RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZHX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000178764

Ensembl transcript IDs: ENST00000314393.6, ENST00000534247.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTCTaGGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTA +
Preference number: 1 (lower is better)
Translates to: FGTMNNSHRSSGRCV*ESLDFPHPPGTREL
Trigger: TAGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 90 bp CTTAAAGAAGTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTGGCTaGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGAT +
Preference number: 1 (lower is better)
Translates to: LKEVSHLLPSSPRAG*AQPGPRGRAVEKPD
Trigger: ATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 90 bp GCAGTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTaGGAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: AVVGLWHYEQFPPVL*EVRLRVAGLPAPSR
Trigger: CCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 90 bp CACCCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTaGCAAGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCT +
Preference number: 1 (lower is better)
Translates to: HPPGTRELSSSTWSH*QGWPMAGERPSLLS
Trigger: AGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 90 bp GGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTaGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACG +
Preference number: 1 (lower is better)
Translates to: GTRELSSSTWSHWQG*PMAGERPSLLSSKT
Trigger: CGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR GCA 90 bp CATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTaGTTAAAGAAGTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: HANRGGSLFCWYLER*LKKSATCYPVLPGL
Trigger: CAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 90 bp GAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCTaGATTTCAGCCCTTCCTGCCGAGAAATCTCCCAAATTTCAACCT +
Preference number: 1 (lower is better)
Translates to: EDLPSVTSLQVETGA*ISALPAEKSPKFQP
Trigger: AGGTTGAAATTTGGGAGATTTCTCGGCAGGAAGGGCTGAAATCCAGGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 90 bp GCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTaGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTCTG +
Preference number: 1 (lower is better)
Translates to: ANYVQGPIENAVVGL*HYEQFPPVLWEVRL
Trigger: CAGACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 90 bp CACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTaGTATTTAGAAAGGTGCTTAAAGAAGTCAGCCACCTGCTACCCA +
Preference number: 1 (lower is better)
Translates to: HNSTDHANRGGSLFC*YLERCLKKSATCYP
Trigger: TGGGTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR GCA 90 bp TGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTaGTGGTATTTAGAAAGGTGCTTAAAGAAGTCAGCCACCTGCTAC +
Preference number: 1 (lower is better)
Translates to: CHNSTDHANRGGSLF*WYLERCLKKSATCY
Trigger: GTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CAA 90 bp CAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTaGGCAGTTCAGAAAGCCTTGTGTGGGGCTAAGGCAGGGACCCCC +
Preference number: 2 (lower is better)
Translates to: QPGPRGRAVEKPDPL*AVQKALCGAKAGTP
Trigger: GGGGGTCCCTGCCTTAGCCCCACACAAGGCTTTCTGAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CCA 90 bp AGAAAGGTGCTTAAAGAAGTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTGGCAGTCACTGGCAAGGGTaGCCCATGGCTGGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: RKVLKEVSHLLPSSPRAGSHWQG*PMAGER
Trigger: TCTCTCCCCAGCCATGGGCCACCCTTGCCAGTGACT...GCCAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR TCA 90 bp AGAAAGGTGCTTAAAGAAGTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTGGCAAGAGGCCGAGCAGTTaGGAAGCCAGATCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: RKVLKEVSHLLPSSPRAGKRPSS*EARSPL
Trigger: AAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTT...GCCAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGGGCAAGGGTGGCCCATaGCTGGGGAGAGACCATCTC +
Preference number: 2 (lower is better)
Translates to: RGANYVQGPIENAVVGLWGKGGP*LGRDHL
Trigger: GAGATGGTCTCTCCCCAGCCATGGGCCACCCTTGCC...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CAA 90 bp AGGAATTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTaGAGACAGGGGCCTGGATTTCAGCCCTTCCTGCCGAGAAATCTC +
Preference number: 2 (lower is better)
Translates to: RNLIWKICRLSPLSK*RQGPGFQPFLPRNL
Trigger: GAGATTTCTCGGCAGGAAGGGCTGAAATCCAGGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR TCA 90 bp CAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGTTGTTGTTTTCTGGGAGGTGCGTCTaGGAGTCGCTGGACTTCCCG +
Preference number: 2 (lower is better)
Translates to: QSHSPLYPPDRKILLLLFSGRCV*ESLDFP
Trigger: CGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGA...AAACAACAACAATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR GCA 90 bp GGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATTTGATTTGGAAGATCTaGCGTCTGTCACCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: GTGRDCNQSSYCNTYTRYLIWKI*RLSPLS
Trigger: GGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAA...ATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CCA 90 bp CAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGTTGTTGTTTGCGTCTGAGAGTCGCTaGACTTCCCGCACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: QSHSPLYPPDRKILLLLFASESR*TSRTLQ
Trigger: CTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGC...AAACAACAACAATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CCA 90 bp AGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTTAAAGAAGTCAGCCAGCCAGATCCCCTCTTaGCAGTTCAGAAAGCCTTGT +
Preference number: 2 (lower is better)
Translates to: RGGSLFCWYLERCLKKSASQIPS*QFRKPC
Trigger: ACAAGGCTTTCTGAACTGCCAAGAGGGGATCTGGCT...GGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CCA 90 bp GGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGGGAGCCTCTTCTGCTaGTATTTAGAAAGGTGCTTA +
Preference number: 2 (lower is better)
Translates to: GTGRDCNQSSYCNTYTRYGSLFC*YLERCL
Trigger: TAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCC...ATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR GCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCGATTTCAGCCCTTCCTaGCGAGAAATCTCCCAAATT +
Preference number: 2 (lower is better)
Translates to: TDHANRGGSLFCWYLERCDFSPS*REISQI
Trigger: AATTTGGGAGATTTCTCGGCAGGAAGGGCTGAAATC...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR TCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATAGGACTTTGGCACTATaGACAATTCCCACCGGTCCT +
Preference number: 2 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYRTLAL*TIPTGP
Trigger: AGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCT...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CCA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAATCCACTTGGAGTCACTaGCAAGGGTGGCCCATGGCT +
Preference number: 2 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKSTWSH*QGWPMA
Trigger: AGCCATGGGCCACCCTTGCCAGTGACTCCAAGTGGA...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 72 bp GTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTGGCTaGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAG +
Preference number: 3 (lower is better)
Translates to: VSHLLPSSPRAG*AQPGPRGRAVE
Trigger: CTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR TCA 72 bp ATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTCTaGGAGTCGCTGGACTTCCCGCACCCTCCAGGCACA +
Preference number: 3 (lower is better)
Translates to: MNNSHRSSGRCV*ESLDFPHPPGT
Trigger: TGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGACCGGTGGGAATTGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR TCA 72 bp TGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTaGGAAGCCAGATCCCCTCTTGGCAGTTCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: WLGTAWPKRPSS*EARSPLGSSES
Trigger: GCTTTCTGAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 72 bp GGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTaGCAAGGGTGGCCCATGGCTGGGGAGAGACCATCT +
Preference number: 3 (lower is better)
Translates to: GTRELSSSTWSH*QGWPMAGERPS
Trigger: AGATGGTCTCTCCCCAGCCATGGGCCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 72 bp CCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCTaGATTTCAGCCCTTCCTGCCGAGAAATCTCCCAAA +
Preference number: 3 (lower is better)
Translates to: PSVTSLQVETGA*ISALPAEKSPK
Trigger: TTTGGGAGATTTCTCGGCAGGAAGGGCTGAAATCCAGGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 72 bp AACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAATaGGGGGCAGTGTGGGACGGGGAGGGATTGCAACCA +
Preference number: 3 (lower is better)
Translates to: NFLAFDLCGVLK*GAVWDGEGLQP
Trigger: TGGTTGCAATCCCTCCCCGTCCCACACTGCCCCCCATTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 72 bp GAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTaGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: ELSSSTWSHWQG*PMAGERPSLLS
Trigger: AGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR GCA 72 bp TGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTaGAACACGTACACCAGATATGTCTCTTGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: CGTGRDCNQSSY*NTYTRYVSWFS
Trigger: GGAAAACCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CCA 72 bp GTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTaGCACTATGAACAATTCCCACCGGTCCTCTGGGAG +
Preference number: 3 (lower is better)
Translates to: VQGPIENAVVGL*HYEQFPPVLWE
Trigger: CTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CAA 90 bp ACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTTTTCCTTCTCAAGAGGCCGAGCAGTaGAGAAGCCAGATCCCCTCT +
Preference number: 3 (lower is better)
Translates to: TRVHTATRTPDMSLGFPSQEAEQ*RSQIPS
Trigger: AGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTG...AGAAGGAAAACCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR GCA 72 bp AGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTaGTGGTATTTAGAAAGGTGCTTAAAGAAGTCAGCC +
Preference number: 3 (lower is better)
Translates to: STDHANRGGSLF*WYLERCLKKSA
Trigger: GGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR-3UTR CAA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAACTCAGGTATCTAAAATaGTCCCAAAACAAACACACA +
Preference number: 3 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKLRYLK*SQNKHT
Trigger: TGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAG...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GCTGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCGGTACATCCAGACCTaGGCTGGGGCTGTGAACGCG +
Preference number: 4 (lower is better)
Translates to: AGWAQPGPRGRAVEKPDPRYIQT*AGAVNA
Trigger: CGCGTTCACAGCCCCAGCGCAGGTCTGGATGTACCG...GGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GCTGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCGTCTGGCCGAGGATCTaGCACGGTAGAGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGWAQPGPRGRAVEKPDPVWPRI*HGRAVW
Trigger: CCAGACGGCTCTACCGTGCCAGATCCTCGGCCAGAC...GGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GCTGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCGCAAGAGACGGTTGTTaGCCCGCTGGTCACCTGAGT +
Preference number: 4 (lower is better)
Translates to: AGWAQPGPRGRAVEKPDPARDGC*PAGHLS
Trigger: ACTCAGGTGACCAGCGGGTCAACAACCGTCTCTTGC...GGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACGGCCGTCCCGGCTGCTaGCCTCTGACCGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYGRPGC*PLTGLR
Trigger: CCTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCC...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTTTGGCCTCCCCGGGATaGAACTTGGAGTTGTGGTCG +
Preference number: 4 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRALASPG*NLELWS
Trigger: CGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAA...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GCTGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCGGTTGTTGACCCGCTaGTCACCTGAGTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: AGWAQPGPRGRAVEKPDPRLLTR*SPESAP
Trigger: TGGTGCTGACTCAGGTGACCAGCGGGTCAACAACCG...GGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGTTCTCGTCGCTACCCTaGCCGTCCCGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWFSSLP*PSRLLP
Trigger: GGGCAGCAGCCGGGACGGCCAGGGTAGCGACGAGAA...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GTCCTCTGGGAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACGGCTGGTGCTGGTACTaGTCCATCCACTTCACGGTT +
Preference number: 4 (lower is better)
