RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZHX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000165156

Ensembl transcript IDs: ENST00000297857.3, ENST00000395571.8, ENST00000480132.6, ENST00000522595.5, ENST00000522655.5, ENST00000524267.5, ENST00000602651.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAAACTGATACAACAAGGTaGCTGTTCAAAATGTATGTG +
Preference number: 2 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKTDTTR*LFKMYV
Trigger: CACATACATTTTGAACAGTCACCTTGTTGTATCAGT...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602651.1
3UTR-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTTGGGTATTGGATCCTaGTTTTTGAGTGTGTATGCC +
Preference number: 2 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFLGIGS*FLSVYA
Trigger: GGCATACACACTCAAAAAGCAGGATCCAATACCCAA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
3UTR-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGTGTTCTATTTACATTaGAGAACTTCCACCAACTGC +
Preference number: 2 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFVFYLH*RTSTNC
Trigger: GCAGTTGGTGGAAGTTCTGCAATGTAAATAGAACAC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
3UTR-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATCAGACATCTTGAGTTaGAGAATTGATTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: TTLSSISFGYWILLFECVSDILS*RIDSPS
Trigger: TGAAGGAGAATCAATTCTTCAACTCAAGATGTCTGA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
3UTR-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCATACAGTATTAAACTaGACTGAATATGAGGACAAG +
Preference number: 2 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNHTVLN*TEYEDK
Trigger: CTTGTCCTCATATTCAGTCCAGTTTAATACTGTATG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
3UTR-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTAGTGTTCTATTTACATaGCAGAACTTCCACCAACTG +
Preference number: 3 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFSVLFT*QNFHQL
Trigger: CAGTTGGTGGAAGTTCTGCAATGTAAATAGAACACT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGCTCGCGCCACTACCTaGAGGGGCCGCCGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECARATT*RGRRAS
Trigger: AGAGGCGCGGCGGCCCCTGCAGGTAGTGGCGCGAGC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGCCGGCCGCGGACTCTaGGCTCCAGTTCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNAGRGL*APVPTR
Trigger: GCGGGTGGGAACTGGAGCGCAGAGTCCGCGGCCGGC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTGTGGGGACTCAGGGTaGGGGTGCGAGGAGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECCGDSG*GCEERR
Trigger: GCGCCTCTCCTCGCACCCCCACCCTGAGTCCCCACA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTGGCCCCGCGGAGTGTaGGGACTCAGGGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILWPRGV*GLRVGV
Trigger: CACCCCCACCCTGAGTCCCCACACTCCGCGGGGCCA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGCCTCAGCAGCTCGGTaGCCCCGCGGAGTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFASAAR*PRGVWG
Trigger: TCCCCACACTCCGCGGGGCCACCGAGCTGCTGAGGC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCCACACGCCGGGCCTTaGACGCTCGAGCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILPHAGP*TLERSW
Trigger: CCAGGAGCGCTCGAGCGTCCAAGGCCCGGCGTGTGG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCTTCTCCCTCCAGCTaGTCCACACGCCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECSSPSS*STRRAL
Trigger: CAAGGCCCGGCGTGTGGAGCAGCTGGAGGGAGAAGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATCTTCTCCTTTCCCGTaGCGGCCGCGGACTCTGCGC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVSSPFP*RPRTLR
Trigger: GCGCAGAGTCCGCGGCCGGCACGGGAAAGGAGAAGA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTCGCGGACCCTTTGTaGAGAGCTCCGCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVADPL*RAPLSH
Trigger: GTGGCTCAGCGGAGCTCTGCACAAAGGGTCCGCGAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATACGCCGCCGCCATCTTaGATTTCAAACCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNTPPPS*ISNRLH
Trigger: GTGCAGCCGGTTTGAAATGCAAGATGGCGGCGGCGT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAATCCCCTCAACCTGCCTaGCAGTCTCCCTTCATAGAG +
Preference number: 4 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKSPQPA*QSPFIE
Trigger: CTCTATGAAGGGAGACTGGCAGGCAGGTTGAGGGGA...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602651.1
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCTCTTCCCCGTCCTTTaGGTCTCCCTCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECLFPVL*VSLSLF
Trigger: AAAGAGGGAGAGGGAGACCCAAAGGACGGGGAAGAG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTTTGTTCCAGCCACTTaGGTAAGGACCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECFVPAT*VRTRPG
Trigger: GCCTGGTCTGGTCCTTACTCAAGTGGCTGGAACAAA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCTTGCCTGTACTCCCTaGCTTAGGTGCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECLACTP*LRCTRF
Trigger: GAATCTGGTGCACCTAAGTCAGGGAGTACAGGCAAG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGACGCCGCCGCCATCTTaGATTTCAAACCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILTPPPS*ISNRLH
Trigger: GTGCAGCCGGTTTGAAATGCAAGATGGCGGCGGCGT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTCAACTCTGACCTGTaGACCCTAAACCCGGAACCG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVNSDL*TLNPEP
Trigger: CGGTTCCGGGTTTAGGGTTCACAGGTCAGAGTTGAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTCAGGGAGTCAACTCTaGCCTGTGAACCCTAAACCC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSGSQL*PVNPKP
Trigger: GGGTTTAGGGTTCACAGGTCAGAGTTGACTCCCTGA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTCATACTCTTCTGGTaGTGGCCACTGTGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVILFW*WPLCPD
Trigger: GTCCGGACACAGTGGCCATCACCAGAAGAGTATGAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGTCATACTCTTCTGGTaGTGGCCACTGTGTCCGGAC +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFVILFW*WPLCPD
Trigger: GTCCGGACACAGTGGCCATCACCAGAAGAGTATGAC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCTGCAAACCACTCTCTaGCCTGCTCATAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECLQTTL*PAHSPY
Trigger: ATATGGGCTATGAGCAGGTCAGAGAGTGGTTTGCAG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCTGGTGTCACTACCGTaGTGGCAGTACTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECLVSLP*WQYLDV
Trigger: TACATCCAAGTACTGCCAGCACGGTAGTGACACCAG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTGCTGGCTTTGTTTCTaGAGTAGGCTGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNCWLCF*SRLSSR
Trigger: CCTGCTGCTCAGCCTACTGCAGAAACAAAGCCAGCA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGGATTGCTTAGGCTGTaGAGTACCAACAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECGLLRL*STNSWG
Trigger: TCCCCAACTGTTGGTACTGCACAGCCTAAGCAATCC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAGGAAGAACTGCTGCTaGTGTCACTACCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVRKNCC*CHYRAG
Trigger: GCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGGAAGAACTGCTGCTaGTGTCACTACCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILRKNCC*CHYRAG
Trigger: GCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACTCTTCCCCGTCCTTTaGGTCTCCCTCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLFPVL*VSLSLF
Trigger: AAAGAGGGAGAGGGAGACCCAAAGGACGGGGAAGAG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTCTTCCCCGTCCTTTaGGTCTCCCTCTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLFPVL*VSLSLF
Trigger: AAAGAGGGAGAGGGAGACCCAAAGGACGGGGAAGAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCCGTTTCACATGTCGTaGAGGTTCCCAAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECPFHMS*RFPSVT
Trigger: AGTGACACTTGGGAACCTCCACGACATGTGAAACGG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAACCGTTTCACATGTCGTaGAGGTTCCCAAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKPFHMS*RFPSVT
Trigger: AGTGACACTTGGGAACCTCCACGACATGTGAAACGG...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602651.1
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGGACCAGACCAGGCTaGCCAACTATTTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILRTRPG*PTIWHV
Trigger: GACATGCCAAATAGTTGGTCAGCCTGGTCTGGTCCT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTAGGACCAGACCAGGCTaGCCAACTATTTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFRTRPG*PTIWHV
Trigger: GACATGCCAAATAGTTGGTCAGCCTGGTCTGGTCCT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTTGTTCCAGCCACTTaGGTAAGGACCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVFVPAT*VRTRPG
Trigger: GCCTGGTCTGGTCCTTACTCAAGTGGCTGGAACAAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTGCCCGAATGCCAAATaGATCAGGGTTTACCAATGC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECCPNAK*IRVYQC
Trigger: GCATTGGTAAACCCTGATTCATTTGGCATTCGGGCA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACTTGCCTGTACTCCCTaGCTTAGGTGCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLACTP*LRCTRF
Trigger: GAATCTGGTGCACCTAAGTCAGGGAGTACAGGCAAG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTTGCCTGTACTCCCTaGCTTAGGTGCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLACTP*LRCTRF
Trigger: GAATCTGGTGCACCTAAGTCAGGGAGTACAGGCAAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAGCCAGCTGTCTGAGTaGGGAAATCAGCTACATTGC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSQLSE*GNQLHC
Trigger: GCAATGTAGCTGATTTCCTCACTCAGACAGCTGGCT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCCAGGAAGAACTGCTaGTGGTGTCACTACCGTGCT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSRKNC*WCHYRA
Trigger: AGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATCCAGGAAGAACTGCTaGTGGTGTCACTACCGTGCT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVSRKNC*WCHYRA
