAATAGGCTaGAAAACTTGCCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: RAGSTVLFHLKDELVPMANTKIG*KTCQVL
Trigger: GAGTACTTGGCAAGTTTTGCAGCCTATTTTTGTATT...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGACTGGTACTTGTGGCTTaGCACTCTGGGAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: DDFTISDESNCIQRKGIRLVLVA*HSGKQV
Trigger: CACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAG...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTAGATGTGGTCCCTATTaGGACAGGGAGGGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCRCGPY*DREGRR
Trigger: TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCT...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGATCCCCCACTGCCACTaGGCTAGTGTGGGTGTGTCT +
Preference number: 2 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMIPHCH*ASVGVS
Trigger: AGACACACCCACACTAGCCCAGTGGCAGTGGGGGAT...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR GCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGAATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCAATACAAAAATAGGCTaGAAAACTTGCCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVNTKIG*KTCQVL
Trigger: GAGTACTTGGCAAGTTTTGCAGCCTATTTTTGTATT...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 2 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGATAACTGAAAAGTTATaGTCCATGATTCAAACTCCC +
Preference number: 2 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQITEKL*SMIQTP
Trigger: GGGAGTTTGAATCATGGACCATAACTTTTCAGTTAT...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 90 bp GATCTAGAGCTAAATAGAAACTTCTTTGCCATAGAAACTTCTCTGTaGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: DLELNRNFFAIETSL*KDCVPIQRGQICGQ
Trigger: CTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTTTCTATGGCAAAGAAGTTTCTATTTAGCTCTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGATCTGCCAGGGATCTCTaGATGCAAGTCTTTGTGCTA +
Preference number: 2 (lower is better)
Translates to: DDFTISDESNCIQRKGIRSARDL*MQVFVL
Trigger: TAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGA...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGAGACAAATAAGATGTaGTCCCTATTGGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCETNKM*SLLGQG
Trigger: TCCCTGTCCCAATAGGGACCACATCTTATTTGTCTC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAGCTGGGCTCCTTACATaGGCATTCTTGCCTTTTGTA +
Preference number: 2 (lower is better)
Translates to: DDFTISDESNCIQRKGIRAGLLT*AFLPFV
Trigger: TACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGC...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CAA 90 bp AGGTTTGAAGTACCATTGAGGCCCATTTCAAATTGTACAAGCAATTaGTCCGTGTTCCCCTCCCTTATCCAAATCCACAGATACAAAATC +
Preference number: 2 (lower is better)
Translates to: RFEVPLRPISNCTSN*SVFPSLIQIHRYKI
Trigger: GATTTTGTATCTGTGGATTTGGATAAGGGAGGGGAACACGGACAAATTGCTTGTACAATTTGAAATGGGCCTCAATGGTACTTCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAATACAAAAATAGGCTaGAAAACTTGCCAAGTACTC +
Preference number: 2 (lower is better)
Translates to: DDFTISDESNCIQRKGIRNTKIG*KTCQVL
Trigger: GAGTACTTGGCAAGTTTTGCAGCCTATTTTTGTATT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp CCCAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGG +
Preference number: 3 (lower is better)
Translates to: PRCPAAGHGNGM*QQRVGFGSSTW
Trigger: CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 72 bp CTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCTGGAAGCTCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: LGGGQAEGSGRL*AVCEDSGSSPR
Trigger: CCTGGGAGAGCTTCCAGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 72 bp GGCTTCAGCCTGGGCCGCCCCAGCTGCCTAGTGCACTaGTGTCCCTCCAACACAGGCTACTCCCCCAACACC +
Preference number: 3 (lower is better)
Translates to: GFSLGRPSCLVH*CPSNTGYSPNT
Trigger: GGTGTTGGGGGAGTAGCCTGTGTTGGAGGGACACCAGTGCACTAGGCAGCTGGGGCGGCCCAGGCTGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp TGGGCTGTCTGCGAGGATTCTGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGGAACGGCATGTGGCAG +
Preference number: 3 (lower is better)
Translates to: WAVCEDSGSSPR*PAAGHGNGMWQ
Trigger: CTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACAGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 72 bp CTGGAAGGCAGAAGGGGCCACCGCCATGCTTGTCCTTaGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: LEGRRGHRHACP*SHMSTVPCQVQ
Trigger: CTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTTCTGCCTTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp GGTGAGGCACTGGGTGGTTTCTCAGACACCCGGAGATaGCTTCAGCCTGGGCCGCCCCAGCTGCCTAGTGCA +
Preference number: 3 (lower is better)
Translates to: GEALGGFSDTRR*LQPGPPQLPSA
Trigger: TGCACTAGGCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCAGTGCCTCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp AGCATCCTCACAAGGACCAGTGATGCCCAGCACCCTTaGGCATGCATCCAGCACACCGGCCAGACCCTGGGG +
Preference number: 3 (lower is better)
Translates to: SILTRTSDAQHP*ACIQHTGQTLG
Trigger: CCCCAGGGTCTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp AAGACCTCTCCTGGAAGGCAGAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACATGAGCACGGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: KTSPGRQKGPPP*LSLEPHEHGAL
Trigger: CAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTTCTGCCTTCCAGGAGAGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp CTGGCCCCGACCCAGTCTAACCGAGAACAACCGGATTaGTGTGCTGGGTCCCTGCTGAGGAGTAGGGACTGG +
Preference number: 3 (lower is better)
Translates to: LAPTQSNREQPD*CAGSLLRSRDW
Trigger: CCAGTCCCTACTCCTCAGCAGGGACCCAGCACAGCAATCCGGTTGTTCTCGGTTAGACTGGGTCGGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 72 bp GCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGG +
Preference number: 3 (lower is better)
Translates to: AWERHVAAESRV*LFHVAGGFPDW
Trigger: CCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 72 bp TGCCATCCCACATCCCCCACTGCCACTGGGCTAGTGTaGGTGTGTCTCTGTGCACGACTGGCTGGATTCAGG +
Preference number: 3 (lower is better)
Translates to: CHPTSPTATGLV*VCLCARLAGFR
Trigger: CCTGAATCCAGCCAGTCGTGCACAGAGACACACCCACACTAGCCCAGTGGCAGTGGGGGATGTGGGATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp TCCTCTCAGTACCCTGGGGCTCACCGCCTATCCAAGTaGACAGCAGGGAAGGTGCCTAGAGTCCCCACCAGA +
Preference number: 3 (lower is better)
Translates to: SSQYPGAHRLSK*TAGKVPRVPTR
Trigger: TCTGGTGGGGACTCTAGGCACCTTCCCTGCTGTCCACTTGGATAGGCGGTGAGCCCCAGGGTACTGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 72 bp GGTAGGGGAGAAGGACGGTCCCTAAAACACCACCAGTaGTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: GRGEGRSLKHHQ*FLPKALALSLG
Trigger: CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGACCGTCCTTCTCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp ATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACA +
Preference number: 3 (lower is better)
Translates to: MWQQRVGFGSST*QAVSQTGQSFT
Trigger: TGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 72 bp GATTGCTGTGCTGGGTCCCTGCTGAGGAGTAGGGACTaGCGCTCCTCACTCCTGCTGACAATCTCATGTGGG +
Preference number: 3 (lower is better)
Translates to: DCCAGSLLRSRD*RSSLLLTISCG
Trigger: CCCACATGAGATTGTCAGCAGGAGTGAGGAGCGCCAGTCCCTACTCCTCAGCAGGGACCCAGCACAGCAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp AACCAAGTGCAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCAAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: NQVQTLGEFRDHLVSPAPSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...TGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp AACCAAGTGCAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCACCTGGTACTTGTGGCTaGGCACTCTGGGAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: NQVQTLGEFRDHLVSPAPPGTCG*ALWEAG
Trigger: ACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAGG...TGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCACACGAAGCCTGGTACTaGTGGCTTGGCACTCTGGGA +
Preference number: 3 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPHEAWY*WLGTLG
Trigger: TCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTG...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 72 bp CTTCCCTGCCTGACTGTGGAAGGTGAGGGGCACCTGTaGCCCAGCAATCCCCAGAGAACAGACACAGGTCAT +
Preference number: 3 (lower is better)
Translates to: LPCLTVEGEGHL*PSNPQRTDTGH
Trigger: ATGACCTGTGTCTGTTCTCTGGGGATTGCTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGGCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp GTCCCTCCAACACAGGCTACTCCCCCAACACCCATGTaGCACCAAGTTTCTCAACTGCACACGCCAGATGCG +
Preference number: 3 (lower is better)
Translates to: VPPTQATPPTPM*HQVSQLHTPDA
Trigger: CGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTGGGGGAGTAGCCTGTGTTGGAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAAGGGCCACCGCCATGCTaGTCCTTGGAGCCACATGAG +
Preference number: 3 (lower is better)
Translates to: PCATKFLNCTRQMRVLREGPPPC*SLEPHE
Trigger: CTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCC...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCCTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGT +
Preference number: 3 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCLTSPC*RQIRCG
Trigger: ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAG...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp GAGAGGGAGAGAACACAGGACCTGCCCCTAGGCCACTaGCTGAGCAGGATAAAACCCACAAGGGCACATCTC +
Preference number: 3 (lower is better)
Translates to: ERERTQDLPLGH*LSRIKPTRAHL
Trigger: GAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGGTCCTGTGTTCTCTCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 72 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGG +
Preference number: 3 (lower is better)
Translates to: TLWEEELMRTPS*LLLAWWWAGRG
Trigger: CCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR CCA 72 bp CCAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTaGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: PGGVCAHEAWYL*LGTLGSRWFLR
Trigger: TCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp CAGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATaGGCTAGTGCCCATGGCTGGGTCACTGTAGGTCCT +
Preference number: 3 (lower is better)
Translates to: QGRQHCTFPPER*ASAHGWVTVGP
Trigger: AGGACCTACAGTGACCCAGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp GGTAAAAGGAGAGAAGGAAGCTGGGTCAAGAGACCCTaGAGAGGAGGGTCCGTGTCTGGAGTGAGGGGAACT +
Preference number: 3 (lower is better)
Translates to: GKRREGSWVKRP*RGGSVSGVRGT
Trigger: AGTTCCCCTCACTCCAGACACGGACCCTCCTCTTCAGGGTCTCTTGACCCAGCTTCCTTCTCTCCTTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CAA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CAA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCCTGACAATGCACTGCTaGGCTAACCAAAGTTTCTAC +
Preference number: 3 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSLTMHC*ANQSFY
Trigger: GTAGAAACTTTGGTTAGCCAAGCAGTGCATTGTCAG...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAACCTGGTACTTGTGGCTaGGCACTCTGGGAAGCAGGT +
Preference number: 3 (lower is better)
Translates to: PCATKFLNCTRQMRVLREPGTCG*ALWEAG
Trigger: ACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAGG...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCACGAAGCCTGGTACTaGTGGCTTGGCACTCTGGGA +
Preference number: 3 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVHEAWY*WLGTLG
Trigger: TCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTG...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCAAGATGTGGTCCCTATaGGGACAGGGAGGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCKMWSL*GQGGQK
Trigger: CTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTT...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 72 bp TGTGTCTCTGTGCACGACTGGCTGGATTCAGGGTTTTaGCCCCAAACCCTTGAGTACCTCCTACAATGTCCC +
Preference number: 3 (lower is better)
Translates to: CVSVHDWLDSGF*PQTLEYLLQCP
Trigger: GGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGTCGTGCACAGAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp ACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTaGCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGT +
Preference number: 3 (lower is better)
Translates to: TADCSTVTPQSY*PEVRPQGTRLC
Trigger: ACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 72 bp GCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCAGGTaGTTTCTAAGAAATGAGCGGAGCTACAGGTGGACA +
Preference number: 3 (lower is better)
Translates to: AWYLWLGTLGSR*FLRNERSYRWT
Trigger: TGTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp GCATGGCCCAACCATGTCCCTGCCGCCCCACTTAAATaGCCAGAGAAAACTACATGGTGGGTAGATGAGGTT +
Preference number: 3 (lower is better)
Translates to: AWPNHVPAAPLK*PEKTTWWVDEV
Trigger: AACCTCATCTACCCACCATGTAGTTTTCTCTGGCCATTTAAGTGGGGCGGCAGGGACATGGTTGGGCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 72 bp TGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATaGCAGGAGATGGGACCCTCTTGCAGAGTTTGGCTA +
Preference number: 3 (lower is better)
Translates to: CCFLGLVSHTWP*QEMGPSCRVWL
Trigger: TAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp GGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: GALSCTITTKPQGPGKPSRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...GGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: LKHHQCFLPKALALSLGSKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCAAGGTCCTGCATGAACTaGTCCACCAACTGTGTTTTG +
Preference number: 3 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPRSCMN*STNCVL
Trigger: CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCT...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 72 bp GCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGACAGGTCTTTAGTTCGC +
Preference number: 3 (lower is better)
Translates to: AWHSGKQVVSKK*AELQVDRSLVR
Trigger: GCGAACTAAAGACCTGTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp GCTAGTGCCCATGGCTGGGTCACTGTAGGTCCTGCATaGACTTGTCCACCAACTGTGTTTTGCTGTTTGGGT +
Preference number: 3 (lower is better)
Translates to: ASAHGWVTVGPA*TCPPTVFCCLG
Trigger: ACCCAAACAGCAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGGGCACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp CTGACTTCCACAAAGGCTGCCCTCAGTAAAACTCAATaGACAATGGCCAGCAGGGGAGAAAGGAAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LTSTKAALSKTQ*TMASRGERKVG
Trigger: GCCCACCTTCCTTTCTCCCCTGCTGGCCATTGTTCATTGAGTTTTACTGAGGGCAGCCTTTGTGGAAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 72 bp ATCTCATGTGGGGCTCTGGCCCTGTTCCAAGCAAACTaGAAGAACGAGACCAAACAGTATGGGCAGGAACCA +
Preference number: 3 (lower is better)
Translates to: ISCGALALFQAN*KNETKQYGQEP
Trigger: TGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGGCCAGAGCCCCACATGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCAATAGGCTGCAAAACTaGCCAAGTACTCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLNRLQN*PSTHKS
Trigger: GGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATT...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCAATAGGCTGCAAAACTaGCCAAGTACTCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: VQNHSELSCDRATYLAAANRLQN*PSTHKS
Trigger: GGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATT...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGTTTGCCCCCAAACCCTaGAGTACCTCCTACAATGTC +
Preference number: 3 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWFAPKP*STSYNV
Trigger: GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAA...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAATTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CAA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAACACGAAGCCTGGTACTaGTGGCTTGGCACTCTGGGA +
Preference number: 3 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEHEAWY*WLGTLG
Trigger: TCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTG...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp TCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGTGAATAGGCTGCAAAACTaGCCAAGTACTCACAAGTCC +
Preference number: 3 (lower is better)
Translates to: SLPSLIAQKSGHREQGFVNRLQN*PSTHKS
Trigger: GGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATT...CACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCAGGTCCTGCATGAACTaGTCCACCAACTGTGTTTTG +
Preference number: 3 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCRSCMN*STNCVL
Trigger: CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCT...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACCACAGTGTGGAGTCCTaGTGTCAAGGTGCTTTGGTC +
Preference number: 3 (lower is better)
Translates to: QGTTQCSVQLPPCATREHHSVES*CQGALV
Trigger: GACCAAAGCACCTTGACACAAGGACTCCACACTGTG...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 72 bp GCACTGAGTAGCCCACAAGGCAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCACTTAATGCAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: ALSSPQGKASLT*NVAGHHLMQQR
Trigger: TCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGTGGGCTACTCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp ATAGGAGGCTCTGAAATGAGTGTGGAGAAAGGGCTCTaGAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: IGGSEMSVEKGL*KPQWSKLQAVA
Trigger: AGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCTTTCTCCACACTCATTTCAGAGCCTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp AGAGGTCAGATTTGTGGGCAGGCAAGAGCTCAGGAATaGAGAACCAAAAAGGAGGCTCTCAACCCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: RGQICGQARAQE*RTKKEALNPSP
Trigger: TGGAGAGGGGTTGAGAGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 72 bp CTCCCCCAACACCCATGTGCCACCAAGTTTCTCAACTaGACACGCCAGATGCGCGTTTTACGAGAATCAAAT +
Preference number: 3 (lower is better)
Translates to: LPQHPCATKFLN*TRQMRVLRESN
Trigger: ATTTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTGGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp GGCACTGGGAACACACAGATTGCAGCAGAAACCTGTTaGTTCCATTTGCACTCAGAGCAAACCAAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: GTGNTQIAAETC*FHLHSEQTKQH
Trigger: GTGCTGCTTGGTTTGCTCTGAGTGCAAATGGAACCAACAGGTTTCTGCTGCAATCTGTGTGTTCCCAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTGCTAAAGTAGAGTTCTaGTTTCCAAGTTTGGGGACA +
Preference number: 3 (lower is better)
Translates to: LKHHQCFLPKALALSLGSAKVEF*FPSLGT
Trigger: TGTCCCCAAACTTGGAAACAAGAACTCTACTTTAGC...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAATCAGAGCAACCGGTCTaGGGGAAATTGAGGATTTAC +
Preference number: 3 (lower is better)
Translates to: PCATKFLNCTRQMRVLRESEQPV*GKLRIY
Trigger: GTAAATCCTCAATTTCCCCAAGACCGGTTGCTCTGA...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp AATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCACAAAGGGGTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: NAAEISSKVLLP*GTQRGHKGVPD
Trigger: GTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp TCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTaGTGGGCTCCTTACATGGGCATTCTTGCCTTTTGT +
Preference number: 3 (lower is better)
Translates to: SSNSRGRRICPD*WAPYMGILAFC
Trigger: ACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp GACGCTCTCTGTACTCCCATTAACTTCACAACCAAGTaGAGACGCTCGGTGAGTTCAGAGACCACTTGGTTA +
Preference number: 3 (lower is better)
Translates to: DALCTPINFTTK*RRSVSSETTWL
Trigger: TAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTTGTGAAGTTAATGGGAGTACAGAGAGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 72 bp TGGGCTGCTGGCTTTGCCCTGGAAGACTTGACTATGTaGGCCTTCATGTGTCTAGAGGATTTTTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: WAAGFALEDLTM*AFMCLEDFSSP
Trigger: TGGAGAAGAAAAATCCTCTAGACACATGAAGGCCCACATAGTCAAGTCTTCCAGGGCAAAGCCAGCAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 72 bp GGCTTGAGCTCCACAACTGCCCATTTGCTCAGACAATaGAGCTTTTCTGAGATCAAGTGCTCCCCAAACTAC +
Preference number: 3 (lower is better)
Translates to: GLSSTTAHLLRQ*SFSEIKCSPNY
Trigger: GTAGTTTGGGGAGCACTTGATCTCAGAAAAGCTCCATTGTCTGAGCAAATGGGCAGTTGTGGAGCTCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 72 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAATCAGATCAAATTCAGT +
Preference number: 3 (lower is better)
Translates to: VWLFHVAGGFPD*PVLHINQIKFS
Trigger: ACTGAATTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421422.1
3UTR-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CAA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 3 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CAA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCTGACAATGCACTGCTaGGCTAACCAAAGTTTCTAC +
Preference number: 3 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQLTMHC*ANQSFY
Trigger: GTAGAAACTTTGGTTAGCCAAGCAGTGCATTGTCAG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAGGGCCACCGCCATGCTaGTCCTTGGAGCCACATGAG +
Preference number: 3 (lower is better)
Translates to: DDFTISDESNCIQRKGIRGPPPC*SLEPHE
Trigger: CTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCC...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCAATCACTCGCCATTCTaGGCAATTCCTCAAAGGTTT +
Preference number: 3 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFNHSPF*AIPQRF
Trigger: AAACCTTTGAGGAATTGCCAAGAATGGCGAGTGATT...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTTGTGTCAAGGTGCTTaGGTCCACCTGAACAGCCAC +
Preference number: 3 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTLCQGA*VHLNSH
Trigger: GTGGCTGTTCAGGTGGACCAAAGCACCTTGACACAA...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 72 bp ACAGGGCAGTTGCCTCTTACTTGTTTAGCACCAAGATaGTCACCTTTTCAGCCATCTCTCCTGACAGCAGAC +
Preference number: 3 (lower is better)
Translates to: TGQLPLTCLAPR*SPFQPSLLTAD
Trigger: GTCTGCTGTCAGGAGAGATGGCTGAAAAGGTGATCATCTTGGTGCTAAACAAGTAAGAGGCAACTGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 3 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CAA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTAAGATGTGGTCCCTATaGGGACAGGGAGGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCKMWSL*GQGGQK
Trigger: CTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTT...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR TCA 72 bp AAGTCCTGCGAACCCAAAGATAGAACTTTCAGAAATTaGGGAAGGGGGTGCTTTCCCCTGTCCTTGTCCATA +
Preference number: 3 (lower is better)
Translates to: KSCEPKDRTFRN*GRGCFPLSLSI
Trigger: TATGGACAAGGACAGGGGAAAGCACCCCCTTCCTCAATTTCTGAAAGTTCTATCTTTGGGTTCGCAGGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CCA 72 bp AGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTaGTCCCTATTGGGACAGGGAGGGCAGAAGATGACA +
Preference number: 3 (lower is better)
Translates to: STHKSLFETNKM*SLLGQGGQKMT
Trigger: TGTCATCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CCA 72 bp TTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTaGCAAGCCATCCAACTAGGGCGTTCTTTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: FKLYNHYQTPRP*QAIQLGRSFSG
Trigger: TCCTGAAAAAGAACGCCCTAGTTGGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
3UTR-3UTR CAA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAAGATGTGGTCCCTATaGGGACAGGGAGGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: DDFTISDESNCIQRKGIRKMWSL*GQGGQK
Trigger: CTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACACTGTGTTTTGCTGTTaGGGTTGTAAATTAACCGTG +
Preference number: 3 (lower is better)
Translates to: QGTTQCSVQLPPCATREHTVFCC*GCKLTV
Trigger: CACGGTTAATTTACAACCCAAACAGCAAAACACAGT...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAAGGTCCTGCATGAACTaGTCCACCAACTGTGTTTTG +
Preference number: 3 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRRSCMN*STNCVL
Trigger: CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCT...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACGAAAGGAGCTTTAAGTaGTACAATCACTACCAAACC +
Preference number: 3 (lower is better)
Translates to: QGTTQCSVQLPPCATREHERSFK*YNHYQT
Trigger: GGTTTGGTAGTGATTGTACAACTTAAAGCTCCTTTC...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 72 bp AACTTCTTTGCCATAGAAACTTCTCTGTTGAAGGACTaGGTCCCCATTCAAAGAGGTCAGATTTGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: NFFAIETSLLKD*VPIQRGQICGQ
Trigger: CTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGAAGTTTCTATGGCAAAGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR GCA 72 bp AATTCCCATTCTACCCAAGGCTTAAGTGATAGAGTATaGTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCA +
Preference number: 3 (lower is better)
Translates to: NSHSTQGLSDRV*CFLGLVSHTWP
Trigger: TGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGTAGAATGGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
3UTR-3UTR CAA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCGCTAAAGTAGAGTTCTaGTTTCCAAGTTTGGGGACA +
Preference number: 3 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSAKVEF*FPSLGT
Trigger: TGTCCCCAAACTTGGAAACAAGAACTCTACTTTAGC...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCCTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGT +
Preference number: 3 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTLTSPC*RQIRCG
Trigger: ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAG...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR TCA 72 bp CGAGACCAAACAGTATGGGCAGGAACCAGGGATGAGTaGCAAGATCTCCCTAAACAAATTACAGGATTCATA +
Preference number: 3 (lower is better)
Translates to: RDQTVWAGTRDE*QDLPKQITGFI
Trigger: TATGAATCCTGTAATTTGTTTAGGGAGATCTTGTCACTCATCCCTGGTTCCTGCCCATACTGTTTGGTCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGACTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGT +
Preference number: 3 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRLTSPC*RQIRCG
Trigger: ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAG...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR GCA 72 bp CATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATaGGCGTTTTACGAGAATCAAATGAGTATTTATACT +
Preference number: 3 (lower is better)
Translates to: HVPPSFSTAHAR*AFYENQMSIYT
Trigger: AGTATAAATACTCATTTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR-3UTR CAA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGGCTAAAGTAGAGTTCTaGTTTCCAAGTTTGGGGACA +
Preference number: 3 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMAKVEF*FPSLGT
Trigger: TGTCCCCAAACTTGGAAACAAGAACTCTACTTTAGC...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR-3UTR CAA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTCCGGTCTTGGGGAAATaGAGGATTTACCATTTAGAA +
Preference number: 3 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTPVLGK*RIYHLE
Trigger: TTCTAAATGGTAAATCCTCAATTTCCCCAAGACCGG...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGTGCTGGGGCAGGCCGTaGGGAGCGACTGGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGCWGRP*GATGPH
Trigger: ATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCA...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCACACCGGCCAGACCCTaGGGTGGGAGCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGTPARP*GGSHGH
Trigger: GTGCCCGTGGCTCCCACCCCAGGGTCTGGCCGGTGT...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGTGCTGGGGCAGGCCGTaGGGAGCGACTGGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVCWGRP*GATGPH
Trigger: ATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCA...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLHHLWP*QTRLGH
Trigger: ATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTCAGACACCCGGAGATaGCTTCAGCCTGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCSDTRR*LQPGPP
Trigger: GGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTCAGACACCCGGAGATaGCTTCAGCCTGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLSDTRR*LQPGPP
Trigger: GGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGA...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGGCTGCCCCACAACGTaGCCTGGAAGAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHGCPTT*PGRAAW
Trigger: CCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGGCTGCCCCACAACGTaGCCTGGAAGAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPGCPTT*PGRAAW
Trigger: CCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTGCTCTCCAGGGCTCTaGGCTGCTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWCSPGL*AAQGLS
Trigger: AGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGTGCTCTCCAGGGCTCTaGGCTGCTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLCSPGL*AAQGLS
Trigger: AGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCA...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGGTGCCACACCTGGCTaGTTGGGGACGGATGTCACC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLGATPG*LGTDVT
Trigger: GGTGACATCCGTCCCCAAGCAGCCAGGTGTGGCACC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGGGCCCTGGTCCTCACTaGCTGTGTCTGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGGPGPH*LCLPRL
Trigger: GAGCCGTGGCAGACACAGGCAGTGAGGACCAGGGCC...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGGGGGCAGATCCTGCTaGGGTCCTTCAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLGGRSC*GPSGKV
Trigger: GACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTCAGCCCCTTCAGCACTaGGCTCACCCGCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVQPLQH*AHPLGQ
Trigger: CTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTG...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCAVRSD*AALTTF
Trigger: GAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGC...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCAAAGGGCTCTGAGCTaGCCTCAGGGACACGGGGCT +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLQRALS*PQGHGA
Trigger: AGCCCCGTGTCCCTGAGGCCAGCTCAGAGCCCTTTG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAATGCTGGGGCAGGCCGTaGGGAGCGACTGGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWECWGRP*GATGPH
Trigger: ATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCA...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTATGCTGGGGCAGGCCGTaGGGAGCGACTGGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVCWGRP*GATGPH
Trigger: ATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCA...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGTGCTCTCCAGGGCTCTaGGCTGCTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGCSPGL*AAQGLS
Trigger: AGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCA...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGTCCTTGGAGCCACATaGGCACGGTGCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPVLGAT*ARCPAR
Trigger: CCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGAC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGTGCTGGGTCCCTGCTaGGGAGTAGGGACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSVLGPC*GVGTGA
Trigger: AGCGCCAGTCCCTACTCCTCAGCAGGGACCCAGCAC...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTCCACAGGGGACCTCGTaGGGCCTGGAGATTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPPQGTS*GLEIQP
Trigger: GGGCTGAATCTCCAGGCCTCACGAGGTCCCCTGTGG...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTGCTGGGGTTCTGTGCTaGCTCACTGCTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVAGVLC*LTAGSR
Trigger: TCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGC...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGGTGCCACACCTGGCTaGTTGGGGACGGATGTCACC +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGGATPG*LGTDVT
Trigger: GGTGACATCCGTCCCCAAGCAGCCAGGTGTGGCACC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCCAGGGCTCTGAGCTaGTCAGGGGCTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSRALS*SGALSL
Trigger: CAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCTGGACAAAGAGCTaGCGCAGCAAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLVWTKS*RSKCRC
Trigger: GCAGCGGCACTTGCTGCGGCAGCTCTTTGTCCAGAC...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGGACAGCAGGGAAGGTaGCTAGAGTCCCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLGQQGR*LESPPE
Trigger: CTCTGGTGGGGACTCTAGGCACCTTCCCTGCTGTCC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTGTGCTGCCTCACTGCTaGCAGCAGATGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVVLPHC*QQMLLG
Trigger: CCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCAC...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCAGCCCCTTCAGCACTaGGCTCACCCGCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSQPLQH*AHPLGQ
Trigger: CTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGAGCTGGCAGATGCCTaGCTGACTGGAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLELADA*LTGTAP
Trigger: TGGGGCAGTTCCAGTCAGCCAGGCATCTGCCAGCTC...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCCCCACAACGTGACCTaGAAGAGCGGCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWPHNVT*KSGLDE
Trigger: CTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGG...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVHHLWP*QTRLGH
Trigger: ATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTG...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCCAGTACCAGGGCCCTaGTCCTCACTGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLPVPGP*SSLPVS
Trigger: AGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCCATCAATGGCTGAGTaGCCAGAAGTCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLPSMAE*PEVPLL
Trigger: CAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGCGACTGGGCCGCATTaGCCACCTTCACAGCTGACG +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHATGPH*PPSQLT
Trigger: CGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCCTCACAAGGACCAGTaGTGCCCAGCACCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGPHKDQ*CPAPLG
Trigger: GCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGG...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCCCACCCCTCCTGGTGTaGCCTGGCACTGGGAACACA +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGPPLLV*PGTGNT
Trigger: TGTGTTCCCAGTGCCAGGTCACACCAGGAGGGGTGG...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTCTTTGGCAACCTCCCTaGCTTCCACAAAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVLWQPP*LPQRLP
Trigger: GGGCAGCCTTTGTGGAAGTCAGGGAGGTTGCCAAAG...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTCTGGGGGCAGATCCTaGTGGGGTCCTTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSSGGRS*WGPSGK
Trigger: CTTGCCTGAAGGACCCCAGCAGGATCTGCCCCCAGA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGACCAGCTGATCCCCTaGTTCAGCCTTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWDQLIP*FSLWAV
Trigger: CACAGCCCAAAGGCTGAAGCAGGGGATCAGCTGGTC...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGGCCCTGGTCCTCACTaGCTGTGTCTGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPGPGPH*LCLPRL
Trigger: GAGCCGTGGCAGACACAGGCAGTGAGGACCAGGGCC...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTCAGCACCCTTGGGCATaGATCCAGCACACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSQHPWA*IQHTGQ
Trigger: CTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTG...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWKGPPP*LSLEPH
Trigger: ATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLKGPPP*LSLEPH
Trigger: ATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTT...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLAGPPC*HLATPQ
Trigger: CTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTGGGGGCAGATCCTGCTaGGGTCCTTCAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGGGRSC*GPSGKV
Trigger: GACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCC...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGGCAGCAGATGCTTCTaGGGGCAGATCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHGSRCF*GQILLG
Trigger: CCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTGGCAGCAGATGCTTCTaGGGGCAGATCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGGSRCF*GQILLG
Trigger: CCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCC...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTGGGGGCTGCTGCTaGAGGGAGAGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSTGGCC*RERNCA
Trigger: AGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGT...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGAGTGGCTGGTGGACATaGTGTTGGGCATGCACTGGG +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSGWWT*CWACTG
Trigger: CCCAGTGCATGCCCAACACCATGTCCACCAGCCACT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGAAGGGCCTTGGCCGTaGGCAGTGGCTGGTGGACAT +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGEGPWP*AVAGGH
Trigger: ATGTCCACCAGCCACTGCCCACGGCCAAGGCCCTTC...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGAAGGGCCTTGGCCGTaGGCAGTGGCTGGTGGACAT +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPEGPWP*AVAGGH
Trigger: ATGTCCACCAGCCACTGCCCACGGCCAAGGCCCTTC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCCCCACAACGTGACCTaGAAGAGCGGCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSPHNVT*KSGLDE
Trigger: CTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTCTCTGCCCTGGGAACTaGTTCCGACAGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVLCPGN*FRQKLP
Trigger: AGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAG...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCTTGGCCACTGTGTCTaGACAAAGAGCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLLGHCV*TKSCRS
Trigger: GCTGCGGCAGCTCTTTGTCCAGACACAGTGGCCAAG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCCTTGGCCACTGTGTCTaGACAAAGAGCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLLGHCV*TKSCRS
Trigger: GCTGCGGCAGCTCTTTGTCCAGACACAGTGGCCAAG...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTACACCGGCCAGACCCTaGGGTGGGAGCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHITPARP*GGSHGH
Trigger: GTGCCCGTGGCTCCCACCCCAGGGTCTGGCCGGTGT...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCATCCCCCACTGCCACTaGGCTAGTGTGGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCIPHCH*ASVGVS
Trigger: AGACACACCCACACTAGCCCAGTGGCAGTGGGGGAT...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGAGCCCTGGTGTGGCATaGCCCAACCATGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWSPGVA*PNHVPA
Trigger: GGCAGGGACATGGTTGGGCCATGCCACACCAGGGCT...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCCCATGCCGATCAGGCTaGTCTCGAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLPCRSG*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGACCAGCCTGATCGGCATGG...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCCTCAGGGGACCAGCTaGTCCCCTGCTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGPQGTS*SPASAF
Trigger: AAAGGCTGAAGCAGGGGATCAGCTGGTCCCCTGAGG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCCATCAATGGCTGAGTaGCCAGAAGTCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGPSMAE*PEVPLL
Trigger: CAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGCGACTGGGCCGCATTaGCCACCTTCACAGCTGACG +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRATGPH*PPSQLT
Trigger: CGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCTCCTCTTCCTCCTaGGAGGCATTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVASSSS*EAFSSA
Trigger: GGCTGAGGAGAATGCCTCTCAGGAGGAAGAGGAGGC...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGCCTCCTCTTCCTCCTaGGAGGCATTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPASSSS*EAFSSA
Trigger: GGCTGAGGAGAATGCCTCTCAGGAGGAAGAGGAGGC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRGCQGQ*PVALVG
Trigger: TCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCAGCAAACCACTGCTTaGCCTGCTGGGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWQQTTA*PAGSSS
Trigger: AGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTG...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTGTGTCAAAGGGCTCTaGGCTGGCCTCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGCVKGL*AGLRDT
Trigger: CGTGTCCCTGAGGCCAGCTCAGAGCCCTTTGACACA...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGTCTGTTTCGAGCTaGCGTCCAGCCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWQSVSS*RPAWGL
Trigger: GAGTCCCCAGGCTGGACGTCAGCTCGAAACAGACTG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCCAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTGTGTGCACGCGCACATaGACACACGTTTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVVCTRT*THVSSQ
Trigger: CTGGCTTGAAACGTGTGTTCATGTGCGCGTGCACAC...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTGGTCTCGAACTCCTaGCCTCAGGTGATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPLVSNS*PQVIRL
Trigger: GAGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCCTCCCGGGTTCAAGTaGTTCTCCTTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSPPGFK*FSFLSL
Trigger: GAGGCTGAGGAAGGAGAATCACTTGAACCCGGGAGG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGTGCTGGGTCCCTGCTaGGGAGTAGGGACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHVLGPC*GVGTGA
Trigger: AGCGCCAGTCCCTACTCCTCAGCAGGGACCCAGCAC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCCGGGCTGGGCCTCCATaGTGGCATCTTGCAACACCA +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGRAGPP*WHLATP
Trigger: TGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCG...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGTCTGTGCTGCCTCACTaGTGGCAGCAGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLSVLPH*WQQMLL
Trigger: CAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGA...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGGQECW*SQGCSA
Trigger: AGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGPLGQE*WCSQGC
Trigger: GCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGG...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTCCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRPLGQE*WCSQGC
Trigger: GCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGG...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTTCCAGGGCTCTGAGCTaGTCAGGGGCTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSSRALS*SGALSL
Trigger: CAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGA...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGTCCAGGGCTCTGAGCTaGTCAGGGGCTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVSRALS*SGALSL
Trigger: CAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGA...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCATCCAGGGCTCTGAGCTaGTCAGGGGCTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPSRALS*SGALSL
Trigger: CAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGA...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGCTGACTTTGCGCTCTaGCAAGATATGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLADFAL*QDMAAG
Trigger: CCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCGCAGCAAGTGCCGCTaGTGGGCAGTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGRSKCR*WAVFLQ
Trigger: CTGCAAAAAGACTGCCCAGCAGCGGCACTTGCTGCG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGCTGCCGCAGCAAGTaGCGCTGCTGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVSCRSK*RCWAVF
Trigger: AAAGACTGCCCAGCAGCGGCACTTGCTGCGGCAGCT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCAGCTGCCGCAGCAAGTaGCGCTGCTGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGSCRSK*RCWAVF
Trigger: AAAGACTGCCCAGCAGCGGCACTTGCTGCGGCAGCT...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTAGCTGCCGCAGCAAGTaGCGCTGCTGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGSCRSK*RCWAVF
Trigger: AAAGACTGCCCAGCAGCGGCACTTGCTGCGGCAGCT...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGTCTGGACAAAGAGCTaGCGCAGCAAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGVWTKS*RSKCRC
Trigger: GCAGCGGCACTTGCTGCGGCAGCTCTTTGTCCAGAC...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGTCTGGACAAAGAGCTaGCGCAGCAAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPVWTKS*RSKCRC
Trigger: GCAGCGGCACTTGCTGCGGCAGCTCTTTGTCCAGAC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGAACCACTGCTTGACCTaGTGGGAGCTCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWNHCLT*WELIWV
Trigger: GACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACCTCACTGCCTGTGTCTaGCACGGCTCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHLTACV*HGSGLL
Trigger: GAGGAGACCAGAGCCGTGGCAGACACAGGCAGTGAG...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGCCCAGGAGGTGTCTGTaGCCACGAAGCCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGPRRCL*PRSLVL
Trigger: AAGTACCAGGCTTCGTGGGCACAGACACCTCCTGGG...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGCTGGGCCGCCCCAGCTaGCTAGTGCACTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGLGRPS*LVHWCP
Trigger: GGGACACCAGTGCACTAGGCAGCTGGGGCGGCCCAG...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTACATACCTGGCTGCTaGCATCCCACATCCCCCACT +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVYIPGC*HPTSPT
Trigger: AGTGGGGGATGTGGGATGGCAGCAGCCAGGTATGTA...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAACCCCACCAGAGCGGCTaGCTTCCTCCCTTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEPHQSG*LPPFAQ
Trigger: CTGAGCGAAGGGAGGAAGGCAGCCGCTCTGGTGGGG...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPKVSAG*ASMLAS
Trigger: AGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTT...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGTGCTGCCTCACTGCTaGCAGCAGATGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPVLPHC*QQMLLG
Trigger: CCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCAC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCTGCCTCACTGCTaGCAGCAGATGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHVLPHC*QQMLLG
Trigger: CCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCAC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGAGCCATCAGTACTGCTaGGGTTCTGTGCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSHQYC*GSVLPH
Trigger: GTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATG +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWRSTQS*LPRSDM
Trigger: CATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACG...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCTTGGCCGTGGGCAGTaGCTGGTGGACATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGLGRGQ*LVDMVL
Trigger: CAACACCATGTCCACCAGCCACTGCCCACGGCCAAG...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCAGAGCTCGGCTTTGGTaGGGTAGGGGAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLRARLW*GRGTCG
Trigger: TCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCT...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGAGAGCTCGGCTTTGGTaGGGTAGGGGAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWRARLW*GRGTCG
Trigger: TCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTAGAGCTCGGCTTTGGTaGGGTAGGGGAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVRARLW*GRGTCG
Trigger: TCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCT...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCCTGGAAGAGCGGCCTaGATGAGATGCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLPGRAA*MRCWTL
Trigger: CAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCCCCCACAACGTGACCTaGAAGAGCGGCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGPHNVT*KSGLDE
Trigger: CTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGG...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRAVRSD*AALTTF
Trigger: GAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVGGLLV*LLSECR
Trigger: CCTGCATTCCGACAACAGCCACACTAGCAACCCACC...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLGGLLV*LLSECR
Trigger: CCTGCATTCCGACAACAGCCACACTAGCAACCCACC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTAGCAAGTGCCGCTGCTaGGCAGTCTTTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVSKCRC*AVFLQL
Trigger: GAGCTGCAAAAAGACTGCCCAGCAGCGGCACTTGCT...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCTTGGCCACTGTGTCTaGACAAAGAGCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSLGHCV*TKSCRS
Trigger: GCTGCGGCAGCTCTTTGTCCAGACACAGTGGCCAAG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTGTCTGCCACGGCTCTaGTCTCCTCCCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWCLPRL*SPPPFS
Trigger: AGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGACA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACAAAGGGCTCTGAGCTaGCCTCAGGGACACGGGGCT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRQRALS*PQGHGA
Trigger: AGCCCCGTGTCCCTGAGGCCAGCTCAGAGCCCTTTG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGAGCCACGGGCACTCTaGGTGTTCTGCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPEPRAL*VFCQGS
Trigger: AGATCCCTGGCAGAACACCCAGAGTGCCCGTGGCTC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCTGGTACTTGTGGCTTaGCACTCTGGGAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLLVLVA*HSGKQV
Trigger: CACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTGTGCCCACGAAGCCTaGTACTTGTGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWCAHEA*YLWLGT
Trigger: AGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGACAGGGCTACATACCTaGCTGCTGCCATCCCACATC +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWTGLHT*LLPSHI
Trigger: GATGTGGGATGGCAGCAGCCAGGTATGTAGCCCTGT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGTGGTCTGGGCAGGCTaGCTGAGAGAGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSVVWAG*LREVCA
Trigger: AGCACAGACCTCTCTCAGCCAGCCTGCCCAGACCAC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCTGAGGAGTAGGGACTaGCGCTCCTCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGLRSRD*RSSLLL
Trigger: CAGCAGGAGTGAGGAGCGCCAGTCCCTACTCCTCAG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGGCCATGGCAGGAGATaGGACCCTCTTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWGHGRR*DPLAEF
Trigger: AAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCC...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGAGGGAAGGGAGAGGCTaGGAACTCAGTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLREGRG*ELSDQE
Trigger: TTCCTGGTCACTGAGTTCCCAGCCTCTCCCTTCCCT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421422.1
3UTR CAA 72 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESG*ALPRGRRFPRL
Trigger: CAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTCTTGCTGGCCATGGTaGCAATCACTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVSCWPW*QSLGDQ
Trigger: CTGATCACCCAGTGATTGTCACCATGGCCAGCAAGA...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCTGGCTTCCCCGGAGTaGCATGTGGCATTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGLASPE*HVALCK
Trigger: CTTGCACAATGCCACATGTCACTCCGGGGAAGCCAG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTACCGTAATTGTGGGCTaGGGCACAGACTGGATGACT +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVTVIVG*GTDWMT
Trigger: AGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGT...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAG +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPEERPG*DAGHCQ
Trigger: CTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGGCTGCCCCACAACGTaGCCTGGAAGAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGGCPTT*PGRAAW
Trigger: CCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTTGGCCATCAATGGCTaGGTGACCAGAAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSLAING*VTRSPP
Trigger: AGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPDPSGP*WSHSPG
Trigger: ACCAGGACTATGACTCCATCATGGCCCAGACGGGTC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGDPSGP*WSHSPG
Trigger: ACCAGGACTATGACTCCATCATGGCCCAGACGGGTC...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVGCQGQ*PVALVG
Trigger: TCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACC...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGATGTGTCAAAGGGCTCTaGGCTGGCCTCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRCVKGL*AGLRDT
Trigger: CGTGTCCCTGAGGCCAGCTCAGAGCCCTTTGACACA...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHPDCGR*GAPVTQ
Trigger: CTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCCTCACAAGGACCAGTaGTGCCCAGCACCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHPHKDQ*CPAPLG
Trigger: GCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAACCTCACAAGGACCAGTaGTGCCCAGCACCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEPHKDQ*CPAPLG
Trigger: GCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGG...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTTGCCCCCAAACCCTTaGGTACCTCCTACAATGTCC +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCLPPNP*VPPTMS
Trigger: GGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCACTGCTGGCAGCAGATaGTTCTGGGGGCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGTAGSR*FWGQIL
Trigger: CAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGT...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRTAGVL*CLTAGS
Trigger: GCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGT...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTGGTGCTCTCAGGGATaGTCTGCTCCACAACCACAT +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLWCSQG*SAPQPH
Trigger: ATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCA...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGTGCAGAGCTGGCAGATaGCTGGCTGACTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWCRAGR*LADWNC
Trigger: GCAGTTCCAGTCAGCCAGGCATCTGCCAGCTCTGCA...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCGCGGCCTGGATGAGATaGTGGACATTGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGAAWMR*WTLPAL
Trigger: CAGTGCTGGCAATGTCCAGCATCTCATCCAGGCCGC...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGGTGCCACACCTGGCTaGTTGGGGACGGATGTCACC +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHGATPG*LGTDVT
Trigger: GGTGACATCCGTCCCCAAGCAGCCAGGTGTGGCACC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWCSTSL*PGNWFR
Trigger: TCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWFCSSL*LGAALP
Trigger: TGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVFCSSL*LGAALP
Trigger: TGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAA...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGCAGCAAGTGCCGCTaGTGGGCAGTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWRSKCR*WAVFLQ
Trigger: CTGCAAAAAGACTGCCCAGCAGCGGCACTTGCTGCG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGCCCTGGTGGGAAGTTaGCTCGCTTATAGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLALVGS*LAYSLR
Trigger: ACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGCAACTCTTCAGCCAGTaGATGCAGGGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGQLFSQ*MQGSGG
Trigger: ACCTCCAGAGCCCTGCATGCACTGGCTGAAGAGTTG...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGTACATACCTGGCTGCTaGCATCCCACATCCCCCACT +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGYIPGC*HPTSPT
Trigger: AGTGGGGGATGTGGGATGGCAGCAGCCAGGTATGTA...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTACAACCGGATTGCTGTaGTGGGTCCCTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGTTGLL*WVPAEE
Trigger: CTCCTCAGCAGGGACCCAGCACAGCAATCCGGTTGT...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRKVSAG*ASMLAS
Trigger: AGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTT...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGCCTCACCCACAGGCTaGCTAGGGACATTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPASPTG*LGTFSL
Trigger: CAAGGAGAATGTCCCTAGCCAGCCTGTGGGTGAGGC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTGCCTCACCCACAGGCTaGCTAGGGACATTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGASPTG*LGTFSL
Trigger: CAAGGAGAATGTCCCTAGCCAGCCTGTGGGTGAGGC...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGAGCTGGCAGATGCCTaGCTGACTGGAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRELADA*LTGTAP