Translates to: VLWEVRLRVAGLPAPSRHGWCWY*SIHFTV
Trigger: AACCGTGAAGTGGATGGAGCAGTACCAGCACCAGCC...GTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGGGGGGTTGGCCACCTTaGGTGGGGGCTCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGAGGWPP*VGALAP
Trigger: AGGTGCCAGAGCCCCCACCCAAGGTGGCCAACCCCC...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GTCCTCTGGGAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACTGGGGAGTAGGCCACTaGGTTCTTGCAAACGTGCTC +
Preference number: 4 (lower is better)
Translates to: VLWEVRLRVAGLPAPSRHWGVGH*VLANVL
Trigger: GAGCACGTTTGCAAGAACCCAGTGGCCTACTCCCCA...GTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCGCGTCTGAGAGTCGCTaGACTTCCCGCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFASESR*TSRTLQ
Trigger: CTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGC...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGGGGGGCTCTGGCACCTaGGCGATGTGTGGACGCTTG +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGAGGSGT*AMCGRL
Trigger: CAAGCGTCCACACATCGCTCAGGTGCCAGAGCCCCC...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGGGTACGCATGATACGTaGGACCGTGTCGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWGTHDT*DRVGRP
Trigger: CGGCCTCCCGACACGGTCGCACGTATCATGCGTACC...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTTCTGATGTGCTCCTCTaGGTGTTTGGAGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRASDVLL*VFGGSC
Trigger: ACAGCTGCCTCCAAACACCCAGAGGAGCACATCAGA...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GCTGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCTCAGGGAACTGGCTCTaGAGAAAGCTGGCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: AGWAQPGPRGRAVEKPDPSGNWL*RKLALR
Trigger: TCTCAAGGCCAGCTTTCTCCAGAGCCAGTTCCCTGA...GGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GTCCTCTGGGAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACAGAATCACGTTGGGATaGTGCATGTCGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: VLWEVRLRVAGLPAPSRHRITLG*CMSTCS
Trigger: GGAGCATGTCGACATGCAGCATCCCAACGTGATTCT...GTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTGGCCATGGGTTTTGTTaGTTTCCTTGCTACGGCATC +
Preference number: 4 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRAGHGFC*FPCYGI
Trigger: GATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCC...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTGGCCTGGCCAGCCTCTaGAGGGACGCAGTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRGLASL*RDAVGV
Trigger: GACTCCGACTGCGTCCCTGCAGAGGCTGGCCAGGCC...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTCCATGCTTTAAGCGCTaGGTGGCAAACCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRAPCFKR*VANQIL
Trigger: CAGAATCTGGTTTGCCACCCAGCGCTTAAAGCATGG...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTGCTGTACAGAAGGCATaGCGTGTCCTAATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRAAVQKA*RVLMCL
Trigger: AAGACACATTAGGACACGTCATGCCTTCTGTACAGC...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGAAAGGTGCTTAAAGAAGTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTGGCCTGCCACGGCAAGTGTaGTGGGGGAGCAAGAGACGG +
Preference number: 4 (lower is better)
Translates to: RKVLKEVSHLLPSSPRAGLPRQV*WGSKRR
Trigger: CCGTCTCTTGCTCCCCCATCACACTTGCCGTGGCAG...GCCAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCCAAGGGATTCGCTGGTaGTGTGGACGATGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFQGIRW*CGRCPF
Trigger: AAAGGGGCATCGTCCACATCACCAGCGAATCCCTTG...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCATGGTTGGTGACTCCTaGCACGGCAAGTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFMVGDS*HGKCDG
Trigger: CCCATCACACTTGCCGTGGCAGGAGTCACCAACCAT...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTTTGATTTGGAAGATCTaGCGTCTGTCACCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRALIWKI*RLSPLS
Trigger: GGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAA...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACGTCGGGAGGCCGCGATaGCCAACTGGTCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYVGRPR*PTGLWQ
Trigger: TTGCCAAAGACCAGTTGGCCATCGCGGCCTCCCGAC...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp CCCTCTTGGCAGTTCAGAAAGCCTTGTGTGGGGCTAAGGCAGGGACCCCCAAAAGATGGTCGGGGGTACTaGCTGGATGGTGCCGTTGAA +
Preference number: 4 (lower is better)
Translates to: PSWQFRKPCVGLRQGPPKDGRGY*LDGAVE
Trigger: TTCAACGGCACCATCCAGTCAGTACCCCCGACCATC...TTTTGGGGGTCCCTGCCTTAGCCCCACACAAGGCTTTCTGAACTGCCAAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTAAACTTCCTAGCGTTTaGCTTGTGCGGTGTACTCAA +
Preference number: 4 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRAKLPSV*LVRCTQ
Trigger: TTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTT...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp CATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAGTTCTACCTGGCCGTCCCGGCTaGTGCCCTCTGACCGGTCTG +
Preference number: 4 (lower is better)
Translates to: HLFFLQRRSVPLISTAVLPGRPG*CPLTGL
Trigger: CAGACCGGTCAGAGGGCAGCAGCCGGGACGGCCAGG...TAGAACTGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGAACTGGTCGTACTCCTaGGGAGTAGGCCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWNWSYS*GVGHWV
Trigger: AACCCAGTGGCCTACTCCCCAGGAGTACGACCAGTT...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GCTGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCGCTTTCCTTGTGTGCTaGAGTCTACTGTTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AGWAQPGPRGRAVEKPDPAFLVC*SLLFEF
Trigger: AAACTCAAACAGTAGACTTCAGCACACAAGGAAAGC...GGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTACTGGATGGTGCCGTTaGACATCTTCTTCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AHGWGETISSFFKDGASRTGWCR*TSSSGP
Trigger: AGGCCCGGAAGAAGATGTTCAACGGCACCATCCAGT...ACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTGGACGATGCCCCTTTaGCACCGATATCGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGAWTMPL*HRYRWS
Trigger: TGACCACCGATATCGGTGTCAAAGGGGCATCGTCCA...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCAGGACTTTGGCACTATaGACAATTCCCACCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFRTLAL*TIPTGP
Trigger: AGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCT...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACAAGAGGCCGAGCAGTTaGGAAGCCAGATCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYKRPSS*EARSPL
Trigger: AAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTT...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGAGTCGATCTCTCTCCTaGTCAGCTTGGTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGASRSLS*SAWSPP
Trigger: GGGTGGAGACCAAGCTGAGCAGGAGAGAGATCGACT...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACGTCGGGGGTACTGACTaGATGGTGCCGTTGAACATC +
Preference number: 4 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYVGGTD*MVPLNI
Trigger: GATGTTCAACGGCACCATCCAGTCAGTACCCCCGAC...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATCGATGTGTGGACGCTTaGGTTCGGGGGCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GTGRDCNQSSYCNTYTRYRCVDA*VRGQLG
Trigger: CCCAAGCTGCCCCCGAACCCAAGCGTCCACACATCG...ATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCCACCTGAGCGATGTGTaGACGCTTGGGTTCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSHLSDV*TLGFGG
Trigger: GCCCCCGAACCCAAGCGTCCACACATCGCTCAGGTG...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCATCTGCCATGGGCTaGTGCTGGTACTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGASSAMG*CWYCSI
Trigger: GATGGAGCAGTACCAGCACCAGCCCATGGCAGATGA...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTCTGACCGGTCTGAGGTaGCCTCTGAGGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRLTGLR*PLRALL
Trigger: CAGCAAAGCCCTCAGAGGCCACCTCAGACCGGTCAG...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
3UTR CAA 72 bp CCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTaGGCAGTTCAGAAAGCCTTGTGTGGGGCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRGRAVEKPDPL*AVQKALCGAKA
Trigger: TGCCTTAGCCCCACACAAGGCTTTCTGAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGTGGCAAACCAGATTCTaGTGTGCTCCTCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWWQTRF*CAPLGV
Trigger: AACACCCAGAGGAGCACATCAGAATCTGGTTTGCCA...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCTTTGTGGGGGCCAACTaGGCGGGCAGCACAGTGATG +
Preference number: 4 (lower is better)
Translates to: FDLEDLPSVTSLQVETGAFVGAN*AGSTVM
Trigger: CATCACTGTGCTGCCCGCCCAGTTGGCCCCCACAAA...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTGCCGCGATGGCCAACTaGTCTTTGGCAAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRAAMAN*SLARDS
Trigger: CGAATCCCTTGCCAAAGACCAGTTGGCCATCGCGGC...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGAGAGAACTTGTTAACTaGGCACCGGAGAGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGARELVN*APESWS
Trigger: CGACCAGCTCTCCGGTGCCCAGTTAACAAGTTCTCT...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTGCCATGGGCTGGTGCTaGTACTGCTCCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRAMGWC*YCSIHF
Trigger: GAAGTGGATGGAGCAGTACCAGCACCAGCCCATGGC...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGAGCCAGATCCCCTCTTaGCAGTTCAGAAAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWSQIPS*QFRKPC
Trigger: ACAAGGCTTTCTGAACTGCCAAGAGGGGATCTGGCT...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAAGTCTGGGTACGCATaGTACGTGCGACCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSKSGYA*YVRPCR
Trigger: CCGACACGGTCGCACGTATCATGCGTACCCAGACTT...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp CCCTCTTGGCAGTTCAGAAAGCCTTGTGTGGGGCTAAGGCAGGGACCCCCAAAAGTTTTCAAGTTCTGCTaGCCAACTGTCCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSWQFRKPCVGLRQGPPKVFKFC*PTVLGH
Trigger: GTGGCCAAGGACAGTTGGGCAGCAGAACTTGAAAAC...TTTTGGGGGTCCCTGCCTTAGCCCCACACAAGGCTTTCTGAACTGCCAAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGGCTGGCCTTGAGATGTaGTATCTGCTCCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWAGLEM*YLLLCL
Trigger: AAGACAAAGGAGCAGATAGCACATCTCAAGGCCAGC...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGAAATGCCTCGATCAGTaGGGAATCTACGCCAAAACC +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWKCLDQ*GIYAKT
Trigger: GGTTTTGGCGTAGATTCCCCACTGATCGAGGCATTT...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCACTGCCCAACTGTCCTTaGCCACGTCAGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RDHLFFLQRRSVPLISTALPNCP*PRQAVV
Trigger: CACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAG...TGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCTCTCCTCGGGCTTCTTaGGCACCTTCTTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: FDLEDLPSVTSLQVETGASPRAS*APSWHP
Trigger: CGGATGCCAAGAAGGTGCCCAAGAAGCCCGAGGAGA...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCGAGACAGAGCACCATTaGGGGCTCCCACATCTTGGC +
Preference number: 4 (lower is better)
Translates to: FDLEDLPSVTSLQVETGAETEHH*GLPHLG
Trigger: GCCAAGATGTGGGAGCCCCCAATGGTGCTCTGTCTC...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCTCCACTTGGAGTCACTaGCAAGGGTGGCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSSTWSH*QGWPMA
Trigger: AGCCATGGGCCACCCTTGCCAGTGACTCCAAGTGGA...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTGGCCAGTCACCTCGATaGGCCGGTAAACCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGGQSPR*AGKPRH
Trigger: ATGCCGAGGTTTACCGGCTCATCGAGGTGACTGGCC...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGTGTACAAGGACCCATTaGAAACGCAGTAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWCTRTH*KRSSRT
Trigger: AGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACA...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACATATCGGTCCCGTGTTaGTCACATCCTGGGAATCTT +
Preference number: 4 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYISVPC*SHPGNL
Trigger: AAGATTCCCAGGATGTGAGCAACACGGGACCGATAT...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTTTTGTTGCTTTCCTTaGTACGGCATCGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGAFCCFP*YGIVAV
Trigger: CACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAA...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGCCCCTCAAATGGCTTTaGCTTTCCTTGTGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RVAHGWGETISSFFKDGAPLKWL*LSLCAE
Trigger: TTCAGCACACAAGGAAAGCCAAAGCCATTTGAGGGG...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACCCTGTCTGTGTGCAATaGCTTATTTTTGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYPVCVQ*LIFGGG
Trigger: TCCCCCTCCAAAAATAAGCCATTGCACACAGACAGG...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCAGCTGCGTCACCTTTGTaGGGGCCAACTGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPAASPL*GPTGRA