Trigger: AGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATGCTGGCTTTGTTTCTaGAGTAGGCTGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVCWLCF*SRLSSR
Trigger: CCTGCTGCTCAGCCTACTGCAGAAACAAAGCCAGCA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTGCACCAGATTCATCTaGAGGAGAAGTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECCTRFI*RRSFSS
Trigger: GCTGGAGAAACTTCTCCTGCAGATGAATCTGGTGCA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTGTCACTACCGTGCTaGCAGTACTTGGATGTATTC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECVSLPC*QYLDVF
Trigger: GAATACATCCAAGTACTGCCAGCACGGTAGTGACAC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTGCAGTACCAACAGTTaGGGATTCCGTGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECCSTNS*GFRGFI
Trigger: GATGAAACCACGGAATCCCCAACTGTTGGTACTGCA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCCGTTTCACATGTCGTaGAGGTTCCCAAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNPFHMS*RFPSVT
Trigger: AGTGACACTTGGGAACCTCCACGACATGTGAAACGG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGCCTGCTTGCCATTCTaGTGTTATGAGGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNACLPF*CYEEKL
Trigger: GAGCTTTTCCTCATAACATCAGAATGGCAAGCAGGC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACTGCAAACCACTCTCTaGCCTGCTCATAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLQTTL*PAHSPY
Trigger: ATATGGGCTATGAGCAGGTCAGAGAGTGGTTTGCAG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTGCAAACCACTCTCTaGCCTGCTCATAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLQTTL*PAHSPY
Trigger: ATATGGGCTATGAGCAGGTCAGAGAGTGGTTTGCAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGGGTTCTTCCCAATATaGATGAACAGCACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECGFFPI*MNSTSL
Trigger: AAGACTGGTGCTGTTCATTCATATTGGGAAGAACCC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGCCAGCTGTCTGAGTaGGGAAATCAGCTACATTGC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSQLSE*GNQLHC
Trigger: GCAATGTAGCTGATTTCCTCACTCAGACAGCTGGCT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATACAAAGCCAGCTGTCTaGGTGAGGAAATCAGCTACA +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNTKPAV*VRKSAT
Trigger: TGTAGCTGATTTCCTCACTCAGACAGCTGGCTTTGT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTGGTGTCACTACCGTaGTGGCAGTACTTGGATGTA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLVSLP*WQYLDV
Trigger: TACATCCAAGTACTGCCAGCACGGTAGTGACACCAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAGCAGTTATCACCTGTaGCAATCCAGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSSYHL*QSRKNC
Trigger: GCAGTTCTTCCTGGATTGGCACAGGTGATAACTGCT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTGTCAAGGCTATAGGTaGTGTAACTGGCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECCQGYR*CNWQGV
Trigger: AACACCTTGCCAGTTACAGCACCTATAGCCTTGACA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTGACTTGGAACGCCTaGCACTGTCAAGGCTATAGG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLTWNA*HCQGYR
Trigger: CCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTGACTTGGAACGCCTaGCACTGTCAAGGCTATAGG +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLTWNA*HCQGYR
Trigger: CCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTTGAGAAGTTGGAACTaGTGCTGTTGCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECLRSWN*CCCWLC
Trigger: ACAAAGCCAGCAACAGCAGCAGTTCCAACTTCTCAA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGGATTGCTTAGGCTGTaGAGTACCAACAGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVGLLRL*STNSWG
Trigger: TCCCCAACTGTTGGTACTGCACAGCCTAAGCAATCC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGCTGTTGAGAAAACTTaGCTGAAGGACACGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNAVEKT*LKDTKL
Trigger: CAGCTTCGTGTCCTTCAGGCAAGTTTTCTCAACAGC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACTGGATCTTGTTCACTaGCAAGGACCATGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLDLVH*QGPCKV
Trigger: CACCTTGCATGGTCCTTGCCAGTGAACAAGATCCAG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTGGATCTTGTTCACTaGCAAGGACCATGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLDLVH*QGPCKV
Trigger: CACCTTGCATGGTCCTTGCCAGTGAACAAGATCCAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTATAGGTGCTGTAACTaGCAAGGTGTTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECYRCCN*QGVCSS
Trigger: GCTGGAACAAACACCTTGCCAGTTACAGCACCTATA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTGCAGTACCAACAGTTaGGGATTCCGTGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNCSTNS*GFRGFI
Trigger: GATGAAACCACGGAATCCCCAACTGTTGGTACTGCA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCAAGCCCGCTTTCTTTaGCCAACTTGTCATACTCTT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECQARFL*PTCHTL
Trigger: AAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCCGTTTCACATGTCGTaGAGGTTCCCAAGTGTCACT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILPFHMS*RFPSVT
Trigger: AGTGACACTTGGGAACCTCCACGACATGTGAAACGG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACATGCAAGGTGTTGTTaGTTTTCGCCTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVHARCC*FSPACH
Trigger: ATGGCAAGCAGGCGAAAATCAACAACACCTTGCATG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCATGCAAGGTGTTGTTaGTTTTCGCCTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILHARCC*FSPACH
Trigger: ATGGCAAGCAGGCGAAAATCAACAACACCTTGCATG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTACCTTCATCCAAATCTaGTATCAACTCAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECTFIQI*YQLKVW
Trigger: CCAGACCTTGAGTTGATATCAGATTTGGATGAAGGT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAACCTCTTCATCACTTaGGATACTCTCTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNNLFIT*DTLCSG
Trigger: ACCAGAGCAGAGAGTATCTCAAGTGATGAAGAGGTT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGAATCCACAGATTCATaGACCTCTTCATCACTTGAG +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECESTDS*TSSSLE
Trigger: CTCAAGTGATGAAGAGGTTCATGAATCTGTGGATTC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTAGGAACGTCCTCAACTaGGTTATGATGAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECRNVLN*VMMNCN
Trigger: ATTGCAGTTCATCATAACTCAGTTGAGGACGTTCCT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCATGTTTGACACTTTaGGAAGTTGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECSCLTL*EVGTAA
Trigger: AGCAGCAGTTCCAACTTCTCAAAGTGTCAAACATGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTGCCCGAATGCCAAATaGATCAGGGTTTACCAATGC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILCPNAK*IRVYQC
Trigger: GCATTGGTAAACCCTGATTCATTTGGCATTCGGGCA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTGCCCGAATGCCAAATaGATCAGGGTTTACCAATGC +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFCPNAK*IRVYQC
Trigger: GCATTGGTAAACCCTGATTCATTTGGCATTCGGGCA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTGAGAAAACTTGCCTaGAGGACACGAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLRKLA*RTRSCS
Trigger: AGAGCAGCTTCGTGTCCTTCAGGCAAGTTTTCTCAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTTGAGAAAACTTGCCTaGAGGACACGAAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFLRKLA*RTRSCS
Trigger: AGAGCAGCTTCGTGTCCTTCAGGCAAGTTTTCTCAA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAACAAAGCCAGCTGTCTaGGTGAGGAAATCAGCTACA +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVTKPAV*VRKSAT
Trigger: TGTAGCTGATTTCCTCACTCAGACAGCTGGCTTTGT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAATTTAGTATTTGTTTGTaGATCCCCTCAACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKFSICL*IPSTCL
Trigger: CAGGCAGGTTGAGGGGATTCACAAACAAATACTAAA...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602651.1
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGCATTTCAAACCGGCTaGACTTTTCAGGGAGTCAAC +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFAFQTG*TFQGVN
Trigger: GTTGACTCCCTGAAAAGTGCAGCCGGTTTGAAATGC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297857.3
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTACAACTCCAATCACTTaGCACAGCTTCCTTAGCATT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECTTPIT*HSFLSI
Trigger: AATGCTAAGGAAGCTGTGGCAAGTGATTGGAGTTGT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCACTGGCAAGGACCATaGAAGGTGTTGTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNHWQGP*KVLLIF
Trigger: GAAAATCAACAACACCTTGCATGGTCCTTGCCAGTG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAGCAGTTATCACCTGTaGCAATCCAGGAAGAACTGC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVSSYHL*QSRKNC
Trigger: GCAGTTCTTCCTGGATTGGCACAGGTGATAACTGCT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGGGATTGTTATCCAATaGAGCATTGTAGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECGIVIQ*SIVGGN
Trigger: ATTCCCACCTACAATGCTGCATTGGATAACAATCCC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTGTCAAGGCTATAGGTaGTGTAACTGGCAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNCQGYR*CNWQGV
Trigger: AACACCTTGCCAGTTACAGCACCTATAGCCTTGACA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTGGAACTGCTGCTGTTaGTGGCTTTGTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILWNCCC*WLCFCS
Trigger: ACTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTGGAACTGCTGCTGTTaGTGGCTTTGTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFWNCCC*WLCFCS
Trigger: ACTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATGGAACTGCTGCTGTTaGTGGCTTTGTTTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVWNCCC*WLCFCS
Trigger: ACTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTTGAGAAGTTGGAACTaGTGCTGTTGCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNLRSWN*CCCWLC