Trigger: TGGGGCAGTTCCAGTCAGCCAGGCATCTGCCAGCTC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGGCCAGCTGGCAAAACTaGCACTGTTCCTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGASWQN*HCSYQG
Trigger: CCCCTGATAGGAACAGTGCCAGTTTTGCCAGCTGGC...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTAGTGGCTGGTGGACATaGTGTTGGGCATGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPSGWWT*CWACTG
Trigger: CCCAGTGCATGCCCAACACCATGTCCACCAGCCACT...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGAGCTCGGCTTTGGTaGGGTAGGGGAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGRARLW*GRGTCG
Trigger: TCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCT...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGSRARL*WGRGTC
Trigger: ACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCT...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCCCTGCTTCAGCCTTTaGGCTGTGAACCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLPCFSL*AVNQIL
Trigger: CAAGATCTGGTTCACAGCCCAAAGGCTGAAGCAGGG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGCCTGGATGAGATGCTaGACATTGCCAGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHAWMRC*TLPALA
Trigger: CGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCCCCCACAACGTGACCTaGAAGAGCGGCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSPHNVT*KSGLDE
Trigger: CTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGG...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCCCCATTGGCCATCAATaGCTGAGTGACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLPIGHQ*LSDQKS
Trigger: GGACTTCTGGTCACTCAGCCATTGATGGCCAATGGG...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTAATGGGTGCCACACCTaGCTGCTTGGGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSNGCHT*LLGDGC
Trigger: ACATCCGTCCCCAAGCAGCCAGGTGTGGCACCCATT...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTCTCTGCCCTGGGAACTaGTTCCGACAGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSLCPGN*FRQKLP
Trigger: AGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAG...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTCTGCCCTGGGAACTaGTTCCGACAGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPLCPGN*FRQKLP
Trigger: AGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGCAGGTATCATCGCTCTaGAGCCCTTCAAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGQVSSL*SPSSSG
Trigger: GCCGGAACTTGAAGGGCTCCAGAGCGATGATACCTG...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGG +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVRDLGR*GEGHLW
Trigger: CCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGTTACCTCAGGGACCTTaGACGATGGGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLLPQGP*TMGRRT
Trigger: TGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAA...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTCGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVRLAEG*VASVAV
Trigger: AACAGCCACACTAGCAACCCACCCTTCTGCCAAACG...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCCAGCGCACCACCTCTaGCCGTGGCAGACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGPAHHL*PWQTRL
Trigger: CAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGCTGGTACTTGTGGCTTaGCACTCTGGGAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGLVLVA*HSGKQV
Trigger: CACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAG...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGCCACTGGGCTAGTGTaGGTGTGTCTCTGTGCACGA +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSATGLV*VCLCAR
Trigger: TCGTGCACAGAGACACACCCACACTAGCCCAGTGGC...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCATCCATCCCTGGAGCTaGGGGTGGGACCAATCCTTC +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGIHPWS*GWDQSF
Trigger: GAAGGATTGGTCCCACCCCCAGCTCCAGGGATGGAT...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS-3UTR TCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCGTGACAATCACTGGGTaGTCAGCAGTTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCVTITG*SAVESL
Trigger: CAAGCTCTCAACTGCTGATCACCCAGTGATTGTCAC...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTCTTGCTGGCCATGGTaGCAATCACTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSSCWPW*QSLGDQ
Trigger: CTGATCACCCAGTGATTGTCACCATGGCCAGCAAGA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTTCCCCGGAGTaGCATGTGGCATTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRLASPE*HVALCK
Trigger: CTTGCACAATGCCACATGTCACTCCGGGGAAGCCAG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCCTGGCTTCCCCGGAGTaGCATGTGGCATTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSLASPE*HVALCK
Trigger: CTTGCACAATGCCACATGTCACTCCGGGGAAGCCAG...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTACCTCAGGGGACCAGCTaGTCCCCTGCTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVPQGTS*SPASAF
Trigger: AAAGGCTGAAGCAGGGGATCAGCTGGTCCCCTGAGG...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTGGCCATCAATGGCTaGGTGACCAGAAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGLAING*VTRSPP
Trigger: AGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAA...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCCTCCTCTTCCTCCTaGGAGGCATTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVASSSS*EAFSSA
Trigger: GGCTGAGGAGAATGCCTCTCAGGAGGAAGAGGAGGC...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTGCCAGTTTGTTTaGCTCATCATCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWLCQFV*LIILRV
Trigger: GACCCTGAGGATGATGAGTCAAACAAACTGGCAGAG...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTCTCTGCCAGTTTGTTTaGCTCATCATCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVLCQFV*LIILRV
Trigger: GACCCTGAGGATGATGAGTCAAACAAACTGGCAGAG...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCCTTTGTGAACTGCTGTaGGCTCACCAGTACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSLCELL*AHQYQG
Trigger: GCCCTGGTACTGGTGAGCTCACAGCAGTTCACAAAG...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCVVSKK*AELQVD
Trigger: GTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCAC...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTTTCCACCTGAAAGATaGGCTAGTGCCCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSFPPER*ASAHGW
Trigger: CCAGCCATGGGCACTAGCTCATCTTTCAGGTGGAAA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGTTGCCCTGGAAGACTTaGCTATGTGGGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLLPWKT*LCGPSC
Trigger: ACATGAAGGCCCACATAGTCAAGTCTTCCAGGGCAA...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp AACCAAGTGCAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCAGGTCCGTGTCTGGAGTaGGGGGAACTGAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NQVQTLGEFRDHLVSPAPGPCLE*GELSPA
Trigger: AGCAGGGCTCAGTTCCCCTCACTCCAGACACGGACC...TGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTAGTGCAGACGCTCGGTaGGTTCAGAGACCACTTGGT +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRSADAR*VQRPLG
Trigger: ACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACT...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGTGTGCACGCGCACATaGACACACGTTTCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGVCTRT*THVSSQ
Trigger: CTGGCTTGAAACGTGTGTTCATGTGCGCGTGCACAC...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTCTGTGCTGCCTCACTaGTGGCAGCAGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRSVLPH*WQQMLL
Trigger: CAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCTAAAGTGCTCCGATaGCCATTGGCCAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSKVLR*PLASVE
Trigger: CTCTACACTGGCCAATGGGCATCGGAGCACTTTAGA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTAGAGGAACTGTGCTATaGCAGCTGGCAAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVRGTVL*QLAKLA
Trigger: TGCCAGTTTTGCCAGCTGGCATAGCACAGTTCCTCT...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCTGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGWLLSE*RLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCA...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTAGGAAGAGGGTTTTGTaGAAAACTGCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVRKRVL*KTALQG
Trigger: GCCCTGGAGAGCAGTTTTGCACAAAACCCTCTTCCT...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGCTGACTTTGCGCTCTaGCAAGATATGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSADFAL*QDMAAG
Trigger: CCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGGCTGACTTTGCGCTCTaGCAAGATATGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWADFAL*QDMAAG
Trigger: CCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGC...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCTGACTTTGCGCTCTaGCAAGATATGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRADFAL*QDMAAG
Trigger: CCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGC...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCTLPGS*SASLFD
Trigger: GTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGT...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLTLPGS*SASLFD
Trigger: GTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGT...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGFCSSL*LGAALP
Trigger: TGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAA...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSFCSSL*LGAALP
Trigger: TGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGAGTCATAGTCCTGGTTaGTTGGCCACTGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLSHSPG*LATVSG
Trigger: TCCAGACACAGTGGCCAAGCAACCAGGACTATGACT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCTTCAGTGCGTACCTaGTATCTCCAAACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSSVRT*YLQTSA
Trigger: TGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGAACCACTGCTTGACCTaGTGGGAGCTCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWNHCLT*WELIWV
Trigger: GACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTT...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTTCTCAGCAAACCACTaGTTGACCTGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSFSANH*LTCWEL
Trigger: GAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGGCCCTGGTCCTCACTaGCTGTGTCTGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGGPGPH*LCLPRL
Trigger: GAGCCGTGGCAGACACAGGCAGTGAGGACCAGGGCC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCCATCCCTTTGTGAACTaGTGTGAGCTCACCAGTACC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLHPFVN*CELTST
Trigger: GGTACTGGTGAGCTCACAGCAGTTCACAAAGGGATG...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGACCAAGTTTCTCAACTaGACACGCCAGATGCGCGTT +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLTKFLN*TRQMRV
Trigger: AACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTCTGGGCCGCCCCAGCTaGCTAGTGCACTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMALGRPS*LVHWCP
Trigger: GGGACACCAGTGCACTAGGCAGCTGGGGCGGCCCAG...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCTGGGCCGCCCCAGCTaGCTAGTGCACTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQILGRPS*LVHWCP
Trigger: GGGACACCAGTGCACTAGGCAGCTGGGGCGGCCCAG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCCTCTCCTGCAAGTTaGCTTTATCCACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSSPAS*LYPLGV
Trigger: CACCCCAAGTGGATAAAGGCAACTTGCAGGAGAGGA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCACGAGAACAACCGGATTaGTGTGCTGGGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPREQPD*CAGSLL
Trigger: CAGCAGGGACCCAGCACAGCAATCCGGTTGTTCTCG...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTCTCCTGACAGCAGACTaGTCAACAGTCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPLLTAD*STVTPQ
Trigger: CTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAG...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGCCATCAGTACTGCTaGGGTTCTGTGCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVSHQYC*GSVLPH
Trigger: GTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCCCCGGAGTGACATGTaGCATTGTGCAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVPRSDM*HCARKA
Trigger: GGCTTTCCTTGCACAATGCCACATGTCACTCCGGGG...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACCGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATG +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHRSTQS*LPRSDM
Trigger: CATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACG...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATG +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVRSTQS*LPRSDM
Trigger: CATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACG...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGAACCACATGATTGTCTaGCTTGGCCACGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLNHMIV*LGHVPH
Trigger: GTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCTAGGTCAGGAGTGCTaGTGCTCTCAGGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGLGQEC*CSQGCS
Trigger: AGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAG...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCCATTGATGAAGGAATaGTCCCCCTCTCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSPLMKE*SPSLTS
Trigger: GGAGGTGAGAGAGGGGGACCATTCCTTCATCAATGG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCCATTGATGAAGGAATaGTCCCCCTCTCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGPLMKE*SPSLTS
Trigger: GGAGGTGAGAGAGGGGGACCATTCCTTCATCAATGG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSSRARL*WGRGTC
Trigger: ACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCT...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGGACATTGCCAGCACTaGCGACGAGTGGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGGHCQH*RRVGYL
Trigger: TAAATACCCCACTCGTCGCCAGTGCTGGCAATGTCC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGCCCTCCTGTACCCTCTaGCTGCCCCACAACGTGACC +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVPSCTL*LPHNVT
Trigger: GGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGG...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGACCCTCCTGTACCCTCTaGCTGCCCCACAACGTGACC +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRPSCTL*LPHNVT
Trigger: GGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGG...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGAVRSD*AALTTF
Trigger: GAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGC...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACAGGTATCATCGCTCTaGAGCCCTTCAAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPQVSSL*SPSSSG
Trigger: GCCGGAACTTGAAGGGCTCCAGAGCGATGATACCTG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACCAGGTATCATCGCTCTaGAGCCCTTCAAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHQVSSL*SPSSSG
Trigger: GCCGGAACTTGAAGGGCTCCAGAGCGATGATACCTG...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCTTACCTCAGGGACCTTaGACGATGGGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGLPQGP*TMGRRT
Trigger: TGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAA...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGAGACCCTTAGCTCACTaGCCAAATCCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLRPLAH*PNPLLH
Trigger: GTGGAGAAGAGGATTTGGCCAGTGAGCTAAGGGTCT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCACAGGCACCCAGCCCTaGAATCTCGTTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGTGTQP*NLVPAI
Trigger: AATGGCAGGAACGAGATTCCAGGGCTGGGTGCCTGT...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTAGCAAGTGCCGCTGCTaGGCAGTCTTTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRSKCRC*AVFLQL
Trigger: GAGCTGCAAAAAGACTGCCCAGCAGCGGCACTTGCT...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCAAGGCCCTGGCAAGCCATCCAACTAGGGCGTTCTTTTTCAGGAACCCAAGACACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PKALASHPTRAFFFRNPRHHLWP*QTRLGH
Trigger: ATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTG...TCTTGGGTTCCTGAAAAAGAACGCCCTAGTTGGATGGCTTGCCAGGGCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCCAGCGCACCACCTCTaGCCGTGGCAGACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTPAHHL*PWQTRL
Trigger: CAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCCAGCGCACCACCTCTaGCCGTGGCAGACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIPAHHL*PWQTRL
Trigger: CAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCACAAAGGGCTCTGAGCTaGCCTCAGGGACACGGGGCT +
Preference number: 4 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPQRALS*PQGHGA
Trigger: AGCCCCGTGTCCCTGAGGCCAGCTCAGAGCCCTTTG...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGAGCCACGGGCACTCTaGGTGTTCTGCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHEPRAL*VFCQGS
Trigger: AGATCCCTGGCAGAACACCCAGAGTGCCCGTGGCTC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGAAGCCTGGTACTTGTaGCTTGGCACTCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPEAWYL*LGTLGS
Trigger: GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCCCTTGCCCTCTCTCTaGGGTCTTCTAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGPLPSL*GLLALS
Trigger: TGACAGTGCTAGAAGACCCCAGAGAGAGGGCAAGGG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCCCTTGCCCTCTCTCTaGGGTCTTCTAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVPLPSL*GLLALS
Trigger: TGACAGTGCTAGAAGACCCCAGAGAGAGGGCAAGGG...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCCTTGCCCTCTCTCTaGGGTCTTCTAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWPLPSL*GLLALS
Trigger: TGACAGTGCTAGAAGACCCCAGAGAGAGGGCAAGGG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTCACCAGCCCTGGTGTaGCATGGCCCAACCATGTCC +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHSPALV*HGPTMS
Trigger: GGACATGGTTGGGCCATGCCACACCAGGGCTGGTGA...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCCAGGGTCTTGGTCCATaGGTTAGAATCACTGACTGG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLQGLGP*VRITDW
Trigger: CCAGTCAGTGATTCTAACCCATGGACCAAGACCCTG...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCGTGACAATCACTGGGTaGTCAGCAGTTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSVTITG*SAVESL
Trigger: CAAGCTCTCAACTGCTGATCACCCAGTGATTGTCAC...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGTGACAATCACTGGGTaGTCAGCAGTTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGVTITG*SAVESL
Trigger: CAAGCTCTCAACTGCTGATCACCCAGTGATTGTCAC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTCCTCAGGGGACCAGCTaGTCCCCTGCTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHIPQGTS*SPASAF
Trigger: AAAGGCTGAAGCAGGGGATCAGCTGGTCCCCTGAGG...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAG +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVEERPG*DAGHCQ
Trigger: CTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTC...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCGGTATCTACGATCACTaGACCATTTCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSGIYDH*TISAPL
Trigger: GAGAGGTGCGGAAATGGTTCAGTGATCGTAGATACC...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTGTATTTGGTTGGTGTaGAGTCAGGAGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSCIWLV*SQESGA
Trigger: GGCACCAGACTCCTGACTTCACACCAACCAAATACA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGGCCTCCTCTTCCTCCTaGGAGGCATTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGASSSS*EAFSSA
Trigger: GGCTGAGGAGAATGCCTCTCAGGAGGAAGAGGAGGC...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTGCCATTGGCTTCAGTaGCCCTCAGGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGCHWLQ*PSGSSG
Trigger: ACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCA...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp ACAGTCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TVTPQSYCPEVRPQGTRLGCQGQ*PVALVG
Trigger: TCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACC...AAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGKASLT*NVAGHH
Trigger: GTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTT...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGGTGGAGAAAGGGCTCTaGAAACCGCAGTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWVEKGL*KPQWSK
Trigger: CTTTGACCACTGCGGTTTTCAGAGCCCTTTCTCCAC...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGTGGAGAAAGGGCTCTaGAAACCGCAGTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPVEKGL*KPQWSK
Trigger: CTTTGACCACTGCGGTTTTCAGAGCCCTTTCTCCAC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSVVSKK*AELQVD
Trigger: GTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCAC...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTGTCCTTGGAGCCACATaGGCACGGTGCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAVLGAT*ARCPAR
Trigger: CCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGAC...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGTCCTTGGAGCCACATaGGCACGGTGCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFVLGAT*ARCPAR
Trigger: CCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGAC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCACAGGAGAAAGGCTTaGGCTCCACAACTGCCCATT +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGHRRKA*APQLPI
Trigger: AATGGGCAGTTGTGGAGCTCAAGCCTTTCTCCTGTG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAACTGCTGGCAGCAGATaGTTCTGGGGGCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVTAGSR*FWGQIL
Trigger: CAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGT...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCTGGTGCTCTCAGGGATaGTCTGCTCCACAACCACAT +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGWCSQG*SAPQPH
Trigger: ATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCA...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHGQECW*SQGCSA
Trigger: AGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGGTAATGATGATTTCTaGCTGTCCATCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWGNDDF*LSISPF
Trigger: GAAGGGGCTGATGGACAGGCAGAAATCATCATTACC...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTATGCAGAGCTGGCAGATaGCTGGCTGACTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVCRAGR*LADWNC
Trigger: GCAGTTCCAGTCAGCCAGGCATCTGCCAGCTCTGCA...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGAGGGAGAGGAACTGTaGTATGCCAGCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGEGEEL*YASWQN
Trigger: GTTTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTC...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTGTACGTTGGAATGCTaGTCAGGGGGATCATCACTT +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLCTLEC*SGGSSL
Trigger: AAGTGATGATCCCCCTGAGCAGCATTCCAACGTACA...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCACACAGTGTTAATGGGTaGCACACCTGGCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPHSVNG*HTWLLG
Trigger: CCCAAGCAGCCAGGTGTGGCACCCATTAACACTGTG...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVLAVLQ*VPAISK
Trigger: TTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAA...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGCCCTGGTGGGAAGTTaGCTCGCTTATAGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPALVGS*LAYSLR
Trigger: ACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTTCTCAGCAAACCACTaGTTGACCTGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGFSANH*LTCWEL
Trigger: GAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAA...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCCTCACTGCCTGTGTCTaGCACGGCTCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCLTACV*HGSGLL
Trigger: GAGGAGACCAGAGCCGTGGCAGACACAGGCAGTGAG...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGACTCACTGCCTGTGTCTaGCACGGCTCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRLTACV*HGSGLL
Trigger: GAGGAGACCAGAGCCGTGGCAGACACAGGCAGTGAG...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGCACTCTGGGTGTTCTaGCAGGGATCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRALWVF*QGSLHA
Trigger: TGCATGCAGAGATCCCTGGCAGAACACCCAGAGTGC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCCAACTCTTCAGCCAGTaGATGCAGGGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSQLFSQ*MQGSGG
Trigger: ACCTCCAGAGCCCTGCATGCACTGGCTGAAGAGTTG...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCACCTGCGTGATGACTaGCTCCCTCATCATCGCTTT +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWHLRDD*LPHHRF
Trigger: AAAGCGATGATGAGGGAGGCAGTCATCACGCAGGTG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCGTGGGTGTGTCTCTGTaGACGACTGGCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSVGVSL*TTGWIQ
Trigger: CTGAATCCAGCCAGTCGTGCACAGAGACACACCCAC...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGGCTGAGAGAGGTCTGTaGTCTCAGGTAAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGAERGL*SQVKGE
Trigger: CTCTCCTTTTACCTGAGAGCACAGACCTCTCTCAGC...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTCCCCACCAGAGCGGCTaGCTTCCTCCCTTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAPHQSG*LPPFAQ
Trigger: CTGAGCGAAGGGAGGAAGGCAGCCGCTCTGGTGGGG...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCACCACAGTCTTCACTaGGATCATGCATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGHHSLH*DHAWCG
Trigger: ACCACACCATGCATGATCCCAGTGAAGACTGTGGTG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAG +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEAGPPC*HLATPQ
Trigger: CTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGC...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGGGGGCAGATCCTGCTaGGGTCCTTCAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGGGRSC*GPSGKV
Trigger: GACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGAACCACATGATTGTCTaGCTTGGCCACGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGNHMIV*LGHVPH
Trigger: GTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTT...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCATTGATGAAGGAATaGTCCCCCTCTCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWPLMKE*SPSLTS
Trigger: GGAGGTGAGAGAGGGGGACCATTCCTTCATCAATGG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCCCATTGATGAAGGAATaGTCCCCCTCTCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSPLMKE*SPSLTS
Trigger: GGAGGTGAGAGAGGGGGACCATTCCTTCATCAATGG...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGCCAGCTGGCAAAACTaGCACTGTTCCTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRASWQN*HCSYQG
Trigger: CCCCTGATAGGAACAGTGCCAGTTTTGCCAGCTGGC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTCTGTGCTATGCCAGCTaGCAAAACTGGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSLCYAS*QNWHCS
Trigger: GGAACAGTGCCAGTTTTGCCAGCTGGCATAGCACAG...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCTGTGCTATGCCAGCTaGCAAAACTGGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGLCYAS*QNWHCS
Trigger: GGAACAGTGCCAGTTTTGCCAGCTGGCATAGCACAG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSGCIVR*NAAQGD
Trigger: ATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPGCIVR*NAAQGD
Trigger: ATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCC...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCCCTGCTTCAGCCTTTaGGCTGTGAACCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGPCFSL*AVNQIL
Trigger: CAAGATCTGGTTCACAGCCCAAAGGCTGAAGCAGGG...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCCCTGCTTCAGCCTTTaGGCTGTGAACCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGPCFSL*AVNQIL
Trigger: CAAGATCTGGTTCACAGCCCAAAGGCTGAAGCAGGG...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGCCTGGATGAGATGCTaGACATTGCCAGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHAWMRC*TLPALA
Trigger: CGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCCCATTGGCCATCAATaGCTGAGTGACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGPIGHQ*LSDQKS
Trigger: GGACTTCTGGTCACTCAGCCATTGATGGCCAATGGG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATAATGGGTGCCACACCTaGCTGCTTGGGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHNGCHT*LLGDGC
Trigger: ACATCCGTCCCCAAGCAGCCAGGTGTGGCACCCATT...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGAVRSD*AALTTF
Trigger: GAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCTCTGCCCTGGGAACTaGTTCCGACAGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHLCPGN*FRQKLP
Trigger: AGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGAACTTCGCTCTGCCCTaGGAACTGGTTCCGACAGAA +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWNFALP*ELVPTE
Trigger: TTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTT...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTAACTTCGCTCTGCCCTaGGAACTGGTTCCGACAGAA +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPNFALP*ELVPTE
Trigger: TTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTT...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLVKSGV*CQDCRL
Trigger: CAAACGACAATCTTGGCACCAGACTCCTGACTTCAC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCCGCTCTGCCAAGATATaGCTGCTGGGCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSRSAKI*LLGISR
Trigger: TCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCG...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAACAGGCACCCAGCCCTaGAATCTCGTTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPTGTQP*NLVPAI
Trigger: AATGGCAGGAACGAGATTCCAGGGCTGGGTGCCTGT...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGATGTCTGCCACGGCTCTaGTCTCCTCCCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRCLPRL*SPPPFS
Trigger: AGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGACA...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAAGCTGCCTAGTGCACTaGTGTCCCTCCAACACAGGC +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWESCLVH*CPSNTG
Trigger: GCCTGTGTTGGAGGGACACCAGTGCACTAGGCAGCT...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAACAAACCCCAAGGCCCTaGCAAGCCATCCAACTAGGG +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEQTPRP*QAIQLG
Trigger: CCCTAGTTGGATGGCTTGCCAGGGCCTTGGGGTTTG...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCGTGGTCTGGGCAGGCTaGCTGAGAGAGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLVVWAG*LREVCA
Trigger: AGCACAGACCTCTCTCAGCCAGCCTGCCCAGACCAC...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTCACCAGCCCTGGTGTaGCATGGCCCAACCATGTCC +
Preference number: 4 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLSPALV*HGPTMS
Trigger: GGACATGGTTGGGCCATGCCACACCAGGGCTGGTGA...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGGGCTGTGGAAGCTTTaGACCAGCAACAACAAGCTA +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGGLWKL*TSNNKL
Trigger: TAGCTTGTTGTTGCTGGTCCAAAGCTTCCACAGCCC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTCGAGACCAAACAGTATaGGCAGGAACCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPRDQTV*AGTRDE
Trigger: CTCATCCCTGGTTCCTGCCCATACTGTTTGGTCTCG...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGTTCCAGCTTCTCGATaGGGGCCAAAGAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGVPASR*GPKKQF
Trigger: AAACTGTTTCTTTGGCCCTCATCGAGAAGCTGGAAC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGTGACAATCACTGGGTaGTCAGCAGTTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSVTITG*SAVESL
Trigger: CAAGCTCTCAACTGCTGATCACCCAGTGATTGTCAC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCAGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAG +
Preference number: 4 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPEERPG*DAGHCQ
Trigger: CTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTC...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGCCATCAATGGCTGAGTaGCCAGAAGTCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQPSMAE*PEVPLL
Trigger: CAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGG...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGACCATCAATGGCTGAGTaGCCAGAAGTCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRPSMAE*PEVPLL
Trigger: CAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGG...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTATTGGCCATCAATGGCTaGGTGACCAGAAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVLAING*VTRSPP
Trigger: AGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAA...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTGCGACTGGGCCGCATTaGCCACCTTCACAGCTGACG +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSATGPH*PPSQLT
Trigger: CGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGC...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGTATCTACGATCACTaGACCATTTCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRGIYDH*TISAPL
Trigger: GAGAGGTGCGGAAATGGTTCAGTGATCGTAGATACC...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCATGCCATTGGCTTCAGTaGCCCTCAGGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPCHWLQ*PSGSSG
Trigger: ACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCA...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCTCTGCCAGTTTGTTTaGCTCATCATCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGLCQFV*LIILRV
Trigger: GACCCTGAGGATGATGAGTCAAACAAACTGGCAGAG...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGSLRTI*VGRSSV
Trigger: CACTGAAGAACGGCCAACTCAAATGGTACGAAGACT...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTGCQGQ*PVALVG
Trigger: TCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QVDRSLVRPSLPATLRATGCQGQ*PVALVG
Trigger: TCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACC...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCTTTGTGAACTGCTGTaGGCTCACCAGTACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHLCELL*AHQYQG
Trigger: GCCCTGGTACTGGTGAGCTCACAGCAGTTCACAAAG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAACCATAGGAGGCTCTaGAATGAGTGTGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGNHRRL*NECGER
Trigger: CCTTTCTCCACACTCATTTCAGAGCCTCCTATGGTT...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTCCTTGGAGCCACATaGGCACGGTGCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCVLGAT*ARCPAR
Trigger: CCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGAC...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACACTGTAGGTCCTGCATaGACTTGTCCACCAACTGTG +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHTVGPA*TCPPTV
Trigger: CACAGTTGGTGGACAAGTTCATGCAGGACCTACAGT...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTATCTGGTTTCACCTTTaGGAACTCGATCTACAACCC +
Preference number: 4 (lower is better)
Translates to: QVPSSRAWERHVAAESRVIWFHL*ELDLQP
Trigger: GGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGAT...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCGGTGAGTCAAACTGGTaGAATCTCCCAGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSGESNW*NLPGKL
Trigger: GAGTTTACCTGGGAGATTTCACCAGTTTGACTCACC...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGCCTCCCGGGTTCAAGTaGTTCTCCTTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVPPGFK*FSFLSL
Trigger: GAGGCTGAGGAAGGAGAATCACTTGAACCCGGGAGG...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACCACAGGGGACCTCGTaGGGCCTGGAGATTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLPQGTS*GLEIQP
Trigger: GGGCTGAATCTCCAGGCCTCACGAGGTCCCCTGTGG...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGGGTAGGAAGATCATTTaGGGCCAGGAGTTCGGGATT +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWGRKII*GQEFGI
Trigger: AATCCCGAACTCCTGGCCTCAAATGATCTTCCTACC...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTCTGTGCTGCCTCACTaGTGGCAGCAGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHSVLPH*WQQMLL
Trigger: CAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGA...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSPLGQE*WCSQGC
Trigger: GCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCTGGCTGACTGGAACTaGCCCATTGATGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGLADWN*PIDEGM
Trigger: CATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAG...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGTGCAGAGCTGGCAGATaGCTGGCTGACTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQCRAGR*LADWNC
Trigger: GCAGTTCCAGTCAGCCAGGCATCTGCCAGCTCTGCA...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCTGTACGTTGGAATGCTaGTCAGGGGGATCATCACTT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGCTLEC*SGGSSL
Trigger: AAGTGATGATCCCCCTGAGCAGCATTCCAACGTACA...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWVRVHG*IVRWNA
Trigger: AGCATTCCAACGTACAATGCAGCCATGGACTCTAAC...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGACCAGCTGATCCCCTaGTTCAGCCTTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRDQLIP*FSLWAV
Trigger: CACAGCCCAAAGGCTGAAGCAGGGGATCAGCTGGTC...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGGGGAACTTGTTGCTTaGAACCCATTGGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGGELVA*NPLAIN
Trigger: ATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGATGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRCSTSL*PGNWFR
Trigger: TCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACA...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACAGGAAGAGGGTTTTGTaGAAAACTGCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHRKRVL*KTALQG
Trigger: GCCCTGGAGAGCAGTTTTGCACAAAACCCTCTTCCT...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGAAGAGGGTTTTGTaGAAAACTGCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGRKRVL*KTALQG
Trigger: GCCCTGGAGAGCAGTTTTGCACAAAACCCTCTTCCT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCACTGCCAAGATATGGCTaGTGGGCATTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPLPRYG*WAFPES
Trigger: GCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAG...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGCCAAGATATGGCTaGTGGGCATTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRLPRYG*WAFPES
Trigger: GCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRTLPGS*SASLFD
Trigger: GTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGT...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGAGTCATAGTCCTGGTTaGTTGGCCACTGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWSHSPG*LATVSG
Trigger: TCCAGACACAGTGGCCAAGCAACCAGGACTATGACT...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGTCATAGTCCTGGTTaGTTGGCCACTGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGSHSPG*LATVSG
Trigger: TCCAGACACAGTGGCCAAGCAACCAGGACTATGACT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTCTTCAGTGCGTACCTaGTATCTCCAAACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRSSVRT*YLQTSA
Trigger: TGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCTTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGLAVLQ*VPAISK
Trigger: TTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAA...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGGGCCCTGGTCCTCACTaGCTGTGTCTGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQGPGPH*LCLPRL
Trigger: GAGCCGTGGCAGACACAGGCAGTGAGGACCAGGGCC...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTCATCCCTTTGTGAACTaGTGTGAGCTCACCAGTACC +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRHPFVN*CELTST
Trigger: GGTACTGGTGAGCTCACAGCAGTTCACAAAGGGATG...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTATGAGCACGGTGCCCTaGCAGGTCCAGTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSMSTVP*QVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCAT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTGCACACGCCAGATaGGCGTTTTACGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSTAHAR*AFYENQ
Trigger: TTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGT...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGGGTCACTGTAGGTCCTaGATGAACTTGTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWGHCRS*MNLSTN
Trigger: GTTGGTGGACAAGTTCATGCAGGACCTACAGTGACC...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGGCTACATACCTGGCTaGTGCCATCCCACATCCCCC +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGGYIPG*CHPTSP
Trigger: GGGGGATGTGGGATGGCAGCAGCCAGGTATGTAGCC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCTAATGGCAGGTAAATaGTCAGGCTCCTCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSLMAGK*SGSSQY
Trigger: GTACTGAGAGGAGCCTGAGCATTTACCTGCCATTAG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCGGGCAACCCCACTCCTaGCTCAGCACGACCACAGTC +
Preference number: 4 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCGQPHS*LSTTTV
Trigger: GACTGTGGTCGTGCTGAGGCAGGAGTGGGGTTGCCC...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGTCACATGTTGCTTCTaGAGTTGCATTTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLVTCCF*SCISVL
Trigger: CAGGACTGAAATGCAACTGCAGAAGCAACATGTGAC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559234.5
CDS-3UTR CCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCACCACAGTCTTCACTaGGATCATGCATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWHHSLH*DHAWCG
Trigger: ACCACACCATGCATGATCCCAGTGAAGACTGTGGTG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTACCCCGGAGTGACATGTaGCATTGTGCAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVPRSDM*HCARKA
Trigger: GGCTTTCCTTGCACAATGCCACATGTCACTCCGGGG...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTCATGATTGTCTGGCTTaGCCACGTTCCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRHDCLA*PRSTQS
Trigger: GCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATG...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAAACCACATGATTGTCTaGCTTGGCCACGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPNHMIV*LGHVPH
Trigger: GTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTT...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCAGCCTCACCCACAGGCTaGCTAGGGACATTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPASPTG*LGTFSL
Trigger: CAAGGAGAATGTCCCTAGCCAGCCTGTGGGTGAGGC...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGTGCTATGCCAGCTaGCAAAACTGGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRLCYAS*QNWHCS
Trigger: GGAACAGTGCCAGTTTTGCCAGCTGGCATAGCACAG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAAGTGGCTGGTGGACATaGTGTTGGGCATGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRSGWWT*CWACTG
Trigger: CCCAGTGCATGCCCAACACCATGTCCACCAGCCACT...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATAGAGCTCGGCTTTGGTaGGGTAGGGGAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHRARLW*GRGTCG
Trigger: TCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCT...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHSRARL*WGRGTC
Trigger: ACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCT...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWLELFF*ILGHHS
Trigger: ACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAG...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCCCCTCCTGTACCCTCTaGCTGCCCCACAACGTGACC +
Preference number: 4 (lower is better)
Translates to: QVDRSLVRPSLPATLRATPSCTL*LPHNVT
Trigger: GGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGG...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCCCTCCTGTACCCTCTaGCTGCCCCACAACGTGACC +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIPSCTL*LPHNVT
Trigger: GGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCAAGTTCCGGCAGTaGTATCTACGATCACTGAAC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLFKFRQ*YLRSLN
Trigger: GTTCAGTGATCGTAGATACCACTGCCGGAACTTGAA...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTACAGGTATCATCGCTCTaGAGCCCTTCAAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVQVSSL*SPSSSG
Trigger: GCCGGAACTTGAAGGGCTCCAGAGCGATGATACCTG...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGG +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHIRDLGR*GEGHLW
Trigger: CCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCT...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSVKSGV*CQDCRL
Trigger: CAAACGACAATCTTGGCACCAGACTCCTGACTTCAC...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCCTCGTCGGGTCATTTTaGTTTCACTTCTCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSLVGSF*FHFSGG
Trigger: ACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAG...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTAGACCCTTAGCTCACTaGCCAAATCCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGRPLAH*PNPLLH
Trigger: GTGGAGAAGAGGATTTGGCCAGTGAGCTAAGGGTCT...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTAGACCCTTAGCTCACTaGCCAAATCCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSRPLAH*PNPLLH
Trigger: GTGGAGAAGAGGATTTGGCCAGTGAGCTAAGGGTCT...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATACAGGCACCCAGCCCTaGAATCTCGTTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHTGTQP*NLVPAI
Trigger: AATGGCAGGAACGAGATTCCAGGGCTGGGTGCCTGT...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCAGCTCACTTTGCCTaGGAGCTGCTCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVAAHFA*ELLCQF
Trigger: AAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGC...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAACACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PCATKFLNCTRQMRVLREHHLWP*QTRLGH
Trigger: ATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTG...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGATGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGAGACAAATAAGATGTaGTCCCTATTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWETNKM*SLLGQG
Trigger: TCCCTGTCCCAATAGGGACCACATCTTATTTGTCTC...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGAGCTGCCTAGTGCACTaGTGTCCCTCCAACACAGGC +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQSCLVH*CPSNTG
Trigger: GCCTGTGTTGGAGGGACACCAGTGCACTAGGCAGCT...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGAGCTGCCTAGTGCACTaGTGTCCCTCCAACACAGGC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGSCLVH*CPSNTG
Trigger: GCCTGTGTTGGAGGGACACCAGTGCACTAGGCAGCT...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCTCAGACACCCGGAGATaGCTTCAGCCTGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCSDTRR*LQPGPP
Trigger: GGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGA...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTGTAGCCCTGGCTGTTaGGCAGGGCTAACATCTATA +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGCSPGC*AGLTSI
Trigger: TATAGATGTTAGCCCTGCCCAACAGCCAGGGCTACA...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGGCTGGGCTCCTTACATaGGCATTCTTGCCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGAGLLT*AFLPFV
Trigger: TACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGC...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCATCTGTCCAGACTGCTaGGCTCCTTACATGGGCATT +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGICPDC*APYMGI
Trigger: AATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGAT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTCTAGAGAGCACAGTGTaGAGTCCTTGTGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ESGLALPRGRRFPRLASPLESTV*SPCVKV
Trigger: CACCTTGACACAAGGACTCCACACTGTGCTCTCTAG...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCCTCCTCTCAGTACCCTaGGGCTCACCGCCTATCCAA +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAALLSVP*GSPPIQ
Trigger: TTGGATAGGCGGTGAGCCCCAGGGTACTGAGAGGAG...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGCCATGCCGATCAGGCTaGTCTCGAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQPCRSG*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGACCAGCCTGATCGGCATGG...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGTTCCAGCTTCTCGATaGGGGCCAAAGAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRVPASR*GPKKQF
Trigger: AAACTGTTTCTTTGGCCCTCATCGAGAAGCTGGAAC...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTCCAGCTTCTCGATaGGGGCCAAAGAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHVPASR*GPKKQF
Trigger: AAACTGTTTCTTTGGCCCTCATCGAGAAGCTGGAAC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCCCTCAGGGGACCAGCTaGTCCCCTGCTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFPQGTS*SPASAF
Trigger: AAAGGCTGAAGCAGGGGATCAGCTGGTCCCCTGAGG...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTT +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVAPFQS*QLFMRF
Trigger: AAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGC...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATTGCTCTCCAGGGCTCTaGGCTGCTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDCSPGL*AAQGLS
Trigger: AGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCA...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCGCCTCCTCTTCCTCCTaGGAGGCATTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIASSSS*EAFSSA
Trigger: GGCTGAGGAGAATGCCTCTCAGGAGGAAGAGGAGGC...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGCCTCCTCTTCCTCCTaGGAGGCATTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTASSSS*EAFSSA
Trigger: GGCTGAGGAGAATGCCTCTCAGGAGGAAGAGGAGGC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGSLRTI*VGRSSV
Trigger: CACTGAAGAACGGCCAACTCAAATGGTACGAAGACT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVGCQGQ*PVALVG
Trigger: TCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACC...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTCAGCAAACCACTGCTTaGCCTGCTGGGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHIQQTTA*PAGSSS
Trigger: AGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTG...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGTTCTCAGACACCTCTaGATAGGTGTCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVVLRHL*IGVTHP
Trigger: GGGATGGGTGACACCTATTCAGAGGTGTCTGAGAAC...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCCAGTCTGTTTCGAGCTaGCGTCCAGCCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: QVDRSLVRPSLPATLRATQSVSS*RPAWGL
Trigger: GAGTCCCCAGGCTGGACGTCAGCTCGAAACAGACTG...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR TCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAACCATAGGAGGCTCTaGAATGAGTGTGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGNHRRL*NECGER
Trigger: CCTTTCTCCACACTCATTTCAGAGCCTCCTATGGTT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRVVSKK*AELQVD
Trigger: GTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCAC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGATCTGGTTTCACCTTTaGGAACTCGATCTACAACCC +
Preference number: 4 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGIWFHL*ELDLQP
Trigger: GGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGAT...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCTGCCCCTAGGCCACTaGCTGAGCAGGATAAAACCC +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSLPLGH*LSRIKP
Trigger: GGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGAACTTTCAGAAATTaGGGAAGGGGGTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVRTFRN*GRGCFP
Trigger: GGGAAAGCACCCCCTTCCTCAATTTCTGAAAGTTCT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTCTGGTCTCGAACTCCTaGCCTCAGGTGATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSLVSNS*PQVIRL
Trigger: GAGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAG...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCGGGCTGGGCCTCCATaGTGGCATCTTGCAACACCA +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIRAGPP*WHLATP
Trigger: TGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGGCTGGGGTTCTGTGCTaGCTCACTGCTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVAGVLC*LTAGSR
Trigger: TCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGC...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGCTGGGGTTCTGTGCTaGCTCACTGCTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFAGVLC*LTAGSR
Trigger: TCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCAATAGCCATCTAAAGTaGTCCGATGCCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: WERHVAAESRVWLFHVAGNSHLK*SDAHWP
Trigger: TGGCCAATGGGCATCGGAGCACTTTAGATGGCTATT...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTGGTGCTCTCAGGGATaGTCTGCTCCACAACCACAT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHWCSQG*SAPQPH
Trigger: ATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCA...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAATGGTGCTCTCAGGGATaGTCTGCTCCACAACCACAT +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEWCSQG*SAPQPH
Trigger: ATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCA...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSGQECW*SQGCSA
Trigger: AGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACC...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGGTAATGATGATTTCTaGCTGTCCATCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSGNDDF*LSISPF
Trigger: GAAGGGGCTGATGGACAGGCAGAAATCATCATTACC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTGTACGTTGGAATGCTaGTCAGGGGGATCATCACTT +
Preference number: 4 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGCTLEC*SGGSSL
Trigger: AAGTGATGATCCCCCTGAGCAGCATTCCAACGTACA...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGGGGAACTTGTTGCTTaGAACCCATTGGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHGELVA*NPLAIN
Trigger: ATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGGGGAACTTGTTGCTTaGAACCCATTGGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPGELVA*NPLAIN
Trigger: ATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGAGGGGAACTTGTTaGTTGCAACCCATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPERGTC*LQPIGH
Trigger: ATGGCCAATGGGTTGCAAGCAACAAGTTCCCCTCTC...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCGGTGCCACACCTGGCTaGTTGGGGACGGATGTCACC +
Preference number: 4 (lower is better)
Translates to: GALSCTITTKPQGPGKPSGATPG*LGTDVT
Trigger: GGTGACATCCGTCCCCAAGCAGCCAGGTGTGGCACC...GGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAATGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWECSTSL*PGNWFR
Trigger: TCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACA...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAAGTCAGGAGTCTGGTaGCAAGATTGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGKSGVW*QDCRLA
Trigger: TGCCAAACGACAATCTTGGCACCAGACTCCTGACTT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGGTCTGGACAAAGAGCTaGCGCAGCAAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVVWTKS*RSKCRC
Trigger: GCAGCGGCACTTGCTGCGGCAGCTCTTTGTCCAGAC...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGCCCTGGTGGGAAGTTaGCTCGCTTATAGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHALVGS*LAYSLR
Trigger: ACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCAACCACTGCTTGACCTaGTGGGAGCTCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAANHCLT*WELIWV
Trigger: GACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTT...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHIEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGREPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCAGCACCCTTGGGCATaGATCCAGCACACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVQHPWA*IQHTGQ
Trigger: CTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTG...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGCAGCACCCTTGGGCATaGATCCAGCACACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLQHPWA*IQHTGQ
Trigger: CTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTG...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGATGAGCACGGTGCCCTaGCAGGTCCAGTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLMSTVP*QVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCAT...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCCCCCAACACCCATGTaGCACCAAGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHPPTPM*HQVSQL