Trigger: TGCCCGCCCAGTTGGCCCCCACAAAGGTGACGCAGC...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGGGTTCGGGGGCAGCTTaGGGAGTCACCAAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWGSGAA*GVTKGL
Trigger: GAGACCCTTGGTGACTCCCCAAGCTGCCCCCGAACC...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGCTTGGGTGGGGGCTCTaGCACCTGAGCGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWLGWGL*HLSDVW
Trigger: CCACACATCGCTCAGGTGCCAGAGCCCCCACCCAAG...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTAGTCACTGGCAAGGGTaGCCCATGGCTGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGSHWQG*PMAGER
Trigger: TCTCTCCCCAGCCATGGGCCACCCTTGCCAGTGACT...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCACGTGGTTCTCGGGGGTaGTCTCCTCGGGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPRGSRG*SPRASW
Trigger: CCAAGAAGCCCGAGGAGATCACCCCCGAGAACCACG...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTCTGGCCATGGTTGGTaGCTCCTGCCACGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWSGHGW*LLPRQV
Trigger: CACTTGCCGTGGCAGGAGTCACCAACCATGGCCAGA...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGTCTGGGAGGTGCGTCTaGGAGTCGCTGGACTTCCCG +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWSGRCV*ESLDFP
Trigger: CGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGA...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGCTGCCTGTCTGTGTaGAATGGCTTATTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: AHGWGETISSFFKDGASRCCLSV*NGLFLE
Trigger: CTCCAAAAATAAGCCATTGCACACAGACAGGCAGCA...ACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAGACAGCTTGTTCCATaGTGTCTCGAAGCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSRQLVP*CLEASA
Trigger: GGCGGAAGCTTCGAGACAGCATGGAACAAGCTGTCT...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAAAGAAGTCAGCCACCTaGTACCCAGTTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RDHLFFLQRRSVPLISTAKKSAT*YPVLPG
Trigger: CCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTT...TGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAGTTCTATGTCCTAATGTGTCTTaGAGGAGCTCCACCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HLFFLQRRSVPLISTAVLCPNVS*RSSTPP
Trigger: CGGCGGGGTGGAGCTCCTCCAAGACACATTAGGACA...TAGAACTGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCACACGGTAGAGCCGTCTaGAGGATGGGCTGCGTCACC +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPHGRAV*RMGCVT
Trigger: GGTGACGCAGCCCATCCTCCAGACGGCTCTACCGTG...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCACCAAGGGTCTCTTCTaGCCATGGTTGGTGACTCCT +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSTKGLF*PWLVTP
Trigger: AGGAGTCACCAACCATGGCCAGAAGAGACCCTTGGT...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCAGGCAAGGGTGGCCCATaGCTGGGGAGAGACCATCTC +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPGKGGP*LGRDHL
Trigger: GAGATGGTCTCTCCCCAGCCATGGGCCACCCTTGCC...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTGCGGTGTACTCAAATaGGGGGCAGTGTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWCGVLK*GAVWDG
Trigger: CCCGTCCCACACTGCCCCCCATTTGAGTACACCGCA...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTGTCGACATGCTCCGTaGACTCGTTCAGGTTTTGCG +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCCRHAP*TRSGFA
Trigger: CGCAAAACCTGAACGAGTTCACGGAGCATGTCGACA...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAACACGTAGAGGGGGTTaGGAATCACGTTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: RDHLFFLQRRSVPLISTATRRGG*ESRWDA
Trigger: AGCATCCCAACGTGATTCTCAACCCCCTCTACGTGT...TGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCAGGGCCACTGGTGGTaGTGGACACGACATGGTTGG +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWQGHWW*WTRHGW
Trigger: CCAACCATGTCGTGTCCATCACCACCAGTGGCCCTG...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATCCTTGGGCACAAGGTTaGTATTTGGTGGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: GTGRDCNQSSYCNTYTRYPWAQG*YLVAAV
Trigger: TACAGCTGCCACCAAATATCAACCTTGTGCCCAAGG...ATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCCGTCAGGCTGTGGTGTaGCGATTCCTTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCRQAVV*RFLSLW
Trigger: CCAAAGAGAAAGGAATCGGCACACCACAGCCTGACG...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAATCACGTTGGGATGCTaGATGTCGACATGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RDHLFFLQRRSVPLISTAITLGC*MSTCSV
Trigger: CACGGAGCATGTCGACATGCAGCATCCCAACGTGAT...TGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCTTGACTTTTTGCAATTaGTGGCGAAGGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSLTFCN*WRRAGQ
Trigger: CTGCCCAGCCCTTCGCCAGCAATTGCAAAAAGTCAA...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCGGCGGGAGCCTCTTCTaGTGGTATTTAGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCGGSLF*WYLERC
Trigger: GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCC...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATCATCCAGACCTGCGCTaGGGCTGTGAACGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYHPDLR*GCERGD
Trigger: GTCCCCGCGTTCACAGCCCCAGCGCAGGTCTGGATG...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGCCCCGGGATGGAACTTaGAGTTGTGGTCGGATAGGG +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWPRDGT*SCGRIG
Trigger: CCCTATCCGACCACAACTCCAAGTTCCATCCCGGGG...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGAAAGGTGCTTAAAGAAGTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTGGCCTTGGCATCCGCTTTTaGTTTTCCAGGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: RKVLKEVSHLLPSSPRAGLGIRF*FSRLHD
Trigger: ATCATGAAGCCTGGAAAACCAAAAGCGGATGCCAAG...GCCAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTTTTCCTTCTGCGGTCCCTTCCACGTaGTTCTCGGGGGTGATCTCC +
Preference number: 4 (lower is better)
Translates to: TRVHTATRTPDMSLGFPSAVPST*FSGVIS
Trigger: GGAGATCACCCCCGAGAACCACGTGGAAGGGACCGC...AGAAGGAAAACCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCATGGGCACCGGAGAGCTaGTCGAGTCGAGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPWAPES*SSRDRA
Trigger: TGCTCTGTCTCGACTCGACCAGCTCTCCGGTGCCCA...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCTTGGGCTCTCGGCCATaGGTTTTGTTGCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSLGSRP*VLLLSL
Trigger: CAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAA...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CCCTCTTGGCAGTTCAGAAAGCCTTGTGTGGGGCTAAGGCAGGGACCCCCAAAACTTCGCAGAGCTTTTTaGGGTCCTTGTAATATTGTG +
Preference number: 4 (lower is better)
Translates to: PSWQFRKPCVGLRQGPPKLRRAF*GPCNIV
Trigger: CACAATATTACAAGGACCCCAAAAAGCTCTGCGAAG...TTTTGGGGGTCCCTGCCTTAGCCCCACACAAGGCTTTCTGAACTGCCAAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGGCTGGGCACAGCCTaGCCCAAGAGGCCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYWLGTA*PKRPSS
Trigger: ACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCA...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATGACCCGCTGGTCACCTaGGTCAGCACCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYDPLVT*VSTRLV
Trigger: GACTAGCCTGGTGCTGACTCAGGTGACCAGCGGGTC...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGGTAGCCGTGATCATCTaGCATGGGCTGGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWVAVII*HGLVLV
Trigger: TACCAGCACCAGCCCATGGCAGATGATCACGGCTAC...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGGGGACGGGGAGGGATTaGAACCAGAGTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWGTGRD*NQSSYC
Trigger: GCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCC...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCGTGATGGACACGACATaGTTGGTGGTTTCGATGGAC +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCVMDTT*LVVSMD
Trigger: GTCCATCGAAACCACCAACCATGTCGTGTCCATCAC...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGGGTCTCTTCTGGCCATaGTTGGTGACTCCTGCCACG +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWGLFWP*LVTPAT
Trigger: CGTGGCAGGAGTCACCAACCATGGCCAGAAGAGACC...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTGTCCTTGTAATATTGTaGAACCACATCACCCCCGTT +
Preference number: 4 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRVLVIL*NHITPV
Trigger: AACGGGGGTGATGTGGTTCCACAATATTACAAGGAC...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAAGAGAAAAGCAAGGTaGTTAGCCCTCCCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSKRKAR*LALPPE
Trigger: TTCAGGAGGGAGGGCTAACCACCTTGCTTTTCTCTT...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCTTCTGGGGACCAGCTaGTGCCATGCTTTAAGCGCT +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWLLGTS*CHALSA
Trigger: AGCGCTTAAAGCATGGCATCAGCTGGTCCCCAGAAG...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCACCTTCTGCCGCAGCCTaGCTCCAGCTATCTGATCTA +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPPSAAA*LQLSDL
Trigger: TAGATCAGATAGCTGGAGTCAGGCTGCGGCAGAAGG...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACAAAGTTAGGACTAACTaGAAAAGTGCACTCAGGTAT +
Preference number: 4 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYKVRTN*KSALRY
Trigger: ATACCTGAGTGCACTTTTTCAGTTAGTCCTAACTTT...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAAACCAGATTCTGATGTaGTCCTCTGGGTGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RDHLFFLQRRSVPLISTANQILM*SSGCLE
Trigger: CTCCAAACACCCAGAGGAGCACATCAGAATCTGGTT...TGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCAGACCAGCTGATGCCATaGTTTAAGCGCTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPDQLMP*FKRWVA
Trigger: TGCCACCCAGCGCTTAAAGCATGGCATCAGCTGGTC...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTGGGTTCTTGCAAACGTaGTCCTCAGGAGATGAACCT +
Preference number: 4 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGGFLQT*SSGDEP
Trigger: AGGTTCATCTCCTGAGGAGCACGTTTGCAAGAACCC...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCGGTTGGTGGTTTCGATaGACTGTTCCAAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: FDLEDLPSVTSLQVETGAGWWFR*TVPRQF
Trigger: AAACTGTCTTGGAACAGTCCATCGAAACCACCAACC...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTTAAAGAAGTCAGCCACACGACATGGTTGGTaGTTTCGATGGACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RGGSLFCWYLERCLKKSATRHGW*FRWTVP
Trigger: TGGAACAGTCCATCGAAACCACCAACCATGTCGTGT...GGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATGAGCCGTCTGGAGGATaGGCTGCGTCACCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYEPSGG*AASPLW
Trigger: CCACAAAGGTGACGCAGCCCATCCTCCAGACGGCTC...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGTTGTTGTTTAGCACCAGGCTAGTCTaGCCGAGGATCTGGCACGGT +
Preference number: 4 (lower is better)
Translates to: QSHSPLYPPDRKILLLLFSTRLV*PRIWHG
Trigger: ACCGTGCCAGATCCTCGGCCAGACTAGCCTGGTGCT...AAACAACAACAATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTTCTCTTTGAACTTCTaGGGGGCAAAGTCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCFSLNF*GAKSGY
Trigger: GTACCCAGACTTTGCCCCCCAGAAGTTCAAAGAGAA...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCAGTCTTGGCCGCTAACTaGTCGTACTCCTGGGGAGTA +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPVLAAN*SYSWGV
Trigger: TACTCCCCAGGAGTACGACCAGTTAGCGGCCAAGAC...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTCTAAGTAGTTCCACTTaGAGTCACTGGCAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGLSSST*SHWQGW
Trigger: CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAG...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTTCCCACCGGTCCTCTaGGAGGTGCGTCTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYFPPVL*EVRLRV
Trigger: GACTCTCAGACGCACCTCCCAGAGGACCGGTGGGAA...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGGGAGAAAGCTGGCCTTaGGATGTGCTATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWGESWP*DVLSAP
Trigger: AGGAGCAGATAGCACATCTCAAGGCCAGCTTTCTCC...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCATGCTGCATGTCGACATaGTCCGTGAACTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPCCMST*SVNSFR
Trigger: CCTGAACGAGTTCACGGAGCATGTCGACATGCAGCA...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAACCGGCTCGGGCTCCGTaGGAAAGAGGGGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKPARAP*ERGGKP
Trigger: TGGCTTTCCCCCTCTTTCCCACGGAGCCCGAGCCGG...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAAGGTTGATATTTGGTaGCAGCTGTACAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSKVDIW*QLYRRH
Trigger: ATGCCTTCTGTACAGCTGCCACCAAATATCAACCTT...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTTTTGCCAGACCCCATaGAATCCAAGACAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCFCQTP*NPRQLV