Trigger: ACAAAGCCAGCAACAGCAGCAGTTCCAACTTCTCAA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGCTGTTGAGAAAACTTaGCTGAAGGACACGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILAVEKT*LKDTKL
Trigger: CAGCTTCGTGTCCTTCAGGCAAGTTTTCTCAACAGC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGCTGTTGAGAAAACTTaGCTGAAGGACACGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVAVEKT*LKDTKL
Trigger: CAGCTTCGTGTCCTTCAGGCAAGTTTTCTCAACAGC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTGCACCAGATTCATCTaGAGGAGAAGTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILCTRFI*RRSFSS
Trigger: GCTGGAGAAACTTCTCCTGCAGATGAATCTGGTGCA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGCACTCTTAAGCATGTaGAGCTGCTCAGGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNALLSM*SCSGVF
Trigger: AAAAACACCTGAGCAGCTGCACATGCTTAAGAGTGC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTGTGTCCGGACAAATaGACTCTTAAGCATGTGCAG +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFLCPDK*TLKHVQ
Trigger: CTGCACATGCTTAAGAGTGCATTTGTCCGGACACAG...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTGTGTCCGGACAAATaGACTCTTAAGCATGTGCAG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLCPDK*TLKHVQ
Trigger: CTGCACATGCTTAAGAGTGCATTTGTCCGGACACAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTTGGGTATTGGATCCTaGTTTTTGAGTGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECLGIGS*FLSVYA
Trigger: GGCATACACACTCAAAAAGCAGGATCCAATACCCAA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTATCAACTCAAGGTCTaGATCTTGTTCACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECYQLKV*ILFTGK
Trigger: CTTGCCAGTGAACAAGATCCAGACCTTGAGTTGATA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGTGTCACTACCGTGCTaGCAGTACTTGGATGTATTC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVVSLPC*QYLDVF
Trigger: GAATACATCCAAGTACTGCCAGCACGGTAGTGACAC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTGTCACTACCGTGCTaGCAGTACTTGGATGTATTC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVSLPC*QYLDVF
Trigger: GAATACATCCAAGTACTGCCAGCACGGTAGTGACAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTATAGGTGCTGTAACTaGCAAGGTGTTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNYRCCN*QGVCSS
Trigger: GCTGGAACAAACACCTTGCCAGTTACAGCACCTATA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGACACTTTGAGAAGTTaGAACTGCTGCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFDTLRS*NCCCCW
Trigger: CCAGCAACAGCAGCAGTTCCAACTTCTCAAAGTGTC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGACACTTTGAGAAGTTaGAACTGCTGCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILDTLRS*NCCCCW
Trigger: CCAGCAACAGCAGCAGTTCCAACTTCTCAAAGTGTC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCAGTTGGGGATTCCGTaGTTTCATCACTGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILQLGIP*FHHWSL
Trigger: TAGACTCCAGTGATGAAACCACGGAATCCCCAACTG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACAGTTGGGGATTCCGTaGTTTCATCACTGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVQLGIP*FHHWSL
Trigger: TAGACTCCAGTGATGAAACCACGGAATCCCCAACTG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTGCAGTACCAACAGTTaGGGATTCCGTGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFCSTNS*GFRGFI
Trigger: GATGAAACCACGGAATCCCCAACTGTTGGTACTGCA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGGAAAAGCTCAGTGGTaGTTAAAAAGCATCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILGKAQW*LKSIEA
Trigger: AGCCTCGATGCTTTTTAATCACCACTGAGCTTTTCC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGGAAAAGCTCAGTGGTaGTTAAAAAGCATCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVGKAQW*LKSIEA
Trigger: AGCCTCGATGCTTTTTAATCACCACTGAGCTTTTCC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAACCTCTTCATCACTTaGGATACTCTCTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILNLFIT*DTLCSG
Trigger: ACCAGAGCAGAGAGTATCTCAAGTGATGAAGAGGTT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGAATCCACAGATTCATaGACCTCTTCATCACTTGAG +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNESTDS*TSSSLE
Trigger: CTCAAGTGATGAAGAGGTTCATGAATCTGTGGATTC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAGGAACGTCCTCAACTaGGTTATGATGAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNRNVLN*VMMNCN
Trigger: ATTGCAGTTCATCATAACTCAGTTGAGGACGTTCCT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTTCTGTATATTATTTTaGCTTGGAACGCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECFCILF*LGTPAT
Trigger: AGTGGCAGGCGTTCCAAGTCAAAATAATATACAGAA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTACCATTCATACTACTTaGATTGGCGCTCTGATAGTA +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECTIHTT*IGALIV
Trigger: TACTATCAGAGCGCCAATTCAAGTAGTATGAATGGT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTTTAAATTTTATGAGTaGTGGTCCCCTGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECFKFYE*WSPVPV
Trigger: AACTGGGACAGGGGACCATCACTCATAAAATTTAAA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCAGATTTCAGTCATCTaGTTTAGACAGCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECQISVI*FRQLPF
Trigger: AAACGGAAGCTGTCTAAATCAGATGACTGAAATCTG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGGGTTCTTCCCAATATaGATGAACAGCACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILGFFPI*MNSTSL
Trigger: AAGACTGGTGCTGTTCATTCATATTGGGAAGAACCC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGAAGAAAGCGCATTTTaGAAAATGGTCCTATGGTCA +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECEESAF*KMVLWS
Trigger: TGACCATAGGACCATTTTTCAAAATGCGCTTTCTTC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGCAGCTTTCTCATGGTaGAATCAAGTAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECAAFSW*NQVKSL
Trigger: TAAGCTCTTTACTTGATTGCACCATGAGAAAGCTGC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCACTGGCAAGGACCATaGAAGGTGTTGTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILHWQGP*KVLLIF
Trigger: GAAAATCAACAACACCTTGCATGGTCCTTGCCAGTG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACACTGGCAAGGACCATaGAAGGTGTTGTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVHWQGP*KVLLIF
Trigger: GAAAATCAACAACACCTTGCATGGTCCTTGCCAGTG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCTGTAGATTCTGCTTaGTCTGCATTCTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECSVDSA*SAFSSL
Trigger: TAAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAACTTCTGTAGATTCTaGTTGCTCTGCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNNFCRF*LLCILL
Trigger: GAGGAGAATGCAGAGCAAGCAGAATCTACAGAAGTT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGGGATTGTTATCCAATaGAGCATTGTAGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNGIVIQ*SIVGGN
Trigger: ATTCCCACCTACAATGCTGCATTGGATAACAATCCC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGAAGTTGGAACTGCTaGTGTTGCTGGCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILRSWNC*CCWLCF
Trigger: GAAACAAAGCCAGCAACAGCAGCAGTTCCAACTTCT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAGAAGTTGGAACTGCTaGTGTTGCTGGCTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVRSWNC*CCWLCF
Trigger: GAAACAAAGCCAGCAACAGCAGCAGTTCCAACTTCT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTGAGAAGTTGGAACTaGTGCTGTTGCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLRSWN*CCCWLC
Trigger: ACAAAGCCAGCAACAGCAGCAGTTCCAACTTCTCAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGCACTCTTAAGCATGTaGAGCTGCTCAGGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFALLSM*SCSGVF
Trigger: AAAAACACCTGAGCAGCTGCACATGCTTAAGAGTGC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGCACTCTTAAGCATGTaGAGCTGCTCAGGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVALLSM*SCSGVF
Trigger: AAAAACACCTGAGCAGCTGCACATGCTTAAGAGTGC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCGTGCTGGCAGTACTTaGATGTATTCTGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECRAGST*MYSVYN
Trigger: ATTGTAAACAGAATACATCCAAGTACTGCCAGCACG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATATAGGTGCTGTAACTaGCAAGGTGTTTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVYRCCN*QGVCSS
Trigger: GCTGGAACAAACACCTTGCCAGTTACAGCACCTATA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCAAGCCCGCTTTCTTTaGCCAACTTGTCATACTCTT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFQARFL*PTCHTL
Trigger: AAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTG...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCAAGCCCGCTTTCTTTaGCCAACTTGTCATACTCTT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILQARFL*PTCHTL
Trigger: AAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTACCTTCATCCAAATCTaGTATCAACTCAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFTFIQI*YQLKVW
Trigger: CCAGACCTTGAGTTGATATCAGATTTGGATGAAGGT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGAATCCACAGATTCATaGACCTCTTCATCACTTGAG +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFESTDS*TSSSLE
Trigger: CTCAAGTGATGAAGAGGTTCATGAATCTGTGGATTC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGGAACGTCCTCAACTaGGTTATGATGAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILRNVLN*VMMNCN
Trigger: ATTGCAGTTCATCATAACTCAGTTGAGGACGTTCCT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCTTCACGGTCTGGTTTaGTTTCATTCTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNLHGLV*FHSLSL
Trigger: AAGAGAAAGAGAATGAAATCAAACCAGACCGTGAAG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTCATGTTTGACACTTTaGGAAGTTGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFSCLTL*EVGTAA
Trigger: AGCAGCAGTTCCAACTTCTCAAAGTGTCAAACATGA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCATGTTTGACACTTTaGGAAGTTGGAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSCLTL*EVGTAA