Trigger: CAGTTGAGAAACTTGGTGGCACATGGGTGTTGGGGG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGGGCCGCCCCAGCTaGCTAGTGCACTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLLGRPS*LVHWCP
Trigger: GGGACACCAGTGCACTAGGCAGCTGGGGCGGCCCAG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGGCTACATACCTGGCTaGTGCCATCCCACATCCCCC +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTGYIPG*CHPTSP
Trigger: GGGGGATGTGGGATGGCAGCAGCCAGGTATGTAGCC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCTCTGCAGCCCACAAATaGCTTCTACTGAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGSAAHK*LLLKAT
Trigger: TGTTGCCTTCAGTAGAAGGCATTTGTGGGCTGCAGA...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCCTGTTGGTTCCATTTaGACTCAGAGCAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGPVGSI*TQSKPS
Trigger: GCTTGGTTTGCTCTGAGTGCAAATGGAACCAACAGG...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCTGGGTTCCCTCCCCTaGTCTAGACTTCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGLGSLP*SRLQGS
Trigger: ACTGCCCTGAAGTCTAGAGCAGGGGAGGGAACCCAG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCCTAATGGCAGGTAAATaGTCAGGCTCCTCTCAGTAC +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSLMAGK*SGSSQY
Trigger: GTACTGAGAGGAGCCTGAGCATTTACCTGCCATTAG...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCATTAACACATACAGGTaGTCATGTGTGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PSSRAWERHVAAESRVWLINTYR*SCVCVH
Trigger: GTGCACACACACACATGAGCACCTGTATGTGTTAAT...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCACTCCCCAGTCTTATTaGCCAGAAGTCCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCTPQSY*PEVRPQ
Trigger: CTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGT...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTCTCCTGACAGCAGACTaGTCAACAGTCACTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHILLTAD*STVTPQ
Trigger: CTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAG...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCGGGCAACCCCACTCCTaGCTCAGCACGACCACAGTC +
Preference number: 4 (lower is better)
Translates to: TSYNVPLSTCVMTASLIIGQPHS*LSTTTV
Trigger: GACTGTGGTCGTGCTGAGGCAGGAGTGGGGTTGCCC...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACACTGGGATCATGCATaGTGTGGTGGATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPHWDHA*CGGFPL
Trigger: AAGAGGAAATCCACCACACCATGCATGATCCCAGTG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACACCACAGTCTTCACTaGGATCATGCATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRHHSLH*DHAWCG
Trigger: ACCACACCATGCATGATCCCAGTGAAGACTGTGGTG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAG +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGAGPPC*HLATPQ
Trigger: CTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTKVSAG*ASMLAS
Trigger: AGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGGGGGCAGATCCTGCTaGGGTCCTTCAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCGGRSC*GPSGKV
Trigger: GACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCC...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCAGCCATCAGTACTGCTaGGGTTCTGTGCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLSHQYC*GSVLPH
Trigger: GTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCT...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAAGCCATCAGTACTGCTaGGGTTCTGTGCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRSHQYC*GSVLPH
Trigger: GTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCT...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCAGCCCCTTCAGCACTaGGCTCACCCGCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVQPLQH*AHPLGQ
Trigger: CTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTG...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AACCAAGTGCAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCAAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: NQVQTLGEFRDHLVSPAPSRARL*WGRGTC
Trigger: ACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCT...TGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVSRARL*WGRGTC
Trigger: ACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCT...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGTTCTTCTGGATACTTaGTCACCACAGTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: VPSSRAWERHVAAESRVWVLLDT*SPQSNS
Trigger: GCTATTTGACTGTGGTGACCAAGTATCCAGAAGAAC...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGLELFF*ILGHHS
Trigger: ACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSLELFF*ILGHHS
Trigger: ACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRGGLLV*LLSECR
Trigger: CCTGCATTCCGACAACAGCCACACTAGCAACCCACC...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHRLAEG*VASVAV
Trigger: AACAGCCACACTAGCAACCCACCCTTCTGCCAAACG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCACTCGTCGGGTCATTTTaGTTTCACTTCTCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPLVGSF*FHFSGG
Trigger: ACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAG...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAACGCTCTGCCAAGATATaGCTGCTGGGCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWERSAKI*LLGISR
Trigger: TCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCG...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCGCAGCTCACTTTGCCTaGGAGCTGCTCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCAAHFA*ELLCQF
Trigger: AAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGC...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCTTGGCCACTGTGTCTaGACAAAGAGCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGLGHCV*TKSCRS
Trigger: GCTGCGGCAGCTCTTTGTCCAGACACAGTGGCCAAG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACCAGCGCACCACCTCTaGCCGTGGCAGACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAPAHHL*PWQTRL
Trigger: CAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGACCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGAGCCACGGGCACTCTaGGTGTTCTGCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTEPRAL*VFCQGS
Trigger: AGATCCCTGGCAGAACACCCAGAGTGCCCGTGGCTC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCACACCGGCCAGACCCTaGGGTGGGAGCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSTPARP*GGSHGH
Trigger: GTGCCCGTGGCTCCCACCCCAGGGTCTGGCCGGTGT...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGCTGGTACTTGTGGCTTaGCACTCTGGGAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVLVLVA*HSGKQV
Trigger: CACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAG...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGTGTGCCCACGAAGCCTaGTACTTGTGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQCAHEA*YLWLGT
Trigger: AGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACA...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCTGTAGCCCTGGCTGTTaGGCAGGGCTAACATCTATA +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSCSPGC*AGLTSI
Trigger: TATAGATGTTAGCCCTGCCCAACAGCCAGGGCTACA...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCTGTGCACGACTGGCTaGATTCAGGGTTTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSLCTTG*IQGFAP
Trigger: GGGGGCAAAACCCTGAATCCAGCCAGTCGTGCACAG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCAAACCCCAAGGCCCTaGCAAGCCATCCAACTAGGG +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGQTPRP*QAIQLG
Trigger: CCCTAGTTGGATGGCTTGCCAGGGCCTTGGGGTTTG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGAGAGAGATTTCCTGGTaGGACGGCCTCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVREISW*DGLPRL
Trigger: TAGCCTTGGGAGGCCGTCCCACCAGGAAATCTCTCT...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTAGGAACTGAGCCCTGCTaGCTACCTGACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLGTEPC*LPDLGG
Trigger: CCCACCCAGGTCAGGTAGCCAGCAGGGCTCAGTTCC...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGCCAGAGAAAACTACATaGTGGGTAGATGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GAQQPGMGTACGSRESGLPEKTT*WVDEVE
Trigger: TTCAACCTCATCTACCCACCATGTAGTTTTCTCTGG...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGCCATGGCAGGAGATaGGACCCTCTTGCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRGHGRR*DPLAEF
Trigger: AAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCC...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAGCTGTTTTCTCGGTTTaGTCTCTCACACCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRAVFSV*SLTPGH
Trigger: ATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGC...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AACCAAGTGCAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCACTGTTTCTGAGCTTCTaGCTGCCCTCTGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: NQVQTLGEFRDHLVSPAPLFLSF*LPSDGV
Trigger: GACCCCATCAGAGGGCAGCCAGAAGCTCAGAAACAG...TGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421422.1
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAATCAAGATCCATCCCTaGAGCTGGGGGTGGGACCAA +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRIKIHP*SWGWDQ
Trigger: TTGGTCCCACCCCCAGCTCCAGGGATGGATCTTGAT...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS-3UTR CCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGGTTGCATTTCAGTCCTaGCAGCGGCGGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWVAFQS*QRRRWR
Trigger: CCGCCACCGCCGCCGCTGCCAGGACTGAAATGCAAC...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559234.5
CDS-3UTR TCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGATCTTGCTGGCCATGGTaGCAATCACTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRSCWPW*QSLGDQ
Trigger: CTGATCACCCAGTGATTGTCACCATGGCCAGCAAGA...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCCTGGCTTCCCCGGAGTaGCATGTGGCATTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCLASPE*HVALCK
Trigger: CTTGCACAATGCCACATGTCACTCCGGGGAAGCCAG...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR TCA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAG +
Preference number: 4 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCEERPG*DAGHCQ
Trigger: CTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTC...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTTTGGCCATCAATGGCTaGGTGACCAGAAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSLAING*VTRSPP
Trigger: AGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAA...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGCGACTGGGCCGCATTaGCCACCTTCACAGCTGACG +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAATGPH*PPSQLT
Trigger: CGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGC...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAATGCTGGGGCAGGCCGTaGGGAGCGACTGGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQCWGRP*GATGPH
Trigger: ATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCA...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTT +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPAPFQS*QLFMRF
Trigger: AAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGC...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTATGATGATGGAACTGTaGTCTCCAGGTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGMMMEL*SPGIIA
Trigger: AGCGATGATACCTGGAGATCACAGTTCCATCATCAT...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTATGTATTTGGTTGGTGTaGAGTCAGGAGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVCIWLV*SQESGA
Trigger: GGCACCAGACTCCTGACTTCACACCAACCAAATACA...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CCAAAAAGGAGGCTCTCAACCCCTCTCCAAGGCCAGACGCTCTCTGTACTCCCATGCCATTGGCTTCAGTaGCCCTCAGGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PKRRLSTPLQGQTLSVLPCHWLQ*PSGSSG
Trigger: ACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCA...TGGGAGTACAGAGAGCGTCTGGCCTTGGAGAGGGGTTGAGAGCCTCCTTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVDPSGP*WSHSPG
Trigger: ACCAGGACTATGACTCCATCATGGCCCAGACGGGTC...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIDPSGP*WSHSPG
Trigger: ACCAGGACTATGACTCCATCATGGCCCAGACGGGTC...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAATGTGTCAAAGGGCTCTaGGCTGGCCTCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKCVKGL*AGLRDT
Trigger: CGTGTCCCTGAGGCCAGCTCAGAGCCCTTTGACACA...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGACCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRPDCGR*GAPVTQ
Trigger: CTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGG...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCCCACTAGTACATGTGTaGGCCCGCAAGGCACTACCC +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFPLVHV*ARKALP
Trigger: GGGTAGTGCCTTGCGGGCTCACACATGTACTAGTGG...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGCTGCCCCTAGGCCACTaGCTGAGCAGGATAAAACCC +
Preference number: 4 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRLPLGH*LSRIKP
Trigger: GGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAG...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAAGAACTTTCAGAAATTaGGGAAGGGGGTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPRTFRN*GRGCFP
Trigger: GGGAAAGCACCCCCTTCCTCAATTTCTGAAAGTTCT...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCAGGCTGGGAACTCAGTaGCCAGGAACCGAGCTGACG +
Preference number: 4 (lower is better)
Translates to: GALSCTITTKPQGPGKPSRLGTQ*PGTELT
Trigger: CGTCAGCTCGGTTCCTGGTCACTGAGTTCCCAGCCT...GGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421422.1
CDS-3UTR TCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTCTATTTGCTGCCTTTaGCGGCTATCACAATTCAGC +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSSICCL*RLSQFS
Trigger: GCTGAATTGTGATAGCCGTCAAAGGCAGCAAATAGA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432768.6
CDS-3UTR GCA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTGTTGCTTCTGCAGTTaGATTTCAGTCCTAAGCATA +
Preference number: 4 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCCCFCS*ISVLSI
Trigger: TATGCTTAGGACTGAAATGCAACTGCAGAAGCAACA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000560364.5
CDS-3UTR GCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCATCCCTCTTCACTTTATaGAGTCCCACAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPSLFTL*SPTSIS
Trigger: AGAGATGCTTGTGGGACTGCATAAAGTGAAGAGGGA...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAACGGGCTGGGCCTCCATaGTGGCATCTTGCAACACCA +
Preference number: 4 (lower is better)
Translates to: PCATKFLNCTRQMRVLRERAGPP*WHLATP
Trigger: TGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCG...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGACTGCTGGCAGCAGATaGTTCTGGGGGCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVTAGSR*FWGQIL
Trigger: CAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGT...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCACTGCTGGCAGCAGATaGTTCTGGGGGCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFTAGSR*FWGQIL
Trigger: CAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGT...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKTAGVL*CLTAGS
Trigger: GCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGT...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCCCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCPLGQE*WCSQGC
Trigger: GCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGG...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTACTGGCTGACTGGAACTaGCCCATTGATGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVLADWN*PIDEGM
Trigger: CATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAG...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTATGCACTGGGGGCTGCTaGTGGAGGGAGAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLCTGGC*WRERNC
Trigger: ACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCA...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR GCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWVRVHG*IVRWNA
Trigger: AGCATTCCAACGTACAATGCAGCCATGGACTCTAAC...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRVRVHG*IVRWNA
Trigger: AGCATTCCAACGTACAATGCAGCCATGGACTCTAAC...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTGACCAGCTGATCCCCTaGTTCAGCCTTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSDQLIP*FSLWAV
Trigger: CACAGCCCAAAGGCTGAAGCAGGGGATCAGCTGGTC...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCAGCTGCCGCAGCAAGTaGCGCTGCTGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: TSYNVPLSTCVMTASLIISCRSK*RCWAVF
Trigger: AAAGACTGCCCAGCAGCGGCACTTGCTGCGGCAGCT...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATAGCTGCCGCAGCAAGTaGCGCTGCTGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDSCRSK*RCWAVF
Trigger: AAAGACTGCCCAGCAGCGGCACTTGCTGCGGCAGCT...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAATCTTCAGTGCGTACCTaGTATCTCCAAACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWESSVRT*YLQTSA
Trigger: TGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGA...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGCCCTGGTGGGAAGTTaGCTCGCTTATAGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRALVGS*LAYSLR
Trigger: ACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGC...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGCCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGACAGCACCCTTGGGCATaGATCCAGCACACCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRQHPWA*IQHTGQ
Trigger: CTGGCCGGTGTGCTGGATGCATGCCCAAGGGTGCTG...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCCCAGGAGGTGTCTGTaGCCACGAAGCCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTPRRCL*PRSLVL
Trigger: AAGTACCAGGCTTCGTGGGCACAGACACCTCCTGGG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTACCACCAGTGCTTCTTaGCCAAAGCCCTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSTTSAS*PKPLPS
Trigger: AGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGT...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCATAGGCTGCAAAACTTaGCAAGTACTCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGIGCKT*QVLTSP
Trigger: GGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCCCCCCAACACCCATGTaGCACCAAGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCPPTPM*HQVSQL
Trigger: CAGTTGAGAAACTTGGTGGCACATGGGTGTTGGGGG...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGGCTACATACCTGGCTaGTGCCATCCCACATCCCCC +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDGYIPG*CHPTSP
Trigger: GGGGGATGTGGGATGGCAGCAGCCAGGTATGTAGCC...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAAGGGGAACTGAGCCCTaGTGGCTACCTGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKRGTEP*WLPDLG
Trigger: ACCCAGGTCAGGTAGCCAGCAGGGCTCAGTTCCCCT...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCTGAGAGAGGTCTGTaGTCTCAGGTAAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEAERGL*SQVKGE
Trigger: CTCTCCTTTTACCTGAGAGCACAGACCTCTCTCAGC...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTACTCCCTTCGCTCAGCTaGCAGAGCAGCCACGAAAGC +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLLPSLS*QSSHES
Trigger: GCTTTCGTGGCTGCTCTGGCAGCTGAGCGAAGGGAG...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCACCACAATGAGTTaGGTAGCAGGAGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGFTTMS*VAGEKD
Trigger: ATCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAA...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000560361.5
CDS-3UTR CCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCTTCACCACAATGAGTTaGGTAGCAGGAGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGFTTMS*VAGEKD
Trigger: ATCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAA...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGGATCATGCATGGTGTaGTGGATTTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHGSCMV*WISSCW
Trigger: CCAGCAAGAGGAAATCCACCACACCATGCATGATCC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCGGGGGCAGATCCTGCTaGGGTCCTTCAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGGGRSC*GPSGKV
Trigger: GACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCC...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCATATGTCCCACAAATTaGGTCATGTCATGGGATCTG +
Preference number: 4 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGICPTN*VMSWDL
Trigger: CAGATCCCATGACATGACCCAATTTGTGGGACATAT...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATG +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSRSTQS*LPRSDM
Trigger: CATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCTAGGTCAGGAGTGCTaGTGCTCTCAGGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSLGQEC*CSQGCS
Trigger: AGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATACTGGGGGCTGCTGCTaGAGGGAGAGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDTGGCC*RERNCA
Trigger: AGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGT...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGCTTGGCCGTGGGCAGTaGCTGGTGGACATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLLGRGQ*LVDMVL
Trigger: CAACACCATGTCCACCAGCCACTGCCCACGGCCAAG...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCGAAGGGCCTTGGCCGTaGGCAGTGGCTGGTGGACAT +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGEGPWP*AVAGGH
Trigger: ATGTCCACCAGCCACTGCCCACGGCCAAGGCCCTTC...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQGCIVR*NAAQGD
Trigger: ATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCC...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVGCIVR*NAAQGD
Trigger: ATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCC...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWLELFF*ILGHHS
Trigger: ACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCAAGTTCCGGCAGTaGTATCTACGATCACTGAAC +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGFKFRQ*YLRSLN
Trigger: GTTCAGTGATCGTAGATACCACTGCCGGAACTTGAA...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCAGGTATCATCGCTCTaGAGCCCTTCAAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGQVSSL*SPSSSG
Trigger: GCCGGAACTTGAAGGGCTCCAGAGCGATGATACCTG...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGATTACCTCAGGGACCTTaGACGATGGGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRLPQGP*TMGRRT
Trigger: TGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAA...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGACGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRRLAEG*VASVAV
Trigger: AACAGCCACACTAGCAACCCACCCTTCTGCCAAACG...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGLLVFG*CEVRSL
Trigger: CAGACTCCTGACTTCACACCAACCAAATACAAGGAG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPLLVFG*CEVRSL
Trigger: CAGACTCCTGACTTCACACCAACCAAATACAAGGAG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCCGCTCTGCCAAGATATaGCTGCTGGGCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAARSAKI*LLGISR
Trigger: TCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCG...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAATAGTCCTGGTTGCTTaGCCACTGTGTCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRIVLVA*PLCLDK
Trigger: TTTGTCCAGACACAGTGGCCAAGCAACCAGGACTAT...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGCWELI*VLSQRF
Trigger: GAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCA...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCCCAGTACCAGGGCCCTaGTCCTCACTGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCPVPGP*SSLPVS
Trigger: AGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGG...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATACCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCGTCTCTGTGCACGACTaGCTGGATTCAGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAAVSVHD*LDSGFC
Trigger: GCAAAACCCTGAATCCAGCCAGTCGTGCACAGAGAC...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGATCCCCCACTGCCACTaGGCTAGTGTGGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVIPHCH*ASVGVS
Trigger: AGACACACCCACACTAGCCCAGTGGCAGTGGGGGAT...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCACCTGGGTGGGCTGCTaGCTTTGCCCTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFTWVGC*LCPGRL
Trigger: AAGTCTTCCAGGGCAAAGCCAGCAGCCCACCCAGGT...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCGCAGCAGAAACCTGTTaGTTCCATTTGCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSAAETC*FHLHSE
Trigger: CTCTGAGTGCAAATGGAACCAACAGGTTTCTGCTGC...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGAGTTCAGAGACCACTTaGTTAGCCCTGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTSSETT*LALPHP
Trigger: GGGGTGGGGCAGGGCTAACCAAGTGGTCTCTGAACT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCCACCGCCTATCCAAGTaGACAGCAGGGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCHRLSK*TAGKVP
Trigger: AGGCACCTTCCCTGCTGTCCACTTGGATAGGCGGTG...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCTCCTCTCAGTACCCTaGGGCTCACCGCCTATCCAA +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQILLSVP*GSPPIQ
Trigger: TTGGATAGGCGGTGAGCCCCAGGGTACTGAGAGGAG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTGCTGACAATCTCATGTaGGGCTCTGGCCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSADNLM*GSGPVP
Trigger: TGGAACAGGGCCAGAGCCCCACATGAGATTGTCAGC...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGGGGAGAAAGGAAGGTaGGCGTGTTTTCTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGGEKGR*ACFLFN
Trigger: ATTAAAGAGAAAACACGCCCACCTTCCTTTCTCCCC...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGGGGAGAAAGGAAGGTaGGCGTGTTTTCTCTTTAAT +
Preference number: 4 (lower is better)
Translates to: SRAWERHVAAESRVWLFHGEKGR*ACFLFN
Trigger: ATTAAAGAGAAAACACGCCCACCTTCCTTTCTCCCC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp TACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTaGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: YIVGGRTDENPI*LAACLVVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAAAGTCTGTGTGCTCTaGGTTCATATGTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: GMGTACGSRESGLALPRGKVCVL*VHMSHK
Trigger: TTTGTGGGACATATGAACTCAGAGCACACAGACTTT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTCCTCAGGGGACCAGCTaGTCCCCTGCTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAPQGTS*SPASAF
Trigger: AAAGGCTGAAGCAGGGGATCAGCTGGTCCCCTGAGG...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCACCGTAATTGTGGGCTaGGGCACAGACTGGATGACT +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGTVIVG*GTDWMT
Trigger: AGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGT...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGTTGGCCATCAATGGCTaGGTGACCAGAAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWLAING*VTRSPP
Trigger: AGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAA...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGCGACTGGGCCGCATTaGCCACCTTCACAGCTGACG +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAATGPH*PPSQLT
Trigger: CGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGC...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCGGCCCGTCACTTTTGTaGGATGTTCAACTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCGPSLL*DVQLRS
Trigger: AGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCC...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATGCTCTCCAGGGCTCTaGGCTGCTCAGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAACSPGL*AAQGLS
Trigger: AGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGCTCTGCCAGTTTGTTTaGCTCATCATCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQLCQFV*LIILRV
Trigger: GACCCTGAGGATGATGAGTCAAACAAACTGGCAGAG...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVDPSGP*WSHSPG
Trigger: ACCAGGACTATGACTCCATCATGGCCCAGACGGGTC...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGTGAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLPSLIAQKSGHREQGFVKVLLP*GTQRGH
Trigger: GTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTT...CACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGGTGGTTTCTAAGAAATaGGCGGAGCTACAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGVVSKK*AELQVD
Trigger: GTCCACCTGTAGCTCCGCTCATTTCTTAGAAACCAC...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAATCTGGTTTCACCTTTaGGAACTCGATCTACAACCC +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRIWFHL*ELDLQP
Trigger: GGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGAT...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCGCTCCTCACTCCTGCTaGCAATCTCATGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVAPHSC*QSHVGL
Trigger: GAGCCCCACATGAGATTGTCAGCAGGAGTGAGGAGC...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACTTTGGCAACCTCCCTaGCTTCCACAAAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLLWQPP*LPQRLP
Trigger: GGGCAGCCTTTGTGGAAGTCAGGGAGGTTGCCAAAG...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCTCTGGGGGCAGATCCTaGTGGGGTCCTTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGSGGRS*WGPSGK
Trigger: CTTGCCTGAAGGACCCCAGCAGGATCTGCCCCCAGA...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTCTGGGGGCAGATCCTaGTGGGGTCCTTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLSGGRS*WGPSGK
Trigger: CTTGCCTGAAGGACCCCAGCAGGATCTGCCCCCAGA...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATACTGCTGGCAGCAGATaGTTCTGGGGGCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDTAGSR*FWGQIL
Trigger: CAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGT...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGGCTGGGGTTCTGTGCTaGCTCACTGCTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWAGVLC*LTAGSR
Trigger: TCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGC...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGTCTAAAGTGCTCCGATaGCCATTGGCCAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVSKVLR*PLASVE
Trigger: CTCTACACTGGCCAATGGGCATCGGAGCACTTTAGA...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR GCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTAGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLGQECW*SQGCSA
Trigger: AGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACC...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAAGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PCATKFLNCTRQMRVLREGQECW*SQGCSA
Trigger: AGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACC...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAGAGGAACTGTGCTATaGCAGCTGGCAAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHIRGTVL*QLAKLA
Trigger: TGCCAGTTTTGCCAGCTGGCATAGCACAGTTCCTCT...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCACTGGGGGCTGCTaGTGGAGGGAGAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAACTGGC*WRERNC
Trigger: ACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCA...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGGCGGCCTGGATGAGATaGTGGACATTGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLAAWMR*WTLPAL
Trigger: CAGTGCTGGCAATGTCCAGCATCTCATCCAGGCCGC...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGCACAGTGTTAATGGGTaGCACACCTGGCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRHSVNG*HTWLLG
Trigger: CCCAAGCAGCCAGGTGTGGCACCCATTAACACTGTG...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCACAGTGTTAATGGGTaGCACACCTGGCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTHSVNG*HTWLLG
Trigger: CCCAAGCAGCCAGGTGTGGCACCCATTAACACTGTG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAAAGTCAGGAGTCTGGTaGCAAGATTGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEKSGVW*QDCRLA
Trigger: TGCCAAACGACAATCTTGGCACCAGACTCCTGACTT...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATAAGTCAGGAGTCTGGTaGCAAGATTGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHKSGVW*QDCRLA
Trigger: TGCCAAACGACAATCTTGGCACCAGACTCCTGACTT...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTCCAGGGCTCTGAGCTaGTCAGGGGCTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAASRALS*SGALSL
Trigger: CAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGA...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAAGGAAGAGGGTTTTGTaGAAAACTGCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRRKRVL*KTALQG
Trigger: GCCCTGGAGAGCAGTTTTGCACAAAACCCTCTTCCT...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ACAGTCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTCTGCCAAGATATGGCTaGTGGGCATTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TVTPQSYCPEVRPQGTRLLPRYG*WAFPES
Trigger: GCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAG...AAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCAGTCATAGTCCTGGTTaGTTGGCCACTGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLSHSPG*LATVSG
Trigger: TCCAGACACAGTGGCCAAGCAACCAGGACTATGACT...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAAMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGCACTCTGGGTGTTCTaGCAGGGATCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTALWVF*QGSLHA
Trigger: TGCATGCAGAGATCCCTGGCAGAACACCCAGAGTGC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTACCCAGGAGGTGTCTGTaGCCACGAAGCCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLPRRCL*PRSLVL
Trigger: AAGTACCAGGCTTCGTGGGCACAGACACCTCCTGGG...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTACCACCAGTGCTTCTTaGCCAAAGCCCTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSTTSAS*PKPLPS
Trigger: AGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTATGAGCACGGTGCCCTaGCAGGTCCAGTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAMSTVP*QVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCAT...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAAAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: PCATKFLNCTRQMRVLREKGPPP*LSLEPH
Trigger: ATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTT...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGGGTCACTGTAGGTCCTaGATGAACTTGTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGGHCRS*MNLSTN
Trigger: GTTGGTGGACAAGTTCATGCAGGACCTACAGTGACC...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTAGGATCTGTCCAGACTaGTGGGCTCCTTACATGGGC +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSRICPD*WAPYMG
Trigger: GCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTGTCCCTTTAAGCACCTaGGTGATGACTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAVPLST*VMTASL
Trigger: GAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGAC...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGTCCCTTTAAGCACCTaGGTGATGACTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFVPLST*VMTASL
Trigger: GAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGAC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTCTGGATTCAGGGTTTTaGCCCCAAACCCTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHILDSGF*PQTLEY
Trigger: GTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAG...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGTGGGTGTGTCTCTGTaGACGACTGGCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTVGVSL*TTGWIQ
Trigger: CTGAATCCAGCCAGTCGTGCACAGAGACACACCCAC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGTCTGACGAGTCCAACTaGATACAGAGAAAAGGGATA +
Preference number: 4 (lower is better)
Translates to: RAWERHVAAESRVWLFHVSDESN*IQRKGI
Trigger: TATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGA...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTACTGGGTTCCCTCCCCTaGTCTAGACTTCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLLGSLP*SRLQGS
Trigger: ACTGCCCTGAAGTCTAGAGCAGGGGAGGGAACCCAG...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATCGAGAACAACCGGATTaGTGTGCTGGGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDREQPD*CAGSLL
Trigger: CAGCAGGGACCCAGCACAGCAATCCGGTTGTTCTCG...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCTTCACCACAATGAGTTaGGTAGCAGGAGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSFTTMS*VAGEKD
Trigger: ATCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAA...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000560364.5
CDS-3UTR CCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTTCATGCATGGTGTGGTaGATTTCCTCTTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHISCMVW*ISSCWP
Trigger: TGGCCAGCAAGAGGAAATCCACCACACCATGCATGA...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGGGATCATGCATGGTGTaGTGGATTTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGGSCMV*WISSCW
Trigger: CCAGCAAGAGGAAATCCACCACACCATGCATGATCC...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTACACTGGGATCATGCATaGTGTGGTGGATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVHWDHA*CGGFPL
Trigger: AAGAGGAAATCCACCACACCATGCATGATCCCAGTG...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAG +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCAGPPC*HLATPQ
Trigger: CTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGC...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAG +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLAGPPC*HLATPQ
Trigger: CTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGC...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTATATGTCCCACAAATTaGGTCATGTCATGGGATCTG +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGICPTN*VMSWDL
Trigger: CAGATCCCATGACATGACCCAATTTGTGGGACATAT...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGCCCCGGAGTGACATGTaGCATTGTGCAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRPRSDM*HCARKA
Trigger: GGCTTTCCTTGCACAATGCCACATGTCACTCCGGGG...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGCATGATTGTCTGGCTTaGCCACGTTCCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQHDCLA*PRSTQS
Trigger: GCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATG...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGACATGATTGTCTGGCTTaGCCACGTTCCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRHDCLA*PRSTQS
Trigger: GCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATG...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGCATGATTGTCTGGCTTaGCCACGTTCCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGHDCLA*PRSTQS
Trigger: GCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATG...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCTAGGTCAGGAGTGCTaGTGCTCTCAGGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQILGQEC*CSQGCS
Trigger: AGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCTGTGCTATGCCAGCTaGCAAAACTGGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSLCYAS*QNWHCS
Trigger: GGAACAGTGCCAGTTTTGCCAGCTGGCATAGCACAG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTACTGGGGGCTGCTGCTaGAGGGAGAGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAATGGCC*RERNCA
Trigger: AGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGT...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGCTTGGCCGTGGGCAGTaGCTGGTGGACATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWLGRGQ*LVDMVL
Trigger: CAACACCATGTCCACCAGCCACTGCCCACGGCCAAG...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGTTCTTCTGGATACTTaGTCACCACAGTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPVLLDT*SPQSNS
Trigger: GCTATTTGACTGTGGTGACCAAGTATCCAGAAGAAC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCCTGGAAGAGCGGCCTaGATGAGATGCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIPGRAA*MRCWTL
Trigger: CAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCCTGGAAGAGCGGCCTaGATGAGATGCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTPGRAA*MRCWTL
Trigger: CAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCCCCCACAACGTGACCTaGAAGAGCGGCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGPHNVT*KSGLDE
Trigger: CTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGG...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCCCTCCTGTACCCTCTaGCTGCCCCACAACGTGACC +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLPSCTL*LPHNVT
Trigger: GGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAAVRSD*AALTTF
Trigger: GAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTAAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGG +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLRDLGR*GEGHLW
Trigger: CCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCT...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVGGLLV*LLSECR
Trigger: CCTGCATTCCGACAACAGCCACACTAGCAACCCACC...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ACAGTCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTCGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TVTPQSYCPEVRPQGTRLRLAEG*VASVAV
Trigger: AACAGCCACACTAGCAACCCACCCTTCTGCCAAACG...AAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCAGACCCTTAGCTCACTaGCCAAATCCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLRPLAH*PNPLLH
Trigger: GTGGAGAAGAGGATTTGGCCAGTGAGCTAAGGGTCT...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGAGCAAGTGCCGCTGCTaGGCAGTCTTTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTSKCRC*AVFLQL
Trigger: GAGCTGCAAAAAGACTGCCCAGCAGCGGCACTTGCT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAATAGTCCTGGTTGCTTaGCCACTGTGTCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEIVLVA*PLCLDK
Trigger: TTTGTCCAGACACAGTGGCCAAGCAACCAGGACTAT...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCTGTCTGCCACGGCTCTaGTCTCCTCCCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQICLPRL*SPPPFS
Trigger: AGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGACA...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTTGTCTGCCACGGCTCTaGTCTCCTCCCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMACLPRL*SPPPFS
Trigger: AGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGACA...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGCCAGTACCAGGGCCCTaGTCCTCACTGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWPVPGP*SSLPVS
Trigger: AGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGG...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCAGAGCCACGGGCACTCTaGGTGTTCTGCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPEPRAL*VFCQGS
Trigger: AGATCCCTGGCAGAACACCCAGAGTGCCCGTGGCTC...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTGAAGCCTGGTACTTGTaGCTTGGCACTCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAEAWYL*LGTLGS
Trigger: GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTC...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCTGGAGGTGAGGCACTaGGTGGTTTCTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQLEVRH*VVSQTP
Trigger: GGGTGTCTGAGAAACCACCCAGTGCCTCACCTCCAG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCGCTAGTGCCCATGGCTaGGTCACTGTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSYNVPLSTCVMTASLIIASAHG*VTVGPA
Trigger: TGCAGGACCTACAGTGACCCAGCCATGGGCACTAGC...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCTGGGCTCCTTACATaGGCATTCTTGCCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: DENPILLAACLVVGRPRVAGLLT*AFLPFV
Trigger: TACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGC...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCACAGGGCTACATACCTaGCTGCTGCCATCCCACATC +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFTGLHT*LLPSHI
Trigger: GATGTGGGATGGCAGCAGCCAGGTATGTAGCCCTGT...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCCTCCTGGTGTGACCTaGCACTGGGAACACACAGAT +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIPPGVT*HWEHTD
Trigger: ATCTGTGTGTTCCCAGTGCCAGGTCACACCAGGAGG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCGTTCCAGCTTCTCGATaGGGGCCAAAGAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAAVPASR*GPKKQF
Trigger: AAACTGTTTCTTTGGCCCTCATCGAGAAGCTGGAAC...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGTCTTGCTGGCCATGGTaGCAATCACTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRSCWPW*QSLGDQ
Trigger: CTGATCACCCAGTGATTGTCACCATGGCCAGCAAGA...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCCTGGCTTCCCCGGAGTaGCATGTGGCATTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGLASPE*HVALCK
Trigger: CTTGCACAATGCCACATGTCACTCCGGGGAAGCCAG...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTACCGTAATTGTGGGCTaGGGCACAGACTGGATGACT +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSTVIVG*GTDWMT
Trigger: AGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATGCTGGGGCAGGCCGTaGGGAGCGACTGGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPCWGRP*GATGPH
Trigger: ATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGTGCCATTGGCTTCAGTaGCCCTCAGGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVCHWLQ*PSGSSG
Trigger: ACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCA...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHISLRTI*VGRSSV
Trigger: CACTGAAGAACGGCCAACTCAAATGGTACGAAGACT...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATCAGCAAACCACTGCTTaGCCTGCTGGGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDQQTTA*PAGSSS
Trigger: AGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTG...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATATGTGTCAAAGGGCTCTaGGCTGGCCTCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTICVKGL*AGLRDT
Trigger: CGTGTCCCTGAGGCCAGCTCAGAGCCCTTTGACACA...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTCAGTCTGTTTCGAGCTaGCGTCCAGCCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAQSVSS*RPAWGL
Trigger: GAGTCCCCAGGCTGGACGTCAGCTCGAAACAGACTG...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR TCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCAGTCTGTTTCGAGCTaGCGTCCAGCCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLQSVSS*RPAWGL
Trigger: GAGTCCCCAGGCTGGACGTCAGCTCGAAACAGACTG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: QVDRSLVRPSLPATLRATKVLLP*GTQRGH
Trigger: GTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTT...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAACCATAGGAGGCTCTaGAATGAGTGTGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHINHRRL*NECGER
Trigger: CCTTTCTCCACACTCATTTCAGAGCCTCCTATGGTT...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACACCTCACAAGGACCAGTaGTGCCCAGCACCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTPHKDQ*CPAPLG
Trigger: GCCCAAGGGTGCTGGGCATCACTGGTCCTTGTGAGG...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTTTGCCCCCAAACCCTTaGGTACCTCCTACAATGTCC +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSLPPNP*VPPTMS
Trigger: GGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAA...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGTCCGTGTCTGGAGTaGGGGGAACTGAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEGPCLE*GELSPA
Trigger: AGCAGGGCTCAGTTCCCCTCACTCCAGACACGGACC...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCTTTTTCAGTTGTTTaGAGAAAGCAGGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRAFSVV*RKQVFP
Trigger: AGGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGC...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGGGGTTCTGTGCTaGCTCACTGCTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAAGVLC*LTAGSR
Trigger: TCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGCTGGGGTTCTGTGCTaGCTCACTGCTGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPAGVLC*LTAGSR
Trigger: TCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTTCTAAAGTGCTCCGATaGCCATTGGCCAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSSKVLR*PLASVE
Trigger: CTCTACACTGGCCAATGGGCATCGGAGCACTTTAGA...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCTGGTGCTCTCAGGGATaGTCTGCTCCACAACCACAT +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIWCSQG*SAPQPH
Trigger: ATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCA...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAPLGQE*WCSQGC
Trigger: GCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTCCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGC +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAPLGQE*WCSQGC
Trigger: GCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGG...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCGGTAATGATGATTTCTaGCTGTCCATCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAAGNDDF*LSISPF
Trigger: GAAGGGGCTGATGGACAGGCAGAAATCATCATTACC...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCAGAGCTGGCAGATaGCTGGCTGACTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAACRAGR*LADWNC
Trigger: GCAGTTCCAGTCAGCCAGGCATCTGCCAGCTCTGCA...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTGCACTGGGGGCTGCTaGTGGAGGGAGAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLCTGGC*WRERNC
Trigger: ACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGCACTGGGGGCTGCTaGTGGAGGGAGAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPCTGGC*WRERNC
Trigger: ACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCA...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCGACCAGCTGATCCCCTaGTTCAGCCTTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGDQLIP*FSLWAV
Trigger: CACAGCCCAAAGGCTGAAGCAGGGGATCAGCTGGTC...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGCGGCCTGGATGAGATaGTGGACATTGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAAAWMR*WTLPAL
Trigger: CAGTGCTGGCAATGTCCAGCATCTCATCCAGGCCGC...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTCTGCCAAGATATGGCTaGTGGGCATTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSLPRYG*WAFPES
Trigger: GCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAG...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTCGCAGCAAGTGCCGCTaGTGGGCAGTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLRSKCR*WAVFLQ
Trigger: CTGCAAAAAGACTGCCCAGCAGCGGCACTTGCTGCG...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGTCTGGACAAAGAGCTaGCGCAGCAAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAVWTKS*RSKCRC
Trigger: GCAGCGGCACTTGCTGCGGCAGCTCTTTGTCCAGAC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCAACCACTGCTTGACCTaGTGGGAGCTCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCNHCLT*WELIWV
Trigger: GACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTCCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTCTCTTCAAAGGTACTaGTTCCTTGAGGAACACAAA +
Preference number: 4 (lower is better)
Translates to: PGMGTACGSRESGLALPRSLQRY*FLEEHK
Trigger: TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACCTAGCACTGTCACTCTaGCCAGCCCAGGAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHLALSL*PAQEVS
Trigger: AGACACCTCCTGGGCTGGGCAGAGTGACAGTGCTAG...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGACCACCAGTGCTTCTTaGCCAAAGCCCTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLTTSAS*PKPLPS
Trigger: AGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGT...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAATGAGCACGGTGCCCTaGCAGGTCCAGTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEMSTVP*QVQFPG
Trigger: CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCAT...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCGTGGGTGTGTCTCTGTaGACGACTGGCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVVGVSL*TTGWIQ
Trigger: CTGAATCCAGCCAGTCGTGCACAGAGACACACCCAC...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAAACTTCACAACCAAGTaGAGACGCTCGGTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRNFTTK*RRSVSS
Trigger: TGAACTCACCGAGCGTCTGCACTTGGTTGTGAAGTT...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAATGGTAACCAGGGTCTaGCTAGTCTCATCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLMVTRV*LVSSPA
Trigger: GGCTGGGGATGAGACTAGGCAGACCCTGGTTACCAT...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGGACAGCAGGGAAGGTaGCTAGAGTCCCCACCAGAG +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPGQQGR*LESPPE
Trigger: CTCTGGTGGGGACTCTAGGCACCTTCCCTGCTGTCC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAGGCAGCAGATGCTTCTaGGGGCAGATCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIGSRCF*GQILLG
Trigger: CCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCC...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTAATTGGGTCATGTCATaGGATCTGAAATCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGNWVMS*DLKSQY
Trigger: ATACTGCGATTTCAGATCCCATGACATGACCCAATT...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCGCCTCACCCACAGGCTaGCTAGGGACATTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGASPTG*LGTFSL
Trigger: CAAGGAGAATGTCCCTAGCCAGCCTGTGGGTGAGGC...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGAGCTGGCAGATGCCTaGCTGACTGGAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAELADA*LTGTAP
Trigger: TGGGGCAGTTCCAGTCAGCCAGGCATCTGCCAGCTC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAAGCCAGCTGGCAAAACTaGCACTGTTCCTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: PCATKFLNCTRQMRVLREASWQN*HCSYQG
Trigger: CCCCTGATAGGAACAGTGCCAGTTTTGCCAGCTGGC...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAGCCAGCTGGCAAAACTaGCACTGTTCCTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKASWQN*HCSYQG
Trigger: CCCCTGATAGGAACAGTGCCAGTTTTGCCAGCTGGC...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCTGTGCTATGCCAGCTaGCAAAACTGGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTLCYAS*QNWHCS
Trigger: GGAACAGTGCCAGTTTTGCCAGCTGGCATAGCACAG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGACTGGGGGCTGCTGCTaGAGGGAGAGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLTGGCC*RERNCA
Trigger: AGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGT...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCGAAGGGCCTTGGCCGTaGGCAGTGGCTGGTGGACAT +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTEGPWP*AVAGGH
Trigger: ATGTCCACCAGCCACTGCCCACGGCCAAGGCCCTTC...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACGCCTGGATGAGATGCTaGACATTGCCAGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHAWMRC*TLPALA
Trigger: CGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGC...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAACCTGGAAGAGCGGCCTaGATGAGATGCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKPGRAA*MRCWTL
Trigger: CAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGG...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTCCCCACAACGTGACCTaGAAGAGCGGCCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAPHNVT*KSGLDE
Trigger: CTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGG...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCCCATTGGCCATCAATaGCTGAGTGACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTPIGHQ*LSDQKS
Trigger: GGACTTCTGGTCACTCAGCCATTGATGGCCAATGGG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGAACTTCGCTCTGCCCTaGGAACTGGTTCCGACAGAA +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVNFALP*ELVPTE
Trigger: TTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTT...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAACTTCGCTCTGCCCTaGGAACTGGTTCCGACAGAA +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQINFALP*ELVPTE
Trigger: TTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTT...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTTCAAGTTCCGGCAGTaGTATCTACGATCACTGAAC +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHFKFRQ*YLRSLN
Trigger: GTTCAGTGATCGTAGATACCACTGCCGGAACTTGAA...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCAGCAAGTGCCGCTGCTaGGCAGTCTTTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCSKCRC*AVFLQL
Trigger: GAGCTGCAAAAAGACTGCCCAGCAGCGGCACTTGCT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACCTTGGCCACTGTGTCTaGACAAAGAGCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHLGHCV*TKSCRS