Trigger: AACAAGCTGTCTTGGATTCCATGGGGTCTGGCAAAA...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGTTGTTGTTTGGACCAGGCCAGTCTTaGCCGCTAACTGGTCGTACT +
Preference number: 4 (lower is better)
Translates to: QSHSPLYPPDRKILLLLFGPGQS*PLTGRT
Trigger: AGTACGACCAGTTAGCGGCCAAGACTGGCCTGGTCC...AAACAACAACAATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTTTTCCTTCTCGTGATCATCTGCCATaGGCTGGTGCTGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: TRVHTATRTPDMSLGFPSRDHLP*AGAGTA
Trigger: AGCAGTACCAGCACCAGCCCATGGCAGATGATCACG...AGAAGGAAAACCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGAGCATCTGTTCTCCTTaGACCAACGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWSICSP*TNAQSQ
Trigger: CTGAGATTGTGCGTTGGTTCAAGGAGAACAGATGCT...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATAGGCCACTGGGTTCTTaGAAACGTGCTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYRPLGS*KRAPQE
Trigger: CTCCTGAGGAGCACGTTTGCAAGAACCCAGTGGCCT...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCTAGCGTTTGACTTGTaGGGTGTACTCAAATGGGGG +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWLAFDL*GVLKWG
Trigger: CCCCCATTTGAGTACACCGCACAAGTCAAACGCTAG...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTTAAAGAAGTCAGCCTTATTCCCCCTCAAATaGCTTTGGCTTTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RGGSLFCWYLERCLKKSALFPLK*LWLSLC
Trigger: ACACAAGGAAAGCCAAAGCCATTTGAGGGGGAATAA...GGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCAACTTTTTGCAATTGCTaGCGAAGGGCTGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPTFCNC*RRAGQR
Trigger: TCTCTGCCCAGCCCTTCGCCAGCAATTGCAAAAAGT...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCACGTACTTTTTGGTTGTaGAGTTACATTCTGCACACA +
Preference number: 4 (lower is better)
Translates to: RDHLFFLQRRSVPLISTARTFWL*SYILHT
Trigger: TGTGTGCAGAATGTAACTTCACAACCAAAAAGTACG...TGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCCAGTATAGCAAGAGGTaGGGGCTAGGGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTQYSKR*GLGQRS
Trigger: GCTCCTCTGCCCTAGCCCTCACCTCTTGCTATACTG...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGAGAGTTTTCAAGTTCTaGTGCCCAACTGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWRVFKF*CPTVLG
Trigger: GCCAAGGACAGTTGGGCAGCAGAACTTGAAAACTCT...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGAGTAGGGGCAGTATTTaGACTCATAACCACCTTGGA +
Preference number: 4 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWSRGSI*THNHLG
Trigger: TCCAAGGTGGTTATGAGTGCAAATACTGCCCCTACT...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCTCTGCCATGGGCTGGTaGTGGTACTGCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTSAMGW*WYCSIH
Trigger: GTGGATGGAGCAGTACCAGCACCAGCCCATGGCAGA...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCATGGCAAACAGTCTTTTaGTGGCTCGCTGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPWQTVF*WLAAYF
Trigger: AAAGTAGGCAGCGAGCCAGCAAAAGACTGTTTGCCA...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCGTGTTGCTCACATCCTaGGAATCTTTTTATTCCAAA +
Preference number: 4 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSVLLTS*ESFYSK
Trigger: TTTGGAATAAAAAGATTCCCAGGATGTGAGCAACAC...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTGTCCGAACCATGCATaGAGTTGTAGATTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCCPNHA*SCRFSF
Trigger: AAACGAAAATCTACAACTCCATGCATGGTTCGGACA...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTGCAGTAGTAGGACTTTaGCACTATGAACAATTCCCA +
Preference number: 4 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGAVVGL*HYEQFP
Trigger: TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGC...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCGAAAGGAATTTGATTTaGAAGATCTGCCGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TDHANRGGSLFCWYLERCERNLI*KICRLS
Trigger: TGACAGACGGCAGATCTTCCAAATCAAATTCCTTTC...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAAGACGCAGTCGGAGTCTaGTTCAGCCAGTTCCGACAC +
Preference number: 4 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKDAVGV*FSQFRH
Trigger: GTGTCGGAACTGGCTGAATCAGACTCCGACTGCGTC...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGTTGAGATGTGCTATCTaGTCCTTTGTCTTCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWLRCAI*SFVFLR
Trigger: CCGCAAGAAGACAAAGGAGCAGATAGCACATCTCAA...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTTGGTATTTAGAAAGGTaGTTAAAGAAGTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGWYLER*LKKSAT
Trigger: GGTGGCTGACTTCTTTAAGCACCTTTCTAAATACCA...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAAACGGGCGTTCCAAAATaGAACTCTGCTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKTGVPK*NSAGSP
Trigger: GGGGGAGCCAGCAGAGTTCCATTTTGGAACGCCCGT...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGGAACTTGGAGTTGTaGTCGGATAGGGAGTCGTAC +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYWNLEL*SDRESY
Trigger: GTACGACTCCCTATCCGACCACAACTCCAAGTTCCA...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACAAGGTTGATATTTaGTGGCAGCTGTACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGANYVQGPIENAVVGLWHKVDI*WQLYRR
Trigger: CCTTCTGTACAGCTGCCACCAAATATCAACCTTGTG...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCACAAACAGTCTTTTGCTaGCTCGCTGCCTACTTTTAC +
Preference number: 4 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPQTVFC*LAAYFY
Trigger: GTAAAAGTAGGCAGCGAGCCAGCAAAAGACTGTTTG...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGGACACGACATGGTTaGTGGTTTCGATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYWTRHG*WFRWTV
Trigger: AACAGTCCATCGAAACCACCAACCATGTCGTGTCCA...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTTTTCCTTCTGGGAGCCTCTTCTGCTaGTATTTAGAAAGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: TRVHTATRTPDMSLGFPSGSLFC*YLERCL
Trigger: TAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCC...AGAAGGAAAACCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAACGTTCAGGTTTTGCGTaGAGTAGGGGCAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKRSGFA*SRGSIC
Trigger: GCAAATACTGCCCCTACTCCACGCAAAACCTGAACG...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCTCTTGGGCACCTTCTTaGCATCCGCTTTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTSWAPS*HPLLVF
Trigger: GAAAACCAAAAGCGGATGCCAAGAAGGTGCCCAAGA...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCGATTTCAGCCCTTCCTaGCGAGAAATCTCCCAAATT +
Preference number: 4 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTDFSPS*REISQI
Trigger: AATTTGGGAGATTTCTCGGCAGGAAGGGCTGAAATC...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAATTGTTCTACTACTTGTaGTGTCCGAACCATGCATGG +
Preference number: 4 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKLFYYL*CPNHAW
Trigger: CCATGCATGGTTCGGACATCACAAGTAGTAGAACAA...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp CAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGTTGTTGTTTTTCATGGTGAGGCTTTaGGCTAAAATCTTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: QSHSPLYPPDRKILLLLFFMVRL*AKILSN
Trigger: ATTTGACAAGATTTTAGCTCAAAGCCTCACCATGAA...AAACAACAACAATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR GCA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCAACCAGAGTTCATACTaGAACACGTACACCAGATAT +
Preference number: 4 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTNQSSY*NTYTRY
Trigger: ATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTT...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CCA 90 bp AAAAATTGGTTTTATTCAAACTTCCTAGCGTTTGACTTGTGCGGTGTACTCAAACGATCCAGTTCTGCTTaGGTAGGAAAAGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: KNWFYSNFLAFDLCGVLKRSSSA*VGKELF
Trigger: GAAAAGTTCTTTTCCTACCCAAGCAGAACTGGATCG...TTTGAGTACACCGCACAAGTCAAACGCTAGGAAGTTTGAATAAAACCAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR TCA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCTTGGAACGAATAAGGTaGAAGGCTTTTGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTLERIR*KAFGFI
Trigger: AATAAAGCCAAAAGCCTTTCACCTTATTCGTTCCAA...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp CGCTCGACTCCTCGTTCTCGTCGCTACCCTGGCCGTCCCGGCTGCTaGCCTCTGACCGGTCTGAGGTGGCCTCTGAGGGCTTTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RSTPRSRRYPGRPGC*PLTGLRWPLRALLA
Trigger: TGCCAGCAAAGCCCTCAGAGGCCACCTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCCAGGGTAGCGACGAGAACGAGGAGTCGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp CAACGCTCGACTCCTCGTTCTCGTCGCTACCCTGGCCGTCCCGGCTaGTGCCCTCTGACCGGTCTGAGGTGGCCTCTGAGGGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QRSTPRSRRYPGRPG*CPLTGLRWPLRALL
Trigger: CAGCAAAGCCCTCAGAGGCCACCTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCCAGGGTAGCGACGAGAACGAGGAGTCGAGCGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp AGCACCAGGCTAGTCTGGCCGAGGATCTGGCACGGTAGAGCCGTCTaGAGGATGGGCTGCGTCACCTTTGTGGGGGCCAACTGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: STRLVWPRIWHGRAV*RMGCVTFVGANWAG
Trigger: GCCCGCCCAGTTGGCCCCCACAAAGGTGACGCAGCCCATCCTCCAGACGGCTCTACCGTGCCAGATCCTCGGCCAGACTAGCCTGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp CGCTACCCTGGCCGTCCCGGCTGCTGCCCTCTGACCGGTCTGAGGTaGCCTCTGAGGGCTTTGCTGGCAAACAGTCTTTTGCTGGCTCGC +
Preference number: 5 (lower is better)
Translates to: RYPGRPGCCPLTGLR*PLRALLANSLLLAR
Trigger: GCGAGCCAGCAAAAGACTGTTTGCCAGCAAAGCCCTCAGAGGCCACCTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCCAGGGTAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp AGAGCCGTCTGGAGGATGGGCTGCGTCACCTTTGTGGGGGCCAACTaGGCGGGCAGCACAGTGATGGTCGGGGGTACTGACTGGATGGTG +
Preference number: 5 (lower is better)
Translates to: RAVWRMGCVTFVGAN*AGSTVMVGGTDWMV
Trigger: CACCATCCAGTCAGTACCCCCGACCATCACTGTGCTGCCCGCCCAGTTGGCCCCCACAAAGGTGACGCAGCCCATCCTCCAGACGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp TGTGGGGGCCAACTGGGCGGGCAGCACAGTGATGGTCGGGGGTACTaGCTGGATGGTGCCGTTGAACATCTTCTTCCGGGCCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: CGGQLGGQHSDGRGY*LDGAVEHLLPGLLH
Trigger: GTGGAGGAGGCCCGGAAGAAGATGTTCAACGGCACCATCCAGTCAGTACCCCCGACCATCACTGTGCTGCCCGCCCAGTTGGCCCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp CCCTGTCTAGGCCTGGCCAGCCTCTGCAGGGACGCAGTCGGAGTCTaGTTCAGCCAGTTCCGACACACCTTCTGCCGCAGCCTGACTCCA +
Preference number: 5 (lower is better)
Translates to: PCLGLASLCRDAVGV*FSQFRHTFCRSLTP
Trigger: TGGAGTCAGGCTGCGGCAGAAGGTGTGTCGGAACTGGCTGAATCAGACTCCGACTGCGTCCCTGCAGAGGCTGGCCAGGCCTAGACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp TGTCTGTCACCAGGCGGGCGGTCCCTTCCACGTGGTTCTCGGGGGTaGTCTCCTCGGGCTTCTTGGGCACCTTCTTGGCATCCGCTTTTG +
Preference number: 5 (lower is better)
Translates to: CLSPGGRSLPRGSRG*SPRASWAPSWHPLL
Trigger: CAAAAGCGGATGCCAAGAAGGTGCCCAAGAAGCCCGAGGAGATCACCCCCGAGAACCACGTGGAAGGGACCGCCCGCCTGGTGACAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp GACTCCTGCCACGGCAAGTGTGATGGGGGAGCAAGAGACGGTTGTTaGCCCGCTGGTCACCTGAGTCAGCACCAGGCTAGTCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: DSCHGKCDGGARDGC*PAGHLSQHQASLAE
Trigger: CTCGGCCAGACTAGCCTGGTGCTGACTCAGGTGACCAGCGGGTCAACAACCGTCTCTTGCTCCCCCATCACACTTGCCGTGGCAGGAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp AGGATCTCAGCTGTGTCTGTCACCAGGCGGGCGGTCCCTTCCACGTaGTTCTCGGGGGTGATCTCCTCGGGCTTCTTGGGCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RISAVSVTRRAVPST*FSGVISSGFLGTFL
Trigger: CAAGAAGGTGCCCAAGAAGCCCGAGGAGATCACCCCCGAGAACCACGTGGAAGGGACCGCCCGCCTGGTGACAGACACAGCTGAGATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp GGCGAAGGGCTGGGCAGAGAACTTGTTAACTGGGCACCGGAGAGCTaGTCGAGTCGAGACAGAGCACCATTGGGGGCTCCCACATCTTGG +
Preference number: 5 (lower is better)
Translates to: GEGLGRELVNWAPES*SSRDRAPLGAPTSW
Trigger: CCAAGATGTGGGAGCCCCCAATGGTGCTCTGTCTCGACTCGACCAGCTCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAGCCCTTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GTCCTCTGGGAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACGGGTTGAGAATCACGTaGGGATGCTGCATGTCGACA +
Preference number: 5 (lower is better)
Translates to: VLWEVRLRVAGLPAPSRHGLRIT*GCCMST
Trigger: TGTCGACATGCAGCATCCCAACGTGATTCTCAACCC...GTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTGTGCTATCTGCTCCTTaGTCTTCTTGCGGTCACTGG +
Preference number: 5 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRAVLSAP*SSCGHW
Trigger: CCAGTGACCGCAAGAAGACAAAGGAGCAGATAGCAC...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCCATCACCCCCGTTCTTaGGGCTCTCGGCCATGGGTT +