Trigger: AGCAGCAGTTCCAACTTCTCAAAGTGTCAAACATGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATACCATTCATACTACTTaGATTGGCGCTCTGATAGTA +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNTIHTT*IGALIV
Trigger: TACTATCAGAGCGCCAATTCAAGTAGTATGAATGGT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCAGATTTCAGTCATCTaGTTTAGACAGCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNQISVI*FRQLPF
Trigger: AAACGGAAGCTGTCTAAATCAGATGACTGAAATCTG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGAAGAAAGCGCATTTTaGAAAATGGTCCTATGGTCA +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNEESAF*KMVLWS
Trigger: TGACCATAGGACCATTTTTCAAAATGCGCTTTCTTC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAATACATTTCAGTCATCTaGTTTAGACAGCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKYISVI*FRQLPF
Trigger: AAACGGAAGCTGTCTAAATCAGATGACTGAAATGTA...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602651.1
CDS-3UTR TCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAACCGCCTAAGCAAACATaGATTTATATATGGCCTAAA +
Preference number: 4 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKPPKQT*IYIWPK
Trigger: TTTAGGCCATATATAAATTCATGTTTGCTTAGGCGG...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602651.1
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTACAACTCCAATCACTTaGCACAGCTTCCTTAGCATT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFTTPIT*HSFLSI
Trigger: AATGCTAAGGAAGCTGTGGCAAGTGATTGGAGTTGT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGACAACTCCAATCACTTaGCACAGCTTCCTTAGCATT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILTTPIT*HSFLSI
Trigger: AATGCTAAGGAAGCTGTGGCAAGTGATTGGAGTTGT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCAAGTCCATTTTTGTaGTCAACAAGTCTCATTAGC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECSSPFL*STSLIS
Trigger: GCTAATGAGACTTGTTGAGCACAAAAATGGACTTGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAACTTCTGTAGATTCTaGTTGCTCTGCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVNFCRF*LLCILL
Trigger: GAGGAGAATGCAGAGCAAGCAGAATCTACAGAAGTT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAACTTCTGTAGATTCTaGTTGCTCTGCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILNFCRF*LLCILL
Trigger: GAGGAGAATGCAGAGCAAGCAGAATCTACAGAAGTT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTATCAGGGTTTACCAATaGAGTTTCATGTTTGACACT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECIRVYQ*SFMFDT
Trigger: AGTGTCAAACATGAAACTGCATTGGTAAACCCTGAT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTAGTTCATCAAGGTCTTaGTCATTAAGAAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECSSSRS*SLRNLC
Trigger: GCACAAGTTTCTTAATGAGCAAGACCTTGATGAACT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTGGGTATTGGATCCTaGTTTTTGAGTGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLGIGS*FLSVYA
Trigger: GGCATACACACTCAAAAAGCAGGATCCAATACCCAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTATCAACTCAAGGTCTaGATCTTGTTCACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILYQLKV*ILFTGK
Trigger: CTTGCCAGTGAACAAGATCCAGACCTTGAGTTGATA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTAATTTAGCACTACATTaGGATGTTCCGAATCCACAT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECNLALH*DVPNPH
Trigger: ATGTGGATTCGGAACATCCCAATGTAGTGCTAAATT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCGTGCTGGCAGTACTTaGATGTATTCTGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNRAGST*MYSVYN
Trigger: ATTGTAAACAGAATACATCCAAGTACTGCCAGCACG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCATACTACTTGAATTaGCGCTCTGATAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECSYYLN*RSDSSS
Trigger: ACTACTACTATCAGAGCGCCAATTCAAGTAGTATGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCTTCATCCTCTTCCTaGTCATCAATAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECSSSSS*SSITSS
Trigger: AGATGAAGTTATTGATGACCAGGAAGAGGATGAAGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAATCTTCATCCTCTTCCTaGTCATCAATAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKSSSSS*SSITSS
Trigger: AGATGAAGTTATTGATGACCAGGAAGAGGATGAAGA...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602651.1
CDS-3UTR CCA 90 bp CTGCCAGTCTCCCTTCATAGAGATTGGGTAACTTTCCTTCAAAACAAAGTAAAATCCCTTCATAGAGATTaGGTAACTTTCCTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LPVSLHRDWVTFLQNKVKSLHRD*VTFLQN
Trigger: GTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGA...TTTTACTTTGTTTTGAAGGAAAGTTACCCAATCTCTATGAAGGGAGACTGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602651.1
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATATTTTGCTGATTGTCTaGATCCACAGATTCATGAAC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNILLIV*IHRFMN
Trigger: GTTCATGAATCTGTGGATTCAGACAATCAGCAAAAT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACTTCACGGTCTGGTTTaGTTTCATTCTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLHGLV*FHSLSL
Trigger: AAGAGAAAGAGAATGAAATCAAACCAGACCGTGAAG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTATAACAGTTATGGTCTaGGGTACAGTATGCACTGTT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFITVMV*GTVCTV
Trigger: AACAGTGCATACTGTACCTCAGACCATAACTGTTAT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGATAACAGTTATGGTCTaGGGTACAGTATGCACTGTT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILITVMV*GTVCTV
Trigger: AACAGTGCATACTGTACCTCAGACCATAACTGTTAT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTTCTGTATATTATTTTaGCTTGGAACGCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFFCILF*LGTPAT
Trigger: AGTGGCAGGCGTTCCAAGTCAAAATAATATACAGAA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTCTGTATATTATTTTaGCTTGGAACGCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILFCILF*LGTPAT
Trigger: AGTGGCAGGCGTTCCAAGTCAAAATAATATACAGAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGCACTGATTACTCTTTaGATTTCTCTGGTTGTACCT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVALITL*ISLVVP
Trigger: AGGTACAACCAGAGAAATTCAAAGAGTAATCAGTGC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGCACTGATTACTCTTTaGATTTCTCTGGTTGTACCT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILALITL*ISLVVP
Trigger: AGGTACAACCAGAGAAATTCAAAGAGTAATCAGTGC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTTAAATTTTATGAGTaGTGGTCCCCTGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILFKFYE*WSPVPV
Trigger: AACTGGGACAGGGGACCATCACTCATAAAATTTAAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTTTAAATTTTATGAGTaGTGGTCCCCTGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFFKFYE*WSPVPV
Trigger: AACTGGGACAGGGGACCATCACTCATAAAATTTAAA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACAGATTTCAGTCATCTaGTTTAGACAGCTTCCGTTT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVQISVI*FRQLPF
Trigger: AAACGGAAGCTGTCTAAATCAGATGACTGAAATCTG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTCAGACATCTTGAGTTaGAGAATTGATTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSDILS*RIDSPS
Trigger: TGAAGGAGAATCAATTCTTCAACTCAAGATGTCTGA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCAGTTAACACTCCCATaGTTCATAAGTGAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNQLTLP*FISEKL
Trigger: TAGCTTTTCACTTATGAATCATGGGAGTGTTAACTG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTCTTCCCAATATGAATaGACAGCACCAGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFSSQYE*TAPVFT
Trigger: TGTAAAGACTGGTGCTGTTCATTCATATTGGGAAGA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCTTCCCAATATGAATaGACAGCACCAGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSSQYE*TAPVFT
Trigger: TGTAAAGACTGGTGCTGTTCATTCATATTGGGAAGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGCAGCTTTCTCATGGTaGAATCAAGTAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFAAFSW*NQVKSL
Trigger: TAAGCTCTTTACTTGATTGCACCATGAGAAAGCTGC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGCAGCTTTCTCATGGTaGAATCAAGTAAAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILAAFSW*NQVKSL
Trigger: TAAGCTCTTTACTTGATTGCACCATGAGAAAGCTGC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTATTATGCTCAGAAAGTaGATCATACCTTTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECIMLRK*IIPFGK
Trigger: CTTACCAAAAGGTATGATGCACTTTCTGAGCATAAT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCTGTAGATTCTGCTTaGTCTGCATTCTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSVDSA*SAFSSL
Trigger: TAAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATCTGTAGATTCTGCTTaGTCTGCATTCTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVSVDSA*SAFSSL
Trigger: TAAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAGTTCATCAAGGTCTTaGTCATTAAGAAACTTGTGC +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSSSRS*SLRNLC
Trigger: GCACAAGTTTCTTAATGAGCAAGACCTTGATGAACT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGTGTTCTATTTACATTaGAGAACTTCCACCAACTGC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVVFYLH*RTSTNC
Trigger: GCAGTTGGTGGAAGTTCTGCAATGTAAATAGAACAC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGGAAATCAGCTACATTaGAGCATTTTGGAATTACTA +
Preference number: 4 (lower is better)
Translates to: GTTLSSISFGYWILLFECGNQLH*SILELL
Trigger: TAGTAATTCCAAAATGCTGCAATGTAGCTGATTTCC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTTCTGTTCTTTGAAATaGAAGGGTATCCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNFCSLK*KGIPSS
Trigger: ACTAGAAGGGATACCCTTCCATTTCAAAGAACAGAA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTAGCAGCTTTCTCATaGTGCAATCAAGTAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLAAFS*CNQVKS
Trigger: GCTCTTTACTTGATTGCACCATGAGAAAGCTGCTAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTAGCAGCTTTCTCATaGTGCAATCAAGTAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLAAFS*CNQVKS