Trigger: GCTGCGGCAGCTCTTTGTCCAGACACAGTGGCCAAG...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCGTACCATTTGAGTTaGCCGTTCTTCAGTGCGTAC +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGSYHLS*PFFSAY
Trigger: GTACGCACTGAAGAACGGCCAACTCAAATGGTACGA...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTTCGTACCATTTGAGTTaGCCGTTCTTCAGTGCGTAC +
Preference number: 4 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHISYHLS*PFFSAY
Trigger: GTACGCACTGAAGAACGGCCAACTCAAATGGTACGA...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCCWELI*VLSQRF
Trigger: GAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCA...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTATGTCTGCCACGGCTCTaGTCTCCTCCCCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLCLPRL*SPPPFS
Trigger: AGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGACA...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAACAAAGGGCTCTGAGCTaGCCTCAGGGACACGGGGCT +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEQRALS*PQGHGA
Trigger: AGCCCCGTGTCCCTGAGGCCAGCTCAGAGCCCTTTG...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTACACCGGCCAGACCCTaGGGTGGGAGCCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGTPARP*GGSHGH
Trigger: GTGCCCGTGGCTCCCACCCCAGGGTCTGGCCGGTGT...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATCTGGTACTTGTGGCTTaGCACTCTGGGAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDLVLVA*HSGKQV
Trigger: CACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAG...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCACTGGAGGTGAGGCACTaGGTGGTTTCTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPLEVRH*VVSQTP
Trigger: GGGTGTCTGAGAAACCACCCAGTGCCTCACCTCCAG...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCAGCTAGTGCCCATGGCTaGGTCACTGTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPASAHG*VTVGPA
Trigger: TGCAGGACCTACAGTGACCCAGCCATGGGCACTAGC...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CCTGCCCCTAGGCCACTGACTGAGCAGGATAAAACCCACAAGGGCACATCTCAGGCTGGGCTCCTTACATaGGCATTCTTGCCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: PAPRPLTEQDKTHKGTSQAGLLT*AFLPFV
Trigger: TACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGC...CTGAGATGTGCCCTTGTGGGTTTTATCCTGCTCAGTCAGTGGCCTAGGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCACTGTGCACGACTGGCTaGATTCAGGGTTTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPLCTTG*IQGFAP
Trigger: GGGGGCAAAACCCTGAATCCAGCCAGTCGTGCACAG...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTTGTGCTAGAGAGCACAGTGTaGAGTCCTTGTGTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLPSLIAQKSGHREQGFVLESTV*SPCVKV
Trigger: CACCTTGACACAAGGACTCCACACTGTGCTCTCTAG...CACAAAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACTGAGGAGTAGGGACTaGCGCTCCTCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAALRSRD*RSSLLL
Trigger: CAGCAGGAGTGAGGAGCGCCAGTCCCTACTCCTCAG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp ACGACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTaGAGTACCTCCTACAATGTCCCTTTAAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: TTGWIQGFAPKP*STSYNVPLSTC
Trigger: GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAEERPG*DAGHCQ
Trigger: CTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTT +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGAPFQS*QLFMRF
Trigger: AAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGGCCCGTCACTTTTGTaGGATGTTCAACTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTGPSLL*DVQLRS
Trigger: AGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGATGATGATGGAACTGTaGTCTCCAGGTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGMMMEL*SPGIIA
Trigger: AGCGATGATACCTGGAGATCACAGTTCCATCATCAT...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCTGCCATTGGCTTCAGTaGCCCTCAGGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCCHWLQ*PSGSSG
Trigger: ACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCA...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPDPSGP*WSHSPG
Trigger: ACCAGGACTATGACTCCATCATGGCCCAGACGGGTC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAACCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQPDCGR*GAPVTQ
Trigger: CTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGG...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGTTGCCCCCAAACCCTTaGGTACCTCCTACAATGTCC +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLLPPNP*VPPTMS
Trigger: GGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAA...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTTTGCCCTGGAAGACTTaGCTATGTGGGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSLPWKT*LCGPSC
Trigger: ACATGAAGGCCCACATAGTCAAGTCTTCCAGGGCAA...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGACAATGGAGCTTTTCTaGGATCAAGTGCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVTMELF*DQVLPK
Trigger: TTTGGGGAGCACTTGATCTCAGAAAAGCTCCATTGT...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGAATTCAGTCTGTTTCTaGGCTTCTGGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWNSVCF*ASGCPL
Trigger: CAGAGGGCAGCCAGAAGCTCAGAAACAGACTGAATT...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421422.1
CDS-3UTR GCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTCTGGGGGCAGATCCTaGTGGGGTCCTTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTSGGRS*WGPSGK
Trigger: CTTGCCTGAAGGACCCCAGCAGGATCTGCCCCCAGA...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR GCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGTCTAAAGTGCTCCGATaGCCATTGGCCAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVSKVLR*PLASVE
Trigger: CTCTACACTGGCCAATGGGCATCGGAGCACTTTAGA...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTAATAGCCATCTAAAGTaGTCCGATGCCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: LKHHQCFLPKALALSLGSNSHLK*SDAHWP
Trigger: TGGCCAATGGGCATCGGAGCACTTTAGATGGCTATT...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCC +
Preference number: 4 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSLLKSV*SEFICP
Trigger: GGGACATATGAACTCAGAGCACACAGACTTTAATAA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGACCAGCTGATCCCCTaGTTCAGCCTTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLADQLIP*FSLWAV
Trigger: CACAGCCCAAAGGCTGAAGCAGGGGATCAGCTGGTC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGCGGCCTGGATGAGATaGTGGACATTGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCAAWMR*WTLPAL
Trigger: CAGTGCTGGCAATGTCCAGCATCTCATCCAGGCCGC...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGAGAGGGGAACTTGTTaGTTGCAACCCATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTERGTC*LQPIGH
Trigger: ATGGCCAATGGGTTGCAAGCAACAAGTTCCCCTCTC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp GGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCTGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: GALSCTITTKPQGPGKPSWLLSE*RLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCA...GGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGCTGACTTTGCGCTCTaGCAAGATATGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAADFAL*QDMAAG
Trigger: CCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGC...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTCGCAGCAAGTGCCGCTaGTGGGCAGTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPRSKCR*WAVFLQ
Trigger: CTGCAAAAAGACTGCCCAGCAGCGGCACTTGCTGCG...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTCTTCAGTGCGTACCTaGTATCTCCAAACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTSSVRT*YLQTSA
Trigger: TGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGA...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATACTCACTGCCTGTGTCTaGCACGGCTCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRILTACV*HGSGLL
Trigger: GAGGAGACCAGAGCCGTGGCAGACACAGGCAGTGAG...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCAGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCATCTCTTCAAAGGTACTaGTTCCTTGAGGAACACAAA +
Preference number: 4 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPSLQRY*FLEEHK
Trigger: TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGA...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTCTAGCACTGTCACTCTaGCCAGCCCAGGAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCLALSL*PAQEVS
Trigger: AGACACCTCCTGGGCTGGGCAGAGTGACAGTGCTAG...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACACCACCAGTGCTTCTTaGCCAAAGCCCTTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHTTSAS*PKPLPS
Trigger: AGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGT...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AACCAAGTGCAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCAATAGGCTGCAAAACTTaGCAAGTACTCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: NQVQTLGEFRDHLVSPAPIGCKT*QVLTSP
Trigger: GGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT...TGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTGGTCACTGTAGGTCCTaGATGAACTTGTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSGHCRS*MNLSTN
Trigger: GTTGGTGGACAAGTTCATGCAGGACCTACAGTGACC...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTCTGGATTCAGGGTTTTaGCCCCAAACCCTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMALDSGF*PQTLEY
Trigger: GTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAG...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATATCCCACATCCCCCACTaGCACTGGGCTAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRISHIPH*HWASVG
Trigger: ACCCACACTAGCCCAGTGGCAGTGGGGGATGTGGGA...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACATCCCACATCCCCCACTaGCACTGGGCTAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTSHIPH*HWASVG
Trigger: ACCCACACTAGCCCAGTGGCAGTGGGGGATGTGGGA...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCATCCCACATCCCCCACTaGCACTGGGCTAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRASHIPH*HWASVG
Trigger: ACCCACACTAGCCCAGTGGCAGTGGGGGATGTGGGA...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAACAACCGGATTGCTGTaGTGGGTCCCTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAATTGLL*WVPAEE
Trigger: CTCCTCAGCAGGGACCCAGCACAGCAATCCGGTTGT...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TGGTGGGACGGCCTCCCAAGGCTAGCTGGAGATGAGACCACTAGTACATGTGTGGAGATGGGACCCTCTTaGAGAGTTTGGCTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: WWDGLPRLAGDETTSTCVEMGPS*RVWLKF
Trigger: AAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTC...CACACATGTACTAGTGGTCTCATCTCCAGCTAGCCTTGGGAGGCCGTCCCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCGGATCATGCATGGTGTaGTGGATTTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIGSCMV*WISSCW
Trigger: CCAGCAAGAGGAAATCCACCACACCATGCATGATCC...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCCACCACAGTCTTCACTaGGATCATGCATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFHHSLH*DHAWCG
Trigger: ACCACACCATGCATGATCCCAGTGAAGACTGTGGTG...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAAGPPC*HLATPQ
Trigger: CTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGGGCAGCAGATGCTTCTaGGGGCAGATCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQGSRCF*GQILLG
Trigger: CCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCC...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGGCAGCAGATGCTTCTaGGGGCAGATCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVGSRCF*GQILLG
Trigger: CCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAAATTGGGTCATGTCATaGGATCTGAAATCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRNWVMS*DLKSQY
Trigger: ATACTGCGATTTCAGATCCCATGACATGACCCAATT...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCCTCACCCACAGGCTaGCTAGGGACATTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAASPTG*LGTFSL
Trigger: CAAGGAGAATGTCCCTAGCCAGCCTGTGGGTGAGGC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTAGTGGCTGGTGGACATaGTGTTGGGCATGCACTGGG +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPSGWWT*CWACTG
Trigger: CCCAGTGCATGCCCAACACCATGTCCACCAGCCACT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGSRARL*WGRGTC
Trigger: ACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAGGACATTGCCAGCACTaGCGACGAGTGGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKGHCQH*RRVGYL
Trigger: TAAATACCCCACTCGTCGCCAGTGCTGGCAATGTCC...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGGCCTGGATGAGATGCTaGACATTGCCAGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLAWMRC*TLPALA
Trigger: CGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGC...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGCCTGGATGAGATGCTaGACATTGCCAGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAAWMRC*TLPALA
Trigger: CGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACCCTGGAAGAGCGGCCTaGATGAGATGCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHPGRAA*MRCWTL
Trigger: CAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGG...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTAATGGGTGCCACACCTaGCTGCTTGGGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTANGCHT*LLGDGC
Trigger: ACATCCGTCCCCAAGCAGCCAGGTGTGGCACCCATT...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTCTCTGCCCTGGGAACTaGTTCCGACAGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCLCPGN*FRQKLP
Trigger: AGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAG...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAAACTTCGCTCTGCCCTaGGAACTGGTTCCGACAGAA +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKNFALP*ELVPTE
Trigger: TTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTT...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAARDLGR*GEGHLW
Trigger: CCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCT...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAATTACCTCAGGGACCTTaGACGATGGGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKLPQGP*TMGRRT
Trigger: TGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAA...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTATTACCTCAGGGACCTTaGACGATGGGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLLPQGP*TMGRRT
Trigger: TGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAA...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAGGLLV*LLSECR
Trigger: CCTGCATTCCGACAACAGCCACACTAGCAACCCACC...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCGCTCTGCCAAGATATaGCTGCTGGGCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVRSAKI*LLGISR
Trigger: TCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCG...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGGCAGCTCACTTTGCCTaGGAGCTGCTCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWAAHFA*ELLCQF
Trigger: AAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGC...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAAGCAAGTGCCGCTGCTaGGCAGTCTTTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRSKCRC*AVFLQL
Trigger: GAGCTGCAAAAAGACTGCCCAGCAGCGGCACTTGCT...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAACCAGCGCACCACCTCTaGCCGTGGCAGACCCGTCTG +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQPAHHL*PWQTRL
Trigger: CAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGG...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATACCAGTACCAGGGCCCTaGTCCTCACTGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIPVPGP*SSLPVS
Trigger: AGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGG...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTAAGATGTGGTCCCTATTaGGACAGGGAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLRCGPY*DREGRR
Trigger: TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCT...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTAGCTGCCTAGTGCACTaGTGTCCCTCCAACACAGGC +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTASCLVH*CPSNTG
Trigger: GCCTGTGTTGGAGGGACACCAGTGCACTAGGCAGCT...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTCTGTGCACGACTGGCTaGATTCAGGGTTTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCLCTTG*IQGFAP
Trigger: GGGGGCAAAACCCTGAATCCAGCCAGTCGTGCACAG...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAGGGCTACATACCTaGCTGCTGCCATCCCACATC +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGTGLHT*LLPSHI
Trigger: GATGTGGGATGGCAGCAGCCAGGTATGTAGCCCTGT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAAGAGAGATTTCCTGGTaGGACGGCCTCCCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRREISW*DGLPRL
Trigger: TAGCCTTGGGAGGCCGTCCCACCAGGAAATCTCTCT...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCCCTCCTGGTGTGACCTaGCACTGGGAACACACAGAT +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGPPGVT*HWEHTD
Trigger: ATCTGTGTGTTCCCAGTGCCAGGTCACACCAGGAGG...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTACGAGACCAAACAGTATaGGCAGGAACCAGGGATGAG +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLRDQTV*AGTRDE
Trigger: CTCATCCCTGGTTCCTGCCCATACTGTTTGGTCTCG...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGTCTCATGTGGGGCTCTaGCCCTGTTCCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQSHVGL*PCSKQT
Trigger: AGTTTGCTTGGAACAGGGCCAGAGCCCCACATGAGA...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAAAAGTCTGTGTGCTCTaGGTTCATATGTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRKVCVL*VHMSHK
Trigger: TTTGTGGGACATATGAACTCAGAGCACACAGACTTT...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGGCTGCCCCACAACGTaGCCTGGAAGAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTGCPTT*PGRAAW
Trigger: CCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAGGCTGCCCCACAACGTaGCCTGGAAGAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRGCPTT*PGRAAW
Trigger: CCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCC...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAACCATCAATGGCTGAGTaGCCAGAAGTCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEPSMAE*PEVPLL
Trigger: CAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGG...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTT +
Preference number: 4 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRAPFQS*QLFMRF
Trigger: AAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGC...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAGGCCCGTCACTTTTGTaGGATGTTCAACTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKGPSLL*DVQLRS
Trigger: AGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCC...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCTGTATTTGGTTGGTGTaGAGTCAGGAGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TSYNVPLSTCVMTASLIICIWLV*SQESGA
Trigger: GGCACCAGACTCCTGACTTCACACCAACCAAATACA...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCGTTCTCAGACACCTCTaGATAGGTGTCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGVLRHL*IGVTHP
Trigger: GGGATGGGTGACACCTATTCAGAGGTGTCTGAGAAC...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWKVLLP*GTQRGH
Trigger: GTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTT...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCACTGTAGGTCCTGCATaGACTTGTCCACCAACTGTG +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCTVGPA*TCPPTV
Trigger: CACAGTTGGTGGACAAGTTCATGCAGGACCTACAGT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCCACAGGAGAAAGGCTTaGGCTCCACAACTGCCCATT +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGHRRKA*APQLPI
Trigger: AATGGGCAGTTGTGGAGCTCAAGCCTTTCTCCTGTG...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCGCTCCTCACTCCTGCTaGCAATCTCATGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTAPHSC*QSHVGL
Trigger: GAGCCCCACATGAGATTGTCAGCAGGAGTGAGGAGC...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGAAATAATCAAAAGGTTTaGAGTACCATTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: CGSRESGLALPRGRRFPRNNQKV*STIEAH
Trigger: ATGGGCCTCAATGGTACTTCAAACCTTTTGATTATT...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCAATAATCAAAAGGTTTaGAGTACCATTGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSNNQKV*STIEAH
Trigger: ATGGGCCTCAATGGTACTTCAAACCTTTTGATTATT...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAGACCAGGAACCGAGCTaGCGTCCAGCCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQDQEPS*RPAWGL
Trigger: GAGTCCCCAGGCTGGACGTCAGCTCGGTTCCTGGTC...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421422.1
CDS-3UTR GCA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATGCTTTTTCAGTTGTTTaGAGAAAGCAGGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLALPRGRRFPRLASPSHAFSVV*RKQVFP
Trigger: AGGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGC...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTCTGTGCTGCCTCACTaGTGGCAGCAGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPSVLPH*WQQMLL
Trigger: CAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGA...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGAGAGGAACTGTGCTATaGCAGCTGGCAAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLRGTVL*QLAKLA
Trigger: TGCCAGTTTTGCCAGCTGGCATAGCACAGTTCCTCT...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACGAGGGAGAGGAACTGTaGTATGCCAGCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHEGEEL*YASWQN
Trigger: GTTTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTC...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR GCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGATGCACTGGGGGCTGCTaGTGGAGGGAGAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRCTGGC*WRERNC
Trigger: ACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCA...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTGTACGTTGGAATGCTaGTCAGGGGGATCATCACTT +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTCTLEC*SGGSSL
Trigger: AAGTGATGATCCCCCTGAGCAGCATTCCAACGTACA...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCTGTACGTTGGAATGCTaGTCAGGGGGATCATCACTT +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQICTLEC*SGGSSL
Trigger: AAGTGATGATCCCCCTGAGCAGCATTCCAACGTACA...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCCATTGTACGTTGGAATaGTGCTCAGGGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIHCTLE*CSGGSS
Trigger: TGATGATCCCCCTGAGCAGCATTCCAACGTACAATG...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLCSTSL*PGNWFR
Trigger: TCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACA...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWWLLSE*RLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCA...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGAAGTCAGGAGTCTGGTaGCAAGATTGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVKSGVW*QDCRLA
Trigger: TGCCAAACGACAATCTTGGCACCAGACTCCTGACTT...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCTCTTCAGTGCGTACCTaGTATCTCCAAACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: TSYNVPLSTCVMTASLIISSVRT*YLQTSA
Trigger: TGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGA...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCCCTGGTGGGAAGTTaGCTCGCTTATAGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLALVGS*LAYSLR
Trigger: ACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGC...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTCTCAGCAAACCACTaGTTGACCTGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAFSANH*LTCWEL
Trigger: GAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAA...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGGCCCTGGTCCTCACTaGCTGTGTCTGCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPGPGPH*LCLPRL
Trigger: GAGCCGTGGCAGACACAGGCAGTGAGGACCAGGGCC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATACCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAACCCCATCTTGCTTaGTGCTTGCTTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAEPHLA*CLLGGG
Trigger: CCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTCTGCCAGGGATCTCTaGATGCAAGTCTTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTSARDL*MQVFVL
Trigger: TAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGA...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATAGCACTCTGGGTGTTCTaGCAGGGATCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIALWVF*QGSLHA
Trigger: TGCATGCAGAGATCCCTGGCAGAACACCCAGAGTGC...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTCTAAAACACCACCAGTaGTTCTTGCCCAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSLKHHQ*FLPKAL
Trigger: AAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCACTGCACACGCCAGATaGGCGTTTTACGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFTAHAR*AFYENQ
Trigger: TTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGT...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGGTCACTGTAGGTCCTaGATGAACTTGTCCACCAAC +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCGHCRS*MNLSTN
Trigger: GTTGGTGGACAAGTTCATGCAGGACCTACAGTGACC...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCACACCTGCGTGATGACTaGCTCCCTCATCATCGCTTT +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPHLRDD*LPHHRF
Trigger: AAAGCGATGATGAGGGAGGCAGTCATCACGCAGGTG...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTCCCTTTAAGCACCTaGGTGATGACTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCVPLST*VMTASL
Trigger: GAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGAC...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATACATACCTGGCTGCTaGCATCCCACATCCCCCACT +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAYIPGC*HPTSPT
Trigger: AGTGGGGGATGTGGGATGGCAGCAGCCAGGTATGTA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGGCTACATACCTGGCTaGTGCCATCCCACATCCCCC +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRGYIPG*CHPTSP
Trigger: GGGGGATGTGGGATGGCAGCAGCCAGGTATGTAGCC...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGATCTGACGAGTCCAACTaGATACAGAGAAAAGGGATA +
Preference number: 4 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRSDESN*IQRKGI
Trigger: TATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGA...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGGTCCTTGTGTCAAGGTaGTTTGGTCCACCTGAACAG +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQVLVSR*FGPPEQ
Trigger: CTGTTCAGGTGGACCAAAGCACCTTGACACAAGGAC...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCCTTGAGCTCCACAACTaGCCATTTGCTCAGACAATG +
Preference number: 4 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCLELHN*PFAQTM
Trigger: CATTGTCTGAGCAAATGGGCAGTTGTGGAGCTCAAG...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTAAAATCAAAACTGGTTaGCTCACCAGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAKIKTG*LTSPGV
Trigger: CACACCAGGGCTGGTGAGGCAACCAGTTTTGATTTT...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCATCCTCAAAGTCCTaGGAACCCAAAGATAGAACT +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGSSSKS*EPKDRT
Trigger: AGTTCTATCTTTGGGTTCGCAGGACTTTGAGGATGA...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGTGTTGCTTCTGCAGTTaGATTTCAGTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVCCFCS*ISVLLG
Trigger: CCCAAGGAGGACTGAAATGCAACTGCAGAAGCAACA...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGGATCATGCATGGTGTaGTGGATTTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCGSCMV*WISSCW
Trigger: CCAGCAAGAGGAAATCCACCACACCATGCATGATCC...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCCACTGGGATCATGCATaGTGTGGTGGATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFHWDHA*CGGFPL
Trigger: AAGAGGAAATCCACCACACCATGCATGATCCCAGTG...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCCACCACAGTCTTCACTaGGATCATGCATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCHHSLH*DHAWCG
Trigger: ACCACACCATGCATGATCCCAGTGAAGACTGTGGTG...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQKVSAG*ASMLAS
Trigger: AGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTT...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGGTGCTGCCTCACTGCTaGCAGCAGATGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQVLPHC*QQMLLG
Trigger: CCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCAC...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCATATGTCCCACAAATTaGGTCATGTCATGGGATCTG +
Preference number: 4 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCICPTN*VMSWDL
Trigger: CAGATCCCATGACATGACCCAATTTGTGGGACATAT...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CCA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAACTGCATACAAAGGTTaGGTCTTTATTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: QPGMGTACGSRESGLALPTAYKG*VFIKVC
Trigger: ACAGACTTTAATAAAGACCCAACCTTTGTATGCAGT...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTCCCCGGAGTGACATGTaGCATTGTGCAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPPRSDM*HCARKA
Trigger: GGCTTTCCTTGCACAATGCCACATGTCACTCCGGGG...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAARSTQS*LPRSDM
Trigger: CATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAAGCIVR*NAAQGD
Trigger: ATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCC...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGGACATTGCCAGCACTaGCGACGAGTGGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLGHCQH*RRVGYL
Trigger: TAAATACCCCACTCGTCGCCAGTGCTGGCAATGTCC...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGCCCATTGGCCATCAATaGCTGAGTGACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWPIGHQ*LSDQKS
Trigger: GGACTTCTGGTCACTCAGCCATTGATGGCCAATGGG...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFVKSGV*CQDCRL
Trigger: CAAACGACAATCTTGGCACCAGACTCCTGACTTCAC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTACAGGCACCCAGCCCTaGAATCTCGTTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTATGTQP*NLVPAI
Trigger: AATGGCAGGAACGAGATTCCAGGGCTGGGTGCCTGT...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTAGCAAGTGCCGCTGCTaGGCAGTCTTTTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPSKCRC*AVFLQL
Trigger: GAGCTGCAAAAAGACTGCCCAGCAGCGGCACTTGCT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGATAGTCCTGGTTGCTTaGCCACTGTGTCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRIVLVA*PLCLDK
Trigger: TTTGTCCAGACACAGTGGCCAAGCAACCAGGACTAT...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCATAGTCCTGGTTGCTTaGCCACTGTGTCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIIVLVA*PLCLDK
Trigger: TTTGTCCAGACACAGTGGCCAAGCAACCAGGACTAT...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGATAGTCCTGGTTGCTTaGCCACTGTGTCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTIVLVA*PLCLDK
Trigger: TTTGTCCAGACACAGTGGCCAAGCAACCAGGACTAT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACCACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNHHLWP*QTRLGH
Trigger: ATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTG...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCTCGTACCATTTGAGTTaGCCGTTCTTCAGTGCGTAC +
Preference number: 4 (lower is better)
Translates to: FHVAGGFPDWPVLHINQISYHLS*PFFSAY
Trigger: GTACGCACTGAAGAACGGCCAACTCAAATGGTACGA...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGTCGTACCATTTGAGTTaGCCGTTCTTCAGTGCGTAC +
Preference number: 4 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVSYHLS*PFFSAY
Trigger: GTACGCACTGAAGAACGGCCAACTCAAATGGTACGA...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGAAGCCTGGTACTTGTaGCTTGGCACTCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCEAWYL*LGTLGS
Trigger: GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTC...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATACCCTTGCCCTCTCTCTaGGGTCTTCTAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIPLPSL*GLLALS
Trigger: TGACAGTGCTAGAAGACCCCAGAGAGAGGGCAAGGG...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCACTGGAGGTGAGGCACTaGGTGGTTTCTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRALEVRH*VVSQTP
Trigger: GGGTGTCTGAGAAACCACCCAGTGCCTCACCTCCAG...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAGCTAGTGCCCATGGCTaGGTCACTGTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTASAHG*VTVGPA
Trigger: TGCAGGACCTACAGTGACCCAGCCATGGGCACTAGC...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGCTGGGCTCCTTACATaGGCATTCTTGCCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFAGLLT*AFLPFV
Trigger: TACAAAAGGCAAGAATGCCCATGTAAGGAGCCCAGC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAATCTGTCCAGACTGCTaGGCTCCTTACATGGGCATT +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLICPDC*APYMGI
Trigger: AATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGAT...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAGTCTCTGTGCACGACTaGCTGGATTCAGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRVSVHD*LDSGFC
Trigger: GCAAAACCCTGAATCCAGCCAGTCGTGCACAGAGAC...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGCCACTGGGCTAGTGTaGGTGTGTCTCTGTGCACGA +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEATGLV*VCLCAR
Trigger: TCGTGCACAGAGACACACCCACACTAGCCCAGTGGC...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCACCTGGGTGGGCTGCTaGCTTTGCCCTGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTTWVGC*LCPGRL
Trigger: AAGTCTTCCAGGGCAAAGCCAGCAGCCCACCCAGGT...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATAAGAGGTCAGATTTGTaGGCAGGCAAGAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDKRSDL*AGKSSG
Trigger: TCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTT...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCAAGAGGTCAGATTTGTaGGCAGGCAAGAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCKRSDL*AGKSSG
Trigger: TCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp CTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTaGCAGAGTTTGGCTAAAGTTTCATTGTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LSHLAMAGDGTL*QSLAKVSLCLK
Trigger: TTTGAGGCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTACCGTAATTGTGGGCTaGGGCACAGACTGGATGACT +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLATVIVG*GTDWMT
Trigger: AGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGT...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACCATCAATGGCTGAGTaGCCAGAAGTCCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVPSMAE*PEVPLL
Trigger: CAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGG...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTGCGACTGGGCCGCATTaGCCACCTTCACAGCTGACG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLATGPH*PPSQLT
Trigger: CGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGC...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGTTCTCAGACACCTCTaGATAGGTGTCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAVLRHL*IGVTHP
Trigger: GGGATGGGTGACACCTATTCAGAGGTGTCTGAGAAC...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCCTGACTGTGGAAGGTaGGGGGCACCTGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLPDCGR*GAPVTQ
Trigger: CTGGGTCACAGGTGCCCCTCACCTTCCACAGTCAGG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCAAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPKASLT*NVAGHH
Trigger: GTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTT...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTGGAGAAAGGGCTCTaGAAACCGCAGTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCVEKGL*KPQWSK
Trigger: CTTTGACCACTGCGGTTTTCAGAGCCCTTTCTCCAC...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGTGGAGAAAGGGCTCTaGAAACCGCAGTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAVEKGL*KPQWSK
Trigger: CTTTGACCACTGCGGTTTTCAGAGCCCTTTCTCCAC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATTTCCACCTGAAAGATaGGCTAGTGCCCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAFPPER*ASAHGW
Trigger: CCAGCCATGGGCACTAGCTCATCTTTCAGGTGGAAA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CCCAAGGCCCTGGCAAGCCATCCAACTAGGGCGTTCTTTTTCAGGAACCCAAGAAAAGCTGCACCAATCTaGGGATATTGGTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: PKALASHPTRAFFFRNPRKAAPI*GYWSKK
Trigger: CTTTTTGGACCAATATCCTCAGATTGGTGCAGCTTT...TCTTGGGTTCCTGAAAAAGAACGCCCTAGTTGGATGGCTTGCCAGGGCCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACCCACCCCTCCTGGTGTaGCCTGGCACTGGGAACACA +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNPPLLV*PGTGNT
Trigger: TGTGTTCCCAGTGCCAGGTCACACCAGGAGGGGTGG...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGGCAAGAGCTCAGGAATaGAGAACCAAAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQARAQE*RTKKEA
Trigger: AGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGC...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGCAAGAGCTCAGGAATaGAGAACCAAAAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCARAQE*RTKKEA
Trigger: AGCCTCCTTTTTGGTTCTTCATTCCTGAGCTCTTGC...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCTCAGTAAAACTCAATaGACAATGGCCAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQLSKTQ*TMASRG
Trigger: TCCCCTGCTGGCCATTGTTCATTGAGTTTTACTGAG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCCTCAGTAAAACTCAATaGACAATGGCCAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCLSKTQ*TMASRG
Trigger: TCCCCTGCTGGCCATTGTTCATTGAGTTTTACTGAG...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTGTTGCTTCTGCAGTTaGATTTCAGTCCTAAGCATA +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGCCFCS*ISVLSI
Trigger: TATGCTTAGGACTGAAATGCAACTGCAGAAGCAACA...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000560364.5
CDS-3UTR GCA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGGCTTTTTCAGTTGTTTaGAGAAAGCAGGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLKHHQCFLPKALALSLGAFSVV*RKQVFP
Trigger: AGGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGC...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAACGGGCTGGGCCTCCATaGTGGCATCTTGCAACACCA +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKRAGPP*WHLATP
Trigger: TGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCG...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCTGTGCTGCCTCACTaGTGGCAGCAGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSSVLPH*WQQMLL
Trigger: CAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGA...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTCTAAAGTGCTCCGATaGCCATTGGCCAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLSKVLR*PLASVE
Trigger: CTCTACACTGGCCAATGGGCATCGGAGCACTTTAGA...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATGGTGCTCTCAGGGATaGTCTGCTCCACAACCACAT +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAWCSQG*SAPQPH
Trigger: ATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAGGTAATGATGATTTCTaGCTGTCCATCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKGNDDF*LSISPF
Trigger: GAAGGGGCTGATGGACAGGCAGAAATCATCATTACC...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTATGTACGTTGGAATGCTaGTCAGGGGGATCATCACTT +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLCTLEC*SGGSSL
Trigger: AAGTGATGATCCCCCTGAGCAGCATTCCAACGTACA...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCATTGTACGTTGGAATaGTGCTCAGGGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVHCTLE*CSGGSS
Trigger: TGATGATCCCCCTGAGCAGCATTCCAACGTACAATG...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGGAGAGGGGAACTTGTTaGTTGCAACCCATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWERGTC*LQPIGH
Trigger: ATGGCCAATGGGTTGCAAGCAACAAGTTCCCCTCTC...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGGTGCCACACCTGGCTaGTTGGGGACGGATGTCACC +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPGATPG*LGTDVT
Trigger: GGTGACATCCGTCCCCAAGCAGCCAGGTGTGGCACC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTTGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAWLLSE*RLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCA...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAAAGTCAGGAGTCTGGTaGCAAGATTGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKKSGVW*QDCRLA
Trigger: TGCCAAACGACAATCTTGGCACCAGACTCCTGACTT...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAATLPGS*SASLFD
Trigger: GTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGT...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAAACCACTGCTTGACCTaGTGGGAGCTCATCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTNHCLT*WELIWV
Trigger: GACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTT...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTTTCTCAGCAAACCACTaGTTGACCTGCTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCFSANH*LTCWEL
Trigger: GAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAA...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGCATCCCTTTGTGAACTaGTGTGAGCTCACCAGTACC +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWHPFVN*CELTST
Trigger: GGTACTGGTGAGCTCACAGCAGTTCACAAAGGGATG...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTATCTGCCAGGGATCTCTaGATGCAAGTCTTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLSARDL*MQVFVL
Trigger: TAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGA...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGTCTGCCAGGGATCTCTaGATGCAAGTCTTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLSARDL*MQVFVL
Trigger: TAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGA...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTATCTGCCAGGGATCTCTaGATGCAAGTCTTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLSARDL*MQVFVL
Trigger: TAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGA...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTAGCACTGTCACTCTaGCCAGCCCAGGAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVLALSL*PAQEVS
Trigger: AGACACCTCCTGGGCTGGGCAGAGTGACAGTGCTAG...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCATAGGCTGCAAAACTTaGCAAGTACTCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCIGCKT*QVLTSP
Trigger: GGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCATAGGCTGCAAAACTTaGCAAGTACTCACAAGTCCC +
Preference number: 4 (lower is better)
Translates to: QVDRSLVRPSLPATLRATIGCKT*QVLTSP
Trigger: GGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCACTGCACACGCCAGATaGGCGTTTTACGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVTAHAR*AFYENQ
Trigger: TTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGT...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCACAACTCTTCAGCCAGTaGATGCAGGGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAQLFSQ*MQGSGG
Trigger: ACCTCCAGAGCCCTGCATGCACTGGCTGAAGAGTTG...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGATCTGTCCAGACTaGTGGGCTCCTTACATGGGC +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIRICPD*WAPYMG
Trigger: GCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCT...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTCACCTGCGTGATGACTaGCTCCCTCATCATCGCTTT +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAHLRDD*LPHHRF
Trigger: AAAGCGATGATGAGGGAGGCAGTCATCACGCAGGTG...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCGTGGGTGTGTCTCTGTaGACGACTGGCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSVGVSL*TTGWIQ
Trigger: CTGAATCCAGCCAGTCGTGCACAGAGACACACCCAC...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACGTCCTTGTGTCAAGGTaGTTTGGTCCACCTGAACAG +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHVLVSR*FGPPEQ
Trigger: CTGTTCAGGTGGACCAAAGCACCTTGACACAAGGAC...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCTTGAGCTCCACAACTaGCCATTTGCTCAGACAATG +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQLELHN*PFAQTM
Trigger: CATTGTCTGAGCAAATGGGCAGTTGTGGAGCTCAAG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAAACTTCACAACCAAGTaGAGACGCTCGGTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLNFTTK*RRSVSS
Trigger: TGAACTCACCGAGCGTCTGCACTTGGTTGTGAAGTT...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAACTCCCTTCGCTCAGCTaGCAGAGCAGCCACGAAAGC +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKLPSLS*QSSHES
Trigger: GCTTTCGTGGCTGCTCTGGCAGCTGAGCGAAGGGAG...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGGGGGCAGATCCTGCTaGGGTCCTTCAGGCAAGGTC +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCGGRSC*GPSGKV
Trigger: GACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTAACCACATGATTGTCTaGCTTGGCCACGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: RSYIVGGRTDENPILLAANHMIV*LGHVPH
Trigger: GTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTT...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACCAGCCCCTTCAGCACTaGGCTCACCCGCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNQPLQH*AHPLGQ
Trigger: CTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTG...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTCAGCCCCTTCAGCACTaGGCTCACCCGCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGQPLQH*AHPLGQ
Trigger: CTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTG...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCCCTGCTTCAGCCTTTaGGCTGTGAACCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLPCFSL*AVNQIL
Trigger: CAAGATCTGGTTCACAGCCCAAAGGCTGAAGCAGGG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGGCCTGGATGAGATGCTaGACATTGCCAGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQAWMRC*TLPALA
Trigger: CGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGC...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACCCATTGGCCATCAATaGCTGAGTGACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAPIGHQ*LSDQKS
Trigger: GGACTTCTGGTCACTCAGCCATTGATGGCCAATGGG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATACCCATTGGCCATCAATaGCTGAGTGACCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIPIGHQ*LSDQKS
Trigger: GGACTTCTGGTCACTCAGCCATTGATGGCCAATGGG...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQAVRSD*AALTTF
Trigger: GAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGC...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAAACTTCGCTCTGCCCTaGGAACTGGTTCCGACAGAA +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAANFALP*ELVPTE
Trigger: TTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTT...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGG +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVRDLGR*GEGHLW
Trigger: CCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCT...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATTACCTCAGGGACCTTaGACGATGGGGAGAAGGACA +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAALPQGP*TMGRRT
Trigger: TGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTLLVFG*CEVRSL
Trigger: CAGACTCCTGACTTCACACCAACCAAATACAAGGAG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTCTCGTCGGGTCATTTTaGTTTCACTTCTCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLLVGSF*FHFSGG
Trigger: ACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAG...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCACAGGCACCCAGCCCTaGAATCTCGTTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTTGTQP*NLVPAI
Trigger: AATGGCAGGAACGAGATTCCAGGGCTGGGTGCCTGT...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAGCAGCTCACTTTGCCTaGGAGCTGCTCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIAAHFA*ELLCQF
Trigger: AAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGC...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAATCGTACCATTTGAGTTaGCCGTTCTTCAGTGCGTAC +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKSYHLS*PFFSAY
Trigger: GTACGCACTGAAGAACGGCCAACTCAAATGGTACGA...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLCWELI*VLSQRF
Trigger: GAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTCAAAGGGCTCTGAGCTaGCCTCAGGGACACGGGGCT +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGQRALS*PQGHGA
Trigger: AGCCCCGTGTCCCTGAGGCCAGCTCAGAGCCCTTTG...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTCCCAGCAGCCGGGCATaGGAACGGCATGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTPSSRA*ERHVAA
Trigger: TGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATAAGATGTGGTCCCTATTaGGACAGGGAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIRCGPY*DREGRR
Trigger: TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCT...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGGAGACAAATAAGATGTaGTCCCTATTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRETNKM*SLLGQG
Trigger: TCCCTGTCCCAATAGGGACCACATCTTATTTGTCTC...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCTGTAGCCCTGGCTGTTaGGCAGGGCTAACATCTATA +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGCSPGC*AGLTSI
Trigger: TATAGATGTTAGCCCTGCCCAACAGCCAGGGCTACA...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGATCCCCCACTGCCACTaGGCTAGTGTGGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQIPHCH*ASVGVS
Trigger: AGACACACCCACACTAGCCCAGTGGCAGTGGGGGAT...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAACAGGGCTACATACCTaGCTGCTGCCATCCCACATC +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRITGLHT*LLPSHI
Trigger: GATGTGGGATGGCAGCAGCCAGGTATGTAGCCCTGT...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGAAGACTTGACTATGTaGGCCTTCATGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFEDLTM*AFMCLE
Trigger: CTCTAGACACATGAAGGCCCACATAGTCAAGTCTTC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAGGTGTGACCTGGCACTaGGAACACACAGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTGVTWH*EHTDCS
Trigger: GCTGCAATCTGTGTGTTCCCAGTGCCAGGTCACACC...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCTCAGGGCAGTTAGAATaGATGACTCTGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: QVDRSLVRPSLPATLRATSGQLE*MTLLDL
Trigger: TAGATCCAGCAGAGTCATCCATTCTAACTGCCCTGA...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAGCTGACAATCTCATGTaGGGCTCTGGCCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAADNLM*GSGPVP
Trigger: TGGAACAGGGCCAGAGCCCCACATGAGATTGTCAGC...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp CCACCTGTCACTCAGCCAAGAGAAAGGAGCTTTAAGTaGTACAATCACTACCAAACCCCAAGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PPVTQPRERSFK*YNHYQTPRPWQ
Trigger: TTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCCTTTCTCTTGGCTGAGTGACAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp GCACAGGAGAAAGGCTTGAGCTCCACAACTGCCCATTaGCTCAGACAATGGAGCTTTTCTGAGATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: AQEKGLSSTTAH*LRQWSFSEIKC
Trigger: GCACTTGATCTCAGAAAAGCTCCATTGTCTGAGCAAATGGGCAGTTGTGGAGCTCAAGCCTTTCTCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp TGGCACTGGGAACACACAGATTGCAGCAGAAACCTGTaGGTTCCATTTGCACTCAGAGCAAACCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WHWEHTDCSRNL*VPFALRANQAA
Trigger: TGCTGCTTGGTTTGCTCTGAGTGCAAATGGAACCAACAGGTTTCTGCTGCAATCTGTGTGTTCCCAGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp GTTGAAGGACTGCGTCCCCATTCAAAGAGGTCAGATTaGTGGGCAGGCAAGAGCTCAGGAATGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: VEGLRPHSKRSD*WAGKSSGMKNQ
Trigger: TTGGTTCTTCATTCCTGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGAATGGGGACGCAGTCCTTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp CAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTaGGTCTCTCACACCTGGCCATGGCAGGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: QGLSDRVCCFLG*VSHTWPWQEMG
Trigger: TCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATAGTGACAATCACTGGGTaGTCAGCAGTTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIVTITG*SAVESL
Trigger: CAAGCTCTCAACTGCTGATCACCCAGTGATTGTCAC...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGGCTGCCCCACAACGTaGCCTGGAAGAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNGCPTT*PGRAAW
Trigger: CCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTT +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGAPFQS*QLFMRF
Trigger: AAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGC...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGGCCCGTCACTTTTGTaGGATGTTCAACTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAGPSLL*DVQLRS
Trigger: AGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGGCCCGTCACTTTTGTaGGATGTTCAACTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPGPSLL*DVQLRS
Trigger: AGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATATGATGATGGAACTGTaGTCTCCAGGTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDMMMEL*SPGIIA
Trigger: AGCGATGATACCTGGAGATCACAGTTCCATCATCAT...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTGTATTTGGTTGGTGTaGAGTCAGGAGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLCIWLV*SQESGA
Trigger: GGCACCAGACTCCTGACTTCACACCAACCAAATACA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAACTGTAGGTCCTGCATaGACTTGTCCACCAACTGTG +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAATVGPA*TCPPTV
Trigger: CACAGTTGGTGGACAAGTTCATGCAGGACCTACAGT...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTTGCCCCCAAACCCTTaGGTACCTCCTACAATGTCC +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTLPPNP*VPPTMS
Trigger: GGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAA...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLTAGVL*CLTAGS
Trigger: GCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGAACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRTAGVL*CLTAGS
Trigger: GCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGT...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTCTAAAGTGCTCCGATaGCCATTGGCCAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLSKVLR*PLASVE
Trigger: CTCTACACTGGCCAATGGGCATCGGAGCACTTTAGA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAAATAGCCATCTAAAGTaGTCCGATGCCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRNSHLK*SDAHWP
Trigger: TGGCCAATGGGCATCGGAGCACTTTAGATGGCTATT...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTCTGGCTGACTGGAACTaGCCCATTGATGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLALADWN*PIDEGM
Trigger: CATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAG...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATAAGAGGAACTGTGCTATaGCAGCTGGCAAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIRGTVL*QLAKLA
Trigger: TGCCAGTTTTGCCAGCTGGCATAGCACAGTTCCTCT...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR GCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGGGGAACTTGTTGCTTaGAACCCATTGGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLGELVA*NPLAIN
Trigger: ATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCC...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGAGAGGGGAACTTGTTaGTTGCAACCCATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAERGTC*LQPIGH
Trigger: ATGGCCAATGGGTTGCAAGCAACAAGTTCCCCTCTC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGACACAGTGTTAATGGGTaGCACACCTGGCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRHSVNG*HTWLLG
Trigger: CCCAAGCAGCCAGGTGTGGCACCCATTAACACTGTG...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATATGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRICSTSL*PGNWFR
Trigger: TCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACA...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATCCAGGGCTCTGAGCTaGTCAGGGGCTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPSRALS*SGALSL
Trigger: CAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAATLPGS*SASLFD
Trigger: GTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGT...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAACGCAGCAAGTGCCGCTaGTGGGCAGTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKRSKCR*WAVFLQ