Preference number: 5 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFHHPRS*GSRPWV
Trigger: AACCCATGGCCGAGAGCCCAAAGAACGGGGGTGATG...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTCTGGCAAACAGTCTTTaGCTGGCTCGCTGCCTACTT +
Preference number: 5 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRALANSL*LARCLL
Trigger: AAGTAGGCAGCGAGCCAGCAAAAGACTGTTTGCCAG...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GTCCTCTGGGAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACAAGCCAGATCCCCTCTaGGCAGTTCAGAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: VLWEVRLRVAGLPAPSRHKPDPL*AVQKAL
Trigger: CAAGGCTTTCTGAACTGCCAAGAGGGGATCTGGCTT...GTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTCCCAGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp AGTGTGATGGGGGAGCAAGAGACGGTTGTTGACCCGCTGGTCACCTaGGTCAGCACCAGGCTAGTCTGGCCGAGGATCTGGCACGGTAGA +
Preference number: 5 (lower is better)
Translates to: SVMGEQETVVDPLVT*VSTRLVWPRIWHGR
Trigger: TCTACCGTGCCAGATCCTCGGCCAGACTAGCCTGGTGCTGACTCAGGTGACCAGCGGGTCAACAACCGTCTCTTGCTCCCCCATCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTTGGGCTGCGTCACCTTaGTGGGGGCCAACTGGGCGG +
Preference number: 5 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRWAASP*WGPTGR
Trigger: CCGCCCAGTTGGCCCCCACAAAGGTGACGCAGCCCA...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GCTGGCTGGGCACAGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCCTGTTCTTGACTTTTaGCAATTGCTGGCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: AGWAQPGPRGRAVEKPDPPVLDF*QLLAKG
Trigger: GCCCTTCGCCAGCAATTGCAAAAAGTCAAGAACAGG...GGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCTGTGCCCAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACCGGACCAGGCCAGTCTaGGCCGCTAACTGGTCGTAC +
Preference number: 5 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYRTRPV*AANWSY
Trigger: GTACGACCAGTTAGCGGCCAAGACTGGCCTGGTCCG...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp CTCGAAGCTTCCGCCTCTCCGAGAACCAGGAGTCGATCTCTCTCCTaGTCAGCTTGGTCTCCACCCTTAGCCGATCCAGTTCTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LEASASPRTRSRSLS*SAWSPPLADPVLLG
Trigger: CCCAAGCAGAACTGGATCGGCTAAGGGTGGAGACCAAGCTGAGCAGGAGAGAGATCGACTCCTGGTTCTCGGAGAGGCGGAAGCTTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp TCAGTTCGGACCAGGCCAGTCTTGGCCGCTAACTGGTCGTACTCCTaGGGAGTAGGCCACTGGGTTCTTGCAAACGTGCTCCTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SVRTRPVLAANWSYS*GVGHWVLANVLLRR
Trigger: TCTCCTGAGGAGCACGTTTGCAAGAACCCAGTGGCCTACTCCCCAGGAGTACGACCAGTTAGCGGCCAAGACTGGCCTGGTCCGAACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCGGATGGAACTTGGAGTaGTGGTCGGATAGGGAGTCG +
Preference number: 5 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFGWNLE*WSDRES
Trigger: CGACTCCCTATCCGACCACAACTCCAAGTTCCATCC...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGTCCCCGGGATGGAACTaGGAGTTGTGGTCGGATAGG +
Preference number: 5 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWSPGWN*ELWSDR
Trigger: CCTATCCGACCACAACTCCAAGTTCCATCCCGGGGA...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAGGTGCGTCTGAGAGTCGCTGGACTTCCCGCACCCTCCAGGCACACGCGAGCTTTCTTGGGCACCTTCTaGGCATCCGCTTTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: EVRLRVAGLPAPSRHTRAFLGTF*ASAFGF
Trigger: AAAACCAAAAGCGGATGCCAAGAAGGTGCCCAAGAA...AGCTCGCGTGTGCCTGGAGGGTGCGGGAAGTCCAGCGACTCTCAGACGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCAGACGGAGCGTCCCGTaGATCAGCACAGCAGTTCTA +
Preference number: 5 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFRRSVP*ISTAVL
Trigger: TAGAACTGCTGTGCTGATCAACGGGACGCTCCGTCT...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp ACCCCCGTTCTTTGGGCTCTCGGCCATGGGTTTTGTTGCTTTCCTTaGTACGGCATCGTAGCCGTGATCATCTGCCATGGGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: TPVLWALGHGFCCFP*YGIVAVIICHGLVL
Trigger: CAGCACCAGCCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp CAACGCACAATCTCAGTTCGGACCAGGCCAGTCTTGGCCGCTAACTaGTCGTACTCCTGGGGAGTAGGCCACTGGGTTCTTGCAAACGTG +
Preference number: 5 (lower is better)
Translates to: QRTISVRTRPVLAAN*SYSWGVGHWVLANV
Trigger: CACGTTTGCAAGAACCCAGTGGCCTACTCCCCAGGAGTACGACCAGTTAGCGGCCAAGACTGGCCTGGTCCGAACTGAGATTGTGCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACGACTGGATGGTGCCGTaGAACATCTTCTTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYDWMVP*NIFFRA
Trigger: GGCCCGGAAGAAGATGTTCAACGGCACCATCCAGTC...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGCCTGGCCCAAGAGGCCGAGCAGTTGAGAAGCCAGATCCCCTCTTGGCAGTTCTCACCTCTCTCCAAGTaGAGACAGGGGCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: SLAQEAEQLRSQIPSWQFSPLSK*RQGPGF
Trigger: AAATCCAGGCCCCTGTCTCAACTTGGAGAGAGGTGA...GAACTGCCAAGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTGGGCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp TCGGAGTCTGATTCAGCCAGTTCCGACACACCTTCTGCCGCAGCCTaGCTCCAGCTATCTGATCTATCTGAGATCGCATCCTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: SESDSASSDTPSAAA*LQLSDLSEIASSSP
Trigger: CGGGGAGGAGGATGCGATCTCAGATAGATCAGATAGCTGGAGTCAGGCTGCGGCAGAAGGTGTGTCGGAACTGGCTGAATCAGACTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp CAAGTTCTGCTGCCCAACTGTCCTTGGCCACGTCAGGCTGTGGTGTaGCGATTCCTTTCTCTTTGGCCCTGTCTACTTCCTCGGGCACAT +
Preference number: 5 (lower is better)
Translates to: QVLLPNCPWPRQAVV*RFLSLWPCLLPRAH
Trigger: ATGTGCCCGAGGAAGTAGACAGGGCCAAAGAGAAAGGAATCGGCACACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CCA 90 bp CTTTTTGCAATTGCTGGCGAAGGGCTGGGCAGAGAACTTGTTAACTaGGCACCGGAGAGCTGGTCGAGTCGAGACAGAGCACCATTGGGG +
Preference number: 5 (lower is better)
Translates to: LFAIAGEGLGRELVN*APESWSSRDRAPLG
Trigger: CCCCAATGGTGCTCTGTCTCGACTCGACCAGCTCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAGCCCTTCGCCAGCAATTGCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGTGGAGAAAGCTGGCCTaGAGATGTGCTATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWWRKLA*RCAICS
Trigger: GGAGCAGATAGCACATCTCAAGGCCAGCTTTCTCCA...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp GGCATCGTCAGGGAACTGGCTCTGGAGAAAGCTGGCCTTGAGATGTaGTATCTGCTCCTTTGTCTTCTTGCGGTCACTGGCTGGTGTGAG +
Preference number: 5 (lower is better)
Translates to: GIVRELALEKAGLEM*YLLLCLLAVTGWCE
Trigger: CTCACACCAGCCAGTGACCGCAAGAAGACAAAGGAGCAGATAGCACATCTCAAGGCCAGCTTTCTCCAGAGCCAGTTCCCTGACGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp GGGTTTTGTTGCTTTCCTTGCTACGGCATCGTAGCCGTGATCATCTaGCATGGGCTGGTGCTGGTACTGCTCCATCCACTTCACGGTTCC +
Preference number: 5 (lower is better)
Translates to: GFCCFPCYGIVAVII*HGLVLVLLHPLHGS
Trigger: GGAACCGTGAAGTGGATGGAGCAGTACCAGCACCAGCCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp AACCACATCACCCCCGTTCTTTGGGCTCTCGGCCATGGGTTTTGTTaGTTTCCTTGCTACGGCATCGTAGCCGTGATCATCTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: NHITPVLWALGHGFC*FPCYGIVAVIICHG
Trigger: CCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGTGATGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGCATATCGGTCCCGTGTaGCTCACATCCTGGGAATCT +
Preference number: 5 (lower is better)
Translates to: RVAHGWGETISSFFKDGAHIGPV*LTSWES
Trigger: AGATTCCCAGGATGTGAGCAACACGGGACCGATATG...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTCCGATTCCTTTCTCTTaGGCCCTGTCTACTTCCTCG +
Preference number: 5 (lower is better)
Translates to: AHGWGETISSFFKDGASRPIPFS*ALSTSS
Trigger: CGAGGAAGTAGACAGGGCCAAAGAGAAAGGAATCGG...ACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCGGGAGCAAGAGACGGTaGTTGACCCGCTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: FDLEDLPSVTSLQVETGAGSKRR*LTRWSP
Trigger: AGGTGACCAGCGGGTCAACAACCGTCTCTTGCTCCC...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTGCAGTTCAGAAAGCCTaGTGTGGGGCTAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRAVQKA*CGAKAG
Trigger: CCCTGCCTTAGCCCCACACAAGGCTTTCTGAACTGC...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp CCGAGATCCCAGAATCACTGTCACCAGTTCCAGGGCCACTGGTGGTaGTGGACACGACATGGTTGGTGGTTTCGATGGACTGTTCCAAGA +
Preference number: 5 (lower is better)
Translates to: PRSQNHCHQFQGHWW*WTRHGWWFRWTVPR
Trigger: TCTTGGAACAGTCCATCGAAACCACCAACCATGTCGTGTCCATCACCACCAGTGGCCCTGGAACTGGTGACAGTGATTCTGGGATCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp AAACCTCGGCATCGTCAGGGAACTGGCTCTGGAGAAAGCTGGCCTTaGGATGTGCTATCTGCTCCTTTGTCTTCTTGCGGTCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: KPRHRQGTGSGESWP*DVLSAPLSSCGHWL
Trigger: CAGCCAGTGACCGCAAGAAGACAAAGGAGCAGATAGCACATCTCAAGGCCAGCTTTCTCCAGAGCCAGTTCCCTGACGATGCCGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp CCATCCACTTCACGGTTCCCGTTTTCAGCAAGCATCTGTTCTCCTTaGACCAACGCACAATCTCAGTTCGGACCAGGCCAGTCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: PSTSRFPFSASICSP*TNAQSQFGPGQSWP
Trigger: CGGCCAAGACTGGCCTGGTCCGAACTGAGATTGTGCGTTGGTTCAAGGAGAACAGATGCTTGCTGAAAACGGGAACCGTGAAGTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp CTGATGCCATGCTTTAAGCGCTGGGTGGCAAACCAGATTCTGATGTaGTCCTCTGGGTGTTTGGAGGCAGCTGTCAGCCAGGACAACTCA +
Preference number: 5 (lower is better)
Translates to: LMPCFKRWVANQILM*SSGCLEAAVSQDNS
Trigger: TGAGTTGTCCTGGCTGACAGCTGCCTCCAAACACCCAGAGGAGCACATCAGAATCTGGTTTGCCACCCAGCGCTTAAAGCATGGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp TGGCCTCTGAGGGCTTTGCTGGCAAACAGTCTTTTGCTGGCTCGCTaGCTACTTTTACCCTGGTCACCAACTTCTCCAAGTCCTCTTCGC +
Preference number: 5 (lower is better)
Translates to: WPLRALLANSLLLAR*LLLPWSPTSPSPLR
Trigger: GCGAAGAGGACTTGGAGAAGTTGGTGACCAGGGTAAAAGTAGGCAGCGAGCCAGCAAAAGACTGTTTGCCAGCAAAGCCCTCAGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp TTGTTGCTTTCCTTGCTACGGCATCGTAGCCGTGATCATCTGCCATaGGCTGGTGCTGGTACTGCTCCATCCACTTCACGGTTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: LLLSLLRHRSRDHLP*AGAGTAPSTSRFPF
Trigger: AAACGGGAACCGTGAAGTGGATGGAGCAGTACCAGCACCAGCCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGGTTGTAGATTTTCGTTaGCTAGCCATGCTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWVVDFR*LAMLPV
Trigger: GACAGGCAGCATGGCTAGCAAACGAAAATCTACAAC...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTGCTGCCCAACTGTCCTaGGCCACGTCAGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGAAQLS*ATSGCG
Trigger: ACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGC...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GTAGTAGGACTTTGGCACTATGAACAATTCCCACCGGTCCTCTGGGAGGTGCGTAACTTCAGCTTGAAGTaGGCCTCCCCGGGATGGAAC +
Preference number: 5 (lower is better)
Translates to: VVGLWHYEQFPPVLWEVRNFSLK*ASPGWN
Trigger: GTTCCATCCCGGGGAGGCCAACTTCAAGCTGAAGTT...ACGCACCTCCCAGAGGACCGGTGGGAATTGTTCATAGTGCCAAAGTCCTACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GGGCAGTGTGGGACGGGGAGGGATTGCAACCAGAGTTCATACTGCAACACGTACATGGACACGACATGGTaGGTGGTTTCGATGGACTGT +
Preference number: 5 (lower is better)
Translates to: GQCGTGRDCNQSSYCNTYMDTTW*VVSMDC
Trigger: ACAGTCCATCGAAACCACCAACCATGTCGTGTCCAT...GTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCACACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCATCTCCTCGGGCTTCTaGGGCACCTTCTTGGCATCC +
Preference number: 5 (lower is better)
Translates to: FDLEDLPSVTSLQVETGAISSGF*GTFLAS
Trigger: GGATGCCAAGAAGGTGCCCAAGAAGCCCGAGGAGAT...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCGGCTGGGCAGAGAACTaGTTAACTGGGCACCGGAGA +
Preference number: 5 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSGWAEN*LTGHRR
Trigger: TCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAGCC...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp TGGTCTTTGGCAAGGGATTCGCTGGTGATGTGGACGATGCCCCTTTaGCACCGATATCGGTGGTCACTGAACCACTTCTTGATCTCGCTC +
Preference number: 5 (lower is better)
Translates to: WSLARDSLVMWTMPL*HRYRWSLNHFLISL
Trigger: GAGCGAGATCAAGAAGTGGTTCAGTGACCACCGATATCGGTGTCAAAGGGGCATCGTCCACATCACCAGCGAATCCCTTGCCAAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CCCTCTTGGCAGTTCAGAAAGCCTTGTGTGGGGCTAAGGCAGGGACCCCCAAAATGGCTTTGGCTTTCCTaGTGTGCTGAAGTCTACTGT +
Preference number: 5 (lower is better)
Translates to: PSWQFRKPCVGLRQGPPKWLWLS*CAEVYC
Trigger: ACAGTAGACTTCAGCACACAAGGAAAGCCAAAGCCA...TTTTGGGGGTCCCTGCCTTAGCCCCACACAAGGCTTTCTGAACTGCCAAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGAAGCATCTGTTCTCCTaGAACCAACGCACAATCTCA +
Preference number: 5 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWKHLFS*NQRTIS
Trigger: TGAGATTGTGCGTTGGTTCAAGGAGAACAGATGCTT...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTTCCTAGCGTTTGACTaGTGCGGTGTACTCAAATGG +
Preference number: 5 (lower is better)
Translates to: RVAHGWGETISSFFKDGAFLAFD*CGVLKW