Trigger: GCTCTTTACTTGATTGCACCATGAGAAAGCTGCTAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAATTTAGCACTACATTaGGATGTTCCGAATCCACAT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNNLALH*DVPNPH
Trigger: ATGTGGATTCGGAACATCCCAATGTAGTGCTAAATT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCGTGCTGGCAGTACTTaGATGTATTCTGTTTACAAT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFRAGST*MYSVYN
Trigger: ATTGTAAACAGAATACATCCAAGTACTGCCAGCACG...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTCTTCATCCTCTTCCTaGTCATCAATAACTTCATCT +
Preference number: 4 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSSSSS*SSITSS
Trigger: AGATGAAGTTATTGATGACCAGGAAGAGGATGAAGA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTATTTTGCTGATTGTCTaGATCCACAGATTCATGAAC +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFILLIV*IHRFMN
Trigger: GTTCATGAATCTGTGGATTCAGACAATCAGCAAAAT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAATTTTGCTGATTGTCTaGATCCACAGATTCATGAAC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVILLIV*IHRFMN
Trigger: GTTCATGAATCTGTGGATTCAGACAATCAGCAAAAT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTCATAGCCCATATGTaGTTTGTTAACAAGTTCATC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLIAHM*FVNKFI
Trigger: GATGAACTTGTTAACAAATCACATATGGGCTATGAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACTCATAGCCCATATGTaGTTTGTTAACAAGTTCATC +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVLIAHM*FVNKFI
Trigger: GATGAACTTGTTAACAAATCACATATGGGCTATGAG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCAGACATCTTGAGTTaGAGAATTGATTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSDILS*RIDSPS
Trigger: TGAAGGAGAATCAATTCTTCAACTCAAGATGTCTGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR TCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCAGTTAACACTCCCATaGTTCATAAGTGAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILQLTLP*FISEKL
Trigger: TAGCTTTTCACTTATGAATCATGGGAGTGTTAACTG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTCAAGTCCATTTTTGTaGTCAACAAGTCTCATTAGC +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFSSPFL*STSLIS
Trigger: GCTAATGAGACTTGTTGAGCACAAAAATGGACTTGA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCAAGTCCATTTTTGTaGTCAACAAGTCTCATTAGC +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSSPFL*STSLIS
Trigger: GCTAATGAGACTTGTTGAGCACAAAAATGGACTTGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAGATTCTGCTTGCTCTaGATTCTCCTCTTTAACAAA +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVRFCLL*ILLFNK
Trigger: TTTGTTAAAGAGGAGAATGCAGAGCAAGCAGAATCT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGATTCTGCTTGCTCTaGATTCTCCTCTTTAACAAA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILRFCLL*ILLFNK
Trigger: TTTGTTAAAGAGGAGAATGCAGAGCAAGCAGAATCT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGATCAGGGTTTACCAATaGAGTTTCATGTTTGACACT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILIRVYQ*SFMFDT
Trigger: AGTGTCAAACATGAAACTGCATTGGTAAACCCTGAT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTCTGTTCTTTGAAATaGAAGGGTATCCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVFCSLK*KGIPSS
Trigger: ACTAGAAGGGATACCCTTCCATTTCAAAGAACAGAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCCATGTTTTAAACGTTaGGCTGAAAACCATATCTTG +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILPCFKR*AENHIL
Trigger: CAAGATATGGTTTTCAGCCCAACGTTTAAAACATGG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACCATGTTTTAAACGTTaGGCTGAAAACCATATCTTG +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVPCFKR*AENHIL
Trigger: CAAGATATGGTTTTCAGCCCAACGTTTAAAACATGG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTATATTATTTTGACTTaGAACGCCTGCCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILYIILT*NACHCQ
Trigger: TTGACAGTGGCAGGCGTTCCAAGTCAAAATAATATA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTATATTATTTTGACTTaGAACGCCTGCCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFYIILT*NACHCQ
Trigger: TTGACAGTGGCAGGCGTTCCAAGTCAAAATAATATA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATATATTATTTTGACTTaGAACGCCTGCCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVYIILT*NACHCQ
Trigger: TTGACAGTGGCAGGCGTTCCAAGTCAAAATAATATA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTCATACTACTTGAATTaGCGCTCTGATAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFSYYLN*RSDSSS
Trigger: ACTACTACTATCAGAGCGCCAATTCAAGTAGTATGA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCATACTACTTGAATTaGCGCTCTGATAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSYYLN*RSDSSS
Trigger: ACTACTACTATCAGAGCGCCAATTCAAGTAGTATGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR GCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTATTATGCTCAGAAAGTaGATCATACCTTTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFIMLRK*IIPFGK
Trigger: CTTACCAAAAGGTATGATGCACTTTCTGAGCATAAT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR GCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAATTATGCTCAGAAAGTaGATCATACCTTTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVIMLRK*IIPFGK
Trigger: CTTACCAAAAGGTATGATGCACTTTCTGAGCATAAT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGATTTCTTTTGGGTATTaGATCCTGCTTTTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILISFGY*ILLFEC
Trigger: ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAAT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CCA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACATACAGTATTAAACTaGACTGAATATGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: TTLSSISFGYWILLFECVHTVLN*TEYEDK
Trigger: CTTGTCCTCATATTCAGTCCAGTTTAATACTGTATG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CCA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCATACAGTATTAAACTaGACTGAATATGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFHTVLN*TEYEDK
Trigger: CTTGTCCTCATATTCAGTCCAGTTTAATACTGTATG...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS CCA 90 bp TCTGCGCTCCAGTTCCCACCCGCAGCCCAGAGTCTCCGGGCCCGCTaGTCGCGGAGCCGGCTCGCGCCACTACCTGCAGGGGCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: SALQFPPAAQSLRAR*SRSRLAPLPAGAAA
Trigger: CGCGGCGGCCCCTGCAGGTAGTGGCGCGAGCCGGCTCCGCGACCAGCGGGCCCGGAGACTCTGGGCTGCGGGTGGGAACTGGAGCGCAGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000480132.6
ENST00000522595.5
CDS GCA 90 bp AAAGCAGCAGTCTGTCTTCTCCTTTCCCGTGCCGGCCGCGGACTCTaGGCTCCAGTTCCCACCCGCAGCCCAGAGTCTCCGGGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: KAAVCLLLSRAGRGL*APVPTRSPESPGPL
Trigger: CAGCGGGCCCGGAGACTCTGGGCTGCGGGTGGGAACTGGAGCGCAGAGTCCGCGGCCGGCACGGGAAAGGAGAAGACAGACTGCTGCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000480132.6
ENST00000522595.5
CDS CCA 90 bp AGCTCTTTCGGTGGCGGAGACACCCAAAAAGAGCGAGGGAGGCTGTaGGTCTGTCTGTCCCTCTGCGGCGACTACCCAGCCGCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSFGGGDTQKERGRL*VCLSLCGDYPAARQ
Trigger: CTGCCTCGCGGCTGGGTAGTCGCCGCAGAGGGACAGACAGACCCACAGCCTCCCTCGCTCTTTTTGGGTGTCTCCGCCACCGAAAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524267.5
CDS TCA 90 bp GCATTTCAAACCGGCTGCACTTTTCAGGGAGTCAACTCTGACCTGTaGACCCTAAACCCGGAACCGCTCGGCGGGCCCGCAAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: AFQTGCTFQGVNSDL*TLNPEPLGGPAKGP
Trigger: AGGCCCCTTTGCGGGCCCGCCGAGCGGTTCCGGGTTTAGGGTTCACAGGTCAGAGTTGACTCCCTGAAAAGTGCAGCCGGTTTGAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000522595.5
CDS CCA 90 bp GACTCCCAACATTACTGGGGTGCTCCCTCCGGCGGCGCCCTCCGCTaGGAATACGCAGTCTTCACTCCTCTCAACAATCCTAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DSQHYWGAPSGGALR*EYAVFTPLNNPKLL
Trigger: CAGCAACTTAGGATTGTTGAGAGGAGTGAAGACTGCGTATTCCCAGCGGAGGGCGCCGCCGGAGGGAGCACCCCAGTAATGTTGGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524267.5
CDS TCA 90 bp CCATCTTGCATTTCAAACCGGCTGCACTTTTCAGGGAGTCAACTCTaGCCTGTGAACCCTAAACCCGGAACCGCTCGGCGGGCCCGCAAA +
Preference number: 5 (lower is better)
Translates to: PSCISNRLHFSGSQL*PVNPKPGTARRARK
Trigger: TTTGCGGGCCCGCCGAGCGGTTCCGGGTTTAGGGTTCACAGGTCAGAGTTGACTCCCTGAAAAGTGCAGCCGGTTTGAAATGCAAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000522595.5
CDS CCA 90 bp TTGACTTGGAACGCCTGCCACTGTCAAGGCTATAGGTGCTGTAACTaGCAAGGTGTTTGTTCCAGCCACTTGAGTAAGGACCAGACCAGG +
Preference number: 5 (lower is better)
Translates to: LTWNACHCQGYRCCN*QGVCSSHLSKDQTR
Trigger: CCTGGTCTGGTCCTTACTCAAGTGGCTGGAACAAACACCTTGCCAGTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 90 bp TCTAGCAAGCCCGCTTTCTTTGGCCAACTTGTCATACTCTTCTGGTaGTGGCCACTGTGTCCGGACAAATGCACTCTTAAGCATGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSKPAFFGQLVILFW*WPLCPDKCTLKHVQ
Trigger: CTGCACATGCTTAAGAGTGCATTTGTCCGGACACAGTGGCCATCACCAGAAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCCAGTCGCGGACCCTTaGTGCAGAGCTCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECPVADP*CRAPLS
Trigger: GCTCAGCGGAGCTCTGCACAAAGGGTCCGCGACTGG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGCGCTCCTGGGCCCCTaGACGTTCACTCCCCACCCC +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILALLGP*TFTPHP
Trigger: GGGGTGGGGAGTGAACGTCAAGGGGCCCAGGAGCGC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCCACACGCCGGGCCTaGGACGCTCGAGCGCTCCTG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSTRRA*DARALL
Trigger: CAGGAGCGCTCGAGCGTCCAAGGCCCGGCGTGTGGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522655.5
CDS GCA 90 bp AGCAGATACAGCAGTTATCACCTGTGCCAATCCAGGAAGAACTGCTaGTGGTGTCACTACCGTGCTGGCAGTACTTGGATGTATTCTGTT +
Preference number: 5 (lower is better)
Translates to: SRYSSYHLCQSRKNC*WCHYRAGSTWMYSV