Trigger: CTGCAAAAAGACTGCCCAGCAGCGGCACTTGCTGCG...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAGCTGCCGCAGCAAGTaGCGCTGCTGGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLSCRSK*RCWAVF
Trigger: AAAGACTGCCCAGCAGCGGCACTTGCTGCGGCAGCT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAGTCTGGACAAAGAGCTaGCGCAGCAAGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQVWTKS*RSKCRC
Trigger: GCAGCGGCACTTGCTGCGGCAGCTCTTTGTCCAGAC...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACTTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHLAVLQ*VPAISK
Trigger: TTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAA...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGGAAGCTCTCCCAGGTaGCCAGCAGCCGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNGSSPR*PAAGHG
Trigger: CCCATGCCCGGCTGCTGGGCACCTGGGAGAGCTTCC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGCACTCTGGGTGTTCTaGCAGGGATCTCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVALWVF*QGSLHA
Trigger: TGCATGCAGAGATCCCTGGCAGAACACCCAGAGTGC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTACCAAGTTTCTCAACTaGACACGCCAGATGCGCGTT +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCTKFLN*TRQMRV
Trigger: AACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGT...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCGAGATGGGACCCTCTTaGAGAGTTTGGCTAAAGTTT +
Preference number: 4 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVEMGPS*RVWLKF
Trigger: AAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTC...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLKVSAG*ASMLAS
Trigger: AGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGTGCTGCCTCACTGCTaGCAGCAGATGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCVLPHC*QQMLLG
Trigger: CCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCAC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGTGCTGCCTCACTGCTaGCAGCAGATGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPVLPHC*QQMLLG
Trigger: CCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCAC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCAATTGGGTCATGTCATaGGATCTGAAATCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGNWVMS*DLKSQY
Trigger: ATACTGCGATTTCAGATCCCATGACATGACCCAATT...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGATATGTCCCACAAATTaGGTCATGTCATGGGATCTG +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTICPTN*VMSWDL
Trigger: CAGATCCCATGACATGACCCAATTTGTGGGACATAT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCCCCGGAGTGACATGTaGCATTGTGCAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQPRSDM*HCARKA
Trigger: GGCTTTCCTTGCACAATGCCACATGTCACTCCGGGG...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACATGATTGTCTGGCTTaGCCACGTTCCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAHDCLA*PRSTQS
Trigger: GCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTAACCACATGATTGTCTaGCTTGGCCACGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTANHMIV*LGHVPH
Trigger: GTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTT...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGCCAGCTGGCAAAACTaGCACTGTTCCTATCAGGGG +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVASWQN*HCSYQG
Trigger: CCCCTGATAGGAACAGTGCCAGTTTTGCCAGCTGGC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAACTGGGGGCTGCTGCTaGAGGGAGAGGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPTGGCC*RERNCA
Trigger: AGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGT...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAAGAGCTCGGCTTTGGTaGGGTAGGGGAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVRARLW*GRGTCG
Trigger: TCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCT...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CCCTGTTCCAAGCAAACTGCAAGAACGAGACCAAACAGTATGGGCAGGAACCAGCTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: PCSKQTARTRPNSMGRNQLELFF*ILGHHS
Trigger: ACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAG...CTGGTTCCTGCCCATACTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCGGACATTGCCAGCACTaGCGACGAGTGGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTGHCQH*RRVGYL
Trigger: TAAATACCCCACTCGTCGCCAGTGCTGGCAATGTCC...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACAGGTATCATCGCTCTaGAGCCCTTCAAGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVQVSSL*SPSSSG
Trigger: GCCGGAACTTGAAGGGCTCCAGAGCGATGATACCTG...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCCGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSRLAEG*VASVAV
Trigger: AACAGCCACACTAGCAACCCACCCTTCTGCCAAACG...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACTCGTCGGGTCATTTTaGTTTCACTTCTCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAALVGSF*FHFSGG
Trigger: ACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAACTTGGCCACTGTGTCTaGACAAAGAGCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKLGHCV*TKSCRS
Trigger: GCTGCGGCAGCTCTTTGTCCAGACACAGTGGCCAAG...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGACCAGTACCAGGGCCCTaGTCCTCACTGCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRPVPGP*SSLPVS
Trigger: AGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGG...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGTCAGACACCCGGAGATaGCTTCAGCCTGGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQSDTRR*LQPGPP
Trigger: GGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGA...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAATCTGTCCAGACTGCTaGGCTCCTTACATGGGCATT +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAICPDC*APYMGI
Trigger: AATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGAT...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAGTCTCTGTGCACGACTaGCTGGATTCAGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAVSVHD*LDSGFC
Trigger: GCAAAACCCTGAATCCAGCCAGTCGTGCACAGAGAC...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAGCCCTGGTGTGGCATaGCCCAACCATGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRSPGVA*PNHVPA
Trigger: GGCAGGGACATGGTTGGGCCATGCCACACCAGGGCT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTTTGCCTCACCAGCCCTaGTGTGGCATGGCCCAACCA +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGLPHQP*CGMAQP
Trigger: TGGTTGGGCCATGCCACACCAGGGCTGGTGAGGCAA...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp GCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTaGGGGAAATTGAGGATTTACCATTTAGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: APLYQLLSEQPV*GKLRIYHLEQL
Trigger: GAGCTGTTCTAAATGGTAAATCCTCAATTTCCCCAAGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CAA 72 bp GGTTCCATTTGCACTCAGAGCAAACCAAGCAGCACCTaGATTGCCACTTTTCCTCCAGCCACTCTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: GSICTQSKPSST*IATFPPATLSK
Trigger: TTTTGACAGAGTGGCTGGAGGAAAAGTGGCAATCAAGGTGCTGCTTGGTTTGCTCTGAGTGCAAATGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGTCTTGCTGGCCATGGTaGCAATCACTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQSCWPW*QSLGDQ
Trigger: CTGATCACCCAGTGATTGTCACCATGGCCAGCAAGA...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAAAAAGTCTGTGTGCTCTaGGTTCATATGTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: PCATKFLNCTRQMRVLREKVCVL*VHMSHK
Trigger: TTTGTGGGACATATGAACTCAGAGCACACAGACTTT...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCAAAGTCTGTGTGCTCTaGGTTCATATGTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCKVCVL*VHMSHK
Trigger: TTTGTGGGACATATGAACTCAGAGCACACAGACTTT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTCTGGCTTCCCCGGAGTaGCATGTGGCATTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCLASPE*HVALCK
Trigger: CTTGCACAATGCCACATGTCACTCCGGGGAAGCCAG...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTT +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPAPFQS*QLFMRF
Trigger: AAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGATGATGATGGAACTGTaGTCTCCAGGTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWMMMEL*SPGIIA
Trigger: AGCGATGATACCTGGAGATCACAGTTCCATCATCAT...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPSLRTI*VGRSSV
Trigger: CACTGAAGAACGGCCAACTCAAATGGTACGAAGACT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGATTTCCACCTGAAAGATaGGCTAGTGCCCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRFPPER*ASAHGW
Trigger: CCAGCCATGGGCACTAGCTCATCTTTCAGGTGGAAA...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCCACTAGTACATGTGTaGGCCCGCAAGGCACTACCC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLPLVHV*ARKALP
Trigger: GGGTAGTGCCTTGCGGGCTCACACATGTACTAGTGG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTACACATCTGCAAATGGTaGGTCAAACTGGTGAAATCT +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLHICKW*VKLVKS
Trigger: AGATTTCACCAGTTTGACTCACCATTTGCAGATGTG...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTCCCTCTTCACTTTATaGAGTCCCACAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWSLFTL*SPTSIS
Trigger: AGAGATGCTTGTGGGACTGCATAAAGTGAAGAGGGA...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGATCCCTCTTCACTTTATaGAGTCCCACAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRSLFTL*SPTSIS
Trigger: AGAGATGCTTGTGGGACTGCATAAAGTGAAGAGGGA...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTGCTTTTTCAGTTGTTTaGAGAAAGCAGGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAAFSVV*RKQVFP
Trigger: AGGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGC...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACACTGCTGGCAGCAGATaGTTCTGGGGGCAGATCCTG +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNTAGSR*FWGQIL
Trigger: CAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGT...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTTAGVL*CLTAGS
Trigger: GCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTAATAGCCATCTAAAGTaGTCCGATGCCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLANSHLK*SDAHWP
Trigger: TGGCCAATGGGCATCGGAGCACTTTAGATGGCTATT...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTGCAGAGCTGGCAGATaGCTGGCTGACTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLCRAGR*LADWNC
Trigger: GCAGTTCCAGTCAGCCAGGCATCTGCCAGCTCTGCA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCATTGTACGTTGGAATaGTGCTCAGGGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLHCTLE*CSGGSS
Trigger: TGATGATCCCCCTGAGCAGCATTCCAACGTACAATG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGGGGAACTTGTTGCTTaGAACCCATTGGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAGELVA*NPLAIN
Trigger: ATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAGAGAGGGGAACTTGTTaGTTGCAACCCATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAERGTC*LQPIGH
Trigger: ATGGCCAATGGGTTGCAAGCAACAAGTTCCCCTCTC...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAACACAGTGTTAATGGGTaGCACACCTGGCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKHSVNG*HTWLLG
Trigger: CCCAAGCAGCCAGGTGTGGCACCCATTAACACTGTG...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAAGGAAGAGGGTTTTGTaGAAAACTGCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEERKRVL*KTALQG
Trigger: GCCCTGGAGAGCAGTTTTGCACAAAACCCTCTTCCT...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAALAVLQ*VPAISK
Trigger: TTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGACTCACTGCCTGTGTCTaGCACGGCTCTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRLTACV*HGSGLL
Trigger: GAGGAGACCAGAGCCGTGGCAGACACAGGCAGTGAG...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCCATCCCTTTGTGAACTaGTGTGAGCTCACCAGTACC +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSHPFVN*CELTST
Trigger: GGTACTGGTGAGCTCACAGCAGTTCACAAAGGGATG...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTCCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAACCCCATCTTGCTTGCTaGTTGCTTGGTGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQPHLAC*LLGGGQ
Trigger: CTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGG...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTTCTCTTCAAAGGTACTaGTTCCTTGAGGAACACAAA +
Preference number: 4 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSSLQRY*FLEEHK
Trigger: TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGA...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATACTAAAACACCACCAGTaGTTCTTGCCCAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTILKHHQ*FLPKAL
Trigger: AAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAAAGGGGCCACCGCCATaGTTGTCCTTGGAGCCACAT +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQKGPPP*LSLEPH
Trigger: ATGTGGCTCCAAGGACAAGCATGGCGGTGGCCCCTT...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCAATACAAAAATAGGCTaGAAAACTTGCCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: VQNHSELSCDRATYLAAANTKIG*KTCQVL
Trigger: GAGTACTTGGCAAGTTTTGCAGCCTATTTTTGTATT...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAACCAAGTTTCTCAACTaGACACGCCAGATGCGCGTT +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTTKFLN*TRQMRV
Trigger: AACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGT...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCCCCCAACACCCATGTaGCACCAAGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQPPTPM*HQVSQL
Trigger: CAGTTGAGAAACTTGGTGGCACATGGGTGTTGGGGG...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGACACCTGCGTGATGACTaGCTCCCTCATCATCGCTTT +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRHLRDD*LPHHRF
Trigger: AAAGCGATGATGAGGGAGGCAGTCATCACGCAGGTG...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCCTGGATTCAGGGTTTTaGCCCCAAACCCTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSLDSGF*PQTLEY
Trigger: GTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAG...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGATCCCACATCCCCCACTaGCACTGGGCTAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRSHIPH*HWASVG
Trigger: ACCCACACTAGCCCAGTGGCAGTGGGGGATGTGGGA...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTCTGCAGCCCACAAATaGCTTCTACTGAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLSAAHK*LLLKAT
Trigger: TGTTGCCTTCAGTAGAAGGCATTTGTGGGCTGCAGA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAATGGTAACCAGGGTCTaGCTAGTCTCATCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKMVTRV*LVSSPA
Trigger: GGCTGGGGATGAGACTAGGCAGACCCTGGTTACCAT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAATCATCCTCAAAGTCCTaGGAACCCAAAGATAGAACT +
Preference number: 4 (lower is better)
Translates to: PCATKFLNCTRQMRVLRESSSKS*EPKDRT
Trigger: AGTTCTATCTTTGGGTTCGCAGGACTTTGAGGATGA...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACACTGGGATCATGCATaGTGTGGTGGATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAHWDHA*CGGFPL
Trigger: AAGAGGAAATCCACCACACCATGCATGATCCCAGTG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACGGCAGCAGATGCTTCTaGGGGCAGATCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNGSRCF*GQILLG
Trigger: CCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCC...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCAGCCCCTTCAGCACTaGGCTCACCCGCTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQQPLQH*AHPLGQ
Trigger: CTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGCCTCACCCACAGGCTaGCTAGGGACATTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCASPTG*LGTFSL
Trigger: CAAGGAGAATGTCCCTAGCCAGCCTGTGGGTGAGGC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACCATTGATGAAGGAATaGTCCCCCTCTCTCACCTCC +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVPLMKE*SPSLTS
Trigger: GGAGGTGAGAGAGGGGGACCATTCCTTCATCAATGG...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTAGTGGCTGGTGGACATaGTGTTGGGCATGCACTGGG +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCSGWWT*CWACTG
Trigger: CCCAGTGCATGCCCAACACCATGTCCACCAGCCACT...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CCA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAACCCTGCTTCAGCCTTTaGGCTGTGAACCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQPCFSL*AVNQIL
Trigger: CAAGATCTGGTTCACAGCCCAAAGGCTGAAGCAGGG...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGGACATTGCCAGCACTaGCGACGAGTGGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRGHCQH*RRVGYL
Trigger: TAAATACCCCACTCGTCGCCAGTGCTGGCAATGTCC...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAACCTGGAAGAGCGGCCTaGATGAGATGCTGGACATTG +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKPGRAA*MRCWTL
Trigger: CAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGG...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACCCCTCCTGTACCCTCTaGCTGCCCCACAACGTGACC +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNPSCTL*LPHNVT
Trigger: GGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGG...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAAATGGGTGCCACACCTaGCTGCTTGGGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPNGCHT*LLGDGC
Trigger: ACATCCGTCCCCAAGCAGCCAGGTGTGGCACCCATT...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAATGGGTGCCACACCTaGCTGCTTGGGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLNGCHT*LLGDGC
Trigger: ACATCCGTCCCCAAGCAGCCAGGTGTGGCACCCATT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCACTCTGCCCTGGGAACTaGTTCCGACAGAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPLCPGN*FRQKLP
Trigger: AGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAG...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCATTCAAGTTCCGGCAGTaGTATCTACGATCACTGAAC +
Preference number: 4 (lower is better)
Translates to: RALKTAVVKASGCGYRFPFKFRQ*YLRSLN
Trigger: GTTCAGTGATCGTAGATACCACTGCCGGAACTTGAA...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPVKSGV*CQDCRL
Trigger: CAAACGACAATCTTGGCACCAGACTCCTGACTTCAC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACGCTCTGCCAAGATATaGCTGCTGGGCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVRSAKI*LLGISR
Trigger: TCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCG...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNHHLWP*QTRLGH
Trigger: ATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAATGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAAGATGTGGTCCCTATTaGGACAGGGAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVRCGPY*DREGRR
Trigger: TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCT...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTCTGGAGGTGAGGCACTaGGTGGTTTCTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGLEVRH*VVSQTP
Trigger: GGGTGTCTGAGAAACCACCCAGTGCCTCACCTCCAG...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGCCACTGGGCTAGTGTaGGTGTGTCTCTGTGCACGA +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCATGLV*VCLCAR
Trigger: TCGTGCACAGAGACACACCCACACTAGCCCAGTGGC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAATCCCCCACTGCCACTaGGCTAGTGTGGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQIPHCH*ASVGVS
Trigger: AGACACACCCACACTAGCCCAGTGGCAGTGGGGGAT...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCTTAAAATTTTCTTCTTaGCTGGCTCTCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSYNVPLSTCVMTASLIILKFSS*LALLSC
Trigger: GCAGGAGAGGAGAGCCAGCCAAGAAGAAAATTTTAA...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAATTAAAATTTTCTTCTTaGCTGGCTCTCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKLKFSS*LALLSC
Trigger: GCAGGAGAGGAGAGCCAGCCAAGAAGAAAATTTTAA...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCGGGCTGTGGAAGCTTTaGACCAGCAACAACAAGCTA +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSGLWKL*TSNNKL
Trigger: TAGCTTGTTGTTGCTGGTCCAAAGCTTCCACAGCCC...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACCACCGCCTATCCAAGTaGACAGCAGGGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNHRLSK*TAGKVP
Trigger: AGGCACCTTCCCTGCTGTCCACTTGGATAGGCGGTG...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAATCTTGCTGGCCATGGTaGCAATCACTGGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKSCWPW*QSLGDQ
Trigger: CTGATCACCCAGTGATTGTCACCATGGCCAGCAAGA...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAG +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTEERPG*DAGHCQ
Trigger: CTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATTGGCCATCAATGGCTaGGTGACCAGAAGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPLAING*VTRSPP
Trigger: AGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGGTATCTACGATCACTaGACCATTTCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVGIYDH*TISAPL
Trigger: GAGAGGTGCGGAAATGGTTCAGTGATCGTAGATACC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGATGTATTTGGTTGGTGTaGAGTCAGGAGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRCIWLV*SQESGA
Trigger: GGCACCAGACTCCTGACTTCACACCAACCAAATACA...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTSLRTI*VGRSSV
Trigger: CACTGAAGAACGGCCAACTCAAATGGTACGAAGACT...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCAGCAAACCACTGCTTaGCCTGCTGGGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLQQTTA*PAGSSS
Trigger: AGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAACTTTGTGAACTGCTGTaGGCTCACCAGTACCAGGGC +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQLCELL*AHQYQG
Trigger: GCCCTGGTACTGGTGAGCTCACAGCAGTTCACAAAG...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAAAGGTACTGCTTCCTTaGGGAACACAAAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKKVLLP*GTQRGH
Trigger: GTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVKASLT*NVAGHH
Trigger: GTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTT...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAACCATAGGAGGCTCTaGAATGAGTGTGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRINHRRL*NECGER
Trigger: CCTTTCTCCACACTCATTTCAGAGCCTCCTATGGTT...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATAATCTGGTTTCACCTTTaGGAACTCGATCTACAACCC +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIIWFHL*ELDLQP
Trigger: GGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGAT...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAATTTCTACTCAGGTTTaGTTCTTGGGAAAGACCAAG +
Preference number: 4 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLISTQV*FLGKTK
Trigger: CTTGGTCTTTCCCAAGAATCAAACCTGAGTAGAAAT...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGGTAGGAAGATCATTTaGGGCCAGGAGTTCGGGATT +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVGRKII*GQEFGI
Trigger: AATCCCGAACTCCTGGCCTCAAATGATCTTCCTACC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS-3UTR GCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTCCCTCTTCACTTTATaGAGTCCCACAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLSLFTL*SPTSIS
Trigger: AGAGATGCTTGTGGGACTGCATAAAGTGAAGAGGGA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGCTTTTTCAGTTGTTTaGAGAAAGCAGGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDAFSVV*RKQVFP
Trigger: AGGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGC...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACCGGGCTGGGCCTCCATaGTGGCATCTTGCAACACCA +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNRAGPP*WHLATP
Trigger: TGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCG...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTTCTGGGGGCAGATCCTaGTGGGGTCCTTCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTSGGRS*WGPSGK
Trigger: CTTGCCTGAAGGACCCCAGCAGGATCTGCCCCCAGA...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAATGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKWLLSE*RLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCA...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCAAGTCAGGAGTCTGGTaGCAAGATTGTCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTKSGVW*QDCRLA
Trigger: TGCCAAACGACAATCTTGGCACCAGACTCCTGACTT...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGCTGACTTTGCGCTCTaGCAAGATATGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPADFAL*QDMAAG
Trigger: CCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTLAVLQ*VPAISK
Trigger: TTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAA...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGACTAGCACTGTCACTCTaGCCAGCCCAGGAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRLALSL*PAQEVS
Trigger: AGACACCTCCTGGGCTGGGCAGAGTGACAGTGCTAG...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACAGTCACTCCCCAGTCTTATTGCCCAGAAGTCCGGCCACAGGGAACAAGGCTTAATACAAAAATAGGCTaGAAAACTTGCCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: TVTPQSYCPEVRPQGTRLNTKIG*KTCQVL
Trigger: GAGTACTTGGCAAGTTTTGCAGCCTATTTTTGTATT...AAGCCTTGTTCCCTGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTGACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAACTGCACACGCCAGATaGGCGTTTTACGAGAATCAA +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEETAHAR*AFYENQ
Trigger: TTGATTCTCGTAAAACGCGCATCTGGCGTGTGCAGT...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAGGATCTGTCCAGACTaGTGGGCTCCTTACATGGGC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLRICPD*WAPYMG
Trigger: GCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTGTCCCTTTAAGCACCTaGGTGATGACTGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGVPLST*VMTASL
Trigger: GAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGAC...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTACATACCTGGCTGCTaGCATCCCACATCCCCCACT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLYIPGC*HPTSPT
Trigger: AGTGGGGGATGTGGGATGGCAGCAGCCAGGTATGTA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGATCCTCTCCTGCAAGTTaGCTTTATCCACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRSSPAS*LYPLGV
Trigger: CACCCCAAGTGGATAAAGGCAACTTGCAGGAGAGGA...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTAGGGGAACTGAGCCCTaGTGGCTACCTGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTRGTEP*WLPDLG
Trigger: ACCCAGGTCAGGTAGCCAGCAGGGCTCAGTTCCCCT...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTCTGTTCCAAGCAAACTaGAAGAACGAGACCAAACAG +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTALFQAN*KNETKQ
Trigger: CTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAG...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTTCACCACAATGAGTTaGGTAGCAGGAGAGAAGGAT +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLFTTMS*VAGEKD
Trigger: ATCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000560361.5
CDS-3UTR CCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCACACTGGGATCATGCATaGTGTGGTGGATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAHWDHA*CGGFPL
Trigger: AAGAGGAAATCCACCACACCATGCATGATCCCAGTG...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAACACTGGGATCATGCATaGTGTGGTGGATTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEHWDHA*CGGFPL
Trigger: AAGAGGAAATCCACCACACCATGCATGATCCCAGTG...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCT +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQKVSAG*ASMLAS
Trigger: AGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTT...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCCCCGGAGTGACATGTaGCATTGTGCAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLPRSDM*HCARKA
Trigger: GGCTTTCCTTGCACAATGCCACATGTCACTCCGGGG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGGAGCTGGCAGATGCCTaGCTGACTGGAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMELADA*LTGTAP
Trigger: TGGGGCAGTTCCAGTCAGCCAGGCATCTGCCAGCTC...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGGAGCTGGCAGATGCCTaGCTGACTGGAACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQELADA*LTGTAP
Trigger: TGGGGCAGTTCCAGTCAGCCAGGCATCTGCCAGCTC...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCTTGGCCGTGGGCAGTaGCTGGTGGACATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQLGRGQ*LVDMVL
Trigger: CAACACCATGTCCACCAGCCACTGCCCACGGCCAAG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTTCAAGTTCCGGCAGTaGTATCTACGATCACTGAAC +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPFKFRQ*YLRSLN
Trigger: GTTCAGTGATCGTAGATACCACTGCCGGAACTTGAA...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGG +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTRDLGR*GEGHLW
Trigger: CCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTCTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLALLVFG*CEVRSL
Trigger: CAGACTCCTGACTTCACACCAACCAAATACAAGGAG...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLLLVFG*CEVRSL
Trigger: CAGACTCCTGACTTCACACCAACCAAATACAAGGAG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAATTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAATGTAGCCCTGGCTGTTaGGCAGGGCTAACATCTATA +
Preference number: 4 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQCSPGC*AGLTSI
Trigger: TATAGATGTTAGCCCTGCCCAACAGCCAGGGCTACA...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGTCTCTGTGCACGACTaGCTGGATTCAGGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKVSVHD*LDSGFC
Trigger: GCAAAACCCTGAATCCAGCCAGTCGTGCACAGAGAC...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGCCACTGGGCTAGTGTaGGTGTGTCTCTGTGCACGA +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTATGLV*VCLCAR
Trigger: TCGTGCACAGAGACACACCCACACTAGCCCAGTGGC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGATTGCCTTTATCCACTTaGGGTGTGATATCTGAACTG +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRLPLST*GVISEL
Trigger: CAGTTCAGATATCACACCCCAAGTGGATAAAGGCAA...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGGAACTGAGCCCTGCTaGCTACCTGACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNGTEPC*LPDLGG
Trigger: CCCACCCAGGTCAGGTAGCCAGCAGGGCTCAGTTCC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGCCGCCCCACTTAAATaGCCAGAGAAAACTACATGG +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVAAPLK*PEKTTW
Trigger: CCATGTAGTTTTCTCTGGCCATTTAAGTGGGGCGGC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACTTGCCTCACCAGCCCTaGTGTGGCATGGCCCAACCA +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNLPHQP*CGMAQP
Trigger: TGGTTGGGCCATGCCACACCAGGGCTGGTGAGGCAA...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTTCAGGGCAGTTAGAATaGATGACTCTGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCSGQLE*MTLLDL
Trigger: TAGATCCAGCAGAGTCATCCATTCTAACTGCCCTGA...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp GGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGTCCCTATTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GCKTCQVLTSPC*RQIRCGPYWDR
Trigger: CCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
3UTR CAA 72 bp CTGGCCATGGCAGGAGATGGGACCCTCTTGCAGAGTTaGGCTAAAGTTTCATTGTGCCTCAAAACAAACAAA +
Preference number: 4 (lower is better)
Translates to: LAMAGDGTLLQS*AKVSLCLKTNK
Trigger: TTTGTTTGTTTTGAGGCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCCTGCCATGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGTGACAATCACTGGGTaGTCAGCAGTTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKVTITG*SAVESL
Trigger: CAAGCTCTCAACTGCTGATCACCCAGTGATTGTCAC...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCCTCAGGGGACCAGCTaGTCCCCTGCTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNPQGTS*SPASAF
Trigger: AAAGGCTGAAGCAGGGGATCAGCTGGTCCCCTGAGG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTACCGTAATTGTGGGCTaGGGCACAGACTGGATGACT +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCTVIVG*GTDWMT
Trigger: AGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGT...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCATGATGATGGAACTGTaGTCTCCAGGTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSMMMEL*SPGIIA
Trigger: AGCGATGATACCTGGAGATCACAGTTCCATCATCAT...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGCCATTGGCTTCAGTaGCCCTCAGGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRCHWLQ*PSGSSG
Trigger: ACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCA...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGTTCTCAGACACCTCTaGATAGGTGTCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPVLRHL*IGVTHP
Trigger: GGGATGGGTGACACCTATTCAGAGGTGTCTGAGAAC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTGTGTCAAAGGGCTCTaGGCTGGCCTCAGGGACACG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNCVKGL*AGLRDT
Trigger: CGTGTCCCTGAGGCCAGCTCAGAGCCCTTTGACACA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKKASLT*NVAGHH
Trigger: GTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGACAGCAGGTTCTGCACTaGGTAGCCCACAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRQQVLH*VAHKAK
Trigger: CTTTGCCTTGTGGGCTACTCAGTGCAGAACCTGCTG...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATTTCCACCTGAAAGATaGGCTAGTGCCCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRFPPER*ASAHGW
Trigger: CCAGCCATGGGCACTAGCTCATCTTTCAGGTGGAAA...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAACAATGGAGCTTTTCTaGGATCAAGTGCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRITMELF*DQVLPK
Trigger: TTTGGGGAGCACTTGATCTCAGAAAAGCTCCATTGT...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAGTGCAGACGCTCGGTaGGTTCAGAGACCACTTGGT +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRSADAR*VQRPLG
Trigger: ACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTTGTTTAGCACCAAGATaGTCACCTTTTCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTACLAPR*SPFQPS
Trigger: AGATGGCTGAAAAGGTGATCATCTTGGTGCTAAACA...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTGTTGCTTCTGCAGTTaGATTTCAGTCCTAAGCATA +
Preference number: 4 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLCCFCS*ISVLSI
Trigger: TATGCTTAGGACTGAAATGCAACTGCAGAAGCAACA...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000560361.5
CDS-3UTR GCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNTAGVL*CLTAGS
Trigger: GCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNGQECW*SQGCSA
Trigger: AGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACC...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGGTAATGATGATTTCTaGCTGTCCATCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVGNDDF*LSISPF
Trigger: GAAGGGGCTGATGGACAGGCAGAAATCATCATTACC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAAGAGGAACTGTGCTATaGCAGCTGGCAAAACTGGCA +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKRGTVL*QLAKLA
Trigger: TGCCAGTTTTGCCAGCTGGCATAGCACAGTTCCTCT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACGAGGGAGAGGAACTGTaGTATGCCAGCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNEGEEL*YASWQN
Trigger: GTTTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTC...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTGAGGGAGAGGAACTGTaGTATGCCAGCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLEGEEL*YASWQN
Trigger: GTTTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTC...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTGAGGGAGAGGAACTGTaGTATGCCAGCTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGEGEEL*YASWQN
Trigger: GTTTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTC...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR GCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGGACCAGCTGATCCCCTaGTTCAGCCTTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMDQLIP*FSLWAV
Trigger: CACAGCCCAAAGGCTGAAGCAGGGGATCAGCTGGTC...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGGCGGCCTGGATGAGATaGTGGACATTGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQAAWMR*WTLPAL
Trigger: CAGTGCTGGCAATGTCCAGCATCTCATCCAGGCCGC...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGGGGAACTTGTTGCTTaGAACCCATTGGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVGELVA*NPLAIN
Trigger: ATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTCACAGTGTTAATGGGTaGCACACCTGGCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTHSVNG*HTWLLG
Trigger: CCCAAGCAGCCAGGTGTGGCACCCATTAACACTGTG...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLCSTSL*PGNWFR
Trigger: TCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAACTGCCAAGATATGGCTaGTGGGCATTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQLPRYG*WAFPES
Trigger: GCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAG...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNFCSSL*LGAALP
Trigger: TGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAA...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGCGCAGCAAGTGCCGCTaGTGGGCAGTCTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMRSKCR*WAVFLQ
Trigger: CTGCAAAAAGACTGCCCAGCAGCGGCACTTGCTGCG...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTCCCAGGAGGTGTCTGTaGCCACGAAGCCTGGTACTT +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTPRRCL*PRSLVL
Trigger: AAGTACCAGGCTTCGTGGGCACAGACACCTCCTGGG...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCAATACAAAAATAGGCTaGAAAACTTGCCAAGTACTC +
Preference number: 4 (lower is better)
Translates to: QVDRSLVRPSLPATLRATNTKIG*KTCQVL
Trigger: GAGTACTTGGCAAGTTTTGCAGCCTATTTTTGTATT...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGACCCCCAACACCCATGTaGCACCAAGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRPPTPM*HQVSQL
Trigger: CAGTTGAGAAACTTGGTGGCACATGGGTGTTGGGGG...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAGGATCTGTCCAGACTaGTGGGCTCCTTACATGGGC +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRRICPD*WAPYMG
Trigger: GCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGTGGGCTGCTGGCTTTaGCCTGGAAGACTTGACTAT +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCVGCWL*PGRLDY
Trigger: ATAGTCAAGTCTTCCAGGGCAAAGCCAGCAGCCCAC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAATCTCTGTTGAAGGACTaGGTCCCCATTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQSLLKD*VPIQRG
Trigger: ACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGA...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGATCATGCATGGTGTaGTGGATTTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKGSCMV*WISSCW
Trigger: CCAGCAAGAGGAAATCCACCACACCATGCATGATCC...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCAATTGGGTCATGTCATaGGATCTGAAATCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGNWVMS*DLKSQY
Trigger: ATACTGCGATTTCAGATCCCATGACATGACCCAATT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTATATGTCCCACAAATTaGGTCATGTCATGGGATCTG +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAICPTN*VMSWDL
Trigger: CAGATCCCATGACATGACCCAATTTGTGGGACATAT...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTCTAGGTCAGGAGTGCTaGTGCTCTCAGGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTLGQEC*CSQGCS
Trigger: AGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAG...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGTTCTTCTGGATACTTaGTCACCACAGTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPVLLDT*SPQSNS
Trigger: GCTATTTGACTGTGGTGACCAAGTATCCAGAAGAAC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGGTTCTTCTGGATACTTaGTCACCACAGTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLVLLDT*SPQSNS
Trigger: GCTATTTGACTGTGGTGACCAAGTATCCAGAAGAAC...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCCCTGCTTCAGCCTTTaGGCTGTGAACCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLPCFSL*AVNQIL
Trigger: CAAGATCTGGTTCACAGCCCAAAGGCTGAAGCAGGG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGGACATTGCCAGCACTaGCGACGAGTGGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPGHCQH*RRVGYL
Trigger: TAAATACCCCACTCGTCGCCAGTGCTGGCAATGTCC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAATGGGTGCCACACCTaGCTGCTTGGGGACGGATGT +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNNGCHT*LLGDGC
Trigger: ACATCCGTCCCCAAGCAGCCAGGTGTGGCACCCATT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRGGLLV*LLSECR
Trigger: CCTGCATTCCGACAACAGCCACACTAGCAACCCACC...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLRLAEG*VASVAV
Trigger: AACAGCCACACTAGCAACCCACCCTTCTGCCAAACG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRVKSGV*CQDCRL
Trigger: CAAACGACAATCTTGGCACCAGACTCCTGACTTCAC...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAAGACCCTTAGCTCACTaGCCAAATCCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKRPLAH*PNPLLH
Trigger: GTGGAGAAGAGGATTTGGCCAGTGAGCTAAGGGTCT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACCGCTCTGCCAAGATATaGCTGCTGGGCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNRSAKI*LLGISR
Trigger: TCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCG...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNCWELI*VLSQRF
Trigger: GAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCA...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLCWELI*VLSQRF
Trigger: GAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGCAGAGAGTCGGGTTTaGCTCTTCCACGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNAESRV*LFHVAG
Trigger: GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGGTAGCGGCAGGCTCTaGGCTGTCTGCGAGGATTCT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNGSGRL*AVCEDS
Trigger: AGAATCCTCGCAGACAGCCCAGAGCCTGCCGCTACC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCATAACTGAAAAGTTATaGTCCATGATTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFITEKL*SMIQTP
Trigger: GGGAGTTTGAATCATGGACCATAACTTTTCAGTTAT...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGATAACTGAAAAGTTATaGTCCATGATTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTITEKL*SMIQTP
Trigger: GGGAGTTTGAATCATGGACCATAACTTTTCAGTTAT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGGCTAGTGCCCATGGCTaGGTCACTGTAGGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQASAHG*VTVGPA
Trigger: TGCAGGACCTACAGTGACCCAGCCATGGGCACTAGC...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACCTGTGCACGACTGGCTaGATTCAGGGTTTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNLCTTG*IQGFAP
Trigger: GGGGGCAAAACCCTGAATCCAGCCAGTCGTGCACAG...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATACCAGAGAAAACTACATaGTGGGTAGATGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIPEKTT*WVDEVE
Trigger: TTCAACCTCATCTACCCACCATGTAGTTTTCTCTGG...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAATGTCAAAATCAAAACTaGTTGCCTCACCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQCQNQN*LPHQPW
Trigger: CCAGGGCTGGTGAGGCAACCAGTTTTGATTTTGACA...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGGTGTGACCTGGCACTaGGAACACACAGATTGCAGC +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTGVTWH*EHTDCS
Trigger: GCTGCAATCTGTGTGTTCCCAGTGCCAGGTCACACC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTCAGGTTTGATTCTTaGGAAAGACCAAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLLRFDS*ERPSTC
Trigger: ACAAGTGCTTGGTCTTTCCCAAGAATCAAACCTGAG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGTTCCAGCTTCTCGATaGGGGCCAAAGAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKVPASR*GPKKQF
Trigger: AAACTGTTTCTTTGGCCCTCATCGAGAAGCTGGAAC...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGGCCCGTCACTTTTGTaGGATGTTCAACTTCGCTCT +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCGPSLL*DVQLRS
Trigger: AGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAGGTATCTACGATCACTaGACCATTTCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQGIYDH*TISAPL
Trigger: GAGAGGTGCGGAAATGGTTCAGTGATCGTAGATACC...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGAGGTATCTACGATCACTaGACCATTTCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRGIYDH*TISAPL
Trigger: GAGAGGTGCGGAAATGGTTCAGTGATCGTAGATACC...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTCAGCAAACCACTGCTTaGCCTGCTGGGAGCTCATCT +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTQQTTA*PAGSSS
Trigger: AGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTG...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCTTTGTGAACTGCTGTaGGCTCACCAGTACCAGGGC +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQLCELL*AHQYQG
Trigger: GCCCTGGTACTGGTGAGCTCACAGCAGTTCACAAAG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGTTCTCAGACACCTCTaGATAGGTGTCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTVLRHL*IGVTHP
Trigger: GGGATGGGTGACACCTATTCAGAGGTGTCTGAGAAC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAGTGTCCTTCCTCCATaGAAGGCAGCCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNSVLPP*KAARDR
Trigger: TCTGTCCCTGGCTGCCTTTCATGGAGGAAGGACACT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGAGTGTCCTTCCTCCATaGAAGGCAGCCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMSVLPP*KAARDR
Trigger: TCTGTCCCTGGCTGCCTTTCATGGAGGAAGGACACT...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAAAAGCTGCACCAATCTaGGGATATTGGTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTKAAPI*GYWSKK
Trigger: CTTTTTGGACCAATATCCTCAGATTGGTGCAGCTTT...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACACACATCTGCAAATGGTaGGTCAAACTGGTGAAATCT +
Preference number: 4 (lower is better)
Translates to: CKWVLENQESRPCQEASTHICKW*VKLVKS
Trigger: AGATTTCACCAGTTTGACTCACCATTTGCAGATGTG...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGAACCAGGGATGAGTaGCAAGATCTCCCTAAACAA +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKGTRDE*QDLPKQ
Trigger: TTGTTTAGGGAGATCTTGTCACTCATCCCTGGTTCC...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGTTTGAAGTACCATTaGGGCCCATTTCAAATTGTA +
Preference number: 4 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAGLKYH*GPFQIV
Trigger: TACAATTTGAAATGGGCCTCAATGGTACTTCAAACC...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTATCCCTCTTCACTTTATaGAGTCCCACAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVSLFTL*SPTSIS
Trigger: AGAGATGCTTGTGGGACTGCATAAAGTGAAGAGGGA...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCTTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCC +
Preference number: 4 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGLLKSV*SEFICP
Trigger: GGGACATATGAACTCAGAGCACACAGACTTTAATAA...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCTGGCTGACTGGAACTaGCCCATTGATGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLLADWN*PIDEGM
Trigger: CATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTCTGGCTGACTGGAACTaGCCCATTGATGAAGGAATG +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGLADWN*PIDEGM
Trigger: CATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAG...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR GCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVVRVHG*IVRWNA
Trigger: AGCATTCCAACGTACAATGCAGCCATGGACTCTAAC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTWLLSE*RLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCA...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAAGGAAGAGGGTTTTGTaGAAAACTGCTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPRKRVL*KTALQG
Trigger: GCCCTGGAGAGCAGTTTTGCACAAAACCCTCTTCCT...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLTLPGS*SASLFD
Trigger: GTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAAGTCATAGTCCTGGTTaGTTGGCCACTGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQSHSPG*LATVSG
Trigger: TCCAGACACAGTGGCCAAGCAACCAGGACTATGACT...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAGTCATAGTCCTGGTTaGTTGGCCACTGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLSHSPG*LATVSG
Trigger: TCCAGACACAGTGGCCAAGCAACCAGGACTATGACT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTATGAGAACCCCATCTTaGTTGCTGCTTGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLMRTPS*LLLAWW
Trigger: CCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCAT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTCTCTTCAAAGGTACTaGTTCCTTGAGGAACACAAA +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPSLQRY*FLEEHK
Trigger: TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGA...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTACCAAGTTTCTCAACTaGACACGCCAGATGCGCGTT +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGTKFLN*TRQMRV
Trigger: AACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGT...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCTGGATTCAGGGTTTTaGCCCCAAACCCTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLLDSGF*PQTLEY
Trigger: GTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAATTAACACATACAGGTaGTCATGTGTGTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAINTYR*SCVCVH
Trigger: GTGCACACACACACATGAGCACCTGTATGTGTTAAT...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTAATTGGGTCATGTCATaGGATCTGAAATCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPNWVMS*DLKSQY
Trigger: ATACTGCGATTTCAGATCCCATGACATGACCCAATT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAAACTGCATACAAAGGTTaGGTCTTTATTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKTAYKG*VFIKVC
Trigger: ACAGACTTTAATAAAGACCCAACCTTTGTATGCAGT...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCACTGCATACAAAGGTTaGGTCTTTATTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCTAYKG*VFIKVC
Trigger: ACAGACTTTAATAAAGACCCAACCTTTGTATGCAGT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTCGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATG +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTRSTQS*LPRSDM
Trigger: CATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACG...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCTAGGTCAGGAGTGCTaGTGCTCTCAGGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQLGQEC*CSQGCS
Trigger: AGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTG +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKVKSGV*CQDCRL
Trigger: CAAACGACAATCTTGGCACCAGACTCCTGACTTCAC...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGGCAGCTCACTTTGCCTaGGAGCTGCTCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMAAHFA*ELLCQF
Trigger: AAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGC...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGGCAGCTCACTTTGCCTaGGAGCTGCTCTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQAAHFA*ELLCQF
Trigger: AAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGC...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTGTCTGCGAGGATTCTaGAAGCTCTCCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNCLRGF*KLSQVP
Trigger: GGGCACCTGGGAGAGCTTCCAGAATCCTCGCAGACA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGTGTGCCCACGAAGCCTaGTACTTGTGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQCAHEA*YLWLGT
Trigger: AGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACA...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTTGTGCCCACGAAGCCTaGTACTTGTGGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTCAHEA*YLWLGT
Trigger: AGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACA...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATAGTTCAGAGACCACTTaGTTAGCCCTGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNSSETT*LALPHP
Trigger: GGGGTGGGGCAGGGCTAACCAAGTGGTCTCTGAACT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAGCTGTTTTCTCGGTTTaGTCTCTCACACCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQAVFSV*SLTPGH
Trigger: ATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGC...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
3UTR CAA 72 bp GTACCATTGAGGCCCATTTCAAATTGTACAAGCAATTaGTCCGTGTTCCCCTCCCTTATCCAAATCCACAGA +
Preference number: 4 (lower is better)
Translates to: VPLRPISNCTSN*SVFPSLIQIHR
Trigger: TCTGTGGATTTGGATAAGGGAGGGGAACACGGACAAATTGCTTGTACAATTTGAAATGGGCCTCAATGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGACCGTAATTGTGGGCTaGGGCACAGACTGGATGACT +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQTVIVG*GTDWMT
Trigger: AGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGT...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTCTCTGCCAGTTTGTTTaGCTCATCATCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTLCQFV*LIILRV
Trigger: GACCCTGAGGATGATGAGTCAAACAAACTGGCAGAG...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR TCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGSLRTI*VGRSSV
Trigger: CACTGAAGAACGGCCAACTCAAATGGTACGAAGACT...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR TCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAACTGTAGGTCCTGCATaGACTTGTCCACCAACTGTG +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRTVGPA*TCPPTV
Trigger: CACAGTTGGTGGACAAGTTCATGCAGGACCTACAGT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAGGTTTGAAGTACCATTaGGGCCCATTTCAAATTGTA +
Preference number: 4 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIGLKYH*GPFQIV
Trigger: TACAATTTGAAATGGGCCTCAATGGTACTTCAAACC...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTCTGTGCTGCCTCACTaGTGGCAGCAGATGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNSVLPH*WQQMLL
Trigger: CAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAATAGCCATCTAAAGTaGTCCGATGCCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLNSHLK*SDAHWP
Trigger: TGGCCAATGGGCATCGGAGCACTTTAGATGGCTATT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAAATAGCCATCTAAAGTaGTCCGATGCCCATTGGCCA +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPNSHLK*SDAHWP
Trigger: TGGCCAATGGGCATCGGAGCACTTTAGATGGCTATT...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTGGTAATGATGATTTCTaGCTGTCCATCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLGNDDF*LSISPF
Trigger: GAAGGGGCTGATGGACAGGCAGAAATCATCATTACC...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGACATTGTACGTTGGAATaGTGCTCAGGGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRHCTLE*CSGGSS
Trigger: TGATGATCCCCCTGAGCAGCATTCCAACGTACAATG...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGGCCCTGGTGGGAAGTTaGCTCGCTTATAGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQALVGS*LAYSLR
Trigger: ACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGC...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCTCTTCAAAGGTACTaGTTCCTTGAGGAACACAAA +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSSLQRY*FLEEHK
Trigger: TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGA...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTCTAAAACACCACCAGTaGTTCTTGCCCAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCLKHHQ*FLPKAL
Trigger: AAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTCTAAAACACCACCAGTaGTTCTTGCCCAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGLKHHQ*FLPKAL
Trigger: AAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATCTGCAGCCCACAAATaGCTTCTACTGAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPSAAHK*LLLKAT
Trigger: TGTTGCCTTCAGTAGAAGGCATTTGTGGGCTGCAGA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGGTGGGCTGCTGGCTTTaGCCTGGAAGACTTGACTAT +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMVGCWL*PGRLDY
Trigger: ATAGTCAAGTCTTCCAGGGCAAAGCCAGCAGCCCAC...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAAAATCAAAACTGGTTaGCTCACCAGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLKIKTG*LTSPGV
Trigger: CACACCAGGGCTGGTGAGGCAACCAGTTTTGATTTT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTCTCTGTTGAAGGACTaGGTCCCCATTCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLSLLKD*VPIQRG
Trigger: ACCTCTTTGAATGGGGACGCAGTCCTTCAACAGAGA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATAGCCATCAGTACTGCTaGGGTTCTGTGCTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNSHQYC*GSVLPH
Trigger: GTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACACTGCATACAAAGGTTaGGTCTTTATTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: QGTTQCSVQLPPCATREHTAYKG*VFIKVC