Trigger: CCATTTGAGTACACCGCACAAGTCAAACGCTAGGAA...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp CGTTTTCTTTGGAAGAGTTTTCAAGTTCTGCTGCCCAACTGTCCTTaGCCACGTCAGGCTGTGGTGTGCCGATTCCTTTCTCTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: RFLWKSFQVLLPNCP*PRQAVVCRFLSLWP
Trigger: GGGCCAAAGAGAAAGGAATCGGCACACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAACTTGAAAACTCTTCCAAAGAAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS-3UTR CAA 90 bp CCTCCAGGCACACGCGAGCTAAGTAGTTCCACTTGGAGTCACTGGCAAGGGTGGAGGGCAGAGTTGTATTaGGTAGTATTTAGTGGGACA +
Preference number: 5 (lower is better)
Translates to: PPGTRELSSSTWSHWQGWRAELY*VVFSGT
Trigger: TGTCCCACTAAATACTACCAAATACAACTCTGCCCT...CCACCCTTGCCAGTGACTCCAAGTGGAACTACTTAGCTCGCGTGTGCCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCTCACTGAACCACTTCTaGATCTCGCTCCTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: FDLEDLPSVTSLQVETGASLNHF*ISLLAR
Trigger: CCTTGCCAGGAGCGAGATCAAGAAGTGGTTCAGTGA...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGGGTGGCCCATGGCTGGGGAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGCCGATCCAGTTCTGCTaGGGTAGGAAAAGAACTTTT +
Preference number: 5 (lower is better)
Translates to: RVAHGWGETISSFFKDGAPIQFC*GRKRTF
Trigger: AAAAGTTCTTTTCCTACCCAAGCAGAACTGGATCGG...CGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTCCCCAGCCATGGGCCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp AATATTGTGGAACCACATCACCCCCGTTCTTTGGGCTCTCGGCCATaGGTTTTGTTGCTTTCCTTGCTACGGCATCGTAGCCGTGATCAT +
Preference number: 5 (lower is better)
Translates to: NIVEPHHPRSLGSRP*VLLLSLLRHRSRDH
Trigger: ATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGTGATGTGGTTCCACAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCACATCTTGGCCTTTTTaGCCAGACCCCATGGAATCC +
Preference number: 5 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSTSWPF*PDPMES
Trigger: GGATTCCATGGGGTCTGGCAAAAAAGGCCAAGATGT...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCGTTTTGTTGCTTTCCTaGCTACGGCATCGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSVLLLS*LRHRSR
Trigger: ACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAAC...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp TTTGATTTGGAAGATCTGCCGTCTGTCACCTCTCTCCAAGTTGAGACAGGGGCCTTAATTAACTTCAGCTaGAAGTTGGCCTCCCCGGGA +
Preference number: 5 (lower is better)
Translates to: FDLEDLPSVTSLQVETGALINFS*KLASPG
Trigger: TCCCGGGGAGGCCAACTTCAAGCTGAAGTTAATTAA...GGCCCCTGTCTCAACTTGGAGAGAGGTGACAGACGGCAGATCTTCCAAATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCTTAAAGAAGTCAGCCACCTTGGGCACAAGGTaGATATTTGGTGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: RGGSLFCWYLERCLKKSATLGTR*IFGGSC
Trigger: ACAGCTGCCACCAAATATCAACCTTGTGCCCAAGGT...GGCTGACTTCTTTAAGCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAAGTGGGACAGGGACCTaGGGCACAAGGTTGATATTT +
Preference number: 5 (lower is better)
Translates to: RDHLFFLQRRSVPLISTASGTGT*GTRLIF
Trigger: AAATATCAACCTTGTGCCCAAGGTCCCTGTCCCACT...TGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGGGATTGCAACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTGCTCCTTTGTCTTCTaGCGGTCACTGGCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: RDCNQSSYCNTYTRYVSWCSFVF*RSLAGV
Trigger: CACACCAGCCAGTGACCGCAAGAAGACAAAGGAGCA...CCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGTTGCAATCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCAGTTCTACGGCCATGGGTTTTGTaGCTTTCCTTGCTACGGCAT +
Preference number: 5 (lower is better)
Translates to: HLFFLQRRSVPLISTAVLRPWVL*LSLLRH
Trigger: ATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCG...TAGAACTGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTTCTCGGCCATGGGTTTaGTTGCTTTCCTTGCTACGG +
Preference number: 5 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGSRPWV*LLSLLR
Trigger: CCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGA...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AATGTCACAATAGTACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTGGGGTCCTTGTAATATaGTGGAACCACATCACCCCC +
Preference number: 5 (lower is better)
Translates to: NVTIVLIMLTEAGASSAGGVLVI*WNHITP
Trigger: GGGGGTGATGTGGTTCCACAATATTACAAGGACCCC...ACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGTACTATTGTGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCACAAGAGGCCGAGCAGTaGAGAAGCCAGATCCCCTCT +
Preference number: 5 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPQEAEQ*RSQIPS
Trigger: AGAGGGGATCTGGCTTCTCAACTGCTCGGCCTCTTG...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 90 bp TTTCACCTCTATCACTTCGTTTTCTTTGGAAGAGTTTTCAAGTTCTaGTGCCCAACTGTCCTTGGCCACGTCAGGCTGTGGTGTGCCGAT +
Preference number: 5 (lower is better)
Translates to: FHLYHFVFFGRVFKF*CPTVLGHVRLWCAD
Trigger: ATCGGCACACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAACTTGAAAACTCTTCCAAAGAAAACGAAGTGATAGAGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CCA 90 bp TTACCCTGGTCACCAACTTCTCCAAGTCCTCTTCGCAGAGCTTTTTaGGGTCCTTGTAATATTGTGGAACCACATCACCCCCGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LPWSPTSPSPLRRAF*GPCNIVEPHHPRSL
Trigger: CAAAGAACGGGGGTGATGTGGTTCCACAATATTACAAGGACCCCAAAAAGCTCTGCGAAGAGGACTTGGAGAAGTTGGTGACCAGGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGAAAGGTGCTTAAAGAAGTCAGCCACCTGCTACCCAGTTCTCCCAGGGCTGGCAGGGAGTCGTACTTTTaGGTTGTGAAGTTACATTCT +
Preference number: 5 (lower is better)
Translates to: RKVLKEVSHLLPSSPRAGRESYF*VVKLHS
Trigger: AGAATGTAACTTCACAACCAAAAAGTACGACTCCCT...GCCAGCCCTGGGAGAACTGGGTAGCAGGTGGCTGACTTCTTTAAGCACCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCGCGATGTGTGGACGCTaGGGTTCGGGGGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTAMCGR*GSGAAW
Trigger: CCAAGCTGCCCCCGAACCCAAGCGTCCACACATCGC...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CCCTCTTGGCAGTTCAGAAAGCCTTGTGTGGGGCTAAGGCAGGGACCCCCAAAACTCAGGTATCTAAAATaGTCCCAAAACAAACACACA +
Preference number: 5 (lower is better)
Translates to: PSWQFRKPCVGLRQGPPKLRYLK*SQNKHT
Trigger: TGTGTGTTTGTTTTGGGACAATTTTAGATACCTGAG...TTTTGGGGGTCCCTGCCTTAGCCCCACACAAGGCTTTCTGAACTGCCAAGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGTGGGACGGGGAGGGATaGCAACCAGAGTTCATACTG +
Preference number: 5 (lower is better)
Translates to: RGANYVQGPIENAVVGLWWDGEG*QPEFIL
Trigger: CAGTATGAACTCTGGTTGCAATCCCTCCCCGTCCCA...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 90 bp AACTTCAGCTTGAAGTTGGCCTCCCCGGGATGGAACTTGGAGTTGTaGTCGGATAGGGAGTCGTACTTTTTGGTTGTGAAGTTACATTCT +
Preference number: 5 (lower is better)
Translates to: NFSLKLASPGWNLEL*SDRESYFLVVKLHS
Trigger: AGAATGTAACTTCACAACCAAAAAGTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGCTGAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS-3UTR CAA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCTTTCAGCACAGAAAATaGGAATGGCACCAACCACTA +
Preference number: 5 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSFQHRK*EWHQPL
Trigger: TAGTGGTTGGTGCCATTCCAATTTTCTGTGCTGAAA...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATTGTTGTTGTTTAGCAAGAGACGGTTGTaGACCCGCTGGTCACCTGAG +
Preference number: 5 (lower is better)
Translates to: QSHSPLYPPDRKILLLLFSKRRL*TRWSPE
Trigger: CTCAGGTGACCAGCGGGTCAACAACCGTCTCTTGCT...AAACAACAACAATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATGTGGACGATGCCCCTTaGACACCGATATCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYVDDAP*TPISVV
Trigger: GACCACCGATATCGGTGTCAAAGGGGCATCGTCCAC...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCACTTGACTTTTTGCAATaGCTGGCGAAGGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPLDFLQ*LAKGWA
Trigger: TGCCCAGCCCTTCGCCAGCAATTGCAAAAAGTCAAG...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp TTTGGCCCTGTCTACTTCCTCGGGCACATCTTGTTCTACTACTTGTaGTGTCCGAACCATGCATGGAGTTGTAGATTTTCGTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: FGPVYFLGHILFYYL*CPNHAWSCRFSFAS
Trigger: GCTAGCAAACGAAAATCTACAACTCCATGCATGGTTCGGACATCACAAGTAGTAGAACAAGATGTGCCCGAGGAAGTAGACAGGGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS-3UTR CAA 90 bp AGAGGAGCAAACTATGTACAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGTGCAATGGCTTATTTTaGGAGGGGGATAAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RGANYVQGPIENAVVGLWCNGLF*EGDKEG
Trigger: CCCCTCCTTATCCCCCTCCAAAAATAAGCCATTGCA...CCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTGTACATAGTTTGCTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAGAGACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTTGATCAGCACAGCTGCTGGAAAAGGAAGTaGCCCTTGATTAAAAAGGTA +
Preference number: 5 (lower is better)
Translates to: ERPSLLSSKTERPVDQHSCWKRK*PLIKKV
Trigger: TACCTTTTTAATCAAGGGCAACTTCCTTTTCCAGCA...GCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 90 bp GACACGACATGGTTGGTGGTTTCGATGGACTGTTCCAAGACAGTTTaGTTATTGCGTTTAATTAACTTCAGCTTGAAGTTGGCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: DTTWLVVSMDCSKTV*LLRLINFSLKLASP
Trigger: CGGGGAGGCCAACTTCAAGCTGAAGTTAATTAAACGCAATAATCAAACTGTCTTGGAACAGTCCATCGAAACCACCAACCATGTCGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CCA 90 bp TTATTGCGTTTAATTAACTTCAGCTTGAAGTTGGCCTCCCCGGGATaGAACTTGGAGTTGTGGTCGGATAGGGAGTCGTACTTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LLRLINFSLKLASPG*NLELWSDRESYFLV
Trigger: AACCAAAAAGTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGCTGAAGTTAATTAAACGCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS-3UTR CAA 90 bp ACCAGAGTTCATACTGCAACACGTACACCAGATATGTCTCTTGGTTTTCCTTCTCCACCTTGGAGTTTTTaGGACTGGCTTTCCCCCATA +
Preference number: 5 (lower is better)
Translates to: TRVHTATRTPDMSLGFPSPPWSF*DWLSPI
Trigger: TATGGGGGAAAGCCAGTCCAAAAAACTCCAAGGTGG...AGAAGGAAAACCAAGAGACATATCTGGTGTACGTGTTGCAGTATGAACTCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp ACTGATCATGCTAACAGAGGCGGGAGCCTCTTCTGCTGGTATTTAGAAAGGTGCGTATCCAGGGCAGAGTaGTATTTGGTAGTATTTAGT +
Preference number: 5 (lower is better)
Translates to: TDHANRGGSLFCWYLERCVSRAE*YLVVFS
Trigger: ACTAAATACTACCAAATACAACTCTGCCCTGGATAC...GCACCTTTCTAAATACCAGCAGAAGAGGCTCCCGCCTCTGTTAGCATGATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCATGGCCAACTGGTCTTaGGCAAGGGATTCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTMANWS*ARDSLV
Trigger: CACCAGCGAATCCCTTGCCAAAGACCAGTTGGCCAT...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp GAAATGAAAACCAAAGCCATTCACCTCTGTACCCTCCAGATAGGAAGATCTTATGGAATCCAAGACAGCTaGTTCCATGCTGTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: EMKTKAIHLCTLQIGRSYGIQDS*FHAVSK
Trigger: CTTCGAGACAGCATGGAACAAGCTGTCTTGGATTCC...ATAAGATCTTCCTATCTGGAGGGTACAGAGGTGAATGGCTTTGGTTTTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp ATAAAGTCTCCCTACTTAAAATCCAGTAGATATCATGGCACTAATGCTAACACCGAACTCGTTCAGGTTTaGCGTGGAGTAGGGGCAGTA +
Preference number: 5 (lower is better)
Translates to: IKSPYLKSSRYHGTNANTELVQV*RGVGAV
Trigger: TACTGCCCCTACTCCACGCAAAACCTGAACGAGTTC...GGTGTTAGCATTAGTGCCATGATATCTACTGGATTTTAAGTAGGGAGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS-3UTR CAA 90 bp CAAGGACCCATTGAAAACGCAGTAGTAGGACTTTGGCACTATGAACAATTCCCAAACTTGTTGAAAGAGTaGATCATCGTGGCATTTGTA +
Preference number: 5 (lower is better)
Translates to: QGPIENAVVGLWHYEQFPNLLKE*IIVAFV
Trigger: TACAAATGCCACGATGATCAACTCTTTCAACAAGTT...TGGGAATTGTTCATAGTGCCAAAGTCCTACTACTGCGTTTTCAATGGGTCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp CCTCGTTCTCGTCGCTACCCTGGCCGTCCCGGCTGCTaGCCTCTGACCGGTCTGAGGTGGCCTCTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: PRSRRYPGRPGC*PLTGLRWPLRA
Trigger: AGCCCTCAGAGGCCACCTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCCAGGGTAGCGACGAGAACGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp ACTCCTCGTTCTCGTCGCTACCCTGGCCGTCCCGGCTaGTGCCCTCTGACCGGTCTGAGGTGGCCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: TPRSRRYPGRPG*CPLTGLRWPLR
Trigger: CCTCAGAGGCCACCTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCCAGGGTAGCGACGAGAACGAGGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp GGCCGAGGATCTGGCACGGTAGAGCCGTCTGGAGGATaGGCTGCGTCACCTTTGTGGGGGCCAACTGGGCGG +
Preference number: 6 (lower is better)
Translates to: GRGSGTVEPSGG*AASPLWGPTGR
Trigger: CCGCCCAGTTGGCCCCCACAAAGGTGACGCAGCCCATCCTCCAGACGGCTCTACCGTGCCAGATCCTCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp GCTGTGTCTGTCACCAGGCGGGCGGTCCCTTCCACGTaGTTCTCGGGGGTGATCTCCTCGGGCTTCTTGGGC +
Preference number: 6 (lower is better)
Translates to: AVSVTRRAVPST*FSGVISSGFLG