Trigger: AACAGAATACATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGATTGGCACAGGTGATAACTGCTGTATCTGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 90 bp TCACCTGTGCCAATCCAGGAAGAACTGCTGCTGGTGTCACTACCGTaGTGGCAGTACTTGGATGTATTCTGTTTACAATGGAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: SPVPIQEELLLVSLP*WQYLDVFCLQWKYL
Trigger: CAAGTACTTCCATTGTAAACAGAATACATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGATTGGCACAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 90 bp AATCAAATTAGAATTCTGCTGAGCAGATACAGCAGTTATCACCTGTaGCAATCCAGGAAGAACTGCTGCTGGTGTCACTACCGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: NQIRILLSRYSSYHL*QSRKNCCWCHYRAG
Trigger: GCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGATTGGCACAGGTGATAACTGCTGTATCTGCTCAGCAGAATTCTAATTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 90 bp AGATACAGCAGTTATCACCTGTGCCAATCCAGGAAGAACTGCTGCTaGTGTCACTACCGTGCTGGCAGTACTTGGATGTATTCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: RYSSYHLCQSRKNCC*CHYRAGSTWMYSVY
Trigger: GTAAACAGAATACATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGATTGGCACAGGTGATAACTGCTGTATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCCTCTTCCCCGTCCTTaGGGTCTCCCTCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECPLPRP*GLPLPL
Trigger: AAGAGGGAGAGGGAGACCCAAAGGACGGGGAAGAGG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCCTCTTCCCCGTCCTTaGGGTCTCCCTCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNPLPRP*GLPLPL
Trigger: AAGAGGGAGAGGGAGACCCAAAGGACGGGGAAGAGG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS TCA 90 bp AAGGTCTGGATCTTGTTCACTGGCAAGGACCATGCAAGGTGTTGTTaGTTTTCGCCTGCTTGCCATTCTGATGTTATGAGGAAAAGCTCA +
Preference number: 5 (lower is better)
Translates to: KVWILFTGKDHARCC*FSPACHSDVMRKSS
Trigger: TGAGCTTTTCCTCATAACATCAGAATGGCAAGCAGGCGAAAATCAACAACACCTTGCATGGTCCTTGCCAGTGAACAAGATCCAGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522595.5
ENST00000522655.5
CDS GCA 90 bp TATATTATTTTGACTTGGAACGCCTGCCACTGTCAAGGCTATAGGTaGTGTAACTGGCAAGGTGTTTGTTCCAGCCACTTGAGTAAGGAC +
Preference number: 5 (lower is better)
Translates to: YIILTWNACHCQGYR*CNWQGVCSSHLSKD
Trigger: GTCCTTACTCAAGTGGCTGGAACAAACACCTTGCCAGTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAAAATAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 90 bp AGGAAAAGGATTCCAGGATTGCTTAGGCTGTGCAGTACCAACAGTTaGGGATTCCGTGGTTTCATCACTGGAGTCTATAATAATGGTGGT +
Preference number: 5 (lower is better)
Translates to: RKRIPGLLRLCSTNS*GFRGFITGVYNNGG
Trigger: ACCACCATTATTATAGACTCCAGTGATGAAACCACGGAATCCCCAACTGTTGGTACTGCACAGCCTAAGCAATCCTGGAATCCTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCACGCCGCCGCCATCTaGCATTTCAAACCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFHAAAI*HFKPAA
Trigger: TGCAGCCGGTTTGAAATGCAAGATGGCGGCGGCGTG...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCCTCTTCCCCGTCCTTaGGGTCTCCCTCTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFPLPRP*GLPLPL
Trigger: AAGAGGGAGAGGGAGACCCAAAGGACGGGGAAGAGG...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS GCA 90 bp AGCAGGTACCTGACTTTTCTGTATATTATTTTGACTTGGAACGCCTaGCACTGTCAAGGCTATAGGTGCTGTAACTGGCAAGGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: SRYLTFLYIILTWNA*HCQGYRCCNWQGVC
Trigger: ACAAACACCTTGCCAGTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAAAATAATATACAGAAAAGTCAGGTACCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 90 bp GACACTTTGAGAAGTTGGAACTGCTGCTGTTGCTGGCTTTGTTTCTaGAGTAGGCTGAGCAGCAGGTACCTGACTTTTCTGTATATTATT +
Preference number: 5 (lower is better)
Translates to: DTLRSWNCCCCWLCF*SRLSSRYLTFLYII
Trigger: AATAATATACAGAAAAGTCAGGTACCTGCTGCTCAGCCTACTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCAACTTCTCAAAGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTGCAGTACCAACAGTaGGGGATTCCGTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECVQYQQ*GIPWFH
Trigger: ATGAAACCACGGAATCCCCAACTGTTGGTACTGCAC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 90 bp CCATTACTCCCTGTGGAAATGTGTGTAGGAATAACAGTTATGGTCTaGGGTACAGTATGCACTGTTCCATTGAATTGTTTCCTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: PLLPVEMCVGITVMV*GTVCTVPLNCFLLA
Trigger: GGCAAGAAGGAAACAATTCAATGGAACAGTGCATACTGTACCTCAGACCATAACTGTTATTCCTACACACATTTCCACAGGGAGTAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 90 bp CCAAATGAATCAGGGTTTACCAATGCAGTTTCATGTTTGACACTTTaGGAAGTTGGAACTGCTGCTGTTGCTGGCTTTGTTTCTGCAGTA +
Preference number: 5 (lower is better)
Translates to: PNESGFTNAVSCLTL*EVGTAAVAGFVSAV
Trigger: TACTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCAACTTCTCAAAGTGTCAAACATGAAACTGCATTGGTAAACCCTGATTCATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 90 bp CCCTCTCCCTCTTTTCCTAAGGGAAGACAGACCATTCATACTACTTaGATTGGCGCTCTGATAGTAGTAGTACCATTTCAAGTTTCCATT +
Preference number: 5 (lower is better)
Translates to: PSPSFPKGRQTIHTT*IGALIVVVPFQVSI
Trigger: AATGGAAACTTGAAATGGTACTACTACTATCAGAGCGCCAATTCAAGTAGTATGAATGGTCTGTCTTCCCTTAGGAAAAGAGGGAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGGACCATGCAAGGTGTaGTTGATTTTCGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNGPCKV*LIFACL
Trigger: CAAGCAGGCGAAAATCAACAACACCTTGCATGGTCC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCTCAAGGTCTGGATCTaGTTCACTGGCAAGGACCAT +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNLKVWI*FTGKDH
Trigger: ATGGTCCTTGCCAGTGAACAAGATCCAGACCTTGAG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTTTGTTCCAGCCACTaGAGTAAGGACCAGACCAGG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVCSSH*SKDQTR
Trigger: CCTGGTCTGGTCCTTACTCAAGTGGCTGGAACAAAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGTTTGTTCCAGCCACTaGAGTAAGGACCAGACCAGG +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFVCSSH*SKDQTR
Trigger: CCTGGTCTGGTCCTTACTCAAGTGGCTGGAACAAAC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTTGGAACTGCTGCTGTaGCTGGCTTTGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNLELLL*LALFLQ
Trigger: CTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCAA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGTGCAGTACCAACAGTaGGGGATTCCGTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNVQYQQ*GIPWFH
Trigger: ATGAAACCACGGAATCCCCAACTGTTGGTACTGCAC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTAAAAGGATTCCAGGATaGCTTAGGCTGTGCAGTACC +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECKRIPG*LRLCST
Trigger: GGTACTGCACAGCCTAAGCAATCCTGGAATCCTTTT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGCAAGCCCGCTTTCTTaGGCCAACTTGTCATACTCT +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNASPLS*ANLSYS
Trigger: AGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTGC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGGACCATGCAAGGTGTaGTTGATTTTCGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVGPCKV*LIFACL
Trigger: CAAGCAGGCGAAAATCAACAACACCTTGCATGGTCC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACTCAAGGTCTGGATCTaGTTCACTGGCAAGGACCAT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVLKVWI*FTGKDH
Trigger: ATGGTCCTTGCCAGTGAACAAGATCCAGACCTTGAG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTCAAGGTCTGGATCTaGTTCACTGGCAAGGACCAT +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLKVWI*FTGKDH
Trigger: ATGGTCCTTGCCAGTGAACAAGATCCAGACCTTGAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCACTGTTCCATTGAATaGTTTCCTTCTTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECHCSIE*FPSCLL
Trigger: GAGGAGGCAAGAAGGAAACAATTCAATGGAACAGTG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTGGAACTGCTGCTGTaGCTGGCTTTGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLELLL*LALFLQ
Trigger: CTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTGGAACTGCTGCTGTaGCTGGCTTTGTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVLELLL*LALFLQ
Trigger: CTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGTGCAGTACCAACAGTaGGGGATTCCGTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVVQYQQ*GIPWFH
Trigger: ATGAAACCACGGAATCCCCAACTGTTGGTACTGCAC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGCAAGCCCGCTTTCTTaGGCCAACTTGTCATACTCT +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILASPLS*ANLSYS
Trigger: AGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTGC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCAGTTGTTAATTCTTTaGCTTCCTCTAGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNQLLIL*LPLGRP
Trigger: TGGGCGGCCTAGAGGAAGCAAAAGAATTAACAACTG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS TCA 90 bp CTATTAACAGGGATTAAGACTTTGGGAATCAAATTAGAATTCTGCTaGGCAGATACAGCAGTTATCACCTGTGCCAATCCAGGAAGAACT +
Preference number: 5 (lower is better)
Translates to: LLTGIKTLGIKLEFC*ADTAVITCANPGRT
Trigger: AGTTCTTCCTGGATTGGCACAGGTGATAACTGCTGTATCTGCTCAGCAGAATTCTAATTTGATTCCCAAAGTCTTAATCCCTGTTAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGAACCTCTTCATCACTaGAGATACTCTCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFEPLHH*RYSLLW
Trigger: CCAGAGCAGAGAGTATCTCAAGTGATGAAGAGGTTC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGAACCTCTTCATCACTaGAGATACTCTCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILEPLHH*RYSLLW
Trigger: CCAGAGCAGAGAGTATCTCAAGTGATGAAGAGGTTC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATGCACTGTTCCATaGAATTGTTTCCTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECVCTVP*NCFLLA
Trigger: GGCAAGAAGGAAACAATTCAATGGAACAGTGCATAC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATATTATTTTGACTaGGAACGCCTGCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECVYYFD*ERLPLS