Trigger: ACAGACTTTAATAAAGACCCAACCTTTGTATGCAGT...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CCA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAACTGCATACAAAGGTTaGGTCTTTATTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRTAYKG*VFIKVC
Trigger: ACAGACTTTAATAAAGACCCAACCTTTGTATGCAGT...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGAT +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNGCIVR*NAAQGD
Trigger: ATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCC...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGTTCTTCTGGATACTTaGTCACCACAGTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRVLLDT*SPQSNS
Trigger: GCTATTTGACTGTGGTGACCAAGTATCCAGAAGAAC...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAGACCCTTAGCTCACTaGCCAAATCCTCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRRPLAH*PNPLLH
Trigger: GTGGAGAAGAGGATTTGGCCAGTGAGCTAAGGGTCT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATACAGGCACCCAGCCCTaGAATCTCGTTCCTGCCATT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNTGTQP*NLVPAI
Trigger: AATGGCAGGAACGAGATTCCAGGGCTGGGTGCCTGT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATCGTACCATTTGAGTTaGCCGTTCTTCAGTGCGTAC +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPSYHLS*PFFSAY
Trigger: GTACGCACTGAAGAACGGCCAACTCAAATGGTACGA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTTTGGCTCTTCCACGTaGCAGGCGGTTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNFGSST*QAVSQT
Trigger: AGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCATGGGAACGGCATGTaGCAGCAGAGAGTCGGGTTT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNHGNGM*QQRVGF
Trigger: AAACCCGACTCTCTGCTGCCACATGCCGTTCCCATG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGAAGCCTGGTACTTGTaGCTTGGCACTCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNEAWYL*LGTLGS
Trigger: GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTATCTGTCCAGACTGCTaGGCTCCTTACATGGGCATT +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTICPDC*APYMGI
Trigger: AATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGAT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTTCTCATGTGGGGCTCTaGCCCTGTTCCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTSHVGL*PCSKQT
Trigger: AGTTTGCTTGGAACAGGGCCAGAGCCCCACATGAGA...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR TCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACTGTATTTGGTTGGTGTaGAGTCAGGAGTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNCIWLV*SQESGA
Trigger: GGCACCAGACTCCTGACTTCACACCAACCAAATACA...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAAAGCAAGCCTGACATaGAACGTAGCCGGTCATCAC +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNKASLT*NVAGHH
Trigger: GTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGGTGAGTCAAACTGGTaGAATCTCCCAGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTGESNW*NLPGKL
Trigger: GAGTTTACCTGGGAGATTTCACCAGTTTGACTCACC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATCCCTCTTCACTTTATaGAGTCCCACAAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPSLFTL*SPTSIS
Trigger: AGAGATGCTTGTGGGACTGCATAAAGTGAAGAGGGA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCC +
Preference number: 4 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSLLKSV*SEFICP
Trigger: GGGACATATGAACTCAGAGCACACAGACTTTAATAA...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLVRVHG*IVRWNA
Trigger: AGCATTCCAACGTACAATGCAGCCATGGACTCTAAC...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCTGCCAAGATATGGCTaGTGGGCATTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNLPRYG*WAFPES
Trigger: GCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNFCSSL*LGAALP
Trigger: TGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTTCTTCAGTGCGTACCTaGTATCTCCAAACCAGCGCA +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTSSVRT*YLQTSA
Trigger: TGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGA...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACCATCCCTTTGTGAACTaGTGTGAGCTCACCAGTACC +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNHPFVN*CELTST
Trigger: GGTACTGGTGAGCTCACAGCAGTTCACAAAGGGATG...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAACTGTTCCAAGCAAACTaGAAGAACGAGACCAAACAG +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQLFQAN*KNETKQ
Trigger: CTGTTTGGTCTCGTTCTTGCAGTTTGCTTGGAACAG...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGTCACATGTTGCTTCTaGAGTTGCATTTCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPVTCCF*SCISVL
Trigger: GAGGACTGAAATGCAACTGCAGAAGCAACATGTGAC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACGGATCATGCATGGTGTaGTGGATTTCCTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNGSCMV*WISSCW
Trigger: CCAGCAAGAGGAAATCCACCACACCATGCATGATCC...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCACTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPLELFF*ILGHHS
Trigger: ACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAG...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTCAAGTTCCGGCAGTaGTATCTACGATCACTGAAC +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNFKFRQ*YLRSLN
Trigger: GTTCAGTGATCGTAGATACCACTGCCGGAACTTGAA...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACCTCGTCGGGTCATTTTaGTTTCACTTCTCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNLVGSF*FHFSGG
Trigger: ACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAG...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTATAGTCCTGGTTGCTTaGCCACTGTGTCTGGACAAA +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTIVLVA*PLCLDK
Trigger: TTTGTCCAGACACAGTGGCCAAGCAACCAGGACTAT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGAGACAAATAAGATGTaGTCCCTATTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPETNKM*SLLGQG
Trigger: TCCCTGTCCCAATAGGGACCACATCTTATTTGTCTC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGAAGACTTGACTATGTaGGCCTTCATGTGTCTAGAG +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCEDLTM*AFMCLE
Trigger: CTCTAGACACATGAAGGCCCACATAGTCAAGTCTTC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGGCCGCCCCACTTAAATaGCCAGAGAAAACTACATGG +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMAAPLK*PEKTTW
Trigger: CCATGTAGTTTTCTCTGGCCATTTAAGTGGGGCGGC...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTTTTATCTACAGTGGCTaGATGGTGATAAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: ERSYIVGGRTDENPILLAFIYSG*MVINVH
Trigger: ATGAACATTTATCACCATCCAGCCACTGTAGATAAA...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS-3UTR TCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGGTATCTACGATCACTaGACCATTTCCGCACCTCTC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNGIYDH*TISAPL
Trigger: GAGAGGTGCGGAAATGGTTCAGTGATCGTAGATACC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCTCTGCCAGTTTGTTTaGCTCATCATCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNLCQFV*LIILRV
Trigger: GACCCTGAGGATGATGAGTCAAACAAACTGGCAGAG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTGGAACCAGGGATGAGTaGCAAGATCTCCCTAAACAA +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTGTRDE*QDLPKQ
Trigger: TTGTTTAGGGAGATCTTGTCACTCATCCCTGGTTCC...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTGTCACATGTTGCTTCTaGAGTTGCATTTCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCVTCCF*SCISVL
Trigger: TAGGACTGAAATGCAACTGCAGAAGCAACATGTGAC...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000560364.5
CDS-3UTR GCA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTATTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCC +
Preference number: 4 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVLLKSV*SEFICP
Trigger: GGGACATATGAACTCAGAGCACACAGACTTTAATAA...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGATTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCC +
Preference number: 4 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRLLKSV*SEFICP
Trigger: GGGACATATGAACTCAGAGCACACAGACTTTAATAA...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTCATTGTACGTTGGAATaGTGCTCAGGGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTHCTLE*CSGGSS
Trigger: TGATGATCCCCCTGAGCAGCATTCCAACGTACAATG...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR GCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCATTGTACGTTGGAATaGTGCTCAGGGGGATCATCA +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQHCTLE*CSGGSS
Trigger: TGATGATCCCCCTGAGCAGCATTCCAACGTACAATG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCT +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTVRVHG*IVRWNA
Trigger: AGCATTCCAACGTACAATGCAGCCATGGACTCTAAC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGTTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQLAVLQ*VPAISK
Trigger: TTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAA...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR GCA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATCTGACGAGTCCAACTaGATACAGAGAAAAGGGATA +
Preference number: 4 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRSDESN*IQRKGI
Trigger: TATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGA...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGCCTGTTGGTTCCATTTaGACTCAGAGCAAACCAAGC +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMPVGSI*TQSKPS
Trigger: GCTTGGTTTGCTCTGAGTGCAAATGGAACCAACAGG...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGTTAAGTGATAGAGTATaGTGTTTTCTCGGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQLSDRV*CFLGLV
Trigger: GACCAAACCGAGAAAACAGCATACTCTATCACTTAA...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCACCACAGTCTTCACTaGGATCATGCATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNHHSLH*DHAWCG
Trigger: ACCACACCATGCATGATCCCAGTGAAGACTGTGGTG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCATGATTGTCTGGCTTaGCCACGTTCCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNHDCLA*PRSTQS
Trigger: GCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATAACCACATGATTGTCTaGCTTGGCCACGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNNHMIV*LGHVPH
Trigger: GTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTGTTCTTCTGGATACTTaGTCACCACAGTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGVLLDT*SPQSNS
Trigger: GCTATTTGACTGTGGTGACCAAGTATCCAGAAGAAC...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATCTCGTCGGGTCATTTTaGTTTCACTTCTCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNLVGSF*FHFSGG
Trigger: ACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAG...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAAT +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNGGFPD*PVLHIN
Trigger: ATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAGAGACAAATAAGATGTaGTCCCTATTGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRETNKM*SLLGQG
Trigger: TCCCTGTCCCAATAGGGACCACATCTTATTTGTCTC...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTTGCCTTTATCCACTTaGGGTGTGATATCTGAACTG +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLLPLST*GVISEL
Trigger: CAGTTCAGATATCACACCCCAAGTGGATAAAGGCAA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGTGTCAAAATCAAAACTaGTTGCCTCACCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMCQNQN*LPHQPW
Trigger: CCAGGGCTGGTGAGGCAACCAGTTTTGATTTTGACA...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCTCAGGTTTGATTCTTaGGAAAGACCAAGCACTTGT +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLLRFDS*ERPSTC
Trigger: ACAAGTGCTTGGTCTTTCCCAAGAATCAAACCTGAG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTCAGTCTGTTTCTGCTaGGAGCTCATCTGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNSVCFC*ELIWVL
Trigger: CAAGACCCAGATGAGCTCCCAGCAGAAACAGACTGA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS-3UTR TCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGATGATGATGGAACTGTaGTCTCCAGGTATCATCGCT +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQMMMEL*SPGIIA
Trigger: AGCGATGATACCTGGAGATCACAGTTCCATCATCAT...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR TCA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGATGTTTAGCACCAAGATaGTCACCTTTTCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: DDFTISDESNCIQRKGIRCLAPR*SPFQPS
Trigger: AGATGGCTGAAAAGGTGATCATCTTGGTGCTAAACA...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAGCTTTTTCAGTTGTTTaGAGAAAGCAGGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VTTKENGKASNANHIASPAFSVV*RKQVFP
Trigger: AGGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGC...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR GCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTCTGCAGCCCACAAATaGCTTCTACTGAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNSAAHK*LLLKAT
Trigger: TGTTGCCTTCAGTAGAAGGCATTTGTGGGCTGCAGA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGCTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMLLVFG*CEVRSL
Trigger: CAGACTCCTGACTTCACACCAACCAAATACAAGGAG...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAACATTTGCTCAGACAATaGAGCTTTTCTGAGATCAAG +
Preference number: 4 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQHLLRQ*SFSEIK
Trigger: CTTGATCTCAGAAAAGCTCCATTGTCTGAGCAAATG...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp TGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGATGTGGTCATTTGCTCAGACAATaGAGCTTTTCTGAGATCAAG +
Preference number: 4 (lower is better)
Translates to: CKTCQVLTSPCLRQIRCGHLLRQ*SFSEIK
Trigger: CTTGATCTCAGAAAAGCTCCATTGTCTGAGCAAATG...ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGCAGCAGAAACCTGTTaGTTCCATTTGCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNAAETC*FHLHSE
Trigger: CTCTGAGTGCAAATGGAACCAACAGGTTTCTGCTGC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTGTTGCTTCTGCAGTTaGATTTCAGTCCTAAGCATA +
Preference number: 4 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTCCFCS*ISVLSI
Trigger: TATGCTTAGGACTGAAATGCAACTGCAGAAGCAACA...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000560361.5
CDS-3UTR GCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCC +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNLLKSV*SEFICP
Trigger: GGGACATATGAACTCAGAGCACACAGACTTTAATAA...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR GCA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGTCTGACGAGTCCAACTaGATACAGAGAAAAGGGATA +
Preference number: 4 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQSDESN*IQRKGI
Trigger: TATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGA...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAACTGCATACAAAGGTTaGGTCTTTATTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKTAYKG*VFIKVC
Trigger: ACAGACTTTAATAAAGACCCAACCTTTGTATGCAGT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR TCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATAAAGTCTGTGTGCTCTaGGTTCATATGTCCCACAAA +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNKVCVL*VHMSHK
Trigger: TTTGTGGGACATATGAACTCAGAGCACACAGACTTT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAATTGGGTCATGTCATaGGATCTGAAATCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNNWVMS*DLKSQY
Trigger: ATACTGCGATTTCAGATCCCATGACATGACCCAATT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATATATGTCCCACAAATTaGGTCATGTCATGGGATCTG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNICPTN*VMSWDL
Trigger: CAGATCCCATGACATGACCCAATTTGTGGGACATAT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTATAACTGAAAAGTTATaGTCCATGATTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: REQTQVIFRDDVTDNALLITEKL*SMIQTP
Trigger: GGGAGTTTGAATCATGGACCATAACTTTTCAGTTAT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CCA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACCAAATTTATCTACAGTaGCTGGATGGTGATAAATGT +
Preference number: 4 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNQIYLQ*LDGDKC
Trigger: ACATTTATCACCATCCAGCCACTGTAGATAAATTTG...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS-3UTR TCA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATATTTCTACTCAGGTTTaGTTCTTGGGAAAGACCAAG +
Preference number: 4 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNISTQV*FLGKTK
Trigger: CTTGGTCTTTCCCAAGAATCAAACCTGAGTAGAAAT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR GCA 90 bp CTAGAGGATTTTTCTTCTCCAGCATATAACTACCTTGAGAATGGATGTGATATGTTAAGTGATAGAGTATaGTGTTTTCTCGGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LEDFSSPAYNYLENGCDMLSDRV*CFLGLV
Trigger: GACCAAACCGAGAAAACAGCATACTCTATCACTTAA...CATATCACATCCATTCTCAAGGTAGTTATATGCTGGAGAAGAAAAATCCTCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CCA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACATAACTGAAAAGTTATaGTCCATGATTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNITEKL*SMIQTP
Trigger: GGGAGTTTGAATCATGGACCATAACTTTTCAGTTAT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS GCA 90 bp GCGGCGACGCCGGAGCCGCGGACTGCTGAGCGGCGGGGACGCAGCTaGACCAACCGACTCCGGGCCGCTCGGCTGGGCTCGGCCGCTCTC +
Preference number: 5 (lower is better)
Translates to: AATPEPRTAERRGRS*TNRLRAARLGSAAL
Trigger: GAGAGCGGCCGAGCCCAGCCGAGCGGCCCGGAGTCGGTTGGTGCAGCTGCGTCCCCGCCGCTCAGCAGTCCGCGGCTCCGGCGTCGCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683867.1
CDS GCA 90 bp ACGCAGGCGGCTCTCGGGTGCACACGCGGAACGCACACTCGGGCATaGACTCTCACACGGTCAGGCGGGCCTGCGCGAACGCCCCCGCTT +
Preference number: 5 (lower is better)
Translates to: TQAALGCTRGTHTRA*TLTRSGGPARTPPL
Trigger: AAGCGGGGGCGTTCGCGCAGGCCCGCCTGACCGTGTGAGAGTGCATGCCCGAGTGTGCGTTCCGCGTGTGCACCCGAGAGCCGCCTGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS CCA 90 bp GGCATGGGCTGCCACATCCCAGCAGAGTGCAAGGGCCCTCGGGCGTaGACGCAGGCGGCTCTCGGGTGCACACGCGGAACGCACACTCGG +
Preference number: 5 (lower is better)
Translates to: GMGCHIPAECKGPRA*TQAALGCTRGTHTR
Trigger: CCGAGTGTGCGTTCCGCGTGTGCACCCGAGAGCCGCCTGCGTCCACGCCCGAGGGCCCTTGCACTCTGCTGGGATGTGGCAGCCCATGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS GCA 90 bp GCAGAGTGCAAGGGCCCTCGGGCGTGGACGCAGGCGGCTCTCGGGTaGACACGCGGAACGCACACTCGGGCATGCACTCTCACACGGTCA +
Preference number: 5 (lower is better)
Translates to: AECKGPRAWTQAALG*TRGTHTRACTLTRS
Trigger: TGACCGTGTGAGAGTGCATGCCCGAGTGTGCGTTCCGCGTGTGCACCCGAGAGCCGCCTGCGTCCACGCCCGAGGGCCCTTGCACTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS CCA 90 bp GCTGCCTCACTGCTGGCAGCAGATGCTTCTGGGGGCAGATCCTGCTaGGGTCCTTCAGGCAAGGTCTCAGCGGGCTGGGCCTCCATGCTG +
Preference number: 5 (lower is better)
Translates to: AASLLAADASGGRSC*GPSGKVSAGWASML
Trigger: CAGCATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCGCCACACCTGGCTGCTaGGGGACGGATGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSATPGC*GTDVTV
Trigger: CACGGTGACATCCGTCCCCAAGCAGCCAGGTGTGGC...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PSSRAWERHVAAESRVWLLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS TCA 90 bp CCCGAGTGGTTCGAGTCCTGGCTCTGCCGCCTTCACTGGTCGAGCTaGCGCTCTTTACACCGGGGGCATGGGCTGCCACATCCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PEWFESWLCRLHWSS*RSLHRGHGLPHPSR
Trigger: TCTGCTGGGATGTGGCAGCCCATGCCCCCGGTGTAAAGAGCGTCAGCTCGACCAGTGAAGGCGGCAGAGCCAGGACTCGAACCACTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS GCA 90 bp TGTGCTGCCTCACTGCTGGCAGCAGATGCTTCTGGGGGCAGATCCTaGTGGGGTCCTTCAGGCAAGGTCTCAGCGGGCTGGGCCTCCATG +
Preference number: 5 (lower is better)
Translates to: CAASLLAADASGGRS*WGPSGKVSAGWASM
Trigger: CATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 90 bp GGGATCATCACTTTGGGAAGGGCCTTGGCCGTGGGCAGTGGCTGGTaGACATGGTGTTGGGCATGCACTGGGGGCTGCTGCTGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GIITLGRALAVGSGW*TWCWACTGGCCWRE
Trigger: CTCCCTCCAGCAGCAGCCCCCAGTGCATGCCCAACACCATGTCCACCAGCCACTGCCCACGGCCAAGGCCCTTCCCAAAGTGATGATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGCCACACCTGGCTGCTaGGGGACGGATGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: GMGTACGSRESGLALPRGATPGC*GTDVTV
Trigger: CACGGTGACATCCGTCCCCAAGCAGCCAGGTGTGGC...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GAQQPGMGTACGSRESGLSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS CCA 90 bp GGGGGCAGATCCTGCTGGGGTCCTTCAGGCAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCTTGCAACACCACAGTCTTCACTGGG +
Preference number: 5 (lower is better)
Translates to: GGRSCWGPSGKVSAG*ASMLASCNTTVFTG
Trigger: CCCAGTGAAGACTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAGGACCCCAGCAGGATCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000419740.6
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTCTGGTGGACATGGTGTaGGGCATGCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGLVDMV*GMHWGL
Trigger: CAGCCCCCAGTGCATGCCCAACACCATGTCCACCAG...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTCTGGTGGACATGGTGTaGGGCATGCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRLVDMV*GMHWGL
Trigger: CAGCCCCCAGTGCATGCCCAACACCATGTCCACCAG...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCCTGGTGGACATGGTGTaGGGCATGCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSLVDMV*GMHWGL
Trigger: CAGCCCCCAGTGCATGCCCAACACCATGTCCACCAG...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCGGGGGAGAGGGGAACTaGTTGCTTGCAACCCATTGG +
Preference number: 5 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCGGEGN*LLATHW
Trigger: CCAATGGGTTGCAAGCAACAAGTTCCCCTCTCCCCC...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CAGGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTGGGGGAGAGGGGAACTaGTTGCTTGCAACCCATTGG +
Preference number: 5 (lower is better)
Translates to: QVPSSRAWERHVAAESRVGGEGN*LLATHW
Trigger: CCAATGGGTTGCAAGCAACAAGTTCCCCTCTCCCCC...AACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGCCACACCTGGCTGCTaGGGGACGGATGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPATPGC*GTDVTV
Trigger: CACGGTGACATCCGTCCCCAAGCAGCCAGGTGTGGC...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGTGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: GAQQPGMGTACGSRESGLWQKGG*LVWLLS
Trigger: CGACAACAGCCACACTAGCAACCCACCCTTCTGCCA...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGCAGGAGCTCCCGGTaGCCAGGGGCAATGACCAGT +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSCRSSR*PGAMTS
Trigger: ACTGGTCATTGCCCCTGGCAACCGGGAGCTCCTGCA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCATTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS CCA 90 bp GCTGACGTCCAGCCTGGGGACTCGATGTGTCAAAGGGCTCTGAGCTaGCCTCAGGGACACGGGGCTCCCACGACTCACTGTTCTCAGACA +
Preference number: 5 (lower is better)
Translates to: ADVQPGDSMCQRALS*PQGHGAPTTHCSQT
Trigger: TGTCTGAGAACAGTGAGTCGTGGGAGCCCCGTGTCCCTGAGGCCAGCTCAGAGCCCTTTGACACATCGAGTCCCCAGGCTGGACGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGACTGGAACTGCCCCATaGATGAAGGAATGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWTGTAP*MKEWSP
Trigger: GGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAAGGGGGATCATCACTTaGGGAAGGGCCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPRGIIT*GRALAV
Trigger: CACGGCCAAGGCCCTTCCCAAAGTGATGATCCCCCT...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCAGGGGGATCATCACTTaGGGAAGGGCCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGRGIIT*GRALAV
Trigger: CACGGCCAAGGCCCTTCCCAAAGTGATGATCCCCCT...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTGGCTGCATTGTACGTaGGAATGCTGCTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWWLHCT*ECCSGG
Trigger: TCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PSSRAWERHVAAESRVWLELIWV*SQRFCR
Trigger: CCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTC...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCAGCAAACCACTGCTaGACCTGCTGGGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSANHC*TCWELI
Trigger: GATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTGAGTTCAGAGACCACTaGGTTAGCCCTGCCCCACCC +
Preference number: 5 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGEFRDH*VSPAPP
Trigger: GGGTGGGGCAGGGCTAACCAAGTGGTCTCTGAACTC...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCACTCCCCAGTCTTATaGCCCAGAAGTCCGGCCACA +
Preference number: 5 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSHSPVL*PRSPAT
Trigger: TGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS CCA 90 bp GGCCATCAATGGCTGAGTGACCAGAAGTCCCCCTCCTGTACCCTCTaGCTGCCCCACAACGTGACCTGGAAGAGCGGCCTGGATGAGATG +
Preference number: 5 (lower is better)
Translates to: GHQWLSDQKSPSCTL*LPHNVTWKSGLDEM
Trigger: CATCTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCAGCAGTTGAGAGCTaGTCCCATAAGGGGCCTAAC +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSAVES*SHKGPN
Trigger: GTTAGGCCCCTTATGGGACAAGCTCTCAACTGCTGA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTCGGCATGGGGGTTTTTaGCAGAGCTGGCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSRHGGF*QSWQMP
Trigger: AGGCATCTGCCAGCTCTGCAAAAAACCCCCATGCCG...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATCTGGTGGACATGGTGTaGGGCATGCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GLALPRGRRFPRLASPSHLVDMV*GMHWGL
Trigger: CAGCCCCCAGTGCATGCCCAACACCATGTCCACCAG...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCTGGCTGCATTGTACGTaGGAATGCTGCTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSWLHCT*ECCSGG
Trigger: TCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCA...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSWQKGG*LVWLLS
Trigger: CGACAACAGCCACACTAGCAACCCACCCTTCTGCCA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGAGTCTGGTGCCAAGATaGTCGTTTGGCAGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: GAQQPGMGTACGSRESGLSLVPR*SFGRRV
Trigger: CACCCTTCTGCCAAACGACAATCTTGGCACCAGACT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSRRVI*VSLLRR
Trigger: CCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCSRRVI*VSLLRR
Trigger: CCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GLALPRGRRFPRLASPSHLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...ATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCCTGGTACTTGTGGCTaGGCACTCTGGGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGPGTCG*ALWEAG
Trigger: ACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAGG...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGGGCCACCGCCATGCTaGTCCTTGGAGCCACATGAG +
Preference number: 5 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEGPPPC*SLEPHE
Trigger: CTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCC...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTTGTGTCAAGGTGCTTaGGTCCACCTGAACAGCCAC +
Preference number: 5 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCLCQGA*VHLNSH
Trigger: GTGGCTGTTCAGGTGGACCAAAGCACCTTGACACAA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS TCA 90 bp CAAACCAGCGCACCACCTCTGGCCGTGGCAGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGTTGCTTGGCCACTGTGTCTGGACAA +
Preference number: 5 (lower is better)
Translates to: QTSAPPLAVADPSGP*WSHSPGCLATVSGQ
Trigger: TTGTCCAGACACAGTGGCCAAGCAACCAGGACTATGACTCCATCATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp CCCATTGGCCAGTGTAGAGCCATCAGTACTGCTGGGGTTCTGTGCTaGCTCACTGCTGGCAGCAGATGCTTCTGGGGGCAGATCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PIGQCRAISTAGVLC*LTAGSRCFWGQILL
Trigger: CAGCAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCTCTACACTGGCCAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 90 bp CACTGGGCTCACCCGCTAGGTCAGGAGTGCTGGTGCTCTCAGGGATaGTCTGCTCCACAACCACATGATTGTCTGGCTTGGCCACGTTCC +
Preference number: 5 (lower is better)
Translates to: HWAHPLGQECWCSQG*SAPQPHDCLAWPRS
Trigger: GGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTGAGCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 90 bp CAGCCCCTTCAGCACTGGGCTCACCCGCTAGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCTCCACAACCACATGATTGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: QPLQHWAHPLGQECW*SQGCSAPQPHDCLA
Trigger: AGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 90 bp TGTGAGCTCACCAGTACCAGGGCCCTGGTCCTCACTGCCTGTGTCTaGCACGGCTCTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTG +
Preference number: 5 (lower is better)
Translates to: CELTSTRALVLTACV*HGSGLLPHFLSKPL
Trigger: CAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGGTGAGCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp GCTGGGGTCCTTCAGGCAAGGTCTCAGCGGGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAGTCTTCACTGGGATCATGCATGGTG +
Preference number: 5 (lower is better)
Translates to: AGVLQARSQRAGPPC*HLATPQSSLGSCMV
Trigger: CACCATGCATGATCCCAGTGAAGACTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAGGACCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000419740.6
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 90 bp AGTGGCTGGTGGACATGGTGTTGGGCATGCACTGGGGGCTGCTGCTaGAGGGAGAGGAACTGTGCTATGCCAGCTGGCAAAACTGGCACT +
Preference number: 5 (lower is better)
Translates to: SGWWTWCWACTGGCC*RERNCAMPAGKTGT
Trigger: AGTGCCAGTTTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCATGCCCAACACCATGTCCACCAGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp CAGTGCGTACCTGCTATCTCCAAACCAGCGCACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCATGATGGAGTCATAGTCCTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: QCVPAISKPAHHLWP*QTRLGHDGVIVLVA
Trigger: AGCAACCAGGACTATGACTCCATCATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGGTTTGGAGATAGCAGGTACGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCACTGGAACTGCCCCATaGATGAAGGAATGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: GMGTACGSRESGLALPRGTGTAP*MKEWSP
Trigger: GGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGGCTGCATTGTACGTaGGAATGCTGCTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSWLHCT*ECCSGG
Trigger: TCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCATGGCTGCATTGTACGTaGGAATGCTGCTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPWLHCT*ECCSGG
Trigger: TCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCA...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTATGAGATGCTGGACATaGCCAGCACTGGCGACGAGT +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRMRCWT*PALATS
Trigger: ACTCGTCGCCAGTGCTGGCAATGTCCAGCATCTCAT...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGTTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWLLVWL*SECRLP
Trigger: AGGTAACCTGCATTCCGACAACAGCCACACTAGCAA...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCATGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPWQKGG*LVWLLS
Trigger: CGACAACAGCCACACTAGCAACCCACCCTTCTGCCA...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: PSSRAWERHVAAESRVWLSGALS*YLVGVK
Trigger: CTTCACACCAACCAAATACAAGGAGAGAGCCCCTGA...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCTCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGSRRVI*VSLLRR
Trigger: CCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGA...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCATCTCGTTCCTGCCATaGGCTTCAGTGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: WERHVAAESRVWLFHVAGISFLP*ASVTLR
Trigger: CCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGAT...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTTTTTGCAGCTCACTTaGCCTGGGAGCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRFLQLT*PGSCSA
Trigger: GGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCTTTTTGCAGCTCACTTaGCCTGGGAGCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WERHVAAESRVWLFHVAGFLQLT*PGSCSA
Trigger: GGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAA...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTGCTGGGCAGTCTTTTaGCAGCTCACTTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRCWAVF*QLTLPG
Trigger: CCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCATAGTCCTGGTTGCTaGGCCACTGTGTCTGGACAA +
Preference number: 5 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGHSPGC*ATVSGQ
Trigger: TTGTCCAGACACAGTGGCCAAGCAACCAGGACTATG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPELIWV*SQRFCR
Trigger: CCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTC...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRELIWV*SQRFCR
Trigger: CCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTC...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTCAGCAAACCACTGCTaGACCTGCTGGGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSSANHC*TCWELI
Trigger: GATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: PSSRAWERHVAAESRVWLKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...GAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGCCACCGCCATGCTaGTCCTTGGAGCCACATGAG +
Preference number: 5 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRGPPPC*SLEPHE
Trigger: CTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCC...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCAAGATGTGGTCCCTATaGGGACAGGGAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSKMWSL*GQGGQK
Trigger: CTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTT...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGCTCCTCTCCTGCAAGTaGCCTTTATCCACTTGGGGT +
Preference number: 5 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGLLSCK*PLSTWG
Trigger: ACCCCAAGTGGATAAAGGCAACTTGCAGGAGAGGAG...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGCCAGGAATCAAGACCTaGTCAGGAGGCATCTACAGG +
Preference number: 5 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGPGIKT*SGGIYR
Trigger: CCTGTAGATGCCTCCTGACAAGGTCTTGATTCCTGG...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS TCA 90 bp TACCCTCTGGCTGCCCCACAACGTGACCTGGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAGCACTGGCGACGAGTGGGGTATTTA +
Preference number: 5 (lower is better)
Translates to: YPLAAPQRDLEERPG*DAGHCQHWRRVGYL
Trigger: TAAATACCCCACTCGTCGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCCAGAGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp ATGCCCATTGGCCAGTGTAGAGCCATCAGTACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGCAGATGCTTCTGGGGGCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: MPIGQCRAISTAGVL*CLTAGSRCFWGQIL
Trigger: CAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCTCTACACTGGCCAATGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 90 bp GTCCATCAGCCCCTTCAGCACTGGGCTCACCCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGCTCTGCTCCACAACCACATGATTGT +
Preference number: 5 (lower is better)
Translates to: VHQPLQHWAHPLGQE*WCSQGCSAPQPHDC
Trigger: ACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 90 bp CATCAGCCCCTTCAGCACTGGGCTCACCCGCTAGGTCAGGAGTGCTaGTGCTCTCAGGGATGCTCTGCTCCACAACCACATGATTGTCTG +
Preference number: 5 (lower is better)
Translates to: HQPLQHWAHPLGQEC*CSQGCSAPQPHDCL
Trigger: CAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGGCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 90 bp GTTCTTCAGTGCGTACCTGCTATCTCCAAACCAGCGCACCACCTCTaGCCGTGGCAGACCCGTCTGGGCCATGATGGAGTCATAGTCCTG +
Preference number: 5 (lower is better)
Translates to: VLQCVPAISKPAHHL*PWQTRLGHDGVIVL
Trigger: CAGGACTATGACTCCATCATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCTTCACCACAATGAGTaGGGTAGCAGGAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSLHHNE*GSRREG
Trigger: TCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAAG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTCAGCAGTTGAGAGCTaGTCCCATAAGGGGCCTAAC +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSSAVES*SHKGPN
Trigger: GTTAGGCCCCTTATGGGACAAGCTCTCAACTGCTGA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SRAWERHVAAESRVWLFHESMAA*YVGMLL
Trigger: GAGCAGCATTCCAACGTACAATGCAGCCATGGACTC...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGGCCACACCTGGCTGCTaGGGGACGGATGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRATPGC*GTDVTV
Trigger: CACGGTGACATCCGTCCCCAAGCAGCCAGGTGTGGC...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSCQDCR*AEGWVA
Trigger: AGCAACCCACCCTTCTGCCAAACGACAATCTTGGCA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRCQDCR*AEGWVA
Trigger: AGCAACCCACCCTTCTGCCAAACGACAATCTTGGCA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGTCTGGTGCCAAGATaGTCGTTTGGCAGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: RAWERHVAAESRVWLFHVSLVPR*SFGRRV
Trigger: CACCCTTCTGCCAAACGACAATCTTGGCACCAGACT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWALSLY*VGVKSG
Trigger: TCCTGACTTCACACCAACCAAATACAAGGAGAGAGC...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGATGCTGGGCAGTCTTTTaGCAGCTCACTTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: CGSRESGLALPRGRRFPRCWAVF*QLTLPG
Trigger: CCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCA...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCATAGTCCTGGTTGCTaGGCCACTGTGTCTGGACAA +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGHSPGC*ATVSGQ
Trigger: TTGTCCAGACACAGTGGCCAAGCAACCAGGACTATG...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACATAGTCCTGGTTGCTaGGCCACTGTGTCTGGACAA +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPHSPGC*ATVSGQ
Trigger: TTGTCCAGACACAGTGGCCAAGCAACCAGGACTATG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCTGCAGGAGCTCCCGGTaGCCAGGGGCAATGACCAGT +
Preference number: 5 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGCRSSR*PGAMTS
Trigger: ACTGGTCATTGCCCCTGGCAACCGGGAGCTCCTGCA...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCATCAGCAAACCACTGCTaGACCTGCTGGGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPSANHC*TCWELI
Trigger: GATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGA...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAGCAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GGVCAHEAWYLWLGTLGSRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...GCTTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCTTTGCCCTGGAAGACTaGACTATGTGGGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGFALED*TMWAFM
Trigger: CATGAAGGCCCACATAGTCAAGTCTTCCAGGGCAAA...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGGGCTGTGGAAGCTTaGGACCAGCAACAACAAGCT +
Preference number: 5 (lower is better)
Translates to: RAWERHVAAESRVWLFHVRAVEA*DQQQQA
Trigger: AGCTTGTTGTTGCTGGTCCAAAGCTTCCACAGCCCT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACCAGGAATCAAGACCTaGTCAGGAGGCATCTACAGG +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPPGIKT*SGGIYR
Trigger: CCTGTAGATGCCTCCTGACAAGGTCTTGATTCCTGG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTGCTGTTTTCTCGGTTaGGTCTCTCACACCTGGCCA +
Preference number: 5 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGCCFLG*VSHTWP
Trigger: TGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCA...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS TCA 90 bp TCAGGAGTGCTGGTGCTCTCAGGGATGCTCTGCTCCACAACCACATaGTTGTCTGGCTTGGCCACGTTCCACACAAAGCTGGCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: SGVLVLSGMLCSTTT*LSGLATFHTKLASP
Trigger: CGGGGAAGCCAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 90 bp CCTTCAGGCAAGGTCTCAGCGGGCTGGGCCTCCATGCTGGCATCTTaGAACACCACAGTCTTCACTGGGATCATGCATGGTGTGGTGGAT +
Preference number: 5 (lower is better)
Translates to: PSGKVSAGWASMLAS*NTTVFTGIMHGVVD
Trigger: ATCCACCACACCATGCATGATCCCAGTGAAGACTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000419740.6
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 90 bp GCTGGTGCTCTCAGGGATGCTCTGCTCCACAACCACATGATTGTCTaGCTTGGCCACGTTCCACACAAAGCTGGCTTCCCCGGAGTGACA +
Preference number: 5 (lower is better)
Translates to: AGALRDALLHNHMIV*LGHVPHKAGFPGVT
Trigger: TGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 90 bp AGGAAGGCTTGGGAGGTTATGCTGGGGCAGGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTCACAGCTGACGTTGTATTTGAACAC +
Preference number: 5 (lower is better)
Translates to: RKAWEVMLGQAVRSD*AALTTFTADVVFEH
Trigger: GTGTTCAAATACAACGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCATAACCTCCCAAGCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp GCAGGTTTTCCCTATTCAATACGCCACTCAGGGAATCCGAGGACCTaGGGCCCACGTGTAGTGTTTTCGCGTGGGCAGACAAGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: AGFPYSIRHSGNPRT*GPRVVFSRGQTRVP
Trigger: TGGGACCCTTGTCTGCCCACGCGAAAACACTACACGTGGGCCCCAGGTCCTCGGATTCCCTGAGTGGCGTATTGAATAGGGAAAACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS-3UTR CAA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCTTCACCACAATGAGTaGGGTAGCAGGAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: RAWERHVAAESRVWLFHVLHHNE*GSRREG
Trigger: TCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAAG...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000560361.5
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCATATGTCCCACAAATaGGGTCATGTCATGGGATCT +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWHMSHK*GHVMGS
Trigger: AGATCCCATGACATGACCCAATTTGTGGGACATATG...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTCTCCAGTCGACAGCTTaGGTAAGGCCTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHILQSTA*VRPHPQ
Trigger: CTGTGGGTGAGGCCTTACCAAAGCTGTCGACTGGAG...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTAGGGGAACTTGTTGCTaGCAACCCATTGGCCATCAA +
Preference number: 5 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSRGTCC*QPIGHQ
Trigger: TTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCT...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAAGCATCAAGGAAGGCTaGGGAGGTTATGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: QEVSVPTKPGTCGLALWESIKEG*GGYAGA
Trigger: TGCCCCAGCATAACCTCCCAAGCCTTCCTTGATGCT...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSLLVWL*SECRLP
Trigger: AGGTAACCTGCATTCCGACAACAGCCACACTAGCAA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGLLVWL*SECRLP
Trigger: AGGTAACCTGCATTCCGACAACAGCCACACTAGCAA...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCTGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCWQKGG*LVWLLS
Trigger: CGACAACAGCCACACTAGCAACCCACCCTTCTGCCA...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCATGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPCQDCR*AEGWVA
Trigger: AGCAACCCACCCTTCTGCCAAACGACAATCTTGGCA...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGALSLY*VGVKSG
Trigger: TCCTGACTTCACACCAACCAAATACAAGGAGAGAGC...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGTCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: RAWERHVAAESRVWLFHVSGALS*YLVGVK
Trigger: CTTCACACCAACCAAATACAAGGAGAGAGCCCCTGA...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTTCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRSGALS*YLVGVK
Trigger: CTTCACACCAACCAAATACAAGGAGAGAGCCCCTGA...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGG +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSLMGLT*RSAKIW
Trigger: CCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAA...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGG +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGLMGLT*RSAKIW
Trigger: CCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAA...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGG +
Preference number: 5 (lower is better)
Translates to: SRAWERHVAAESRVWLFHLMGLT*RSAKIW
Trigger: CCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAA...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAATCTCGTTCCTGCCATaGGCTTCAGTGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEISFLP*ASVTLR
Trigger: CCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGAT...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGCTCTGCCAGTTTGTTaGACTCATCATCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSALPVC*THHPQG
Trigger: ACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCAGGCTCTGCTCTGCCAGTTTGTTaGACTCATCATCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ILLAACLVVGRPRVAAGSALPVC*THHPQG
Trigger: ACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGC...AGAGCCTGCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGCTCTGCCAGTTTGTTaGACTCATCATCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GMGTACGSRESGLALPRGALPVC*THHPQG
Trigger: ACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGC...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: QVDRSLVRPSLPATLRATLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCCTGACAATGCACTGCTaGGCTAACCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCLTMHC*ANQSFY
Trigger: GTAGAAACTTTGGTTAGCCAAGCAGTGCATTGTCAG...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GTGCAAAACCACAGTGAGCTGTCCTGTGACAGGGCTACATACCTGGCTGCTGCCCACGAAGCCTGGTACTaGTGGCTTGGCACTCTGGGA +
Preference number: 5 (lower is better)
Translates to: VQNHSELSCDRATYLAAAHEAWY*WLGTLG
Trigger: TCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTG...GGCAGCAGCCAGGTATGTAGCCCTGTCACAGGACAGCTCACTGTGGTTTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGGGGCCACCGCCATGCTaGTCCTTGGAGCCACATGAG +
Preference number: 5 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTGPPPC*SLEPHE
Trigger: CTCATGTGGCTCCAAGGACAAGCATGGCGGTGGCCC...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GCTTGTCCTTGGAGCCACATGAGCACGGTGCCCTGCCAGGTCCAGTTCCCTGGGAGGTCCTGCATGAACTaGTCCACCAACTGTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ACPWSHMSTVPCQVQFPGRSCMN*STNCVL
Trigger: CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCT...CCCAGGGAACTGGACCTGGCAGGGCACCGTGCTCATGTGGCTCCAAGGACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGAGTTCAGAGACCACTaGGTTAGCCCTGCCCCACCC +
Preference number: 5 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGEFRDH*VSPAPP
Trigger: GGGTGGGGCAGGGCTAACCAAGTGGTCTCTGAACTC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCTTGCGGCATCTACAGGCCTTaGGCAACCTCCCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: FLGLVSHTWPWQEMGPSCGIYRP*ATSLTS
Trigger: GGAAGTCAGGGAGGTTGCCAAAGGCCTGTAGATGCC...GCAAGAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS TCA 90 bp CCACGGCTCTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTGCTTaGCCTGCTGGGAGCTCATCTGGGTCTTGTCACAGAGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PRLWSPPPFSQQTTA*PAGSSSGSCHRGSA
Trigger: TGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAGAGCCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 90 bp CAGACACCTCTGAATAGGTGTCACCCATCCCTTTGTGAACTGCTGTaGGCTCACCAGTACCAGGGCCCTGGTCCTCACTGCCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: QTPLNRCHPSLCELL*AHQYQGPGPHCLCL
Trigger: CAGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGGTGAGCTCACAGCAGTTCACAAAGGGATGGGTGACACCTATTCAGAGGTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 90 bp CTCAGGGACACGGGGCTCCCACGACTCACTGTTCTCAGACACCTCTaGATAGGTGTCACCCATCCCTTTGTGAACTGCTGTGAGCTCACC +
Preference number: 5 (lower is better)
Translates to: LRDTGLPRLTVLRHL*IGVTHPFVNCCELT
Trigger: GGTGAGCTCACAGCAGTTCACAAAGGGATGGGTGACACCTATTCAGAGGTGTCTGAGAACAGTGAGTCGTGGGAGCCCCGTGTCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp GTCGTTTGGCAGAAGGGTGGGTTGCTAGTGTGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCTTGGACGATGGGGAGAAGGACACCT +
Preference number: 5 (lower is better)
Translates to: VVWQKGGLLVWLLSE*RLPQGPWTMGRRTP
Trigger: AGGTGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp GCCGCAGCAAGTGCCGCTGCTGGGCAGTCTTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCAGTTTGTTTGACTCATCATCCTCAG +
Preference number: 5 (lower is better)
Translates to: AAASAAAGQSFCSSL*LGAALPVCLTHHPQ
Trigger: CTGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCAGCGGCACTTGCTGCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp GCTCTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTGCTTGACCTaGTGGGAGCTCATCTGGGTCTTGTCACAGAGGTTCTGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: ALVSSPIFSANHCLT*WELIWVLSQRFCRS
Trigger: GGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp TCTGCCACGGCTCTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTaGTTGACCTGCTGGGAGCTCATCTGGGTCTTGTCACAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: SATALVSSPIFSANH*LTCWELIWVLSQRF
Trigger: GAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp TGCTCTCAGGGATGCTCTGCTCCACAACCACATGATTGTCTGGCTTaGCCACGTTCCACACAAAGCTGGCTTCCCCGGAGTGACATGTGG +
Preference number: 5 (lower is better)
Translates to: CSQGCSAPQPHDCLA*PRSTQSWLPRSDMW
Trigger: CCACATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGAGCTTTTTCAGTTGTTaGCAGAAAGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: VPSSRAWERHVAAESRVWSFFSC*QKAGFP
Trigger: GGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGCT...CCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCGTGCTCCGATGCCCATaGGCCAGTGTAGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: EELMRTPSCLLLAWWWAGVLRCP*ASVEPS
Trigger: TGATGGCTCTACACTGGCCAATGGGCATCGGAGCAC...GCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTCTCCAGTCGACAGCTTaGGTAAGGCCTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: LKHHQCFLPKALALSLGSLQSTA*VRPHPQ
Trigger: CTGTGGGTGAGGCCTTACCAAAGCTGTCGACTGGAG...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGAGGGGGATCATCACTTaGGGAAGGGCCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTRGIIT*GRALAV
Trigger: CACGGCCAAGGCCCTTCCCAAAGTGATGATCCCCCT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: DENPILLAACLVVGRPRVESMAA*YVGMLL
Trigger: GAGCAGCATTCCAACGTACAATGCAGCCATGGACTC...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCCTTCACAGCTGACGTaGTATTTGAACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGPSQLT*YLNTQC
Trigger: ACACTGTGTGTTCAAATACAACGTCAGCTGTGAAGG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGAGCATCAAGGAAGGCTaGGGAGGTTATGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: SLKHHQCFLPKALALSLGSIKEG*GGYAGA
Trigger: TGCCCCAGCATAACCTCCCAAGCCTTCCTTGATGCT...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAAAGTCTGGTGCCAAGATaGTCGTTTGGCAGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: QEVSVPTKPGTCGLALWESLVPR*SFGRRV
Trigger: CACCCTTCTGCCAAACGACAATCTTGGCACCAGACT...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: ERHVAAESRVWLFHVAGGALSLY*VGVKSG
Trigger: TCCTGACTTCACACCAACCAAATACAAGGAGAGAGC...ACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTAGCGGCCTCAGGTTCTTCAGGTaGATTTTAATGGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: EPHLACCLLGGGQAEGSGLRFFR*ILMGLT
Trigger: AGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAG...GCCGCTACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAATCTCGTTCCTGCCATaGGCTTCAGTGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRISFLP*ASVTLR
Trigger: CCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGAT...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCA +
Preference number: 5 (lower is better)
Translates to: RAWERHVAAESRVWLFHVSCSAS*FDSSSS
Trigger: TGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCT...CACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCA +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGSCSAS*FDSSSS
Trigger: TGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCT...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCA +
Preference number: 5 (lower is better)
Translates to: GMGTACGSRESGLALPRGSCSAS*FDSSSS
Trigger: TGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACTTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTA +
Preference number: 5 (lower is better)
Translates to: SRAWERHVAAESRVWLFHFVPFE*AVLQCV
Trigger: TACGCACTGAAGAACGGCCAACTCAAATGGTACGAA...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTA +
Preference number: 5 (lower is better)
Translates to: ESGLALPRGRRFPRLASPFVPFE*AVLQCV
Trigger: TACGCACTGAAGAACGGCCAACTCAAATGGTACGAA...AGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TCCCTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SLKHHQCFLPKALALSLGRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...CCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: SRAWERHVAAESRVWLFHRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCAAGGTCCTGCATGAACTaGTCCACCAACTGTGTTTTG +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPRSCMN*STNCVL
Trigger: CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCT...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGTCCTGCATGAACTaGTCCACCAACTGTGTTTTG +
Preference number: 5 (lower is better)
Translates to: GMGTACGSRESGLALPRGRSCMN*STNCVL
Trigger: CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCT...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTTTAAAATTTTCTTCTaGGCTGGCTCTCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCFKIFF*AGSPLL
Trigger: CAGGAGAGGAGAGCCAGCCAAGAAGAAAATTTTAAA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGTCCACAACTGCCCATTaGCTCAGACAATGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWSTTAH*LRQWSF
Trigger: AAAGCTCCATTGTCTGAGCAAATGGGCAGTTGTGGA...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCTGCAGCAGAAACCTGTaGGTTCCATTTGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: WERHVAAESRVWLFHVAGCSRNL*VPFALR
Trigger: TCTGAGTGCAAATGGAACCAACAGGTTTCTGCTGCA...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS TCA 90 bp GTGTCATGTAATAGTCCTGCAGGAGCTCCCGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGAAGTTGCCTCGCTTATAGTCTTCGT +
Preference number: 5 (lower is better)
Translates to: VSCNSPAGAPGCQGQ*PVALVGSCLAYSLR
Trigger: ACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACCGGGAGCTCCTGCAGGACTATTACATGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp TGCCGCTGCTGGGCAGTCTTTTTGCAGCTCACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGACTCATCATCCTCAGGGTCACAGGCA +
Preference number: 5 (lower is better)
Translates to: CRCWAVFLQLTLPGS*SASLFDSSSSGSQA
Trigger: TGCCTGTGACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCAGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp GCCTCGCTTATAGTCTTCGTACCATTTGAGTTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAACCAGCGCACCACCTCTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: ASLIVFVPFELAVLQ*VPAISKPAHHLWPW
Trigger: CCACGGCCAGAGGTGGTGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAACTCAAATGGTACGAAGACTATAAGCGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp CCACAACCACATGATTGTCTGGCTTGGCCACGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATGTGGCATTGTGCAAGGAAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: PQPHDCLAWPRSTQS*LPRSDMWHCARKAP
Trigger: AGGGGCTTTCCTTGCACAATGCCACATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 90 bp CTGGCAGATGCCTGGCTGACTGGAACTGCCCCATTGATGAAGGAATaGTCCCCCTCTCTCACCTCCATTTCTCCAGTCGACAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LADAWLTGTAPLMKE*SPSLTSISPVDSFG
Trigger: ACCAAAGCTGTCGACTGGAGAAATGGAGGTGAGAGAGGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAGGCATCTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp CTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTGCTTGACCTGCTaGGAGCTCATCTGGGTCTTGTCACAGAGGTTCTGCAGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LVSSPIFSANHCLTC*ELIWVLSQRFCRSS
Trigger: AGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: AAGHGNGMWQQRVGFGSSLKGHM*LLQLHF
Trigger: GAAATGCAACTGCAGAAGCAACATGTGACCTTTTAG...GGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTTCAGCAGTTGAGAGCTaGTCCCATAAGGGGCCTAAC +
Preference number: 5 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHISAVES*SHKGPN