Trigger: GCCCAAGAAGCCCGAGGAGATCACCCCCGAGAACCACGTGGAAGGGACCGCCCGCCTGGTGACAGACACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TCCACAACGCTCGACTCCTCGTTCTCGTCGCTACCCTaGCCGTCCCGGCTGCTGCCCTCTGACCGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: STTLDSSFSSLP*PSRLLPSDRSE
Trigger: CTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCCAGGGTAGCGACGAGAACGAGGAGTCGAGCGTTGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp CCAGGCGGGCGGTCCCTTCCACGTGGTTCTCGGGGGTaGTCTCCTCGGGCTTCTTGGGCACCTTCTTGGCAT +
Preference number: 6 (lower is better)
Translates to: PGGRSLPRGSRG*SPRASWAPSWH
Trigger: ATGCCAAGAAGGTGCCCAAGAAGCCCGAGGAGATCACCCCCGAGAACCACGTGGAAGGGACCGCCCGCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp GGCCTGGCCAGCCTCTGCAGGGACGCAGTCGGAGTCTaGTTCAGCCAGTTCCGACACACCTTCTGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: GLASLCRDAVGV*FSQFRHTFCRS
Trigger: GCTGCGGCAGAAGGTGTGTCGGAACTGGCTGAATCAGACTCCGACTGCGTCCCTGCAGAGGCTGGCCAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TGGAGGATGGGCTGCGTCACCTTTGTGGGGGCCAACTaGGCGGGCAGCACAGTGATGGTCGGGGGTACTGAC +
Preference number: 6 (lower is better)
Translates to: WRMGCVTFVGAN*AGSTVMVGGTD
Trigger: GTCAGTACCCCCGACCATCACTGTGCTGCCCGCCCAGTTGGCCCCCACAAAGGTGACGCAGCCCATCCTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp CTAGTCTGGCCGAGGATCTGGCACGGTAGAGCCGTCTaGAGGATGGGCTGCGTCACCTTTGTGGGGGCCAAC +
Preference number: 6 (lower is better)
Translates to: LVWPRIWHGRAV*RMGCVTFVGAN
Trigger: GTTGGCCCCCACAAAGGTGACGCAGCCCATCCTCCAGACGGCTCTACCGTGCCAGATCCTCGGCCAGACTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp GGCCGTCCCGGCTGCTGCCCTCTGACCGGTCTGAGGTaGCCTCTGAGGGCTTTGCTGGCAAACAGTCTTTTG +
Preference number: 6 (lower is better)
Translates to: GRPGCCPLTGLR*PLRALLANSLL
Trigger: CAAAAGACTGTTTGCCAGCAAAGCCCTCAGAGGCCACCTCAGACCGGTCAGAGGGCAGCAGCCGGGACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp CGACCGTGTCGGGAGGCCGCGATGGCCAACTGGTCTTaGGCAAGGGATTCGCTGGTGATGTGGACGATGCCC +
Preference number: 6 (lower is better)
Translates to: RPCREAAMANWS*ARDSLVMWTMP
Trigger: GGGCATCGTCCACATCACCAGCGAATCCCTTGCCAAAGACCAGTTGGCCATCGCGGCCTCCCGACACGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp GGGGAGCAAGAGACGGTTGTTGACCCGCTGGTCACCTaGGTCAGCACCAGGCTAGTCTGGCCGAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: GEQETVVDPLVT*VSTRLVWPRIW
Trigger: CCAGATCCTCGGCCAGACTAGCCTGGTGCTGACTCAGGTGACCAGCGGGTCAACAACCGTCTCTTGCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TGGGCGGGCAGCACAGTGATGGTCGGGGGTACTGACTaGATGGTGCCGTTGAACATCTTCTTCCGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: WAGSTVMVGGTD*MVPLNIFFRAS
Trigger: GGAGGCCCGGAAGAAGATGTTCAACGGCACCATCCAGTCAGTACCCCCGACCATCACTGTGCTGCCCGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TCGGGGGCAGCTTGGGGAGTCACCAAGGGTCTCTTCTaGCCATGGTTGGTGACTCCTGCCACGGCAAGTGTG +
Preference number: 6 (lower is better)
Translates to: SGAAWGVTKGLF*PWLVTPATASV
Trigger: CACACTTGCCGTGGCAGGAGTCACCAACCATGGCCAGAAGAGACCCTTGGTGACTCCCCAAGCTGCCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TACGTGCGACCGTGTCGGGAGGCCGCGATGGCCAACTaGTCTTTGGCAAGGGATTCGCTGGTGATGTGGACG +
Preference number: 6 (lower is better)
Translates to: YVRPCREAAMAN*SLARDSLVMWT
Trigger: CGTCCACATCACCAGCGAATCCCTTGCCAAAGACCAGTTGGCCATCGCGGCCTCCCGACACGGTCGCACGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp CAACTGGGCGGGCAGCACAGTGATGGTCGGGGGTACTaGCTGGATGGTGCCGTTGAACATCTTCTTCCGGGC +
Preference number: 6 (lower is better)
Translates to: QLGGQHSDGRGY*LDGAVEHLLPG
Trigger: GCCCGGAAGAAGATGTTCAACGGCACCATCCAGTCAGTACCCCCGACCATCACTGTGCTGCCCGCCCAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp GCAGCTTGGGGAGTCACCAAGGGTCTCTTCTGGCCATaGTTGGTGACTCCTGCCACGGCAAGTGTGATGGGG +
Preference number: 6 (lower is better)
Translates to: AAWGVTKGLFWP*LVTPATASVMG
Trigger: CCCCATCACACTTGCCGTGGCAGGAGTCACCAACCATGGCCAGAAGAGACCCTTGGTGACTCCCCAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp CTGGGCAGAGAACTTGTTAACTGGGCACCGGAGAGCTaGTCGAGTCGAGACAGAGCACCATTGGGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LGRELVNWAPES*SSRDRAPLGAP
Trigger: GGGAGCCCCCAATGGTGCTCTGTCTCGACTCGACCAGCTCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp CACGGCAAGTGTGATGGGGGAGCAAGAGACGGTTGTTaGCCCGCTGGTCACCTGAGTCAGCACCAGGCTAGT +
Preference number: 6 (lower is better)
Translates to: HGKCDGGARDGC*PAGHLSQHQAS
Trigger: ACTAGCCTGGTGCTGACTCAGGTGACCAGCGGGTCAACAACCGTCTCTTGCTCCCCCATCACACTTGCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp CACCAAGGGTCTCTTCTGGCCATGGTTGGTGACTCCTaGCACGGCAAGTGTGATGGGGGAGCAAGAGACGGT +
Preference number: 6 (lower is better)
Translates to: HQGSLLAMVGDS*HGKCDGGARDG
Trigger: ACCGTCTCTTGCTCCCCCATCACACTTGCCGTGGCAGGAGTCACCAACCATGGCCAGAAGAGACCCTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp ACCAGGCCAGTCTTGGCCGCTAACTGGTCGTACTCCTaGGGAGTAGGCCACTGGGTTCTTGCAAACGTGCTC +
Preference number: 6 (lower is better)
Translates to: TRPVLAANWSYS*GVGHWVLANVL
Trigger: GAGCACGTTTGCAAGAACCCAGTGGCCTACTCCCCAGGAGTACGACCAGTTAGCGGCCAAGACTGGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp CACCCCCGTTCTTTGGGCTCTCGGCCATGGGTTTTGTTGCTTTCCTaGCTACGGCATCGTAGCCGTGATCATCTGCCATGGGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: HPRSLGSRPWVLLLS*LRHRSRDHLPWAGA
Trigger: AGCACCAGCCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp TCCGCCTCTCCGAGAACCAGGAGTCGATCTCTCTCCTaGTCAGCTTGGTCTCCACCCTTAGCCGATCCAGTT +
Preference number: 6 (lower is better)
Translates to: SASPRTRSRSLS*SAWSPPLADPV
Trigger: AACTGGATCGGCTAAGGGTGGAGACCAAGCTGAGCAGGAGAGAGATCGACTCCTGGTTCTCGGAGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp GCGCTGGGTGGCAAACCAGATTCTGATGTGCTCCTCTaGGTGTTTGGAGGCAGCTGTCAGCCAGGACAACTC +
Preference number: 6 (lower is better)
Translates to: ALGGKPDSDVLL*VFGGSCQPGQL
Trigger: GAGTTGTCCTGGCTGACAGCTGCCTCCAAACACCCAGAGGAGCACATCAGAATCTGGTTTGCCACCCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp ATTGCTGGCGAAGGGCTGGGCAGAGAACTTGTTAACTaGGCACCGGAGAGCTGGTCGAGTCGAGACAGAGCA +
Preference number: 6 (lower is better)
Translates to: IAGEGLGRELVN*APESWSSRDRA
Trigger: TGCTCTGTCTCGACTCGACCAGCTCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAGCCCTTCGCCAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp ATCTCAGTTCGGACCAGGCCAGTCTTGGCCGCTAACTaGTCGTACTCCTGGGGAGTAGGCCACTGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: ISVRTRPVLAAN*SYSWGVGHWVL
Trigger: AAGAACCCAGTGGCCTACTCCCCAGGAGTACGACCAGTTAGCGGCCAAGACTGGCCTGGTCCGAACTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TCCTTGCTACGGCATCGTAGCCGTGATCATCTGCCATaGGCTGGTGCTGGTACTGCTCCATCCACTTCACGG +
Preference number: 6 (lower is better)
Translates to: SLLRHRSRDHLP*AGAGTAPSTSR
Trigger: CCGTGAAGTGGATGGAGCAGTACCAGCACCAGCCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp AACCAACGCACAATCTCAGTTCGGACCAGGCCAGTCTaGGCCGCTAACTGGTCGTACTCCTGGGGAGTAGGC +
Preference number: 6 (lower is better)
Translates to: NQRTISVRTRPV*AANWSYSWGVG
Trigger: GCCTACTCCCCAGGAGTACGACCAGTTAGCGGCCAAGACTGGCCTGGTCCGAACTGAGATTGTGCGTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp TTCTCCTTGAACCAACGCACAATCTCAGTTCGGACCAGGCCAGTCTaGGCCGCTAACTGGTCGTACTCCTGGGGAGTAGGCCACTGGGTT +
Preference number: 6 (lower is better)
Translates to: FSLNQRTISVRTRPV*AANWSYSWGVGHWV
Trigger: AACCCAGTGGCCTACTCCCCAGGAGTACGACCAGTTAGCGGCCAAGACTGGCCTGGTCCGAACTGAGATTGTGCGTTGGTTCAAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TTCTGCTGCCCAACTGTCCTTGGCCACGTCAGGCTGTaGTGTGCCGATTCCTTTCTCTTTGGCCCTGTCTAC +
Preference number: 6 (lower is better)
Translates to: FCCPTVLGHVRL*CADSFLFGPVY
Trigger: GTAGACAGGGCCAAAGAGAAAGGAATCGGCACACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CCA 72 bp AGCTGTACAGAAGGCATGACGTGTCCTAATGTGTCTTaGAGGAGCTCCACCCCGCCGAGTCTCGAGAGGATC +
Preference number: 6 (lower is better)
Translates to: SCTEGMTCPNVS*RSSTPPSLERI
Trigger: GATCCTCTCGAGACTCGGCGGGGTGGAGCTCCTCCAAGACACATTAGGACACGTCATGCCTTCTGTACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp TTCCGCCTCTCCGAGAACCAGGAGTCGATCTCTCTCCTGCTCAGCTaGGTCTCCACCCTTAGCCGATCCAGTTCTGCTTGGGTAGGAAAA +
Preference number: 6 (lower is better)
Translates to: FRLSENQESISLLLS*VSTLSRSSSAWVGK
Trigger: TTTTCCTACCCAAGCAGAACTGGATCGGCTAAGGGTGGAGACCAAGCTGAGCAGGAGAGAGATCGACTCCTGGTTCTCGGAGAGGCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp GAACCACATCACCCCCGTTCTTTGGGCTCTCGGCCATGGGTTTTGTaGCTTTCCTTGCTACGGCATCGTAGCCGTGATCATCTGCCATGG +
Preference number: 6 (lower is better)
Translates to: EPHHPRSLGSRPWVL*LSLLRHRSRDHLPW
Trigger: CCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGTGATGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp GTGGAACCACATCACCCCCGTTCTTTGGGCTCTCGGCCATGGGTTTaGTTGCTTTCCTTGCTACGGCATCGTAGCCGTGATCATCTGCCA +
Preference number: 6 (lower is better)
Translates to: VEPHHPRSLGSRPWV*LLSLLRHRSRDHLP
Trigger: TGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGTGATGTGGTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp ACCGGTCTGAGGTGGCCTCTGAGGGCTTTGCTGGCAAACAGTCTTTaGCTGGCTCGCTGCCTACTTTTACCCTGGTCACCAACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: TGLRWPLRALLANSL*LARCLLLPWSPTSP
Trigger: TGGAGAAGTTGGTGACCAGGGTAAAAGTAGGCAGCGAGCCAGCAAAAGACTGTTTGCCAGCAAAGCCCTCAGAGGCCACCTCAGACCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp CGATGGCCAACTGGTCTTTGGCAAGGGATTCGCTGGTaGTGTGGACGATGCCCCTTTGACACCGATATCGGT +
Preference number: 6 (lower is better)
Translates to: RWPTGLWQGIRW*CGRCPFDTDIG
Trigger: ACCGATATCGGTGTCAAAGGGGCATCGTCCACATCACCAGCGAATCCCTTGCCAAAGACCAGTTGGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp CTGGTCGTACTCCTGGGGAGTAGGCCACTGGGTTCTTaGAAACGTGCTCCTCAGGAGATGAACCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: LVVLLGSRPLGS*KRAPQEMNLFL
Trigger: CAAGAACAGGTTCATCTCCTGAGGAGCACGTTTGCAAGAACCCAGTGGCCTACTCCCCAGGAGTACGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp TGCTTTCCTTGCTACGGCATCGTAGCCGTGATCATCTaGCATGGGCTGGTGCTGGTACTGCTCCATCCACTT +
Preference number: 6 (lower is better)
Translates to: CFPCYGIVAVII*HGLVLVLLHPL
Trigger: AAGTGGATGGAGCAGTACCAGCACCAGCCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp CTTTGGGCTCTCGGCCATGGGTTTTGTTGCTTTCCTTaGTACGGCATCGTAGCCGTGATCATCTGCCATGGG +
Preference number: 6 (lower is better)
Translates to: LWALGHGFCCFP*YGIVAVIICHG
Trigger: CCCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp GAACCACATCACCCCCGTTCTTTGGGCTCTCGGCCATaGGTTTTGTTGCTTTCCTTGCTACGGCATCGTAGC +
Preference number: 6 (lower is better)
Translates to: EPHHPRSLGSRP*VLLLSLLRHRS
Trigger: GCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGTGATGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp GCCACGTCAGGCTGTGGTGTGCCGATTCCTTTCTCTTaGGCCCTGTCTACTTCCTCGGGCACATCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: ATSGCGVPIPFS*ALSTSSGTSCS
Trigger: AGAACAAGATGTGCCCGAGGAAGTAGACAGGGCCAAAGAGAAAGGAATCGGCACACCACAGCCTGACGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 72 bp TTTTTGCAATTGCTGGCGAAGGGCTGGGCAGAGAACTaGTTAACTGGGCACCGGAGAGCTGGTCGAGTCGAG +
Preference number: 6 (lower is better)
Translates to: FLQLLAKGWAEN*LTGHRRAGRVE
Trigger: CTCGACTCGACCAGCTCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAGCCCTTCGCCAGCAATTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp AGGTGGCCTCTGAGGGCTTTGCTGGCAAACAGTCTTTaGCTGGCTCGCTGCCTACTTTTACCCTGGTCACCA +
Preference number: 6 (lower is better)
Translates to: RWPLRALLANSL*LARCLLLPWSP
Trigger: TGGTGACCAGGGTAAAAGTAGGCAGCGAGCCAGCAAAAGACTGTTTGCCAGCAAAGCCCTCAGAGGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp GTTCTTGACTTTTTGCAATTGCTGGCGAAGGGCTGGGCAGAGAACTaGTTAACTGGGCACCGGAGAGCTGGTCGAGTCGAGACAGAGCAC +
Preference number: 6 (lower is better)
Translates to: VLDFLQLLAKGWAEN*LTGHRRAGRVETEH
Trigger: GTGCTCTGTCTCGACTCGACCAGCTCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAGCCCTTCGCCAGCAATTGCAAAAAGTCAAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp GAATCACGTTGGGATGCTGCATGTCGACATGCTCCGTaGACTCGTTCAGGTTTTGCGTGGAGTAGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: ESRWDAACRHAP*TRSGFAWSRGS
Trigger: ACTGCCCCTACTCCACGCAAAACCTGAACGAGTTCACGGAGCATGTCGACATGCAGCATCCCAACGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS TCA 72 bp CAGAATCACTGTCACCAGTTCCAGGGCCACTGGTGGTaGTGGACACGACATGGTTGGTGGTTTCGATGGACT +
Preference number: 6 (lower is better)
Translates to: QNHCHQFQGHWW*WTRHGWWFRWT