Trigger: TGACAGTGGCAGGCGTTCCAAGTCAAAATAATATAC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAAAAGGATTCCAGGATaGCTTAGGCTGTGCAGTACC +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILKRIPG*LRLCST
Trigger: GGTACTGCACAGCCTAAGCAATCCTGGAATCCTTTT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCTCTTCTGGTAAGTTaGGTTTGTGCCCTTAACCTA +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECSLLVS*VCALNL
Trigger: TAGGTTAAGGGCACAAACCAAACTTACCAGAAGAGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCTCCAGCTTCTTCTTaGGAACTACCTGCATTACTT +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECSPASS*ELPALL
Trigger: AAGTAATGCAGGTAGTTCCAAAGAAGAAGCTGGAGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGACCATTCATACTACTaGAATTGGCGCTCTGATAGT +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECDHSYY*NWRSDS
Trigger: ACTATCAGAGCGCCAATTCAAGTAGTATGAATGGTC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCAGTTGTTAATTCTTTaGCTTCCTCTAGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILQLLIL*LPLGRP
Trigger: TGGGCGGCCTAGAGGAAGCAAAAGAATTAACAACTG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTACAGTTGTTAATTCTTTaGCTTCCTCTAGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVQLLIL*LPLGRP
Trigger: TGGGCGGCCTAGAGGAAGCAAAAGAATTAACAACTG...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGGTCCCCTGTCCCAGTaGTTAATTCTTTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILGPLSQ*LILLLP
Trigger: AGGAAGCAAAAGAATTAACAACTGGGACAGGGGACC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGGTCCCCTGTCCCAGTaGTTAATTCTTTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFGPLSQ*LILLLP
Trigger: AGGAAGCAAAAGAATTAACAACTGGGACAGGGGACC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTCGAAGAAAGCGCATTTaGAAAAATGGTCCTATGGTC +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECRRKRI*KNGPMV
Trigger: GACCATAGGACCATTTTTCAAAATGCGCTTTCTTCG...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCACTGTTCCATTGAATaGTTTCCTTCTTGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILHCSIE*FPSCLL
Trigger: GAGGAGGCAAGAAGGAAACAATTCAATGGAACAGTG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATGTATATTATTTTGACTaGGAACGCCTGCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNVYYFD*ERLPLS
Trigger: TGACAGTGGCAGGCGTTCCAAGTCAAAATAATATAC...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGCTCTTTTGTCTTTTTaGCCCGAATGCCAAATGAAT +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECALLSF*PECQMN
Trigger: ATTCATTTGGCATTCGGGCAAAAAAGACAAAAGAGC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTAGCACTGATTACTCTTaGAATTTCTCTGGTTGTACC +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECSTDYS*NFSGCT
Trigger: GGTACAACCAGAGAAATTCAAAGAGTAATCAGTGCT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTCTCCAGCTTCTTCTTaGGAACTACCTGCATTACTT +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSPASS*ELPALL
Trigger: AAGTAATGCAGGTAGTTCCAAAGAAGAAGCTGGAGA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATCTTTCTTTGGCCAACTaGTCATACTCTTCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNLSLAN*SYSSGD
Trigger: ATCACCAGAAGAGTATGACAAGTTGGCCAAAGAAAG...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS CCA 90 bp CAAGTCCATTTTTGTGCTCAACAAGTCTCATTAGCAGCTTTCTCATaGTGCAATCAAGTAAAGAGCTTATTGTTGGCAGATAAAATACTG +
Preference number: 5 (lower is better)
Translates to: QVHFCAQQVSLAAFS*CNQVKSLLLADKIL
Trigger: CAGTATTTTATCTGCCAACAATAAGCTCTTTACTTGATTGCACCATGAGAAAGCTGCTAATGAGACTTGTTGAGCACAAAAATGGACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522595.5
ENST00000522655.5
ENST00000524267.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTCTTCAAGTCCATTTTaGTGCTCAACAAGTCTCATT +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECSSSPF*CSTSLI
Trigger: AATGAGACTTGTTGAGCACAAAAATGGACTTGAAGA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGAATTTAGCACTACATaGGGATGTTCCGAATCCACA +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILEFSTT*GCSEST
Trigger: TGTGGATTCGGAACATCCCAATGTAGTGCTAAATTC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGAATTTAGCACTACATaGGGATGTTCCGAATCCACA +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVEFSTT*GCSEST
Trigger: TGTGGATTCGGAACATCCCAATGTAGTGCTAAATTC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTAGTGCATCATACCTTTaGGTAAGAAAATTGCATTCG +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECSASYL*VRKLHS
Trigger: CGAATGCAATTTTCTTACCAAAAGGTATGATGCACT...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTTCTGTAGATTCTGCTaGCTCTGCATTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFFCRFC*LCILLF
Trigger: AAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGAA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTCTGTAGATTCTGCTaGCTCTGCATTCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVFCRFC*LCILLF
Trigger: AAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTTAAGTAAAAGGGGATaGTTATCCAATGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECLSKRG*LSNAAL
Trigger: CAATGCTGCATTGGATAACAATCCCCTTTTACTTAA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGCTGAAAACCATATCTaGATCTGTTCCTCTGTATAT +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECAENHI*ICSSVY
Trigger: ATATACAGAGGAACAGATCAAGATATGGTTTTCAGC...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGTATGCACTGTTCCATaGAATTGTTTCCTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFVCTVP*NCFLLA
Trigger: GGCAAGAAGGAAACAATTCAATGGAACAGTGCATAC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTATGCACTGTTCCATaGAATTGTTTCCTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVCTVP*NCFLLA
Trigger: GGCAAGAAGGAAACAATTCAATGGAACAGTGCATAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGTATATTATTTTGACTaGGAACGCCTGCCACTGTCA +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVVYYFD*ERLPLS
Trigger: TGACAGTGGCAGGCGTTCCAAGTCAAAATAATATAC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATTTTCTGTATATTATTTaGACTTGGAACGCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNFLYII*TWNACH
Trigger: GTGGCAGGCGTTCCAAGTCAAAATAATATACAGAAA...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp GGCACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTTTTGAATTTCTCTGGTaGTACCTTGTGTCACTAAAC +
Preference number: 5 (lower is better)
Translates to: GTTLSSISFGYWILLFECFEFLW*YLVSLN
Trigger: GTTTAGTGACACAAGGTACAACCAGAGAAATTCAAA...ACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTTCTCTTCTGGTAAGTTaGGTTTGTGCCCTTAACCTA +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFSLLVS*VCALNL
Trigger: TAGGTTAAGGGCACAAACCAAACTTACCAGAAGAGA...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCTCTTCTGGTAAGTTaGGTTTGTGCCCTTAACCTA +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSLLVS*VCALNL
Trigger: TAGGTTAAGGGCACAAACCAAACTTACCAGAAGAGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATCTCCAGCTTCTTCTTaGGAACTACCTGCATTACTT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVSPASS*ELPALL
Trigger: AAGTAATGCAGGTAGTTCCAAAGAAGAAGCTGGAGA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCTTTCTTTGGCCAACTaGTCATACTCTTCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLSLAN*SYSSGD
Trigger: ATCACCAGAAGAGTATGACAAGTTGGCCAAAGAAAG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGACCATTCATACTACTaGAATTGGCGCTCTGATAGT +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFDHSYY*NWRSDS
Trigger: ACTATCAGAGCGCCAATTCAAGTAGTATGAATGGTC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGACCATTCATACTACTaGAATTGGCGCTCTGATAGT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVDHSYY*NWRSDS
Trigger: ACTATCAGAGCGCCAATTCAAGTAGTATGAATGGTC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTATTGGATCCTGCTTTTaGAGTGTGTATGCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFIGSCF*SVYAPK
Trigger: TTTTGGGGCATACACACTCAAAAAGCAGGATCCAAT...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAATTGGATCCTGCTTTTaGAGTGTGTATGCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVIGSCF*SVYAPK
Trigger: TTTTGGGGCATACACACTCAAAAAGCAGGATCCAAT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGCGAAGAAAGCGCATTTaGAAAAATGGTCCTATGGTC +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILRRKRI*KNGPMV
Trigger: GACCATAGGACCATTTTTCAAAATGCGCTTTCTTCG...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS GCA 90 bp TTACTGATAGATATTCCCGAAGAAGAAACTTCTGTAGATTCTGCTTaGTCTGCATTCTCCTCTTTAACAAAACTACCATCAAAAGTCAGA +
Preference number: 5 (lower is better)
Translates to: LLIDIPEEETSVDSA*SAFSSLTKLPSKVR
Trigger: TCTGACTTTTGATGGTAGTTTTGTTAAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGAAGTTTCTTCTTCGGGAATATCTATCAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAGTGCATCATACCTTTaGGTAAGAAAATTGCATTCG +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNSASYL*VRKLHS
Trigger: CGAATGCAATTTTCTTACCAAAAGGTATGATGCACT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTTCCTCTGTATATTTaGCTTGAGCAGAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVPLYI*LEQKEL
Trigger: CAGTTCTTTCTGCTCAAGCAAAATATACAGAGGAAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGTTCCTCTGTATATTTaGCTTGAGCAGAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFVPLYI*LEQKEL
Trigger: CAGTTCTTTCTGCTCAAGCAAAATATACAGAGGAAC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGTTCCTCTGTATATTTaGCTTGAGCAGAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVVPLYI*LEQKEL
Trigger: CAGTTCTTTCTGCTCAAGCAAAATATACAGAGGAAC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTTCTGTATATTATTTaGACTTGGAACGCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVFLYII*TWNACH
Trigger: GTGGCAGGCGTTCCAAGTCAAAATAATATACAGAAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTTCTGTATATTATTTaGACTTGGAACGCCTGCCAC +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILFLYII*TWNACH