Trigger: GTTAGGCCCCTTATGGGACAAGCTCTCAACTGCTGA...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCGTGCTCCGATGCCCATaGGCCAGTGTAGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFVLRCP*ASVEPS
Trigger: TGATGGCTCTACACTGGCCAATGGGCATCGGAGCAC...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCGTGCTCCGATGCCCATaGGCCAGTGTAGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIVLRCP*ASVEPS
Trigger: TGATGGCTCTACACTGGCCAATGGGCATCGGAGCAC...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCATATGTCCCACAAATaGGGTCATGTCATGGGATCT +
Preference number: 5 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWHMSHK*GHVMGS
Trigger: AGATCCCATGACATGACCCAATTTGTGGGACATATG...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGCGGCATGGGGGTTTTTaGCAGAGCTGGCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVRHGGF*QSWQMP
Trigger: AGGCATCTGCCAGCTCTGCAAAAAACCCCCATGCCG...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCGACTGGATGACTGTATaGAACATCTTTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSDWMTV*NIFFRA
Trigger: TGCCCGGAAAAAGATGTTCAATACAGTCATCCAGTC...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCGACTGGATGACTGTATaGAACATCTTTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: GMGTACGSRESGLALPRGDWMTV*NIFFRA
Trigger: TGCCCGGAAAAAGATGTTCAATACAGTCATCCAGTC...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGACTGGATGACTGTATaGAACATCTTTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: WERHVAAESRVWLFHVAGDWMTV*NIFFRA
Trigger: TGCCCGGAAAAAGATGTTCAATACAGTCATCCAGTC...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACCTTCACAGCTGACGTaGTATTTGAACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPPSQLT*YLNTQC
Trigger: ACACTGTGTGTTCAAATACAACGTCAGCTGTGAAGG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCGTTACCTCAGGGACCTaGGACGATGGGGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIVTSGT*DDGEKD
Trigger: GTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAAC...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCCTCAGGTTCTTCAGGTaGATTTTAATGGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: WERHVAAESRVWLFHVAGLRFFR*ILMGLT
Trigger: AGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAG...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGATTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTA +
Preference number: 5 (lower is better)
Translates to: CGSRESGLALPRGRRFPRFVPFE*AVLQCV
Trigger: TACGCACTGAAGAACGGCCAACTCAAATGGTACGAA...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCATTGCTTGCTGCTTGCTaGGTGGTGGGCAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RALKTAVVKASGCGYRFPLLAAC*VVGRPR
Trigger: CCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAA...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LKHHQCFLPKALALSLGSRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACAATAGGCTGCAAAACTaGCCAAGTACTCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: SRAWERHVAAESRVWLFHNRLQN*PSTHKS
Trigger: GGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATT...GTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GGTGCCCAGCAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGACTGTGTTTTGCTGTTaGGGTTGTAAATTAACCGTG +
Preference number: 5 (lower is better)
Translates to: GAQQPGMGTACGSRESGLTVFCC*GCKLTV
Trigger: CACGGTTAATTTACAACCCAAACAGCAAAACACAGT...CAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTGCTGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp TGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCCATCTGGTTTCACCTTaGAGAACTCGATCTACAACC +
Preference number: 5 (lower is better)
Translates to: WERHVAAESRVWLFHVAGHLVSP*RTRSTT
Trigger: GGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATG...GCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCATAGAAACTTCTCTGTaGAAGGACTGCGTCCCCATT +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGIETSL*KDCVPI
Trigger: AATGGGGACGCAGTCCTTCAACAGAGAAGTTTCTAT...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTGGCATCTACAGGCCTTaGGCAACCTCCCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAGIYRP*ATSLTS
Trigger: GGAAGTCAGGGAGGTTGCCAAAGGCCTGTAGATGCC...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGACCCTCTTGCAGAGTTaGGCTAAAGTTTCATTGTGC +
Preference number: 5 (lower is better)
Translates to: GHGNGMWQQRVGFGSSTWTLLQS*AKVSLC
Trigger: GCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGT...CCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTTGCTGTTTTCTCGGTTaGGTCTCTCACACCTGGCCA +
Preference number: 5 (lower is better)
Translates to: VWLFHVAGGFPDWPVLHICCFLG*VSHTWP
Trigger: TGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCA...AATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCAATTGTACAAGCAATTaGTCCGTGTTCCCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: RVGFGSSTWQAVSQTGQSNCTSN*SVFPSL
Trigger: AAGGGAGGGGAACACGGACAAATTGCTTGTACAATT...GGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCCTGGGGATAAAGTTCTaGCCCTCAATGAGGATTTCA +
Preference number: 5 (lower is better)
Translates to: GMGTACGSRESGLALPRGLGIKF*PSMRIS
Trigger: TGAAATCCTCATTGAGGGCAAGAACTTTATCCCCAG...GCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS TCA 90 bp GGGGAGAAGGACACCTCTGGCACAGAGTCAATGATGATGGAACTGTaGTCTCCAGGTATCATCGCTCTGGAGCCCTTCAAGTTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: GEKDTSGTESMMMEL*SPGIIALEPFKFRQ
Trigger: CTGCCGGAACTTGAAGGGCTCCAGAGCGATGATACCTGGAGATCACAGTTCCATCATCATTGACTCTGTGCCAGAGGTGTCCTTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 90 bp CTGGTACTGAGGCCCGTCACTTTTGTGAGATGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGACAGAAGCTCCCTTTCAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LVLRPVTFVRCSTSL*PGNWFRQKLPFRAD
Trigger: GTCAGCTCTGAAAGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCCTCAGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp TCTGGTGCCAAGATTGTCGTTTGGCAGAAGGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGGTTACCTCAGGGACCTTGGACGATG +
Preference number: 5 (lower is better)
Translates to: SGAKIVVWQKGGLLV*LLSECRLPQGPWTM
Trigger: CATCGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp GTGAAGTCAGGAGTCTGGTGCCAAGATTGTCGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTTGTCGGAATGCAGGTTACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VKSGVWCQDCRLAEG*VASVAVVGMQVTSG
Trigger: CCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGACTCCTGACTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp CTCCAGGGCTCTGAGCTGCTCAGGGGCTCTCTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTGGTGCCAAGATTGTCGTTTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LQGSELLRGSLLVFG*CEVRSLVPRLSFGR
Trigger: TCTGCCAAACGACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRLKGHM*LLQLHF
Trigger: GAAATGCAACTGCAGAAGCAACATGTGACCTTTTAG...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGGGTGGTTTCTCAGACACCCGGAGATGGCTTCAGCCTGGGCCGCCCCAGCTGCTCAATCTTTGTAGCTTaGGGCAAAATTCTTAAGCTG +
Preference number: 5 (lower is better)
Translates to: WVVSQTPGDGFSLGRPSCSIFVA*GKILKL
Trigger: CAGCTTAAGAATTTTGCCCAAAGCTACAAAGATTGA...GCAGCTGGGGCGGCCCAGGCTGAAGCCATCTCCGGGTGTCTGAGAAACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCAGCTTTTTCAGTTGTTaGCAGAAAGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGSFFSC*QKAGFP
Trigger: GGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGCT...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCACATATGTCCCACAAATaGGGTCATGTCATGGGATCT +
Preference number: 5 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPHMSHK*GHVMGS
Trigger: AGATCCCATGACATGACCCAATTTGTGGGACATATG...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGACTGGAACTGCCCCATaGATGAAGGAATGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVTGTAP*MKEWSP
Trigger: GGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGT...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCCGGCATGGGGGTTTTTaGCAGAGCTGGCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: TSYNVPLSTCVMTASLIIRHGGF*QSWQMP
Trigger: AGGCATCTGCCAGCTCTGCAAAAAACCCCCATGCCG...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CAA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTAGGGGGATCATCACTTaGGGAAGGGCCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: RSYIVGGRTDENPILLAARGIIT*GRALAV
Trigger: CACGGCCAAGGCCCTTCCCAAAGTGATGATCCCCCT...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGGTTACCTCAGGGACCTaGGACGATGGGGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLVTSGT*DDGEKD
Trigger: GTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAAC...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGATTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRLLVWL*SECRLP
Trigger: AGGTAACCTGCATTCCGACAACAGCCACACTAGCAA...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTCAGGTTCTTCAGGTaGATTTTAATGGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: CGSRESGLALPRGRRFPRLRFFR*ILMGLT
Trigger: AGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAG...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGCTCTGCCAGTTTGTTaGACTCATCATCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRALPVC*THHPQG
Trigger: ACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGC...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATGCAGGAGCTCCCGGTaGCCAGGGGCAATGACCAGT +
Preference number: 5 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAACRSSR*PGAMTS
Trigger: ACTGGTCATTGCCCCTGGCAACCGGGAGCTCCTGCA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGCTAAAGTAGAGTTCTaGTTTCCAAGTTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRAKVEF*FPSLGT
Trigger: TGTCCCCAAACTTGGAAACAAGAACTCTACTTTAGC...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CAACACCCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACACGAAGCCTGGTACTaGTGGCTTGGCACTCTGGGA +
Preference number: 5 (lower is better)
Translates to: QHPCATKFLNCTRQMRVLHEAWY*WLGTLG
Trigger: TCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTG...TAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGGGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTAAGATGTGGTCCCTATaGGGACAGGGAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSKMWSL*GQGGQK
Trigger: CTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCAAGATGTGGTCCCTATaGGGACAGGGAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QVDRSLVRPSLPATLRATKMWSL*GQGGQK
Trigger: CTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTT...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGATCAAAGAGGTCAGATTaGTGGGCAGGCAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRSKRSD*WAGKSS
Trigger: TGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGA...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAACACTCCCCAGTCTTATaGCCCAGAAGTCCGGCCACA +
Preference number: 5 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKHSPVL*PRSPAT
Trigger: TGTGGCCGGACTTCTGGGCAATAAGACTGGGGAGTG...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAAATTGTACAAGCAATTaGTCCGTGTTCCCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: HVAAESRVWLFHVAGGFPNCTSN*SVFPSL
Trigger: AAGGGAGGGGAACACGGACAAATTGCTTGTACAATT...TGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS CCA 90 bp GGAGTTCTTCAGGAAGCTGTTAGAGTCCATGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGATCATCACTTTGGGAAGGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: GVLQEAVRVHGCIVR*NAAQGDHHFGKGLG
Trigger: GCCAAGGCCCTTCCCAAAGTGATGATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCATGGACTCTAACAGCTTCCTGAAGAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp TGTGGCTGTTGTCGGAATGCAGGTTACCTCAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGGCACAGAGTCAATGATGATGGAACT +
Preference number: 5 (lower is better)
Translates to: CGCCRNAGYLRDLGR*GEGHLWHRVNDDGT
Trigger: AGTTCCATCATCATTGACTCTGTGCCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp GAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAATCAGATCAAATTCAGTCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ESRVWLFHVAGGFPD*PVLHINQIKFSLLG
Trigger: TCCCAGCAGACTGAATTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559436.2
CDS-3UTR CAA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAGTGCTCCGATGCCCATaGGCCAGTGTAGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRVLRCP*ASVEPS
Trigger: TGATGGCTCTACACTGGCCAATGGGCATCGGAGCAC...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTCTCCAGTCGACAGCTTaGGTAAGGCCTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: RSYIVGGRTDENPILLAALQSTA*VRPHPQ
Trigger: CTGTGGGTGAGGCCTTACCAAAGCTGTCGACTGGAG...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGGGGGAGAGGGGAACTaGTTGCTTGCAACCCATTGG +
Preference number: 5 (lower is better)
Translates to: RSYIVGGRTDENPILLAAGGEGN*LLATHW
Trigger: CCAATGGGTTGCAAGCAACAAGTTCCCCTCTCCCCC...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAGTTACCTCAGGGACCTaGGACGATGGGGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRVTSGT*DDGEKD
Trigger: GTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAAC...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTGTTACCTCAGGGACCTaGGACGATGGGGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RSYIVGGRTDENPILLAAVTSGT*DDGEKD
Trigger: GTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAAC...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCTGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFCQDCR*AEGWVA
Trigger: AGCAACCCACCCTTCTGCCAAACGACAATCTTGGCA...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTCQDCR*AEGWVA
Trigger: AGCAACCCACCCTTCTGCCAAACGACAATCTTGGCA...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGAGTCTGGTGCCAAGATaGTCGTTTGGCAGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVSLVPR*SFGRRV
Trigger: CACCCTTCTGCCAAACGACAATCTTGGCACCAGACT...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGATCTCGTTCCTGCCATaGGCTTCAGTGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLISFLP*ASVTLR
Trigger: CCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGAT...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAATTTTTGCAGCTCACTTaGCCTGGGAGCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKFLQLT*PGSCSA
Trigger: GGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAA...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGCATAGTCCTGGTTGCTaGGCCACTGTGTCTGGACAA +
Preference number: 5 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTHSPGC*ATVSGQ
Trigger: TTGTCCAGACACAGTGGCCAAGCAACCAGGACTATG...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGCATAGTCCTGGTTGCTaGGCCACTGTGTCTGGACAA +
Preference number: 5 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRHSPGC*ATVSGQ
Trigger: TTGTCCAGACACAGTGGCCAAGCAACCAGGACTATG...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLELIWV*SQRFCR
Trigger: CCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTC...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AACCAAGTGCAGACGCTCGGTGAGTTCAGAGACCACTTGGTTAGCCCTGCCCCATCAGAGCAACCGGTCTaGGGGAAATTGAGGATTTAC +
Preference number: 5 (lower is better)
Translates to: NQVQTLGEFRDHLVSPAPSEQPV*GKLRIY
Trigger: GTAAATCCTCAATTTCCCCAAGACCGGTTGCTCTGA...TGGGGCAGGGCTAACCAAGTGGTCTCTGAACTCACCGAGCGTCTGCACTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCACACGAAGCCTGGTACTaGTGGCTTGGCACTCTGGGA +
Preference number: 5 (lower is better)
Translates to: RALKTAVVKASGCGYRFPHEAWY*WLGTLG
Trigger: TCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTG...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATAAGATGTGGTCCCTATaGGGACAGGGAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDKMWSL*GQGGQK
Trigger: CTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTT...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGCTTGGGGAAGGGACTaGAGCACAGGAGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCAWGRD*STGERL
Trigger: AAGCCTTTCTCCTGTGCTCAAGTCCCTTCCCCAAGC...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCACCTGTTGGTTCCATTaGCACTCAGAGCAAACCAAG +
Preference number: 5 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLTCWFH*HSEQTK
Trigger: CTTGGTTTGCTCTGAGTGCAAATGGAACCAACAGGT...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTCCGAGAACAACCGGATaGCTGTGCTGGGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPPRTTG*LCWVPA
Trigger: AGCAGGGACCCAGCACAGCAATCCGGTTGTTCTCGG...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS TCA 90 bp GTAGCCCTGGTGGGAAGTTGCCTCGCTTATAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTGCGTACCTGCTATCTCCAAACCAGC +
Preference number: 5 (lower is better)
Translates to: VALVGSCLAYSLRTI*VGRSSVRTCYLQTS
Trigger: GCTGGTTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAACTCAAATGGTACGAAGACTATAAGCGAGGCAACTTCCCACCAGGGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp TCAGGGGCTCTCTCCTTGTATTTGGTTGGTGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTGGCAGAAGGGTGGGTTGCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: SGALSLYLVGVKSGV*CQDCRLAEGWVASV
Trigger: CACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp CCCATTTTCTCAGCAAACCACTGCTTGACCTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTCTGCAGGTCCTCTTCATACAGCATC +
Preference number: 5 (lower is better)
Translates to: PIFSANHCLTCWELI*VLSQRFCRSSSYSI
Trigger: GATGCTGTATGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGAGGGTACTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: DENPILLAACLVVGRPRVLKGHM*LLQLHF
Trigger: GAAATGCAACTGCAGAAGCAACATGTGACCTTTTAG...TACCCTCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTGGCTTTTTGGCTTCAGCTTaGCCTTTCATTATCTTCATG +
Preference number: 5 (lower is better)
Translates to: QQRVGFGSSTWQAVSQTGFLASA*PFIIFM
Trigger: CATGAAGATAATGAAAGGCAAAGCTGAAGCCAAAAA...GCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCGGCATGGGGGTTTTTaGCAGAGCTGGCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLRHGGF*QSWQMP
Trigger: AGGCATCTGCCAGCTCTGCAAAAAACCCCCATGCCG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCAATGAGATGCTGGACATaGCCAGCACTGGCGACGAGT +
Preference number: 5 (lower is better)
Translates to: RALKTAVVKASGCGYRFPMRCWT*PALATS
Trigger: ACTCGTCGCCAGTGCTGGCAATGTCCAGCATCTCAT...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTAGGGGAACTTGTTGCTaGCAACCCATTGGCCATCAA +
Preference number: 5 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSRGTCC*QPIGHQ
Trigger: TTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGAGGGGAACTTGTTGCTaGCAACCCATTGGCCATCAA +
Preference number: 5 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWRGTCC*QPIGHQ
Trigger: TTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCT...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATAGGGGGAGAGGGGAACTaGTTGCTTGCAACCCATTGG +
Preference number: 5 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIGGEGN*LLATHW
Trigger: CCAATGGGTTGCAAGCAACAAGTTCCCCTCTCCCCC...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTAGCATCAAGGAAGGCTaGGGAGGTTATGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: RSYIVGGRTDENPILLAASIKEG*GGYAGA
Trigger: TGCCCCAGCATAACCTCCCAAGCCTTCCTTGATGCT...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGCCATCTCTCCTGACAGCAGACTGCTCAACAGTCACTCCCCAGTCTTATTGCTCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: QPSLLTADCSTVTPQSYCSGALS*YLVGVK
Trigger: CTTCACACCAACCAAATACAAGGAGAGAGCCCCTGA...GCAATAAGACTGGGGAGTGACTGTTGAGCAGTCTGCTGTCAGGAGAGATGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATTCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDSRRVI*VSLLRR
Trigger: CCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGA...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTGCTCTGCCAGTTTGTTaGACTCATCATCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAALPVC*THHPQG
Trigger: ACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGC...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTTTTTGCAGCTCACTTaGCCTGGGAGCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLFLQLT*PGSCSA
Trigger: GGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAA...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CTAAAACACCACCAGTGCTTCTTGCCCAAAGCCCTTGCCCTCTCTCTGGGGTCTAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: LKHHQCFLPKALALSLGSRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...AGACCCCAGAGAGAGGGCAAGGGCTTTGGGCAAGAAGCACTGGTGGTGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCCTGGTACTTGTGGCTaGGCACTCTGGGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLPGTCG*ALWEAG
Trigger: ACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAGG...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGGGCTCTGAAAACCGCAGTGGTCAAAGCTTCAGGCTGTGGCTATAGATTTCCAAGGTTGAAGCCTTGCTaGGGGAAGGGACTTGAGCAC +
Preference number: 5 (lower is better)
Translates to: RALKTAVVKASGCGYRFPRLKPC*GKGLEH
Trigger: GTGCTCAAGTCCCTTCCCCAAGCAAGGCTTCAACCT...TGGAAATCTATAGCCACAGCCTGAAGCTTTGACCACTGCGGTTTTCAGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CCCAAGGCCCTGGCAAGCCATCCAACTAGGGCGTTCTTTTTCAGGAACCCAAGATGCAGCAGAAACCTGTaGGTTCCATTTGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: PKALASHPTRAFFFRNPRCSRNL*VPFALR
Trigger: TCTGAGTGCAAATGGAACCAACAGGTTTCTGCTGCA...TCTTGGGTTCCTGAAAAAGAACGCCCTAGTTGGATGGCTTGCCAGGGCCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGAGGGCTGTGGAAGCTTaGGACCAGCAACAACAAGCT +
Preference number: 5 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLRAVEA*DQQQQA
Trigger: AGCTTGTTGTTGCTGGTCCAAAGCTTCCACAGCCCT...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CAGCCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACAAGTCACGTTAATTTaGAATCATCCACTTACGGAA +
Preference number: 5 (lower is better)
Translates to: QPGMGTACGSRESGLALPQVTLI*NHPLTE
Trigger: TTCCGTAAGTGGATGATTCAAAATTAACGTGACTTG...TGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CCGGGCATGGGAACGGCATGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTAACATGAAGATGGATTaGATTTTTGGCAATAGTCCC +
Preference number: 5 (lower is better)
Translates to: PGMGTACGSRESGLALPRNMKMD*IFGNSP
Trigger: GGGACTATTGCCAAAAATCAAATCCATCTTCATGTT...ACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACATGCCGTTCCCATGCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS TCA 90 bp CCAGCACTGGCGACGAGTGGGGTATTTAGAACCGTAATTGTGGGCTaGGGCACAGACTGGATGACTGTATTGAACATCTTTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: PALATSGVFRTVIVG*GTDWMTVLNIFFRA
Trigger: TGCCCGGAAAAAGATGTTCAATACAGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGTTCTAAATACCCCACTCGTCGCCAGTGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp CTTCTGGATACTTGGTCACCACAGTCAAATAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGTGGAAGGAGTTCTTCAGGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: LLDTWSPQSNSRARL*WGRGTCGRSSSGSC
Trigger: ACAGCTTCCTGAAGAACTCCTTCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCTATTTGACTGTGGTGACCAAGTATCCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp GAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAATCAGATCAAATTCAGTCTGTTTCGA +
Preference number: 5 (lower is better)
Translates to: ESRVWLFHVAGGFPD*PVLHINQIKFSLFR
Trigger: TCGAAACAGACTGAATTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp GAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGACTaGCCAGTCCTTCACATTAATCAGATCAAATTCAGTCTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ESRVWLFHVAGGFPD*PVLHINQIKFSLFL
Trigger: GAGAAACAGACTGAATTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558993.1
ENST00000560364.5
CDS-3UTR CAA 90 bp CCATGTGCCACCAAGTTTCTCAACTGCACACGCCAGATGCGCGTTTTACGAGAACTTCACCACAATGAGTaGGGTAGCAGGAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: PCATKFLNCTRQMRVLRELHHNE*GSRREG
Trigger: TCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAAG...TTCTCGTAAAACGCGCATCTGGCGTGTGCAGTTGAGAAACTTGGTGGCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000560364.5
CDS-3UTR CAA 90 bp TGTGGCAGCAGAGAGTCGGGTTTGGCTCTTCCACGTGGCAGGCGGTTTCCCAGATTTTTGGCTTCAGCTTaGCCTTTCATTATCTTCATG +
Preference number: 5 (lower is better)
Translates to: CGSRESGLALPRGRRFPRFLASA*PFIIFM
Trigger: CATGAAGATAATGAAAGGCAAAGCTGAAGCCAAAAA...TCTGGGAAACCGCCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCTGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAACTGGAACTGCCCCATaGATGAAGGAATGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAATGTAP*MKEWSP
Trigger: GGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGT...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAAGGGGGATCATCACTTaGGGAAGGGCCTTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVRGIIT*GRALAV
Trigger: CACGGCCAAGGCCCTTCCCAAAGTGATGATCCCCCT...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGESMAA*YVGMLL
Trigger: GAGCAGCATTCCAACGTACAATGCAGCCATGGACTC...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTATGAGATGCTGGACATaGCCAGCACTGGCGACGAGT +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPMRCWT*PALATS
Trigger: ACTCGTCGCCAGTGCTGGCAATGTCCAGCATCTCAT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTATGAGATGCTGGACATaGCCAGCACTGGCGACGAGT +
Preference number: 5 (lower is better)
Translates to: ERSYIVGGRTDENPILLAMRCWT*PALATS
Trigger: ACTCGTCGCCAGTGCTGGCAATGTCCAGCATCTCAT...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCAGTCTGGTGCCAAGATaGTCGTTTGGCAGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGSLVPR*SFGRRV
Trigger: CACCCTTCTGCCAAACGACAATCTTGGCACCAGACT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCTTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGG +
Preference number: 5 (lower is better)
Translates to: GALSCTITTKPQGPGKPSLMGLT*RSAKIW
Trigger: CCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAA...GGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCATGCTGGGCAGTCTTTTaGCAGCTCACTTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAACWAVF*QLTLPG
Trigger: CCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCA...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGTTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTA +
Preference number: 5 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVFVPFE*AVLQCV
Trigger: TACGCACTGAAGAACGGCCAACTCAAATGGTACGAA...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAELIWV*SQRFCR
Trigger: CCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTC...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPELIWV*SQRFCR
Trigger: CCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTC...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGGGCTCCTTACATGGGCATTCTCAGAGCAACCGGTCTaGGGGAAATTGAGGATTTAC +
Preference number: 5 (lower is better)
Translates to: TAEEEGSVQTAGLLTWAFSEQPV*GKLRIY
Trigger: GTAAATCCTCAATTTCCCCAAGACCGGTTGCTCTGA...GAATGCCCATGTAAGGAGCCCAGCAGTCTGGACAGATCCTTCTTCCTCTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCCCTGGTACTTGTGGCTaGGCACTCTGGGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSPGTCG*ALWEAG
Trigger: ACCTGCTTCCCAGAGTGCCAAGCCACAAGTACCAGG...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGTGGTGGGCAGGCCGACTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: ELMRTPSCLLLAWWWAGRLTSPC*RQIRCG
Trigger: ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAG...TCGGCCTGCCCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CCATGGCTGGGTCACTGTAGGTCCTGCATGAACTTGTCCACCAACTGTGTTTTGTTTGCCCCCAAACCCTaGAGTACCTCCTACAATGTC +
Preference number: 5 (lower is better)
Translates to: PWLGHCRSCMNLSTNCVLFAPKP*STSYNV
Trigger: GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAA...CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCTACAGTGACCCAGCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGGCTTGGGGAAGGGACTaGAGCACAGGAGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLAWGRD*STGERL
Trigger: AAGCCTTTCTCCTGTGCTCAAGTCCCTTCCCCAAGC...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTAGGTTGAAGCCTTGCTaGGGGAAGGGACTTGAGCAC +
Preference number: 5 (lower is better)
Translates to: ERSYIVGGRTDENPILLARLKPC*GKGLEH
Trigger: GTGCTCAAGTCCCTTCCCCAAGCAAGGCTTCAACCT...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCAAACAAAATCAAAACTGGTaGCCTCACCAGCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: HVAGGFPDWPVLHINQIKQNQNW*PHQPWC
Trigger: ACACCAGGGCTGGTGAGGCAACCAGTTTTGATTTTG...TTTGATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGAAACCAAGCAGCACCTaGATTGCCACTTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRKPSST*IATFPP
Trigger: TGGAGGAAAAGTGGCAATCAAGGTGCTGCTTGGTTT...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS GCA 90 bp GAACTTGTGGAAGGAGTTCTTCAGGAAGCTGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCTGCTCAGGGGGATCATCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: ELVEGVLQEAVRVHG*IVRWNAAQGDHHFG
Trigger: CCCAAAGTGATGATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCATGGACTCTAACAGCTTCCTGAAGAACTCCTTCCACAAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp CTGCTTCAGCCTTTGGGCTGTGAACCAGATCTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGTCAAATAGCAGAGCTCGGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LLQPLGCEPDLELFF*ILGHHSQIAELGFG
Trigger: ACCAAAGCCGAGCTCTGCTATTTGACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAGATCTGGTTCACAGCCCAAAGGCTGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTCCAGTCGACAGCTTaGGTAAGGCCTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVLQSTA*VRPHPQ
Trigger: CTGTGGGTGAGGCCTTACCAAAGCTGTCGACTGGAG...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCACTGGAACTGCCCCATaGATGAAGGAATGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSTGTAP*MKEWSP
Trigger: GGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGT...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000559234.5
CDS-3UTR CAA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATATGGCTGCATTGTACGTaGGAATGCTGCTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIWLHCT*ECCSGG
Trigger: TCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCA...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAESMAA*YVGMLL
Trigger: GAGCAGCATTCCAACGTACAATGCAGCCATGGACTC...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ERSYIVGGRTDENPILLAESMAA*YVGMLL
Trigger: GAGCAGCATTCCAACGTACAATGCAGCCATGGACTC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CAGGTGGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGACTGGATGACTGTATaGAACATCTTTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: QVDRSLVRPSLPATLRATDWMTV*NIFFRA
Trigger: TGCCCGGAAAAAGATGTTCAATACAGTCATCCAGTC...GGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGCCACACCTGGCTGCTaGGGGACGGATGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTATPGC*GTDVTV
Trigger: CACGGTGACATCCGTCCCCAAGCAGCCAGGTGTGGC...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTCCTTCACAGCTGACGTaGTATTTGAACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSPSQLT*YLNTQC
Trigger: ACACTGTGTGTTCAAATACAACGTCAGCTGTGAAGG...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGGTTACCTCAGGGACCTaGGACGATGGGGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQVTSGT*DDGEKD
Trigger: GTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAAC...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGG +
Preference number: 5 (lower is better)
Translates to: RSYIVGGRTDENPILLAALMGLT*RSAKIW
Trigger: CCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAA...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGCAAATGGGTGCTAGAAAACCAGGAATCAAGACCTTGTCAGGAGGCATCTACAATCTCGTTCCTGCCATaGGCTTCAGTGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: CKWVLENQESRPCQEASTISFLP*ASVTLR
Trigger: CCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGAT...TGTAGATGCCTCCTGACAAGGTCTTGATTCCTGGTTTTCTAGCACCCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCA +
Preference number: 5 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLSCSAS*FDSSSS
Trigger: TGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCT...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATTTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTA +
Preference number: 5 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDFVPFE*AVLQCV
Trigger: TACGCACTGAAGAACGGCCAACTCAAATGGTACGAA...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTGCAGGAGCTCCCGGTaGCCAGGGGCAATGACCAGT +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLCRSSR*PGAMTS
Trigger: ACTGGTCATTGCCCCTGGCAACCGGGAGCTCCTGCA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTGCAGGAGCTCCCGGTaGCCAGGGGCAATGACCAGT +
Preference number: 5 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNCRSSR*PGAMTS
Trigger: ACTGGTCATTGCCCCTGGCAACCGGGAGCTCCTGCA...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: GFAPKPLSTSYNVPLSTCRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...GCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGCTGACAATGCACTGCTaGGCTAACCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRLTMHC*ANQSFY
Trigger: GTAGAAACTTTGGTTAGCCAAGCAGTGCATTGTCAG...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CAAGGCACTACCCAATGTTCTGTCCAACTTCCTCCTTGTGCTACTAGAGAGCACAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: QGTTQCSVQLPPCATREHKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...GTGCTCTCTAGTAGCACAAGGAGGAAGTTGGACAGAACATTGGGTAGTGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGGACCCTCACTGTGTTTTGCTGTTaGGGTTGTAAATTAACCGTG +
Preference number: 5 (lower is better)
Translates to: LFSRFGLSHLAMAGDGTLTVFCC*GCKLTV
Trigger: CACGGTTAATTTACAACCCAAACAGCAAAACACAGT...GAGGGTCCCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTCACAGTGTGGAGTCCTaGTGTCAAGGTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCHSVES*CQGALV
Trigger: GACCAAAGCACCTTGACACAAGGACTCCACACTGTG...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CAGGAGGTGTCTGTGCCCACGAAGCCTGGTACTTGTGGCTTGGCACTCTGGGAATATTTCTACTCAGGTTaGATTCTTGGGAAAGACCAA +
Preference number: 5 (lower is better)
Translates to: QEVSVPTKPGTCGLALWEYFYSG*ILGKDQ
Trigger: TTGGTCTTTCCCAAGAATCAAACCTGAGTAGAAATA...TTCCCAGAGTGCCAAGCCACAAGTACCAGGCTTCGTGGGCACAGACACCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTCTCCAAGGCAGGGTCTaGGTCCATGGGTTAGAATCA +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPLQGRV*VHGLES
Trigger: TGATTCTAACCCATGGACCAAGACCCTGCCTTGGAG...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560364.5
CDS-3UTR CAA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTATGTTGCTTCTGCAGTaGCATTTCAGTCCTAAGCAT +
Preference number: 5 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSMLLLQ*HFSPKH
Trigger: ATGCTTAGGACTGAAATGCAACTGCAGAAGCAACAT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000560364.5
CDS-3UTR CAA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: RAGSTVLFHLKDELVPMALKGHM*LLQLHF
Trigger: GAAATGCAACTGCAGAAGCAACATGTGACCTTTTAG...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGAGCTTTTTCAGTTGTTaGCAGAAAGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: QRYCFLEEHKGGTKGFQTSFFSC*QKAGFP
Trigger: GGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGCT...CGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGGCCACACCTGGCTGCTaGGGGACGGATGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQATPGC*GTDVTV
Trigger: CACGGTGACATCCGTCCCCAAGCAGCCAGGTGTGGC...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGTTACCTCAGGGACCTaGGACGATGGGGAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKVTSGT*DDGEKD
Trigger: GTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAAC...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCA +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGSCSAS*FDSSSS
Trigger: TGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTATGCTGGGCAGTCTTTTaGCAGCTCACTTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVCWAVF*QLTLPG
Trigger: CCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCA...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAACATAGTCCTGGTTGCTaGGCCACTGTGTCTGGACAA +
Preference number: 5 (lower is better)
Translates to: KDKVQSILTHSHPTAEEEHSPGC*ATVSGQ
Trigger: TTGTCCAGACACAGTGGCCAAGCAACCAGGACTATG...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCTTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTA +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGFVPFE*AVLQCV
Trigger: TACGCACTGAAGAACGGCCAACTCAAATGGTACGAA...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGGCTTGGCACTCTGGGAAGCAGGTGGTTTCTAAGAAATGAGCGGAGCTACAGGCCGGTCTTGGGGAAATaGAGGATTTACCATTTAGAA +
Preference number: 5 (lower is better)
Translates to: WLGTLGSRWFLRNERSYRPVLGK*RIYHLE
Trigger: TTCTAAATGGTAAATCCTCAATTTCCCCAAGACCGG...CCTGTAGCTCCGCTCATTTCTTAGAAACCACCTGCTTCCCAGAGTGCCAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCTCAGAGCAACCGGTCTaGGGGAAATTGAGGATTTAC +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGSEQPV*GKLRIY
Trigger: GTAAATCCTCAATTTCCCCAAGACCGGTTGCTCTGA...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCTGGCCATGGCAGGAGATGGCTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: EYAVFSVWSLTPGHGRRWLTSPC*RQIRCG
Trigger: ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAG...CCATCTCCTGCCATGGCCAGGTGTGAGAGACCAAACCGAGAAAACAGCATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTCTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSLTSPC*RQIRCG
Trigger: ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAG...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GGACAGGTCTTTAGTTCGCCCCTCTTTACCAGCTACTCTCAGAGCAACCGGTCTAATCACTCGCCATTCTaGGCAATTCCTCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: GQVFSSPLFTSYSQSNRSNHSPF*AIPQRF
Trigger: AAACCTTTGAGGAATTGCCAAGAATGGCGAGTGATT...AGACCGGTTGCTCTGAGAGTAGCTGGTAAAGAGGGGCGAACTAAAGACCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTTTTGCCCCCAAACCCTaGAGTACCTCCTACAATGTC +
Preference number: 5 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAFAPKP*STSYNV
Trigger: GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAA...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATCATCTGGTTTCACCTTaGAGAACTCGATCTACAACC +
Preference number: 5 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDHLVSP*RTRSTT
Trigger: GGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATG...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTTTGCCCTGGAAGACTaGACTATGTGGGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLFALED*TMWAFM
Trigger: CATGAAGGCCCACATAGTCAAGTCTTCCAGGGCAAA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTCCGAGAACAACCGGATaGCTGTGCTGGGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCPRTTG*LCWVPA
Trigger: AGCAGGGACCCAGCACAGCAATCCGGTTGTTCTCGG...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TGCCCCCAAACCCTTGAGTACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGCAGTTGCCTCTTACTaGTTTAGCACCAAGATGATC +
Preference number: 5 (lower is better)
Translates to: CPQTLEYLLQCPFKHLRDAVASY*FSTKMI
Trigger: GATCATCTTGGTGCTAAACAAGTAAGAGGCAACTGC...ATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGTACTCAAGGGTTTGGGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGGTGTTCTGCCAGGGATCTCTGCATGCAAGTCTTTGTGCTAAAGACCACCCTAACCCTCTTGCAGAGTTaGGCTAAAGTTTCATTGTGC +
Preference number: 5 (lower is better)
Translates to: GCSARDLCMQVFVLKTTLTLLQS*AKVSLC
Trigger: GCACAATGAAACTTTAGCCAAACTCTGCAAGAGGGT...TAGGGTGGTCTTTAGCACAAAGACTTGCATGCAGAGATCCCTGGCAGAACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTATGTTGCTTCTGCAGTaGCATTTCAGTCCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPMLLLQ*HFSPGS
Trigger: GCTGCCAGGACTGAAATGCAACTGCAGAAGCAACAT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559234.5
CDS TCA 90 bp GCTCTGCCCTGGGAACTGGTTCCGACAGAAGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTTCTTATTTTTGTAGATGCTAGCATC +
Preference number: 5 (lower is better)
Translates to: ALPWELVPTEAPFQS*QLFMRFLIFVDASI
Trigger: GATGCTAGCATCTACAAAAATAAGAAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 90 bp TCCGTCTCTCTGAAAACCAGCTATCAATTTCTCGTCGGGTCATTTTaGTTTCACTTCTCAGGCGGTCCAGTTCCTCATCAAGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SVSLKTSYQFLVGSF*FHFSGGPVPHQEEE
Trigger: CTCTTCCTCTTGATGAGGAACTGGACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGAAATTGATAGCTGGTTTTCAGAGAGACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS-3UTR CAA 90 bp AAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGCAGAGGAAGAACTTCACCACAATGAGTaGGGTAGCAGGAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: KDKVQSILTHSHPTAEEELHHNE*GSRREG
Trigger: TCCTTCTCTCCTGCTACCCAACTCATTGTGGTGAAG...TTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000560364.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTGTGCTCCGATGCCCATaGGCCAGTGTAGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLVLRCP*ASVEPS
Trigger: TGATGGCTCTACACTGGCCAATGGGCATCGGAGCAC...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCCATATGTCCCACAAATaGGGTCATGTCATGGGATCT +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGHMSHK*GHVMGS
Trigger: AGATCCCATGACATGACCCAATTTGTGGGACATATG...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCTCCAGTCGACAGCTTaGGTAAGGCCTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLLQSTA*VRPHPQ
Trigger: CTGTGGGTGAGGCCTTACCAAAGCTGTCGACTGGAG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGACTCCAGTCGACAGCTTaGGTAAGGCCTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRLQSTA*VRPHPQ
Trigger: CTGTGGGTGAGGCCTTACCAAAGCTGTCGACTGGAG...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCTGGTGGACATGGTGTaGGGCATGCACTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQLVDMV*GMHWGL
Trigger: CAGCCCCCAGTGCATGCCCAACACCATGTCCACCAG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQESMAA*YVGMLL
Trigger: GAGCAGCATTCCAACGTACAATGCAGCCATGGACTC...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACGGGGGAGAGGGGAACTaGTTGCTTGCAACCCATTGG +
Preference number: 5 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNGGEGN*LLATHW
Trigger: CCAATGGGTTGCAAGCAACAAGTTCCCCTCTCCCCC...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCCCTTCACAGCTGACGTaGTATTTGAACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGPSQLT*YLNTQC
Trigger: ACACTGTGTGTTCAAATACAACGTCAGCTGTGAAGG...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: VTTKENGKASNANHIASPWQKGG*LVWLLS
Trigger: CGACAACAGCCACACTAGCAACCCACCCTTCTGCCA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: ERSYIVGGRTDENPILLAALSLY*VGVKSG
Trigger: TCCTGACTTCACACCAACCAAATACAAGGAGAGAGC...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTAALSLY*VGVKSG
Trigger: TCCTGACTTCACACCAACCAAATACAAGGAGAGAGC...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAATCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQSRRVI*VSLLRR
Trigger: CCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGA...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTATCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVSRRVI*VSLLRR
Trigger: CCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGA...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCCTCAGGTTCTTCAGGTaGATTTTAATGGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGLRFFR*ILMGLT
Trigger: AGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAG...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCA +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPSCSAS*FDSSSS
Trigger: TGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp ACCTCCTACAATGTCCCTTTAAGCACCTGCGTGATGACTGCCTCCCTCATCATCGCTAAAGTAGAGTTCTaGTTTCCAAGTTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: TSYNVPLSTCVMTASLIIAKVEF*FPSLGT
Trigger: TGTCCCCAAACTTGGAAACAAGAACTCTACTTTAGC...GATGATGAGGGAGGCAGTCATCACGCAGGTGCTTAAAGGGACATTGTAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTCAGAGCAACCGGTCTaGGGGAAATTGAGGATTTAC +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPSEQPV*GKLRIY
Trigger: GTAAATCCTCAATTTCCCCAAGACCGGTTGCTCTGA...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCAATCACTCGCCATTCTaGGCAATTCCTCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVNHSPF*AIPQRF
Trigger: AAACCTTTGAGGAATTGCCAAGAATGGCGAGTGATT...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATATTTGCCCCCAAACCCTaGAGTACCTCCTACAATGTC +
Preference number: 5 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIFAPKP*STSYNV
Trigger: GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAA...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTGAAAGGAGCTTTAAGTaGTACAATCACTACCAAACC +
Preference number: 5 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAERSFK*YNHYQT
Trigger: GGTTTGGTAGTGATTGTACAACTTAAAGCTCCTTTC...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAATTGTGTCAAGGTGCTTaGGTCCACCTGAACAGCCAC +
Preference number: 5 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQLCQGA*VHLNSH
Trigger: GTGGCTGTTCAGGTGGACCAAAGCACCTTGACACAA...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ACTGGCTGGATTCAGGGTTTTGCCCCCAAACCCTTGAGTACCTCCTACAATGTCTTTAAAATTTTCTTCTaGGCTGGCTCTCCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: TGWIQGFAPKPLSTSYNVFKIFF*AGSPLL
Trigger: CAGGAGAGGAGAGCCAGCCAAGAAGAAAATTTTAAA...GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAAACCCTGAATCCAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGAGCTTTAAGTTGTACAATCACTACCAAACCCCAAGGCCCTGGCAAGCCATCCACAAAAACAGGGCAGTaGCCTCTTACTTGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: GALSCTITTKPQGPGKPSTKTGQ*PLTCLA
Trigger: TGCTAAACAAGTAAGAGGCAACTGCCCTGTTTTTGT...GGATGGCTTGCCAGGGCCTTGGGGTTTGGTAGTGATTGTACAACTTAAAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ACCTGCGTGATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAGGAGATGGGACCCTCTaGCAGAGTTTGGCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: TCVMTASLIIAFDHLSRIGDGTL*QSLAKV
Trigger: AACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCC...TATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCATCACGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGACTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRLKGHM*LLQLHF
Trigger: GAAATGCAACTGCAGAAGCAACATGTGACCTTTTAG...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTAGCTTTTTCAGTTGTTaGCAGAAAGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: RSYIVGGRTDENPILLAASFFSC*QKAGFP
Trigger: GGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGCT...AGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GCTTCCTTGAGGAACACAAAGGGGGCACAAAGGGGTTCCAGACGTAGCTTTGTGTTTTTGGCTTCAGCTTaGCCTTTCATTATCTTCATG +
Preference number: 5 (lower is better)
Translates to: ASLRNTKGAQRGSRRSFVFLASA*PFIIFM
Trigger: CATGAAGATAATGAAAGGCAAAGCTGAAGCCAAAAA...CACAAAGCTACGTCTGGAACCCCTTTGTGCCCCCTTTGTGTTCCTCAAGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTTTTTTGGCTTCAGCTTaGCCTTTCATTATCTTCATG +
Preference number: 5 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAFLASA*PFIIFM
Trigger: CATGAAGATAATGAAAGGCAAAGCTGAAGCCAAAAA...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGGACTGGATGACTGTATaGAACATCTTTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLDWMTV*NIFFRA
Trigger: TGCCCGGAAAAAGATGTTCAATACAGTCATCCAGTC...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GAAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTCCTTCACAGCTGACGTaGTATTTGAACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: ERSYIVGGRTDENPILLAPSQLT*YLNTQC
Trigger: ACACTGTGTGTTCAAATACAACGTCAGCTGTGAAGG...AGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTATTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVLLVWL*SECRLP
Trigger: AGGTAACCTGCATTCCGACAACAGCCACACTAGCAA...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GATCATCTTTCAAGGATAAGGTCCAGAGCATACTCACTCACTCTCATCCAACAGTCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: DHLSRIRSRAYSLTLIQQSGALS*YLVGVK
Trigger: CTTCACACCAACCAAATACAAGGAGAGAGCCCCTGA...CTGTTGGATGAGAGTGAGTGAGTATGCTCTGGACCTTATCCTTGAAAGATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCATGCTGGGCAGTCTTTTaGCAGCTCACTTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: VTTKENGKASNANHIASPCWAVF*QLTLPG
Trigger: CCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCA...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTCAGCAAACCACTGCTaGACCTGCTGGGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLSANHC*TCWELI
Trigger: GATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAGCAGAGAGTCGGGTTaGGCTCTTCCACGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNSRESG*ALPRGR
Trigger: CCTGCCACGTGGAAGAGCCAAACCCGACTCTCTGCT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTCTGACAATGCACTGCTaGGCTAACCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPLTMHC*ANQSFY
Trigger: GTAGAAACTTTGGTTAGCCAAGCAGTGCATTGTCAG...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCACATCTGGTTTCACCTTaGAGAACTCGATCTACAACC +
Preference number: 5 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAHLVSP*RTRSTT
Trigger: GGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATG...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAACACAGTGTGGAGTCCTaGTGTCAAGGTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKHSVES*CQGALV
Trigger: GACCAAAGCACCTTGACACAAGGACTCCACACTGTG...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AGGGCAGGCAGCACTGTACTTTTCCACCTGAAAGATGAGCTAGTGCCCATGGCTCAGCATATAACTACCTaGAGAATGGATGTGATATGT +
Preference number: 5 (lower is better)
Translates to: RAGSTVLFHLKDELVPMAQHITT*RMDVIC
Trigger: ACATATCACATCCATTCTCAAGGTAGTTATATGCTG...AGCCATGGGCACTAGCTCATCTTTCAGGTGGAAAAGTACAGTGCTGCCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCAACCTGTTGGTTCCATTaGCACTCAGAGCAAACCAAG +
Preference number: 5 (lower is better)
Translates to: TASLIIAFDHLSRIRSRATCWFH*HSEQTK
Trigger: CTTGGTTTGCTCTGAGTGCAAATGGAACCAACAGGT...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CTCCAGCCTTCACCCTTACTAATGGGCCAGTGTGTTATTCCTTCCCAAACCATAATAGAAACTTCTCTGTaGAAGGACTGCGTCCCCATT +
Preference number: 5 (lower is better)
Translates to: LQPSPLLMGQCVIPSQTIIETSL*KDCVPI
Trigger: AATGGGGACGCAGTCCTTCAACAGAGAAGTTTCTAT...TATGGTTTGGGAAGGAATAACACACTGGCCCATTAGTAAGGGTGAAGGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TTCCACGTGGCAGGCGGTTTCCCAGACTGGCCAGTCCTTCACATTAATCAGATCTATTTCTACTCAGGTTaGATTCTTGGGAAAGACCAA +
Preference number: 5 (lower is better)
Translates to: FHVAGGFPDWPVLHINQIYFYSG*ILGKDQ
Trigger: TTGGTCTTTCCCAAGAATCAAACCTGAGTAGAAATA...GATCTGATTAATGTGAAGGACTGGCCAGTCTGGGAAACCGCCTGCCACGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGGTCTATTTGCTGCCTTaGACGGCTATCACAATTCAG +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLVYLLP*TAITIQ
Trigger: CTGAATTGTGATAGCCGTCAAAGGCAGCAAATAGAC...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432768.6
CDS-3UTR CAA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTAGCTTTTTCAGTTGTTaGCAGAAAGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTASFFSC*QKAGFP
Trigger: GGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGCT...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACGTGCTCCGATGCCCATaGGCCAGTGTAGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNVLRCP*ASVEPS
Trigger: TGATGGCTCTACACTGGCCAATGGGCATCGGAGCAC...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCGGCATGGGGGTTTTTaGCAGAGCTGGCAGATGCCT +
Preference number: 5 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQRHGGF*QSWQMP
Trigger: AGGCATCTGCCAGCTCTGCAAAAAACCCCCATGCCG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAAGGGGAACTTGTTGCTaGCAACCCATTGGCCATCAA +
Preference number: 5 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKRGTCC*QPIGHQ
Trigger: TTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCT...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGGGGGGAGAGGGGAACTaGTTGCTTGCAACCCATTGG +
Preference number: 5 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQGGEGN*LLATHW
Trigger: CCAATGGGTTGCAAGCAACAAGTTCCCCTCTCCCCC...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACTGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCG +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNWQKGG*LVWLLS
Trigger: CGACAACAGCCACACTAGCAACCCACCCTTCTGCCA...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTTGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLCQDCR*AEGWVA
Trigger: AGCAACCCACCCTTCTGCCAAACGACAATCTTGGCA...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAATCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKSGALS*YLVGVK
Trigger: CTTCACACCAACCAAATACAAGGAGAGAGCCCCTGA...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAATTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGG +
Preference number: 5 (lower is better)
Translates to: HLMQQRSLQRYCFLEEHKLMGLT*RSAKIW
Trigger: CCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAA...TTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGATTTTTGCAGCTCACTTaGCCTGGGAGCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: DDFTISDESNCIQRKGIRFLQLT*PGSCSA
Trigger: GGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAA...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTCAGCAAACCACTGCTaGACCTGCTGGGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTSANHC*TCWELI
Trigger: GATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGA...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TTCCAAGAAGTCAACAAATCCCTCCAGCCTTCACCCTTACTAATGGGCCAGTGTCCGGTCTTGGGGAAATaGAGGATTTACCATTTAGAA +
Preference number: 5 (lower is better)
Translates to: FQEVNKSLQPSPLLMGQCPVLGK*RIYHLE
Trigger: TTCTAAATGGTAAATCCTCAATTTCCCCAAGACCGG...ACACTGGCCCATTAGTAAGGGTGAAGGCTGGAGGGATTTGTTGACTTCTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTCTCACAAGTCCCTGTTaGAGACAAATAAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPLTSPC*RQIRCG
Trigger: ACCACATCTTATTTGTCTCAAACAGGGACTTGTGAG...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CCCTGTTTGAGACAAATAAGATGTGGTCCCTATTGGGACAGGGAGGGCAGAAGAACCAATCTGAGGATATaGGTCCAAAAAGAGACAAGA +
Preference number: 5 (lower is better)
Translates to: PCLRQIRCGPYWDREGRRTNLRI*VQKETR
Trigger: TCTTGTCTCTTTTTGGACCAATATCCTCAGATTGGT...TCTTCTGCCCTCCCTGTCCCAATAGGGACCACATCTTATTTGTCTCAAACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTGCTTGGACCAATCTGAGGATATaGGTCCAAAAAGAGACAAGA +
Preference number: 5 (lower is better)
Translates to: TLWEEELMRTPSCLLLAWTNLRI*VQKETR
Trigger: TCTTGTCTCTTTTTGGACCAATATCCTCAGATTGGT...CCAAGCAAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGACTCCTCTCCTGCAAGTaGCCTTTATCCACTTGGGGT +
Preference number: 5 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRLLSCK*PLSTWG
Trigger: ACCCCAAGTGGATAAAGGCAACTTGCAGGAGAGGAG...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAAAACCAAGCAGCACCTaGATTGCCACTTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRKPSST*IATFPP
Trigger: TGGAGGAAAAGTGGCAATCAAGGTGCTGCTTGGTTT...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TCCAAGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCGCAGTTGCCTCTTACTaGTTTAGCACCAAGATGATC +
Preference number: 5 (lower is better)
Translates to: SKCLFSEGKQSLAILGNSAVASY*FSTKMI
Trigger: GATCATCTTGGTGCTAAACAAGTAAGAGGCAACTGC...GGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGACAAAAACAGGGCAGTaGCCTCTTACTTGTTTAGCA +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLTKTGQ*PLTCLA