Trigger: AGTCCATCGAAACCACCAACCATGTCGTGTCCATCACCACCAGTGGCCCTGGAACTGGTGACAGTGATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp GCAAGGGATTCGCTGGTGATGTGGACGATGCCCCTTTaGCACCGATATCGGTGGTCACTGAACCACTTCTTG +
Preference number: 6 (lower is better)
Translates to: ARDSLVMWTMPL*HRYRWSLNHFL
Trigger: CAAGAAGTGGTTCAGTGACCACCGATATCGGTGTCAAAGGGGCATCGTCCACATCACCAGCGAATCCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp GATTCAGCCAGTTCCGACACACCTTCTGCCGCAGCCTaGCTCCAGCTATCTGATCTATCTGAGATCGCATCC +
Preference number: 6 (lower is better)
Translates to: DSASSDTPSAAA*LQLSDLSEIAS
Trigger: GGATGCGATCTCAGATAGATCAGATAGCTGGAGTCAGGCTGCGGCAGAAGGTGTGTCGGAACTGGCTGAATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp TGGCTCTGGAGAAAGCTGGCCTTGAGATGTGCTATCTaGTCCTTTGTCTTCTTGCGGTCACTGGCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: WLWRKLALRCAI*SFVFLRSLAGV
Trigger: CACACCAGCCAGTGACCGCAAGAAGACAAAGGAGCAGATAGCACATCTCAAGGCCAGCTTTCTCCAGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp CCAGTTCCAGGGCCACTGGTGGTGATGGACACGACATaGTTGGTGGTTTCGATGGACTGTTCCAAGACAGTT +
Preference number: 6 (lower is better)
Translates to: PVPGPLVVMDTT*LVVSMDCSKTV
Trigger: AACTGTCTTGGAACAGTCCATCGAAACCACCAACCATGTCGTGTCCATCACCACCAGTGGCCCTGGAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp GCATCGTCAGGGAACTGGCTCTGGAGAAAGCTGGCCTaGAGATGTGCTATCTGCTCCTTTGTCTTCTTGCGG +
Preference number: 6 (lower is better)
Translates to: ASSGNWLWRKLA*RCAICSFVFLR
Trigger: CCGCAAGAAGACAAAGGAGCAGATAGCACATCTCAAGGCCAGCTTTCTCCAGAGCCAGTTCCCTGACGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp GGCAAGGGATTCGCTGGTGATGTGGACGATGCCCCTTaGACACCGATATCGGTGGTCACTGAACCACTTCTT +
Preference number: 6 (lower is better)
Translates to: GKGFAGDVDDAP*TPISVVTEPLL
Trigger: AAGAAGTGGTTCAGTGACCACCGATATCGGTGTCAAAGGGGCATCGTCCACATCACCAGCGAATCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp TCTTTGGGCTCTCGGCCATGGGTTTTGTTGCTTTCCTaGCTACGGCATCGTAGCCGTGATCATCTGCCATGG +
Preference number: 6 (lower is better)
Translates to: SLGSRPWVLLLS*LRHRSRDHLPW
Trigger: CCATGGCAGATGATCACGGCTACGATGCCGTAGCAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp CTGTCCTTGGCCACGTCAGGCTGTGGTGTGCCGATTCCTTTCTCTTaGGCCCTGTCTACTTCCTCGGGCACATCTTGTTCTACTACTTGT +
Preference number: 6 (lower is better)
Translates to: LSLATSGCGVPIPFS*ALSTSSGTSCSTTC
Trigger: ACAAGTAGTAGAACAAGATGTGCCCGAGGAAGTAGACAGGGCCAAAGAGAAAGGAATCGGCACACCACAGCCTGACGTGGCCAAGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 90 bp CTGGTCTTTGGCAAGGGATTCGCTGGTGATGTGGACGATGCCCCTTaGACACCGATATCGGTGGTCACTGAACCACTTCTTGATCTCGCT +
Preference number: 6 (lower is better)
Translates to: LVFGKGFAGDVDDAP*TPISVVTEPLLDLA
Trigger: AGCGAGATCAAGAAGTGGTTCAGTGACCACCGATATCGGTGTCAAAGGGGCATCGTCCACATCACCAGCGAATCCCTTGCCAAAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp TCCATCCACTTCACGGTTCCCGTTTTCAGCAAGCATCTGTTCTCCTaGAACCAACGCACAATCTCAGTTCGGACCAGGCCAGTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SIHFTVPVFSKHLFS*NQRTISVRTRPVLA
Trigger: GGCCAAGACTGGCCTGGTCCGAACTGAGATTGTGCGTTGGTTCAAGGAGAACAGATGCTTGCTGAAAACGGGAACCGTGAAGTGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp CATCGTCAGGGAACTGGCTCTGGAGAAAGCTGGCCTTaGGATGTGCTATCTGCTCCTTTGTCTTCTTGCGGT +
Preference number: 6 (lower is better)
Translates to: HRQGTGSGESWP*DVLSAPLSSCG
Trigger: ACCGCAAGAAGACAAAGGAGCAGATAGCACATCTCAAGGCCAGCTTTCTCCAGAGCCAGTTCCCTGACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp TCACGGTTCCCGTTTTCAGCAAGCATCTGTTCTCCTTaGACCAACGCACAATCTCAGTTCGGACCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SRFPFSASICSP*TNAQSQFGPGQ
Trigger: CTGGCCTGGTCCGAACTGAGATTGTGCGTTGGTTCAAGGAGAACAGATGCTTGCTGAAAACGGGAACCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TGGAAGAGTTTTCAAGTTCTGCTGCCCAACTGTCCTTaGCCACGTCAGGCTGTGGTGTGCCGATTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: WKSFQVLLPNCP*PRQAVVCRFLS
Trigger: AGAAAGGAATCGGCACACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAACTTGAAAACTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CCA 72 bp CCTGTTCTTGACTTTTTGCAATTGCTGGCGAAGGGCTaGGCAGAGAACTTGTTAACTGGGCACCGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: PVLDFLQLLAKG*AENLLTGHRRA
Trigger: AGCTCTCCGGTGCCCAGTTAACAAGTTCTCTGCCCAGCCCTTCGCCAGCAATTGCAAAAAGTCAAGAACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp TTGGAAGAGTTTTCAAGTTCTGCTGCCCAACTGTCCTaGGCCACGTCAGGCTGTGGTGTGCCGATTCCTTTC +
Preference number: 6 (lower is better)
Translates to: LEEFSSSAAQLS*ATSGCGVPIPF
Trigger: GAAAGGAATCGGCACACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAACTTGAAAACTCTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 72 bp AGCTTGAAGTTGGCCTCCCCGGGATGGAACTTGGAGTaGTGGTCGGATAGGGAGTCGTACTTTTTGGTTGTG +
Preference number: 6 (lower is better)
Translates to: SLKLASPGWNLE*WSDRESYFLVV
Trigger: CACAACCAAAAAGTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 90 bp GTTGGGATGCTGCATGTCGACATGCTCCGTGAACTCGTTCAGGTTTaGCGTGGAGTAGGGGCAGTATTTGCACTCATAACCACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: VGMLHVDMLRELVQV*RGVGAVFALITTLE
Trigger: CTCCAAGGTGGTTATGAGTGCAAATACTGCCCCTACTCCACGCAAAACCTGAACGAGTTCACGGAGCATGTCGACATGCAGCATCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 90 bp TCGTTTTCTTTGGAAGAGTTTTCAAGTTCTGCTGCCCAACTGTCCTaGGCCACGTCAGGCTGTGGTGTGCCGATTCCTTTCTCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: SFSLEEFSSSAAQLS*ATSGCGVPIPFSLA
Trigger: GGCCAAAGAGAAAGGAATCGGCACACCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAACTTGAAAACTCTTCCAAAGAAAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CCA 72 bp TTGAAGTTGGCCTCCCCGGGATGGAACTTGGAGTTGTaGTCGGATAGGGAGTCGTACTTTTTGGTTGTGAAG +
Preference number: 6 (lower is better)
Translates to: LKLASPGWNLEL*SDRESYFLVVK
Trigger: CTTCACAACCAAAAAGTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CCA 72 bp AACAGTCTTTTGCTGGCTCGCTGCCTACTTTTACCCTaGTCACCAACTTCTCCAAGTCCTCTTCGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: NSLLLARCLLLP*SPTSPSPLRRA
Trigger: AGCTCTGCGAAGAGGACTTGGAGAAGTTGGTGACCAGGGTAAAAGTAGGCAGCGAGCCAGCAAAAGACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp CTGCATGTCGACATGCTCCGTGAACTCGTTCAGGTTTaGCGTGGAGTAGGGGCAGTATTTGCACTCATAACC +
Preference number: 6 (lower is better)
Translates to: LHVDMLRELVQV*RGVGAVFALIT
Trigger: GGTTATGAGTGCAAATACTGCCCCTACTCCACGCAAAACCTGAACGAGTTCACGGAGCATGTCGACATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 72 bp AACTTCAGCTTGAAGTTGGCCTCCCCGGGATGGAACTaGGAGTTGTGGTCGGATAGGGAGTCGTACTTTTTG +
Preference number: 6 (lower is better)
Translates to: NFSLKLASPGWN*ELWSDRESYFL
Trigger: CAAAAAGTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGCTGAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 72 bp TTCACGGTTCCCGTTTTCAGCAAGCATCTGTTCTCCTaGAACCAACGCACAATCTCAGTTCGGACCAGGCCA +
Preference number: 6 (lower is better)
Translates to: FTVPVFSKHLFS*NQRTISVRTRP
Trigger: TGGCCTGGTCCGAACTGAGATTGTGCGTTGGTTCAAGGAGAACAGATGCTTGCTGAAAACGGGAACCGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp TTAATTAACTTCAGCTTGAAGTTGGCCTCCCCGGGATaGAACTTGGAGTTGTGGTCGGATAGGGAGTCGTAC +
Preference number: 6 (lower is better)
Translates to: LINFSLKLASPG*NLELWSDRESY
Trigger: GTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGCTGAAGTTAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 72 bp GTAGTATTTAGTGGGACAGGGACCTTGGGCACAAGGTaGATATTTGGTGGCAGCTGTACAGAAGGCATGACG +
Preference number: 6 (lower is better)
Translates to: VVFSGTGTLGTR*IFGGSCTEGMT
Trigger: CGTCATGCCTTCTGTACAGCTGCCACCAAATATCAACCTTGTGCCCAAGGTCCCTGTCCCACTAAATACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp CCTTGTAATATTGTGGAACCACATCACCCCCGTTCTTaGGGCTCTCGGCCATGGGTTTTGTTGCTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: PCNIVEPHHPRS*GSRPWVLLLSL
Trigger: CAAGGAAAGCAACAAAACCCATGGCCGAGAGCCCAAAGAACGGGGGTGATGTGGTTCCACAATATTACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp GACCATCTCTTCTTTCTTCAAAGACGGAGCGTCCCGTaGATCAGCACAGCAGTTCTAACAGACTTCCCTGTC +
Preference number: 6 (lower is better)
Translates to: DHLFFLQRRSVP*ISTAVLTDFPV
Trigger: GACAGGGAAGTCTGTTAGAACTGCTGTGCTGATCAACGGGACGCTCCGTCTTTGAAGAAAGAAGAGATGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp TCCAGGGCAGAGTTGTATTTGGTAGTATTTAGTGGGACAGGGACCTaGGGCACAAGGTTGATATTTGGTGGCAGCTGTACAGAAGGCATG +
Preference number: 6 (lower is better)
Translates to: SRAELYLVVFSGTGT*GTRLIFGGSCTEGM
Trigger: CATGCCTTCTGTACAGCTGCCACCAAATATCAACCTTGTGCCCAAGGTCCCTGTCCCACTAAATACTACCAAATACAACTCTGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS GCA 72 bp TATCACTTCGTTTTCTTTGGAAGAGTTTTCAAGTTCTaGTGCCCAACTGTCCTTGGCCACGTCAGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: YHFVFFGRVFKF*CPTVLGHVRLW
Trigger: CCACAGCCTGACGTGGCCAAGGACAGTTGGGCAGCAGAACTTGAAAACTCTTCCAAAGAAAACGAAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 72 bp GATGTCCGAACCATGCATGGAGTTGTAGATTTTCGTTaGCTAGCCATGCTGCCTGTCTGTGTGCAATGGCTT +
Preference number: 6 (lower is better)
Translates to: DVRTMHGVVDFR*LAMLPVCVQWL
Trigger: AAGCCATTGCACACAGACAGGCAGCATGGCTAGCAAACGAAAATCTACAACTCCATGCATGGTTCGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 90 bp CGTTTAATTAACTTCAGCTTGAAGTTGGCCTCCCCGGGATGGAACTaGGAGTTGTGGTCGGATAGGGAGTCGTACTTTTTGGTTGTGAAG +
Preference number: 6 (lower is better)
Translates to: RLINFSLKLASPGWN*ELWSDRESYFLVVK
Trigger: CTTCACAACCAAAAAGTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGCTGAAGTTAATTAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 90 bp ATTAACTTCAGCTTGAAGTTGGCCTCCCCGGGATGGAACTTGGAGTaGTGGTCGGATAGGGAGTCGTACTTTTTGGTTGTGAAGTTACAT +
Preference number: 6 (lower is better)
Translates to: INFSLKLASPGWNLE*WSDRESYFLVVKLH
Trigger: ATGTAACTTCACAACCAAAAAGTACGACTCCCTATCCGACCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGCTGAAGTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 90 bp TTGTTGAAAGAGTTGATCATCGTGGCATTTGTATCCAGGGCAGAGTaGTATTTGGTAGTATTTAGTGGGACAGGGACCTTGGGCACAAGG +
Preference number: 6 (lower is better)
Translates to: LLKELIIVAFVSRAE*YLVVFSGTGTLGTR
Trigger: CCTTGTGCCCAAGGTCCCTGTCCCACTAAATACTACCAAATACAACTCTGCCCTGGATACAAATGCCACGATGATCAACTCTTTCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS TCA 72 bp GTCTACTTCCTCGGGCACATCTTGTTCTACTACTTGTaGTGTCCGAACCATGCATGGAGTTGTAGATTTTCG +
Preference number: 6 (lower is better)
Translates to: VYFLGHILFYYL*CPNHAWSCRFS
Trigger: CGAAAATCTACAACTCCATGCATGGTTCGGACATCACAAGTAGTAGAACAAGATGTGCCCGAGGAAGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 72 bp GAGTTGTATTTGGTAGTATTTAGTGGGACAGGGACCTaGGGCACAAGGTTGATATTTGGTGGCAGCTGTACA +
Preference number: 6 (lower is better)
Translates to: ELYLVVFSGTGT*GTRLIFGGSCT
Trigger: TGTACAGCTGCCACCAAATATCAACCTTGTGCCCAAGGTCCCTGTCCCACTAAATACTACCAAATACAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 72 bp GAGTTGATCATCGTGGCATTTGTATCCAGGGCAGAGTaGTATTTGGTAGTATTTAGTGGGACAGGGACCTTG +
Preference number: 6 (lower is better)
Translates to: ELIIVAFVSRAE*YLVVFSGTGTL
Trigger: CAAGGTCCCTGTCCCACTAAATACTACCAAATACAACTCTGCCCTGGATACAAATGCCACGATGATCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CAA 90 bp ACTACTTGTGATGTCCGAACCATGCATGGAGTTGTAGATTTTCGTTaGCTAGCCATGCTGCCTGTCTGTGTGCAATGGCTTATTTTTGGA +
Preference number: 6 (lower is better)
Translates to: TTCDVRTMHGVVDFR*LAMLPVCVQWLIFG
Trigger: TCCAAAAATAAGCCATTGCACACAGACAGGCAGCATGGCTAGCAAACGAAAATCTACAACTCCATGCATGGTTCGGACATCACAAGTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS CAA 90 bp AAAGAGTTGATCATCGTGGCATTTGTATCCAGGGCAGAGTTGTATTaGGTAGTATTTAGTGGGACAGGGACCTTGGGCACAAGGTTGATA +
Preference number: 6 (lower is better)
Translates to: KELIIVAFVSRAELY*VVFSGTGTLGTRLI
Trigger: TATCAACCTTGTGCCCAAGGTCCCTGTCCCACTAAATACTACCAAATACAACTCTGCCCTGGATACAAATGCCACGATGATCAACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314393.6
CDS CCA 72 bp GAAAGGCTTTTGGCTTTATTCCCCCTCAAATGGCTTTaGCTTTCCTTGTGTGCTGAAGTCTACTGTTTGAGT +
Preference number: 6 (lower is better)
Translates to: ERLLALFPLKWL*LSLCAEVYCLS
Trigger: ACTCAAACAGTAGACTTCAGCACACAAGGAAAGCCAAAGCCATTTGAGGGGGAATAAAGCCAAAAGCCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1
CDS TCA 72 bp TGGTTGGTGGTTTCGATGGACTGTTCCAAGACAGTTTaGTTATTGCGTTTAATTAACTTCAGCTTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: WLVVSMDCSKTV*LLRLINFSLKL
Trigger: CAACTTCAAGCTGAAGTTAATTAAACGCAATAATCAAACTGTCTTGGAACAGTCCATCGAAACCACCAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314393.6
ENST00000534247.1