Trigger: TGCTAAACAAGTAAGAGGCAACTGCCCTGTTTTTGT...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACCTCCAAGGCAGGGTCTaGGTCCATGGGTTAGAATCA +
Preference number: 5 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNLQGRV*VHGLES
Trigger: TGATTCTAACCCATGGACCAAGACCCTGCCTTGGAG...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS GCA 90 bp CTGCACCCACTGCATACAAAGGTTGGGTCTTTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCCACAAATTGGGTCATGTCATGGGAT +
Preference number: 5 (lower is better)
Translates to: LHPLHTKVGSLLKSV*SEFICPTNWVMSWD
Trigger: ATCCCATGACATGACCCAATTTGTGGGACATATGAACTCAGAGCACACAGACTTTAATAAAGACCCAACCTTTGTATGCAGTGGGTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTTCAGCAGTTGAGAGCTaGTCCCATAAGGGGCCTAAC +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTSAVES*SHKGPN
Trigger: GTTAGGCCCCTTATGGGACAAGCTCTCAACTGCTGA...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGATCAGCAGTTGAGAGCTaGTCCCATAAGGGGCCTAAC +
Preference number: 5 (lower is better)
Translates to: DDFTISDESNCIQRKGIRSAVES*SHKGPN
Trigger: GTTAGGCCCCTTATGGGACAAGCTCTCAACTGCTGA...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACATATGTCCCACAAATaGGGTCATGTCATGGGATCT +
Preference number: 5 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVHMSHK*GHVMGS
Trigger: AGATCCCATGACATGACCCAATTTGTGGGACATATG...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTAGACTGGATGACTGTATaGAACATCTTTTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: DMKRSRSSLNAAEISSKVDWMTV*NIFFRA
Trigger: TGCCCGGAAAAAGATGTTCAATACAGTCATCCAGTC...TACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACGTTTCATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACATGAGATGCTGGACATaGCCAGCACTGGCGACGAGT +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNMRCWT*PALATS
Trigger: ACTCGTCGCCAGTGCTGGCAATGTCCAGCATCTCAT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCAAGGGGAACTTGTTGCTaGCAACCCATTGGCCATCAA +
Preference number: 5 (lower is better)
Translates to: VTTKENGKASNANHIASPRGTCC*QPIGHQ
Trigger: TTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCT...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAGCATCAAGGAAGGCTaGGGAGGTTATGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNSIKEG*GGYAGA
Trigger: TGCCCCAGCATAACCTCCCAAGCCTTCCTTGATGCT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTTTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCT +
Preference number: 5 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCLLVWL*SECRLP
Trigger: AGGTAACCTGCATTCCGACAACAGCCACACTAGCAA...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTAGTCTGGTGCCAAGATaGTCGTTTGGCAGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTSLVPR*SFGRRV
Trigger: CACCCTTCTGCCAAACGACAATCTTGGCACCAGACT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGATCTCGTTCCTGCCATaGGCTTCAGTGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQISFLP*ASVTLR
Trigger: CCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGAT...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAGAACCCCATCTTGCTaGCTGCTTGCTTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQRTPSC*LLAWWW
Trigger: CCACCACCAAGCAAGCAGCAAGCAAGATGGGGTTCT...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAACTGACAATGCACTGCTaGGCTAACCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQLTMHC*ANQSFY
Trigger: GTAGAAACTTTGGTTAGCCAAGCAGTGCATTGTCAG...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCCCGGTCTTGGGGAAATaGAGGATTTACCATTTAGAA +
Preference number: 5 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTPVLGK*RIYHLE
Trigger: TTCTAAATGGTAAATCCTCAATTTCCCCAAGACCGG...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CGTAGCCGGTCATCACTTAATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTACTGTGTTTTGCTGTTaGGGTTGTAAATTAACCGTG +
Preference number: 5 (lower is better)
Translates to: RSRSSLNAAEISSKVLLPTVFCC*GCKLTV
Trigger: CACGGTTAATTTACAACCCAAACAGCAAAACACAGT...AGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCATTAAGTGATGACCGGCTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ACAAGGCAAAGCAAGCCTGACATGAAACGTAGCCGGTCATCACTTAATGCAGCAGAAAGGAGCTTTAAGTaGTACAATCACTACCAAACC +
Preference number: 5 (lower is better)
Translates to: TRQSKPDMKRSRSSLNAAERSFK*YNHYQT
Trigger: GGTTTGGTAGTGATTGTACAACTTAAAGCTCCTTTC...TGCTGCATTAAGTGATGACCGGCTACGTTTCATGTCAGGCTTGCTTTGCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGCTTCAAGTCACGTTAATTTaGAATCATCCACTTACGGAA +
Preference number: 5 (lower is better)
Translates to: GPTLWEEELMRTPSCLLLQVTLI*NHPLTE
Trigger: TTCCGTAAGTGGATGATTCAAAATTAACGTGACTTG...AAGCAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ACCCAAGGCTTAAGTGATAGAGTATGCTGTTTTCTCGGTTTGGTCTCTCACACCGAGGCCCATTTCAAATaGTACAAGCAATTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: TQGLSDRVCCFLGLVSHTEAHFK*YKQFVR
Trigger: ACGGACAAATTGCTTGTACAATTTGAAATGGGCCTC...GGTGTGAGAGACCAAACCGAGAAAACAGCATACTCTATCACTTAAGCCTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp ATGCAGCAGAGATCTCTTCAAAGGTACTGCTTCCTTGAGGAACACAAAGGGGGCAACATGAAGATGGATTaGATTTTTGGCAATAGTCCC +
Preference number: 5 (lower is better)
Translates to: MQQRSLQRYCFLEEHKGGNMKMD*IFGNSP
Trigger: GGGACTATTGCCAAAAATCAAATCCATCTTCATGTT...GCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTTGAAGAGATCTCTGCTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS TCA 90 bp CCCACTGCATACAAAGGTTGGGTCTTTATTAAAGTCTGTGTGCTCTaGGTTCATATGTCCCACAAATTGGGTCATGTCATGGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: PTAYKGWVFIKVCVL*VHMSHKLGHVMGSE
Trigger: TTCAGATCCCATGACATGACCCAATTTGTGGGACATATGAACTCAGAGCACACAGACTTTAATAAAGACCCAACCTTTGTATGCAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACTCAGCAGTTGAGAGCTaGTCCCATAAGGGGCCTAAC +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNSAVES*SHKGPN
Trigger: GTTAGGCCCCTTATGGGACAAGCTCTCAACTGCTGA...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAAGGTCCTACATTGTGGGAGGAAGAACTGATGAGAACCCCATCTTGCTTGCTGTTTTTGGCTTCAGCTTaGCCTTTCATTATCTTCATG +
Preference number: 5 (lower is better)
Translates to: KGPTLWEEELMRTPSCLLFLASA*PFIIFM
Trigger: CATGAAGATAATGAAAGGCAAAGCTGAAGCCAAAAA...CAGCAAGCAAGATGGGGTTCTCATCAGTTCTTCCTCCCACAATGTAGGACCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTGGCTGCATTGTACGTaGGAATGCTGCTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNWLHCT*ECCSGG
Trigger: TCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTAGGGGAACTTGTTGCTaGCAACCCATTGGCCATCAA +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTRGTCC*QPIGHQ
Trigger: TTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLALSLY*VGVKSG
Trigger: TCCTGACTTCACACCAACCAAATACAAGGAGAGAGC...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTTTTTGCAGCTCACTTaGCCTGGGAGCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNFLQLT*PGSCSA
Trigger: GGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AGTGTCTGTTCTCTGAAGGAAAGCAATCACTCGCCATTCTTGGCAATTCCTCAACCGGTCTTGGGGAAATaGAGGATTTACCATTTAGAA +
Preference number: 5 (lower is better)
Translates to: SVCSLKESNHSPFLAIPQPVLGK*RIYHLE
Trigger: TTCTAAATGGTAAATCCTCAATTTCCCCAAGACCGG...TTGAGGAATTGCCAAGAATGGCGAGTGATTGCTTTCCTTCAGAGAACAGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ATGACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAAATCACTCGCCATTCTaGGCAATTCCTCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: MTASLIIAFDHLSRIRSRNHSPF*AIPQRF
Trigger: AAACCTTTGAGGAATTGCCAAGAATGGCGAGTGATT...TCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTCCACAACTGCCCATTaGCTCAGACAATGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNSTTAH*LRQWSF
Trigger: AAAGCTCCATTGTCTGAGCAAATGGGCAGTTGTGGA...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAGGAGATGGGACCCTCTaGCAGAGTTTGGCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: DDFTISDESNCIQRKGIRGDGTL*QSLAKV
Trigger: AACTTTAGCCAAACTCTGCAAGAGGGTCCCATCTCC...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTATGTTGCTTCTGCAGTaGCATTTCAGTCCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLMLLLQ*HFSPPW
Trigger: CCAAGGAGGACTGAAATGCAACTGCAGAAGCAACAT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS-3UTR CAA 90 bp ATACTCACTCACTCTCATCCAACAGCAGAGGAAGAAGGATCTGTCCAGACTGCTAATCACTTTGTAGCTTaGGGCAAAATTCTTAAGCTG +
Preference number: 5 (lower is better)
Translates to: ILTHSHPTAEEEGSVQTANHFVA*GKILKL
Trigger: CAGCTTAAGAATTTTGCCCAAAGCTACAAAGTGATT...AGCAGTCTGGACAGATCCTTCTTCCTCTGCTGTTGGATGAGAGTGAGTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560364.5
CDS-3UTR CAA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCACATATGTCCCACAAATaGGGTCATGTCATGGGATCT +
Preference number: 5 (lower is better)
Translates to: VTTKENGKASNANHIASPHMSHK*GHVMGS
Trigger: AGATCCCATGACATGACCCAATTTGTGGGACATATG...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTCTCAGGTTCTTCAGGTaGATTTTAATGGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLLRFFR*ILMGLT
Trigger: AGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAG...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACGCTCTGCCAGTTTGTTaGACTCATCATCCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNALPVC*THHPQG
Trigger: ACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGC...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
CDS-3UTR CAA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGAAATAGGCTGCAAAACTaGCCAAGTACTCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIRNRLQN*PSTHKS
Trigger: GGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATT...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTAGGTCCTGCATGAACTaGTCCACCAACTGTGTTTTG +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTRSCMN*STNCVL
Trigger: CAAAACACAGTTGGTGGACAAGTTCATGCAGGACCT...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
CDS-3UTR CAA 90 bp TATCAGAATGATCATCTGGTTTCACCTTTGAGAACTCGATCTACAACCCCATGTCATCTGGTTTCACCTTaGAGAACTCGATCTACAACC +
Preference number: 5 (lower is better)
Translates to: YQNDHLVSPLRTRSTTPCHLVSP*RTRSTT
Trigger: GGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATG...ACATGGGGTTGTAGATCGAGTTCTCAAAGGTGAAACCAGATGATCATTCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ACTGCCTCCCTCATCATCGCTTTTGATCATCTTTCAAGGATAAGGTCCAGAGCACAGCATATAACTACCTaGAGAATGGATGTGATATGT +
Preference number: 5 (lower is better)
Translates to: TASLIIAFDHLSRIRSRAQHITT*RMDVIC
Trigger: ACATATCACATCCATTCTCAAGGTAGTTATATGCTG...TGCTCTGGACCTTATCCTTGAAAGATGATCAAAAGCGATGATGAGGGAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp GATCTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGCAAAATCAAAACTGGTaGCCTCACCAGCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: DLITEKLWSMIQTPMKKQQNQNW*PHQPWC
Trigger: ACACCAGGGCTGGTGAGGCAACCAGTTTTGATTTTG...CTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTTCAAAGAGGTCAGATTaGTGGGCAGGCAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTSKRSD*WAGKSS
Trigger: TGAGCTCTTGCCTGCCCACAAATCTGACCTCTTTGA...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS GCA 90 bp CAGTTGCATTTCAGTCAGATGTGTTGCTTTGTAACTTCAAGGATGTaGTATTTTCTGATGTTCTTCCATTCGGGTTTTCCTGGTGTGGAT +
Preference number: 5 (lower is better)
Translates to: QLHFSQMCCFVTSRM*YFLMFFHSGFPGVD
Trigger: ATCCACACCAGGAAAACCCGAATGGAAGAACATCAGAAAATAGCACATCCTTGAAGTTACAAAGCAACACATCTGACTGAAATGCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419740.6
ENST00000560759.5
CDS-3UTR CAA 90 bp GTAACAACTAAAGAGAATGGTAAAGCATCCAACGCTAATCACATTGCCAGTCCACTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTC +
Preference number: 5 (lower is better)
Translates to: VTTKENGKASNANHIASPLKGHM*LLQLHF
Trigger: GAAATGCAACTGCAGAAGCAACATGTGACCTTTTAG...TGGACTGGCAATGTGATTAGCGTTGGATGCTTTACCATTCTCTTTAGTTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACTCCTTCACAGCTGACGTaGTATTTGAACACACAGTGT +
Preference number: 5 (lower is better)
Translates to: YFIHWKVKERSYIVGGRTPSQLT*YLNTQC
Trigger: ACACTGTGTGTTCAAATACAACGTCAGCTGTGAAGG...AGTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
CDS-3UTR CAA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTAGGAAAGGTCCTACATaGTGGGAGGAAGAACTGATG +
Preference number: 5 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTRKGPT*WEEELM
Trigger: CATCAGTTCTTCCTCCCACAATGTAGGACCTTTCCT...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGACTGACAATGCACTGCTaGGCTAACCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: DDFTISDESNCIQRKGIRLTMHC*ANQSFY
Trigger: GTAGAAACTTTGGTTAGCCAAGCAGTGCATTGTCAG...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATAAAGGTACTGCTTCCTaGAGGAACACAAAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNKGTAS*RNTKGA
Trigger: TGCCCCCTTTGTGTTCCTCAAGGAAGCAGTACCTTT...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ATGCAAGTCTTTGTGCTAAAGACCACCCTACCTCTGATAATTCCAAGAAGTCAAGCTAAAGTAGAGTTCTaGTTTCCAAGTTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: MQVFVLKTTLPLIIPRSQAKVEF*FPSLGT
Trigger: TGTCCCCAAACTTGGAAACAAGAACTCTACTTTAGC...TTGACTTCTTGGAATTATCAGAGGTAGGGTGGTCTTTAGCACAAAGACTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AGAGAACAGACACAGGTCATTTTTAGAGATGACGTAACTGACAATGCACTGCTTAATCACTCGCCATTCTaGGCAATTCCTCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: REQTQVIFRDDVTDNALLNHSPF*AIPQRF
Trigger: AAACCTTTGAGGAATTGCCAAGAATGGCGAGTGATT...AAGCAGTGCATTGTCAGTTACGTCATCTCTAAAAATGACCTGTGTCTGTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTTTGCCCCCAAACCCTaGAGTACCTCCTACAATGTC +
Preference number: 5 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNFAPKP*STSYNV
Trigger: GACATTGTAGGAGGTACTCAAGGGTTTGGGGGCAAA...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp ATAGGCTGCAAAACTTGCCAAGTACTCACAAGTCCCTGTTTGAGACAAATAAGAGAGGCCCATTTCAAATaGTACAAGCAATTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: IGCKTCQVLTSPCLRQIREAHFK*YKQFVR
Trigger: ACGGACAAATTGCTTGTACAATTTGAAATGGGCCTC...TCTTATTTGTCTCAAACAGGGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309060.7
ENST00000421422.1
CDS-3UTR CAA 90 bp CTATTTTATCCATTGGAAGGTAAAGGAAAGGTCCTACATTGTGGGAGGAAGAACAGTTCGGGATTAGCTTaGCGGAAATATGCTCACATA +
Preference number: 5 (lower is better)
Translates to: LFYPLEGKGKVLHCGRKNSSGLA*RKYAHI
Trigger: TATGTGAGCATATTTCCGCAAAGCTAATCCCGAACT...GTTCTTCCTCCCACAATGTAGGACCTTTCCTTTACCTTCCAATGGATAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560361.5
CDS-3UTR CAA 90 bp GATGATTTTACTATCTCTGACGAGTCCAACTGCATACAGAGAAAAGGGATAAGAAGCTTTTTCAGTTGTTaGCAGAAAGCAGGTTTTCCC +
Preference number: 5 (lower is better)
Translates to: DDFTISDESNCIQRKGIRSFFSC*QKAGFP
Trigger: GGGAAAACCTGCTTTCTGCAAACAACTGAAAAAGCT...TCTTATCCCTTTTCTCTGTATGCAGTTGGACTCGTCAGAGATAGTAAAATCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309060.7
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACAATAGGCTGCAAAACTaGCCAAGTACTCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNNRLQN*PSTHKS
Trigger: GGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATT...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTAATAGGCTGCAAAACTaGCCAAGTACTCACAAGTCC +
Preference number: 5 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTNRLQN*PSTHKS
Trigger: GGACTTGTGAGTACTTGGCAAGTTTTGCAGCCTATT...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS CCA 90 bp TCTTTATTAAAGTCTGTGTGCTCTGAGTTCATATGTCCCACAAATTaGGTCATGTCATGGGATCTGAAATCGCAGTATTTACAGGAATAT +
Preference number: 5 (lower is better)
Translates to: SLLKSVCSEFICPTN*VMSWDLKSQYLQEY
Trigger: ATATTCCTGTAAATACTGCGATTTCAGATCCCATGACATGACCCAATTTGTGGGACATATGAACTCAGAGCACACAGACTTTAATAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS-3UTR CAA 90 bp CTGATAACTGAAAAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATGCTAAAGTAGAGTTCTaGTTTCCAAGTTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: LITEKLWSMIQTPMKKQNAKVEF*FPSLGT
Trigger: TGTCCCCAAACTTGGAAACAAGAACTCTACTTTAGC...ATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTTTTCAGTTATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp TGTAAATTAACCGTGAATACAAGTAACCAAGAAAATCCTCTCCACAGACCAACTACTGTGTTTTGCTGTTaGGGTTGTAAATTAACCGTG +
Preference number: 5 (lower is better)
Translates to: CKLTVNTSNQENPLHRPTTVFCC*GCKLTV
Trigger: CACGGTTAATTTACAACCCAAACAGCAAAACACAGT...AGTTGGTCTGTGGAGAGGATTTTCTTGGTTACTTGTATTCACGGTTAATTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000559234.5
ENST00000560364.5
CDS-3UTR CAA 90 bp AAGTTATGGTCCATGATTCAAACTCCCATGAAAAAGCAGAATTACGGTAACAACTTTTTGGCTTCAGCTTaGCCTTTCATTATCTTCATG +
Preference number: 5 (lower is better)
Translates to: KLWSMIQTPMKKQNYGNNFLASA*PFIIFM
Trigger: CATGAAGATAATGAAAGGCAAAGCTGAAGCCAAAAA...GTTGTTACCGTAATTCTGCTTTTTCATGGGAGTTTGAATCATGGACCATAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309060.7
ENST00000544979.6
ENST00000559234.5
ENST00000560364.5
CDS GCA 72 bp CCGGAGCCGCGGACTGCTGAGCGGCGGGGACGCAGCTaGACCAACCGACTCCGGGCCGCTCGGCTGGGCTCG +
Preference number: 6 (lower is better)
Translates to: PEPRTAERRGRS*TNRLRAARLGS
Trigger: CGAGCCCAGCCGAGCGGCCCGGAGTCGGTTGGTGCAGCTGCGTCCCCGCCGCTCAGCAGTCCGCGGCTCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683867.1
CDS GCA 72 bp AAGGGCCCTCGGGCGTGGACGCAGGCGGCTCTCGGGTaGACACGCGGAACGCACACTCGGGCATGCACTCTC +
Preference number: 6 (lower is better)
Translates to: KGPRAWTQAALG*TRGTHTRACTL
Trigger: GAGAGTGCATGCCCGAGTGTGCGTTCCGCGTGTGCACCCGAGAGCCGCCTGCGTCCACGCCCGAGGGCCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS CCA 72 bp TGCCACATCCCAGCAGAGTGCAAGGGCCCTCGGGCGTaGACGCAGGCGGCTCTCGGGTGCACACGCGGAACG +
Preference number: 6 (lower is better)
Translates to: CHIPAECKGPRA*TQAALGCTRGT
Trigger: CGTTCCGCGTGTGCACCCGAGAGCCGCCTGCGTCCACGCCCGAGGGCCCTTGCACTCTGCTGGGATGTGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS GCA 72 bp GCTCTCGGGTGCACACGCGGAACGCACACTCGGGCATaGACTCTCACACGGTCAGGCGGGCCTGCGCGAACG +
Preference number: 6 (lower is better)
Translates to: ALGCTRGTHTRA*TLTRSGGPART
Trigger: CGTTCGCGCAGGCCCGCCTGACCGTGTGAGAGTGCATGCCCGAGTGTGCGTTCCGCGTGTGCACCCGAGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS CCA 72 bp CAGCCTGGGGACTCGATGTGTCAAAGGGCTCTGAGCTaGCCTCAGGGACACGGGGCTCCCACGACTCACTGT +
Preference number: 6 (lower is better)
Translates to: QPGDSMCQRALS*PQGHGAPTTHC
Trigger: ACAGTGAGTCGTGGGAGCCCCGTGTCCCTGAGGCCAGCTCAGAGCCCTTTGACACATCGAGTCCCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp GCTGCCCCACAACGTGACCTGGAAGAGCGGCCTGGATaGGATGCTGGACATTGCCAGCACTGGCGACGAGTG +
Preference number: 6 (lower is better)
Translates to: AAPQRDLEERPG*DAGHCQHWRRV
Trigger: CACTCGTCGCCAGTGCTGGCAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp GCACCACCTCTGGCCGTGGCAGACCCGTCTGGGCCATaGTGGAGTCATAGTCCTGGTTGCTTGGCCACTGTG +
Preference number: 6 (lower is better)
Translates to: APPLAVADPSGP*WSHSPGCLATV
Trigger: CACAGTGGCCAAGCAACCAGGACTATGACTCCATCATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp TTCGAGTCCTGGCTCTGCCGCCTTCACTGGTCGAGCTaGCGCTCTTTACACCGGGGGCATGGGCTGCCACAT +
Preference number: 6 (lower is better)
Translates to: FESWLCRLHWSS*RSLHRGHGLPH
Trigger: ATGTGGCAGCCCATGCCCCCGGTGTAAAGAGCGTCAGCTCGACCAGTGAAGGCGGCAGAGCCAGGACTCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS GCA 72 bp CCCCTTCAGCACTGGGCTCACCCGCTAGGTCAGGAGTaGTGGTGCTCTCAGGGATGCTCTGCTCCACAACCA +
Preference number: 6 (lower is better)
Translates to: PLQHWAHPLGQE*WCSQGCSAPQP
Trigger: TGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTGAGCCCAGTGCTGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 72 bp TGGTGGACATGGTGTTGGGCATGCACTGGGGGCTGCTaGTGGAGGGAGAGGAACTGTGCTATGCCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: WWTWCWACTGGC*WRERNCAMPAG
Trigger: GCCAGCTGGCATAGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCATGCCCAACACCATGTCCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp ACCAGTACCAGGGCCCTGGTCCTCACTGCCTGTGTCTaGCACGGCTCTGGTCTCCTCCCCCATTTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: TSTRALVLTACV*HGSGLLPHFLS
Trigger: GCTGAGAAAATGGGGGAGGAGACCAGAGCCGTGGCAGACACAGGCAGTGAGGACCAGGGCCCTGGTACTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TCCTGCTGGGGTCCTTCAGGCAAGGTCTCAGCGGGCTaGGCCTCCATGCTGGCATCTTGCAACACCACAGTC +
Preference number: 6 (lower is better)
Translates to: SCWGPSGKVSAG*ASMLASCNTTV
Trigger: GACTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAGGACCCCAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000419740.6
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp CCCTCCTGTACCCTCTGGCTGCCCCACAACGTGACCTaGAAGAGCGGCCTGGATGAGATGCTGGACATTGCC +
Preference number: 6 (lower is better)
Translates to: PSCTLWLPHNVT*KSGLDEMLDIA
Trigger: GGCAATGTCCAGCATCTCATCCAGGCCGCTCTTCCAGGTCACGTTGTGGGGCAGCCAGAGGGTACAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TGCGTACCTGCTATCTCCAAACCAGCGCACCACCTCTaGCCGTGGCAGACCCGTCTGGGCCATGATGGAGTC +
Preference number: 6 (lower is better)
Translates to: CVPAISKPAHHL*PWQTRLGHDGV
Trigger: GACTCCATCATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGGTTTGGAGATAGCAGGTACGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp GGCCAGTGTAGAGCCATCAGTACTGCTGGGGTTCTGTaGTGCCTCACTGCTGGCAGCAGATGCTTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GQCRAISTAGVL*CLTAGSRCFWG
Trigger: CCCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGTACTGATGGCTCTACACTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp CATCAGTACTGCTGGGGTTCTGTGCTGCCTCACTGCTaGCAGCAGATGCTTCTGGGGGCAGATCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: HQYCWGSVLPHC*QQMLLGADPAG
Trigger: CCCAGCAGGATCTGCCCCCAGAAGCATCTGCTGCCAGCAGTGAGGCAGCACAGAACCCCAGCAGTACTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp TGGGAGGTTATGCTGGGGCAGGCCGTGAGGAGCGACTaGGCCGCATTGACCACCTTCACAGCTGACGTTGTA +
Preference number: 6 (lower is better)
Translates to: WEVMLGQAVRSD*AALTTFTADVV
Trigger: TACAACGTCAGCTGTGAAGGTGGTCAATGCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCATAACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp CCTGCTATCTCCAAACCAGCGCACCACCTCTGGCCGTaGCAGACCCGTCTGGGCCATGATGGAGTCATAGTC +
Preference number: 6 (lower is better)
Translates to: PAISKPAHHLWP*QTRLGHDGVIV
Trigger: GACTATGACTCCATCATGGCCCAGACGGGTCTGCCACGGCCAGAGGTGGTGCGCTGGTTTGGAGATAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp AGGGTCCCAAGATTCAGGGTGCTACTGTACCCCGAGTaGTTCGAGTCCTGGCTCTGCCGCCTTCACTGGTCG +
Preference number: 6 (lower is better)
Translates to: RVPRFRVLLYPE*FESWLCRLHWS
Trigger: CGACCAGTGAAGGCGGCAGAGCCAGGACTCGAACCACTCGGGGTACAGTAGCACCCTGAATCTTGGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS GCA 72 bp CAGCACTGGGCTCACCCGCTAGGTCAGGAGTGCTGGTaGTCTCAGGGATGCTCTGCTCCACAACCACATGAT +
Preference number: 6 (lower is better)
Translates to: QHWAHPLGQECW*SQGCSAPQPHD
Trigger: ATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTGAGCCCAGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp CTTCAGCACTGGGCTCACCCGCTAGGTCAGGAGTGCTaGTGCTCTCAGGGATGCTCTGCTCCACAACCACAT +
Preference number: 6 (lower is better)
Translates to: LQHWAHPLGQEC*CSQGCSAPQPH
Trigger: ATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTGAGCCCAGTGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp GAGGGAGAGGAACTGTGCTATGCCAGCTGGCAAAACTaGCACTGTTCCTATCAGGGGCCCGTTGGCGGCATG +
Preference number: 6 (lower is better)
Translates to: EGEELCYASWQN*HCSYQGPVGGM
Trigger: CATGCCGCCAACGGGCCCCTGATAGGAACAGTGCCAGTTTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TGGACATGGTGTTGGGCATGCACTGGGGGCTGCTGCTaGAGGGAGAGGAACTGTGCTATGCCAGCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: WTWCWACTGGCC*RERNCAMPAGK
Trigger: TTTGCCAGCTGGCATAGCACAGTTCCTCTCCCTCCAGCAGCAGCCCCCAGTGCATGCCCAACACCATGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TCCGAGGACCTGGGGCCCACGTGTAGTGTTTTCGCGTaGGCAGACAAGGGTCCCAAGATTCAGGGTGCTACT +
Preference number: 6 (lower is better)
Translates to: SEDLGPTCSVFA*ADKGPKIQGAT
Trigger: AGTAGCACCCTGAATCTTGGGACCCTTGTCTGCCCACGCGAAAACACTACACGTGGGCCCCAGGTCCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS CAA 90 bp TCCTTCAGGCAAGGTCTCAGCGGGCTGGGCCTCCATGCTGGCATCTaGCAACACCACAGTCTTCACTGGGATCATGCATGGTGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: SFRQGLSGLGLHAGI*QHHSLHWDHAWCGG
Trigger: TCCACCACACCATGCATGATCCCAGTGAAGACTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000419740.6
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CAA 90 bp GCCACGGCTCTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTGCTaGACCTGCTGGGAGCTCATCTGGGTCTTGTCACAGAGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: ATALVSSPIFSANHC*TCWELIWVLSQRFC
Trigger: GCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAGAGCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp TTGGCCACGTTCCACACAAAGCTGGCTTCCCCGGAGTaGCATGTGGCATTGTGCAAGGAAAGCCCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LATFHTKLASPE*HVALCKESPSG
Trigger: CCCTGAGGGGCTTTCCTTGCACAATGCCACATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACGTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS TCA 72 bp AATAGTCCTGCAGGAGCTCCCGGTTGCCAGGGGCAATaGCCAGTAGCCCTGGTGGGAAGTTGCCTCGCTTAT +
Preference number: 6 (lower is better)
Translates to: NSPAGAPGCQGQ*PVALVGSCLAY
Trigger: ATAAGCGAGGCAACTTCCCACCAGGGCTACTGGTCATTGCCCCTGGCAACCGGGAGCTCCTGCAGGACTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp CACCCGCTAGGTCAGGAGTGCTGGTGCTCTCAGGGATaGTCTGCTCCACAACCACATGATTGTCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: HPLGQECWCSQG*SAPQPHDCLAW
Trigger: CCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAGCACTCCTGACCTAGCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 72 bp TTTGAACACACAGTGTTAATGGGTGCCACACCTGGCTaGTTGGGGACGGATGTCACCGTGAGGGGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: FEHTVLMGATPG*LGTDVTVRGRG
Trigger: CCCTCTCCCCCTCACGGTGACATCCGTCCCCAAGCAGCCAGGTGTGGCACCCATTAACACTGTGTGTTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp TTTCGCGTGGGCAGACAAGGGTCCCAAGATTCAGGGTaGTACTGTACCCCGAGTGGTTCGAGTCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: FRVGRQGSQDSG*YCTPSGSSPGS
Trigger: AGAGCCAGGACTCGAACCACTCGGGGTACAGTAGCACCCTGAATCTTGGGACCCTTGTCTGCCCACGCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS CCA 72 bp CTTCAGGCAAGGTCTCAGCGGGCTGGGCCTCCATGCTaGCATCTTGCAACACCACAGTCTTCACTGGGATCA +
Preference number: 6 (lower is better)
Translates to: LQARSQRAGPPC*HLATPQSSLGS
Trigger: TGATCCCAGTGAAGACTGTGGTGTTGCAAGATGCCAGCATGGAGGCCCAGCCCGCTGAGACCTTGCCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000419740.6
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp CCCTATTCAATACGCCACTCAGGGAATCCGAGGACCTaGGGCCCACGTGTAGTGTTTTCGCGTGGGCAGACA +
Preference number: 6 (lower is better)
Translates to: PYSIRHSGNPRT*GPRVVFSRGQT
Trigger: TGTCTGCCCACGCGAAAACACTACACGTGGGCCCCAGGTCCTCGGATTCCCTGAGTGGCGTATTGAATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558993.1
CDS TCA 72 bp CTGAATAGGTGTCACCCATCCCTTTGTGAACTGCTGTaGGCTCACCAGTACCAGGGCCCTGGTCCTCACTGC +
Preference number: 6 (lower is better)
Translates to: LNRCHPSLCELL*AHQYQGPGPHC
Trigger: GCAGTGAGGACCAGGGCCCTGGTACTGGTGAGCTCACAGCAGTTCACAAAGGGATGGGTGACACCTATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp GACGGATGTCACCGTGAGGGGGAGAGGGGAACTTGTTaGTTGCAACCCATTGGCCATCAATGGCTGAGTGAC +
Preference number: 6 (lower is better)
Translates to: DGCHREGERGTC*LQPIGHQWLSD
Trigger: GTCACTCAGCCATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCTCTCCCCCTCACGGTGACATCCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp CAGAAGGGTGGGTTGCTAGTGTGGCTGTTGTCGGAATaGAGGTTACCTCAGGGACCTTGGACGATGGGGAGA +
Preference number: 6 (lower is better)
Translates to: QKGGLLVWLLSE*RLPQGPWTMGR
Trigger: TCTCCCCATCGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp GGATGCTCTGCTCCACAACCACATGATTGTCTGGCTTaGCCACGTTCCACACAAAGCTGGCTTCCCCGGAGT +
Preference number: 6 (lower is better)
Translates to: GCSAPQPHDCLA*PRSTQSWLPRS
Trigger: ACTCCGGGGAAGCCAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp CTCAGGGATGCTCTGCTCCACAACCACATGATTGTCTaGCTTGGCCACGTTCCACACAAAGCTGGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: LRDALLHNHMIV*LGHVPHKAGFP
Trigger: GGGGAAGCCAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp GCCTGGCTGACTGGAACTGCCCCATTGATGAAGGAATaGTCCCCCTCTCTCACCTCCATTTCTCCAGTCGAC +
Preference number: 6 (lower is better)
Translates to: AWLTGTAPLMKE*SPSLTSISPVD
Trigger: GTCGACTGGAGAAATGGAGGTGAGAGAGGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TGGCTGTTGTCGGAATGCAGGTTACCTCAGGGACCTTaGACGATGGGGAGAAGGACACCTCTGGCACAGAGT +
Preference number: 6 (lower is better)
Translates to: WLLSECRLPQGP*TMGRRTPLAQS
Trigger: ACTCTGTGCCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp GTCGTTTGGCAGAAGGGTGGGTTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCTCAGGGACCTTGGACG +
Preference number: 6 (lower is better)
Translates to: VVWQKGGLLVWL*SECRLPQGPWT
Trigger: CGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp CTCTCCAGGGCTCTGAGCTGCTCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAGTCAGGAGTCTGGTGC +
Preference number: 6 (lower is better)
Translates to: LSRALSCSGALS*YLVGVKSGVWC
Trigger: GCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp AGCTCACTTTGCCTGGGAGCTGCTCTGCCAGTTTGTTaGACTCATCATCCTCAGGGTCACAGGCACCCAGCC +
Preference number: 6 (lower is better)
Translates to: SSLCLGAALPVC*THHPQGHRHPA
Trigger: GGCTGGGTGCCTGTGACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp CAAGCATCTCTAAAAGGTCACATGTTGCTTCTGCAGTaGCATTTCAGTCCTGGCAGCGGCGGCGGTGGCGGC +
Preference number: 6 (lower is better)
Translates to: QASLKGHMLLLQ*HFSPGSGGGGG
Trigger: GCCGCCACCGCCGCCGCTGCCAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559234.5
ENST00000559296.1
ENST00000683867.1
CDS CAA 90 bp GCCAAGATTGTCGTTTGGCAGAAGGGTGGGTTGCTAGTGTGGCTGTaGTCGGAATGCAGGTTACCTCAGGGACCTTGGACGATGGGGAGA +
Preference number: 6 (lower is better)
Translates to: AKIVVWQKGGLLVWL*SECRLPQGPWTMGR
Trigger: TCTCCCCATCGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp GCAGTCTTTTTGCAGCTCACTTTGCCTGGGAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCAGGGTCACAGGCACCCAGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: AVFLQLTLPGSCSAS*FDSSSSGSQAPSPG
Trigger: TCCAGGGCTGGGTGCCTGTGACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAAGACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp CTGGTGCTCTCAGGGATGCTCTGCTCCACAACCACATaGTTGTCTGGCTTGGCCACGTTCCACACAAAGCTG +
Preference number: 6 (lower is better)
Translates to: LVLSGMLCSTTT*LSGLATFHTKL
Trigger: CAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATGTGGTTGTGGAGCAGAGCATCCCTGAGAGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS TCA 72 bp GAACTTGTTGCTTGCAACCCATTGGCCATCAATGGCTaGGTGACCAGAAGTCCCCCTCCTGTACCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: ELVACNPLAING*VTRSPPPVPSG
Trigger: GCCAGAGGGTACAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAATGGGTTGCAAGCAACAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp TTTTGCAGAGCTGGCAGATGCCTGGCTGACTGGAACTaGCCCATTGATGAAGGAATGGTCCCCCTCTCTCAC +
Preference number: 6 (lower is better)
Translates to: FCRAGRCLADWN*PIDEGMVPLSH
Trigger: GTGAGAGAGGGGGACCATTCCTTCATCAATGGGGCAGTTCCAGTCAGCCAGGCATCTGCCAGCTCTGCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp GCTCTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTaGTTGACCTGCTGGGAGCTCATCTGGGTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: ALVSSPIFSANH*LTCWELIWVLS
Trigger: TGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp CATGATTGTCTGGCTTGGCCACGTTCCACACAAAGCTaGCTTCCCCGGAGTGACATGTGGCATTGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: HDCLAWPRSTQS*LPRSDMWHCAR
Trigger: CCTTGCACAATGCCACATGTCACTCCGGGGAAGCCAGCTTTGTGTGGAACGTGGCCAAGCCAGACAATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CCA 72 bp AGGGGAACTTGTTGCTTGCAACCCATTGGCCATCAATaGCTGAGTGACCAGAAGTCCCCCTCCTGTACCCTC +
Preference number: 6 (lower is better)
Translates to: RGTCCLQPIGHQ*LSDQKSPSCTL
Trigger: GAGGGTACAGGAGGGGGACTTCTGGTCACTCAGCCATTGATGGCCAATGGGTTGCAAGCAACAAGTTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp TTGCAGCTCACTTTGCCTGGGAGCTGCTCTGCCAGTTaGTTTGACTCATCATCCTCAGGGTCACAGGCACCC +
Preference number: 6 (lower is better)
Translates to: LQLTLPGSCSAS*FDSSSSGSQAP
Trigger: GGGTGCCTGTGACCCTGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp CTGGTCTCCTCCCCCATTTTCTCAGCAAACCACTGCTaGACCTGCTGGGAGCTCATCTGGGTCTTGTCACAG +
Preference number: 6 (lower is better)
Translates to: LVSSPIFSANHC*TCWELIWVLSQ
Trigger: CTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp AGTCAGGAGTCTGGTGCCAAGATTGTCGTTTGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCGGAATGCAGGTTACCTCAGGGACCT +
Preference number: 6 (lower is better)
Translates to: SQESGAKIVVWQKGG*LVWLLSECRLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGACTCCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp CTGCTCTCCAGGGCTCTGAGCTGCTCAGGGGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGAGTCTGGTGCCAAGATTGTCGTTTG +
Preference number: 6 (lower is better)
Translates to: LLSRALSCSGALSLY*VGVKSGVWCQDCRL
Trigger: CAAACGACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp TGGTCTCCTCCCCCATTTTCTCAGCAAACCACTGCTTaGCCTGCTGGGAGCTCATCTGGGTCTTGTCACAGA +
Preference number: 6 (lower is better)
Translates to: WSPPPFSQQTTA*PAGSSSGSCHR
Trigger: TCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAAAATGGGGGAGGAGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp ACGGGGCTCCCACGACTCACTGTTCTCAGACACCTCTaGATAGGTGTCACCCATCCCTTTGTGAACTGCTGT +
Preference number: 6 (lower is better)
Translates to: TGLPRLTVLRHL*IGVTHPFVNCC
Trigger: ACAGCAGTTCACAAAGGGATGGGTGACACCTATTCAGAGGTGTCTGAGAACAGTGAGTCGTGGGAGCCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp AGGCCCGTCACTTTTGTGAGATGTTCAACTTCGCTCTaGCCTGGGAACTGGTTCCGACAGAAGCTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: RPVTFVRCSTSL*PGNWFRQKLPF
Trigger: GAAAGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACATCTCACAAAAGTGACGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp AGTGCCGCTGCTGGGCAGTCTTTTTGCAGCTCACTTTaGCTGGGAGCTGCTCTGCCAGTTTGTTTGACTCAT +
Preference number: 6 (lower is better)
Translates to: SAAAGQSFCSSL*LGAALPVCLTH
Trigger: ATGAGTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCAGCAGCGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TGTCGGAATGCAGGTTACCTCAGGGACCTTGGACGATaGGGAGAAGGACACCTCTGGCACAGAGTCAATGAT +
Preference number: 6 (lower is better)
Translates to: CRNAGYLRDLGR*GEGHLWHRVND
Trigger: ATCATTGACTCTGTGCCAGAGGTGTCCTTCTCCCCATCGTCCAAGGTCCCTGAGGTAACCTGCATTCCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp GGAGTCTGGTGCCAAGATTGTCGTTTGGCAGAAGGGTaGGTTGCTAGTGTGGCTGTTGTCGGAATGCAGGTT +
Preference number: 6 (lower is better)
Translates to: GVWCQDCRLAEG*VASVAVVGMQV
Trigger: AACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TCAGCAAACCACTGCTTGACCTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTCTGCAGGTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: SANHCLTCWELI*VLSQRFCRSSS
Trigger: TGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp GGTGTGAAGTCAGGAGTCTGGTGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCTAGTGTGGCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: GVKSGVWCQDCR*AEGWVASVAVV
Trigger: GACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGACTCCTGACTTCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp AGGGCTCTGAGCTGCTCAGGGGCTCTCTCCTTGTATTaGGTTGGTGTGAAGTCAGGAGTCTGGTGCCAAGAT +
Preference number: 6 (lower is better)
Translates to: RALSCSGALSLY*VGVKSGVWCQD
Trigger: ATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp TCACAGGCACCCAGCCCTGGAATCTCGTTCCTGCCATaGGCTTCAGTGACCCTCAGGTTCTTCAGGTTGATT +
Preference number: 6 (lower is better)
Translates to: SQAPSPGISFLP*ASVTLRFFRLI
Trigger: AATCAACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGATTCCAGGGCTGGGTGCCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp AACCACTGCTTGACCTGCTGGGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGGTCCTCTTCATACAGC +
Preference number: 6 (lower is better)
Translates to: NHCLTCWELIWV*SQRFCRSSSYS
Trigger: GCTGTATGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp GCAAAACTGCTCTCCAGGGCTCTGAGCTGCTCAGGGGCTCTCTCCTaGTATTTGGTTGGTGTGAAGTCAGGAGTCTGGTGCCAAGATTGT +
Preference number: 6 (lower is better)
Translates to: AKLLSRALSCSGALS*YLVGVKSGVWCQDC
Trigger: ACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGAGCAGCTCAGAGCCCTGGAGAGCAGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp CCCTGGTGGGAAGTTGCCTCGCTTATAGTCTTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTACCTGCTATCTCCAAACCAGCGCAC +
Preference number: 6 (lower is better)
Translates to: PWWEVASLIVFVPFE*AVLQCVPAISKPAH
Trigger: GTGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAACTCAAATGGTACGAAGACTATAAGCGAGGCAACTTCCCACCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp GCTGCTCAGGGGCTCTCTCCTTGTATTTGGTTGGTGTaGAGTCAGGAGTCTGGTGCCAAGATTGTCGTTTGG +
Preference number: 6 (lower is better)
Translates to: AAQGLSPCIWLV*SQESGAKIVVW
Trigger: CCAAACGACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp TGGGCAGTCTTTTTGCAGCTCACTTTGCCTGGGAGCTaGTCTGCCAGTTTGTTTGACTCATCATCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: WAVFLQLTLPGS*SASLFDSSSSG
Trigger: CCCTGAGGATGATGAGTCAAACAAACTGGCAGAGCAGCTCCCAGGCAAAGTGAGCTGCAAAAAGACTGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TTTGTGAGATGTTCAACTTCGCTCTGCCCTGGGAACTaGTTCCGACAGAAGCTCCCTTTCAGAGCTGACAGC +
Preference number: 6 (lower is better)
Translates to: FVRCSTSLCPGN*FRQKLPFRADS
Trigger: GCTGTCAGCTCTGAAAGGGAGCTTCTGTCGGAACCAGTTCCCAGGGCAGAGCGAAGTTGAACATCTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp GGTATCATCGCTCTGGAGCCCTTCAAGTTCCGGCAGTaGTATCTACGATCACTGAACCATTTCCGCACCTCT +
Preference number: 6 (lower is better)
Translates to: GIIALEPFKFRQ*YLRSLNHFRTS
Trigger: AGAGGTGCGGAAATGGTTCAGTGATCGTAGATACCACTGCCGGAACTTGAAGGGCTCCAGAGCGATGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp AAGATTGTCGTTTGGCAGAAGGGTGGGTTGCTAGTGTaGCTGTTGTCGGAATGCAGGTTACCTCAGGGACCT +
Preference number: 6 (lower is better)
Translates to: KIVVWQKGGLLV*LLSECRLPQGP
Trigger: AGGTCCCTGAGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TCTGAGCTGCTCAGGGGCTCTCTCCTTGTATTTGGTTaGTGTGAAGTCAGGAGTCTGGTGCCAAGATTGTCG +
Preference number: 6 (lower is better)
Translates to: SELLRGSLLVFG*CEVRSLVPRLS
Trigger: CGACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAGAGCCCCTGAGCAGCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp TCTGGTGCCAAGATTGTCGTTTGGCAGAAGGGTGGGTaGCTAGTGTGGCTGTTGTCGGAATGCAGGTTACCT +
Preference number: 6 (lower is better)
Translates to: SGAKIVVWQKGG*LVWLLSECRLP
Trigger: AGGTAACCTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp TTCATGAGATTTCTTATTTTTGTAGATGCTAGCATCAAGGAAGGCTaGGGAGGTTATGCTGGGGCAGGCCGTGAGGAGCGACTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: FMRFLIFVDASIKEG*GGYAGAGREERLGR
Trigger: GCGGCCCAGTCGCTCCTCACGGCCTGCCCCAGCATAACCTCCCAAGCCTTCCTTGATGCTAGCATCTACAAAAATAAGAAATCTCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp TCTTCACTTTATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCCTGGCAGCGGCGGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: SSLYAVPQASLKGHM*LLQLHFSPGSGGGG
Trigger: GCCACCGCCGCCGCTGCCAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATAAAGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559234.5
ENST00000559296.1
ENST00000683867.1
CDS CAA 90 bp TATTTGGTTGGTGTGAAGTCAGGAGTCTGGTGCCAAGATTGTCGTTaGGCAGAAGGGTGGGTTGCTAGTGTGGCTGTTGTCGGAATGCAG +
Preference number: 6 (lower is better)
Translates to: YLVGVKSGVWCQDCR*AEGWVASVAVVGMQ
Trigger: CTGCATTCCGACAACAGCCACACTAGCAACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp TCAGTGACCCTCAGGTTCTTCAGGTTGATTTTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGGCTGCTGGGCATTTCCAGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SVTLRFFRLILMGLT*RSAKIWLLGISREP
Trigger: TGGCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAGGGTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp TTCTCAGCAAACCACTGCTTGACCTGCTGGGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGGTCCTCTTCATACAGCATCTTGTGT +
Preference number: 6 (lower is better)
Translates to: FSANHCLTCWELIWV*SQRFCRSSSYSILC
Trigger: ACACAAGATGCTGTATGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGGTCAAGCAGTGGTTTGCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp GACACCTCTGGCACAGAGTCAATGATGATGGAACTGTaGTCTCCAGGTATCATCGCTCTGGAGCCCTTCAAG +
Preference number: 6 (lower is better)
Translates to: DTSGTESMMMEL*SPGIIALEPFK
Trigger: CTTGAAGGGCTCCAGAGCGATGATACCTGGAGATCACAGTTCCATCATCATTGACTCTGTGCCAGAGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp CTTCAGGTTGATTTTAATGGGGCTGACTTTGCGCTCTaGCAAGATATGGCTGCTGGGCATTTCCAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: LQVDFNGADFAL*QDMAAGHFQRA
Trigger: GGCTCTCTGGAAATGCCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAAAATCAACCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp ATAGTCTTCGTACCATTTGAGTTGGCCGTTCTTCAGTaGGTACCTGCTATCTCCAAACCAGCGCACCACCTC +
Preference number: 6 (lower is better)
Translates to: IVFVPFELAVLQ*VPAISKPAHHL
Trigger: GAGGTGGTGCGCTGGTTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAACTCAAATGGTACGAAGACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp TGCTGGGAGCTCATCTGGGTCTTGTCACAGAGGTTCTaGAGGTCCTCTTCATACAGCATCTTGTGTGTCATG +
Preference number: 6 (lower is better)
Translates to: CWELIWVLSQRF*RSSSYSILCVM
Trigger: CATGACACACAAGATGCTGTATGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000559436.2
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp CAGGAAGCTGTTAGAGTCCATGGCTGCATTGTACGTTaGAATGCTGCTCAGGGGGATCATCACTTTGGGAAG +
Preference number: 6 (lower is better)
Translates to: QEAVRVHGCIVR*NAAQGDHHFGK
Trigger: CTTCCCAAAGTGATGATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCATGGACTCTAACAGCTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp ACTTGGTCACCACAGTCAAATAGCAGAGCTCGGCTTTaGTGGGGTAGGGGAACTTGTGGAAGGAGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: TWSPQSNSRARL*WGRGTCGRSSS
Trigger: TGAAGAACTCCTTCCACAAGTTCCCCTACCCCACCAAAGCCGAGCTCTGCTATTTGACTGTGGTGACCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp CTGCCATTGGCTTCAGTGACCCTCAGGTTCTTCAGGTaGATTTTAATGGGGCTGACTTTGCGCTCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: LPLASVTLRFFR*ILMGLTLRSAK
Trigger: CTTGGCAGAGCGCAAAGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp TTGTGGAAGGAGTTCTTCAGGAAGCTGTTAGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTCAGGGGGATCATCACTTTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: LWKEFFRKLLESMAA*YVGMLLRGIITLGR
Trigger: CCTTCCCAAAGTGATGATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCATGGACTCTAACAGCTTCCTGAAGAACTCCTTCCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp ATCTCGTTCCTGCCATTGGCTTCAGTGACCCTCAGGTTCTTCAGGTaGATTTTAATGGGGCTGACTTTGCGCTCTGCCAAGATATGGCTG +
Preference number: 6 (lower is better)
Translates to: ISFLPLASVTLRFFR*ILMGLTLRSAKIWL
Trigger: CAGCCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAGGGTCACTGAAGCCAATGGCAGGAACGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp GTGGGAAGTTGCCTCGCTTATAGTCTTCGTACCATTTaGGTTGGCCGTTCTTCAGTGCGTACCTGCTATCTC +
Preference number: 6 (lower is better)
Translates to: VGSCLAYSLRTI*VGRSSVRTCYL
Trigger: GAGATAGCAGGTACGCACTGAAGAACGGCCAACTCAAATGGTACGAAGACTATAAGCGAGGCAACTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS GCA 72 bp GAAGGAGTTCTTCAGGAAGCTGTTAGAGTCCATGGCTaGATTGTACGTTGGAATGCTGCTCAGGGGGATCAT +
Preference number: 6 (lower is better)
Translates to: EGVLQEAVRVHG*IVRWNAAQGDH
Trigger: ATGATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCATGGACTCTAACAGCTTCCTGAAGAACTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp CTCTCCTTGTATTTGGTTGGTGTGAAGTCAGGAGTCTaGTGCCAAGATTGTCGTTTGGCAGAAGGGTGGGTT +
Preference number: 6 (lower is better)
Translates to: LSLYLVGVKSGV*CQDCRLAEGWV
Trigger: AACCCACCCTTCTGCCAAACGACAATCTTGGCACCAGACTCCTGACTTCACACCAACCAAATACAAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp GAGTTCTTCAGGAAGCTGTTAGAGTCCATGGCTGCATaGTACGTTGGAATGCTGCTCAGGGGGATCATCACT +
Preference number: 6 (lower is better)
Translates to: EFFRKLLESMAA*YVGMLLRGIIT
Trigger: AGTGATGATCCCCCTGAGCAGCATTCCAACGTACAATGCAGCCATGGACTCTAACAGCTTCCTGAAGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp TTTCTTATTTTTGTAGATGCTAGCATCAAGGAAGGCTaGGGAGGTTATGCTGGGGCAGGCCGTGAGGAGCGA +
Preference number: 6 (lower is better)
Translates to: FLIFVDASIKEG*GGYAGAGREER
Trigger: TCGCTCCTCACGGCCTGCCCCAGCATAACCTCCCAAGCCTTCCTTGATGCTAGCATCTACAAAAATAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp CTCAGGTTCTTCAGGTTGATTTTAATGGGGCTGACTTaGCGCTCTGCCAAGATATGGCTGCTGGGCATTTCC +
Preference number: 6 (lower is better)
Translates to: LRFFRLILMGLT*RSAKIWLLGIS
Trigger: GGAAATGCCCAGCAGCCATATCTTGGCAGAGCGCAAAGTCAGCCCCATTAAAATCAACCTGAAGAACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp AATTCAGTCTGTTTCTGCTGGGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGGTCCTCTTCATACAGC +
Preference number: 6 (lower is better)
Translates to: NSVCFCWELIWV*SQRFCRSSSYS
Trigger: GCTGTATGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGAAACAGACTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS CAA 72 bp TATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCCTGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: YAVPQASLKGHM*LLQLHFSPGSG
Trigger: GCCGCTGCCAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559234.5
ENST00000559296.1
ENST00000683867.1
CDS CAA 72 bp AGATCAAATTCAGTCTGCTGGGAGCTCATCTGGGTCTaGTCACAGAGGTTCTGCAGGTCCTCTTCATACAGC +
Preference number: 6 (lower is better)
Translates to: RSNSVCWELIWV*SQRFCRSSSYS
Trigger: GCTGTATGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGACTGAATTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559436.2
CDS CAA 90 bp ATAGAGCCCTTCCAACACCTGTTCCCCAATCTCCAAGGCAGGGTCTaGGTCCATGGGTTAGAATCACTGACTGGGCTTAAACAATCAAGA +
Preference number: 6 (lower is better)
Translates to: IEPFQHLFPNLQGRV*VHGLESLTGLKQSR
Trigger: TCTTGATTGTTTAAGCCCAGTCAGTGATTCTAACCCATGGACCAAGACCCTGCCTTGGAGATTGGGGAACAGGTGTTGGAAGGGCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000436099.6
ENST00000560361.5
ENST00000561291.5
CDS CCA 72 bp CCTTTGGGCTGTGAACCAGATCTTGAGCTGTTCTTCTaGATACTTGGTCACCACAGTCAAATAGCAGAGCTC +
Preference number: 6 (lower is better)
Translates to: PLGCEPDLELFF*ILGHHSQIAEL
Trigger: GAGCTCTGCTATTTGACTGTGGTGACCAAGTATCCAGAAGAACAGCTCAAGATCTGGTTCACAGCCCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp AGATCAAATTCAGTCTGTTTCTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTCTGCAGGTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: RSNSVCFCWELI*VLSQRFCRSSS
Trigger: TGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGAAACAGACTGAATTTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS CAA 90 bp ATAGAGCCCTTCCAACACCTGTTCCCCAATCTCCAAGGCAGGGTCTaGGTCCATGGGTTAGAATCACTTTGTAGCTTTGGGCAAAATTCT +
Preference number: 6 (lower is better)
Translates to: IEPFQHLFPNLQGRV*VHGLESLCSFGQNS
Trigger: AGAATTTTGCCCAAAGCTACAAAGTGATTCTAACCCATGGACCAAGACCCTGCCTTGGAGATTGGGGAACAGGTGTTGGAAGGGCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560364.5
CDS CAA 90 bp TTCCGTCTCTCTGAAAACCAGCTATCAATTTCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGGTCCAGTTCCTCATCAAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: FRLSENQLSISRRVI*VSLLRRSSSSSRGR
Trigger: TCTTCCTCTTGATGAGGAACTGGACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGAAATTGATAGCTGGTTTTCAGAGAGACGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS TCA 72 bp GCGACGAGTGGGGTATTTAGAACCGTAATTGTGGGCTaGGGCACAGACTGGATGACTGTATTGAACATCTTT +
Preference number: 6 (lower is better)
Translates to: ATSGVFRTVIVG*GTDWMTVLNIF
Trigger: AAAGATGTTCAATACAGTCATCCAGTCTGTGCCTCAGCCCACAATTACGGTTCTAAATACCCCACTCGTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CCA 72 bp TTAATCAGATCAAATTCAGTCTGCTGGGAGCTCATCTaGGTCTTGTCACAGAGGTTCTGCAGGTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LIRSNSVCWELI*VLSQRFCRSSS
Trigger: TGAAGAGGACCTGCAGAACCTCTGTGACAAGACCCAGATGAGCTCCCAGCAGACTGAATTTGATCTGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559436.2
CDS CAA 72 bp GAAGTTGCCTCGCTTATAGTCTTCGTACCATTTGAGTaGGCCGTTCTTCAGTGCGTACCTGCTATCTCCAAA +
Preference number: 6 (lower is better)
Translates to: EVASLIVFVPFE*AVLQCVPAISK
Trigger: TTTGGAGATAGCAGGTACGCACTGAAGAACGGCCAACTCAAATGGTACGAAGACTATAAGCGAGGCAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 90 bp CAGAAACAAACATTCCCTGTTTCCTATGGAAGGGATGAGCATCTATaGTCCAGCACTGGTTTAGATCCTGGGGATAAAGTTCTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: QKQTFPVSYGRDEHL*SSTGLDPGDKVLAL
Trigger: GAGGGCAAGAACTTTATCCCCAGGATCTAAACCAGTGCTGGACAATAGATGCTCATCCCTTCCATAGGAAACAGGGAATGTTTGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560361.5
ENST00000561291.5
CDS CAA 72 bp TCTGAAAACCAGCTATCAATTTCTCGTCGGGTCATTTaGGTTTCACTTCTCAGGCGGTCCAGTTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: SENQLSISRRVI*VSLLRRSSSSS
Trigger: TGATGAGGAACTGGACCGCCTGAGAAGTGAAACCAAAATGACCCGACGAGAAATTGATAGCTGGTTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp TATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCCTCCTTGGGAT +
Preference number: 6 (lower is better)
Translates to: YAVPQASLKGHM*LLQLHFSPPWD
Trigger: ATCCCAAGGAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS TCA 72 bp ACAGAAACAAACATTCCCTGTTTCCTATGGAAGGGATaGGCATCTATTGTCCAGCACTGGTTTAGATCCTGG +
Preference number: 6 (lower is better)
Translates to: TETNIPCFLWKG*ASIVQHWFRSW
Trigger: CCAGGATCTAAACCAGTGCTGGACAATAGATGCTCATCCCTTCCATAGGAAACAGGGAATGTTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560361.5
ENST00000561291.5
CDS CAA 72 bp TATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCAGATGTGTTGC +
Preference number: 6 (lower is better)
Translates to: YAVPQASLKGHM*LLQLHFSQMCC
Trigger: GCAACACATCTGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419740.6
ENST00000560759.5
CDS CAA 90 bp TCTTCACTTTATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCCTCCTTGGGATCATCTGTTT +
Preference number: 6 (lower is better)
Translates to: SSLYAVPQASLKGHM*LLQLHFSPPWDHLF
Trigger: AAACAGATGATCCCAAGGAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATAAAGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS TCA 72 bp TGGGAACTGGTTCCGACAGAAGCTCCCTTTCAGAGCTaGCAGCTGTTCATGAGATTTCTTATTTTTGTAGAT +
Preference number: 6 (lower is better)
Translates to: WELVPTEAPFQS*QLFMRFLIFVD
Trigger: ATCTACAAAAATAAGAAATCTCATGAACAGCTGTCAGCTCTGAAAGGGAGCTTCTGTCGGAACCAGTTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000309060.7
ENST00000421422.1
ENST00000432768.6
ENST00000544979.6
ENST00000559234.5
ENST00000560361.5
ENST00000683867.1
CDS CAA 72 bp CAAGCATCTCTAAAAGGTCACATGTTGCTTCTGCAGTaGCATTTCAGTCCTAAGCATATAGTGCAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: QASLKGHMLLLQ*HFSPKHIVQSP
Trigger: TGGAGACTGCACTATATGCTTAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000485686.2
ENST00000487057.5
ENST00000559028.5
ENST00000560361.5
ENST00000560364.5
CDS CAA 72 bp CAAGCATCTCTAAAAGGTCACATGTTGCTTCTGCAGTaGCATTTCAGTCCTCCTTGGGATCATCTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: QASLKGHMLLLQ*HFSPPWDHLFS
Trigger: TGAAAACAGATGATCCCAAGGAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544979.6
CDS CAA 72 bp TATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCAAAATCACCAG +
Preference number: 6 (lower is better)
Translates to: YAVPQASLKGHM*LLQLHFSQNHQ
Trigger: CTGGTGATTTTGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560456.5
CDS CAA 90 bp TCTTCACTTTATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCCTAAGCATATAGTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SSLYAVPQASLKGHM*LLQLHFSPKHIVQS
Trigger: AGACTGCACTATATGCTTAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATAAAGTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000485686.2
ENST00000487057.5
ENST00000559028.5
ENST00000560361.5
ENST00000560364.5
CDS TCA 72 bp ATAAGGGGCCTAACAATACAAGTTCCAGCTTCTCGATaGGGGCCAAAGAAACAGTTTCTAAATGCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: IRGLTIQVPASR*GPKKQFLNAAF
Trigger: AAAAGCTGCATTTAGAAACTGTTTCTTTGGCCCTCATCGAGAAGCTGGAACTTGTATTGTTAGGCCCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000419740.6
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS GCA 72 bp CTGCATACAAAGGTTGGGTCTTTATTAAAGTCTGTGTaGTCTGAGTTCATATGTCCCACAAATTGGGTCATG +
Preference number: 6 (lower is better)
Translates to: LHTKVGSLLKSV*SEFICPTNWVM
Trigger: CATGACCCAATTTGTGGGACATATGAACTCAGAGCACACAGACTTTAATAAAGACCCAACCTTTGTATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1
CDS CAA 72 bp TATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCCTAAGCATATA +
Preference number: 6 (lower is better)
Translates to: YAVPQASLKGHM*LLQLHFSPKHI
Trigger: TATATGCTTAGGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000309060.7
ENST00000373261.5
ENST00000432768.6
ENST00000436099.6
ENST00000436440.6
ENST00000485686.2
ENST00000487057.5
ENST00000559028.5
ENST00000560361.5
ENST00000560364.5
CDS CAA 90 bp TCTTCACTTTATGCAGTCCCACAAGCATCTCTAAAAGGTCACATGTaGCTTCTGCAGTTGCATTTCAGTCAGATGTGTTGCTTTGTAACT +
Preference number: 6 (lower is better)
Translates to: SSLYAVPQASLKGHM*LLQLHFSQMCCFVT
Trigger: AGTTACAAAGCAACACATCTGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTGTGGGACTGCATAAAGTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419740.6
ENST00000560759.5
CDS CAA 72 bp CAGAAAGCAGGTTTTCCCTATTCAATCTTTGTAGCTTaGGGCAAAATTCTTAAGCTGTGTCTCAGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: QKAGFPYSIFVA*GKILKLCLSFL
Trigger: GAGGAAACTGAGACACAGCTTAAGAATTTTGCCCAAAGCTACAAAGATTGAATAGGGAAAACCTGCTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309060.7
CDS CAA 72 bp CAAGCATCTCTAAAAGGTCACATGTTGCTTCTGCAGTaGCATTTCAGTCAGATGTGTTGCTTTGTAACTTCA +
Preference number: 6 (lower is better)
Translates to: QASLKGHMLLLQ*HFSQMCCFVTS
Trigger: TGAAGTTACAAAGCAACACATCTGACTGAAATGCAACTGCAGAAGCAACATGTGACCTTTTAGAGATGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419740.6
ENST00000560759.5
CDS CCA 72 bp GCAGGGAGACAGCCAATCAAATTTATCTACAGTGGCTaGATGGTGATAAATGTTTTTCCTTACTTCATTGTT +
Preference number: 6 (lower is better)
Translates to: AGRQPIKFIYSG*MVINVFPYFIV
Trigger: AACAATGAAGTAAGGAAAAACATTTATCACCATCCAGCCACTGTAGATAAATTTGATTGGCTGTCTCCCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487057.5
CDS CCA 72 bp TCTGAGTTCATATGTCCCACAAATTGGGTCATGTCATaGGATCTGAAATCGCAGTATTTACAGGAATATAAA +
Preference number: 6 (lower is better)
Translates to: SEFICPTNWVMS*DLKSQYLQEYK
Trigger: TTTATATTCCTGTAAATACTGCGATTTCAGATCCCATGACATGACCCAATTTGTGGGACATATGAACTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000309060.7
ENST00000432768.6
ENST00000544979.6
ENST00000558993.1
ENST00000559234.5
ENST00000560361.5
ENST00000560364.5
ENST00000683867.1