Trigger: GTGGCAGGCGTTCCAAGTCAAAATAATATACAGAAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp TTGGTGCAGTATTTATTTCAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTGCTCTTTTGTCTTTTTaGCCCGAATGCCAAATGAAT +
Preference number: 5 (lower is better)
Translates to: LVQYLFQSFTLSKLPCQFALLSF*PECQMN
Trigger: ATTCATTTGGCATTCGGGCAAAAAAGACAAAAGAGC...AAACTGACATGGTAATTTGGATAGGGTGAAGCTTTGAAATAAATACTGCACCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGCTCTTTTGTCTTTTTaGCCCGAATGCCAAATGAAT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVALLSF*PECQMN
Trigger: ATTCATTTGGCATTCGGGCAAAAAAGACAAAAGAGC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGCACTGATTACTCTTaGAATTTCTCTGGTTGTACC +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSTDYS*NFSGCT
Trigger: GGTACAACCAGAGAAATTCAAAGAGTAATCAGTGCT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAGCACTGATTACTCTTaGAATTTCTCTGGTTGTACC +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVSTDYS*NFSGCT
Trigger: GGTACAACCAGAGAAATTCAAAGAGTAATCAGTGCT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAGTGTTCTATTTACATaGCAGAACTTCCACCAACTG +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVSVLFT*QNFHQL
Trigger: CAGTTGGTGGAAGTTCTGCAATGTAAATAGAACACT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS-3UTR CAA 90 bp CAAAGCTTCACCCTATCCAAATTACCATGTCAGTTTCTTTTCCTTCTTCAGAATAGGAAATCAGCTACATaGCAGCATTTTGGAATTACT +
Preference number: 5 (lower is better)
Translates to: QSFTLSKLPCQFLFLLQNRKSAT*QHFGIT
Trigger: AGTAATTCCAAAATGCTGCAATGTAGCTGATTTCCT...ATTCTGAAGAAGGAAAAGAAACTGACATGGTAATTTGGATAGGGTGAAGCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS TCA 90 bp TCTATAATAATGGTGGTAGAGGAATCATTGTTGAGATGTAAGCACTaGTTACTCTTTGAATTTCTCTGGTTGTACCTTGTGTCACTAAAC +
Preference number: 5 (lower is better)
Translates to: SIIMVVEESLLRCKH*LLFEFLWLYLVSLN
Trigger: GTTTAGTGACACAAGGTACAACCAGAGAAATTCAAAGAGTAATCAGTGCTTACATCTCAACAATGATTCCTCTACCACCATTATTATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 90 bp CTGGTTATTACGTTTCACCATAGTCAACTTAAAATTCTCTTCTCCTaGGTGATATTTCAGATTATGCTCAGAAAGTGCATCATACCTTTT +
Preference number: 5 (lower is better)
Translates to: LVITFHHSQLKILFS*VIFQIMLRKCIIPF
Trigger: AAAAGGTATGATGCACTTTCTGAGCATAATCTGAAATATCACCCAGGAGAAGAGAATTTTAAGTTGACTATGGTGAAACGTAATAACCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGTAAAGAGCTTATTGTaGGCAGATAAAATACTGCTG +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVVKSLL*ADKILL
Trigger: CAGCAGTATTTTATCTGCCAACAATAAGCTCTTTAC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGGTAAAGAGCTTATTGTaGGCAGATAAAATACTGCTG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILVKSLL*ADKILL
Trigger: CAGCAGTATTTTATCTGCCAACAATAAGCTCTTTAC...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTCTTCAAGTCCATTTTaGTGCTCAACAAGTCTCATT +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSSSPF*CSTSLI
Trigger: AATGAGACTTGTTGAGCACAAAAATGGACTTGAAGA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGAGTGCATCATACCTTTaGGTAAGAAAATTGCATTCG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILSASYL*VRKLHS
Trigger: CGAATGCAATTTTCTTACCAAAAGGTATGATGCACT...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACGTTTTCAATGTCATCAAAGATTGGGCAAATTCACAGTAAATCAGACATCTTGTTAAGTAAAAGGGGATaGTTATCCAATGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: TFSMSSKIGQIHSKSDILLSKRG*LSNAAL
Trigger: CAATGCTGCATTGGATAACAATCCCCTTTTACTTAA...CAAGATGTCTGATTTACTGTGAATTTGCCCAATCTTTGATGACATTGAAAACGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTAAGTAAAAGGGGATaGTTATCCAATGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVLSKRG*LSNAAL
Trigger: CAATGCTGCATTGGATAACAATCCCCTTTTACTTAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAGCTGAAAACCATATCTaGATCTGTTCCTCTGTATAT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVAENHI*ICSSVY
Trigger: ATATACAGAGGAACAGATCAAGATATGGTTTTCAGC...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTATTTGAATTTCTCTGGTaGTACCTTGTGTCACTAAAC +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVFEFLW*YLVSLN
Trigger: GTTTAGTGACACAAGGTACAACCAGAGAAATTCAAA...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS-3UTR CAA 90 bp ACAACATTAAGTTCCATTTCTTTTGGGTATTGGATCCTGCTTTTTGAGTGTGTAAGGAAATCAGCTACATaGCAGCATTTTGGAATTACT +
Preference number: 5 (lower is better)
Translates to: TTLSSISFGYWILLFECVRKSAT*QHFGIT
Trigger: AGTAATTCCAAAATGCTGCAATGTAGCTGATTTCCT...TACACACTCAAAAAGCAGGATCCAATACCCAAAAGAAATGGAACTTAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000395571.8
CDS CCA 72 bp CAGTTCCCACCCGCAGCCCAGAGTCTCCGGGCCCGCTaGTCGCGGAGCCGGCTCGCGCCACTACCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: QFPPAAQSLRAR*SRSRLAPLPAG
Trigger: CCCTGCAGGTAGTGGCGCGAGCCGGCTCCGCGACCAGCGGGCCCGGAGACTCTGGGCTGCGGGTGGGAACTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000480132.6
ENST00000522595.5
CDS GCA 72 bp GTCTGTCTTCTCCTTTCCCGTGCCGGCCGCGGACTCTaGGCTCCAGTTCCCACCCGCAGCCCAGAGTCTCCG +
Preference number: 6 (lower is better)
Translates to: VCLLLSRAGRGL*APVPTRSPESP
Trigger: CGGAGACTCTGGGCTGCGGGTGGGAACTGGAGCGCAGAGTCCGCGGCCGGCACGGGAAAGGAGAAGACAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000480132.6
ENST00000522595.5
CDS CAA 90 bp AGCAGCAGTCTGTCTTCTCCCTCCAGCTGCTCCACACGCCGGGCCTaGGACGCTCGAGCGCTCCTGGGCCCCTTGACGTTCACTCCCCAC +
Preference number: 6 (lower is better)
Translates to: SSSLSSPSSCSTRRA*DARALLGPLTFTPH
Trigger: GTGGGGAGTGAACGTCAAGGGGCCCAGGAGCGCTCGAGCGTCCAAGGCCCGGCGTGTGGAGCAGCTGGAGGGAGAAGACAGACTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522655.5
CDS CAA 90 bp ACCTGCAGGGGCCGCCGCGCCTCTCAGCGCCACGCCGCCGCCATCTaGCATTTCAAACCGGCTGCACTTTTCAGGGAGTCAACTCTGACC +
Preference number: 6 (lower is better)
Translates to: TCRGRRASQRHAAAI*HFKPAALFRESTLT
Trigger: GGTCAGAGTTGACTCCCTGAAAAGTGCAGCCGGTTTGAAATGCAAGATGGCGGCGGCGTGGCGCTGAGAGGCGCGGCGGCCCCTGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000522595.5
CDS TCA 72 bp ACCGGCTGCACTTTTCAGGGAGTCAACTCTGACCTGTaGACCCTAAACCCGGAACCGCTCGGCGGGCCCGCA +
Preference number: 6 (lower is better)
Translates to: TGCTFQGVNSDL*TLNPEPLGGPA
Trigger: TGCGGGCCCGCCGAGCGGTTCCGGGTTTAGGGTTCACAGGTCAGAGTTGACTCCCTGAAAAGTGCAGCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000522595.5
CDS TCA 72 bp ATTTCAAACCGGCTGCACTTTTCAGGGAGTCAACTCTaGCCTGTGAACCCTAAACCCGGAACCGCTCGGCGG +
Preference number: 6 (lower is better)
Translates to: ISNRLHFSGSQL*PVNPKPGTARR
Trigger: CCGCCGAGCGGTTCCGGGTTTAGGGTTCACAGGTCAGAGTTGACTCCCTGAAAAGTGCAGCCGGTTTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297857.3
ENST00000522595.5
CDS GCA 72 bp AGCAGTTATCACCTGTGCCAATCCAGGAAGAACTGCTaGTGGTGTCACTACCGTGCTGGCAGTACTTGGATG +
Preference number: 6 (lower is better)
Translates to: SSYHLCQSRKNC*WCHYRAGSTWM
Trigger: CATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGATTGGCACAGGTGATAACTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp TTGACTTGGAACGCCTGCCACTGTCAAGGCTATAGGTaGTGTAACTGGCAAGGTGTTTGTTCCAGCCACTTG +
Preference number: 6 (lower is better)
Translates to: LTWNACHCQGYR*CNWQGVCSSHL
Trigger: CAAGTGGCTGGAACAAACACCTTGCCAGTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 72 bp AACGCCTGCCACTGTCAAGGCTATAGGTGCTGTAACTaGCAAGGTGTTTGTTCCAGCCACTTGAGTAAGGAC +
Preference number: 6 (lower is better)
Translates to: NACHCQGYRCCN*QGVCSSHLSKD
Trigger: GTCCTTACTCAAGTGGCTGGAACAAACACCTTGCCAGTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 72 bp ATGTCTGTTCTAGCAAGCCCGCTTTCTTTGGCCAACTaGTCATACTCTTCTGGTGATGGCCACTGTGTCCGG +
Preference number: 6 (lower is better)
Translates to: MSVLASPLSLAN*SYSSGDGHCVR
Trigger: CCGGACACAGTGGCCATCACCAGAAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTGCTAGAACAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 90 bp CAAGGCTATAGGTGCTGTAACTGGCAAGGTGTTTGTTCCAGCCACTaGAGTAAGGACCAGACCAGGCTGACCAACTATTTGGCATGTCTG +
Preference number: 6 (lower is better)
Translates to: QGYRCCNWQGVCSSH*SKDQTRLTNYLACL
Trigger: CAGACATGCCAAATAGTTGGTCAGCCTGGTCTGGTCCTTACTCAAGTGGCTGGAACAAACACCTTGCCAGTTACAGCACCTATAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 90 bp TCCCCAAACCAACTAACTATGTCTGTTCTAGCAAGCCCGCTTTCTTaGGCCAACTTGTCATACTCTTCTGGTGATGGCCACTGTGTCCGG +
Preference number: 6 (lower is better)
Translates to: SPNQLTMSVLASPLS*ANLSYSSGDGHCVR
Trigger: CCGGACACAGTGGCCATCACCAGAAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTGCTAGAACAGACATAGTTAGTTGGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 72 bp AGTTATCACCTGTGCCAATCCAGGAAGAACTGCTGCTaGTGTCACTACCGTGCTGGCAGTACTTGGATGTAT +
Preference number: 6 (lower is better)
Translates to: SYHLCQSRKNCC*CHYRAGSTWMY
Trigger: ATACATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGATTGGCACAGGTGATAACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp CCAATCCAGGAAGAACTGCTGCTGGTGTCACTACCGTaGTGGCAGTACTTGGATGTATTCTGTTTACAATGG +
Preference number: 6 (lower is better)
Translates to: PIQEELLLVSLP*WQYLDVFCLQW
Trigger: CCATTGTAAACAGAATACATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp AGAATTCTGCTGAGCAGATACAGCAGTTATCACCTGTaGCAATCCAGGAAGAACTGCTGCTGGTGTCACTAC +
Preference number: 6 (lower is better)
Translates to: RILLSRYSSYHL*QSRKNCCWCHY
Trigger: GTAGTGACACCAGCAGCAGTTCTTCCTGGATTGGCACAGGTGATAACTGCTGTATCTGCTCAGCAGAATTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp ATGTTTGACACTTTGAGAAGTTGGAACTGCTGCTGTTaGTGGCTTTGTTTCTGCAGTAGGCTGAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: MFDTLRSWNCCC*WLCFCSRLSSR
Trigger: CCTGCTGCTCAGCCTACTGCAGAAACAAAGCCAGCAACAGCAGCAGTTCCAACTTCTCAAAGTGTCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 90 bp CAACTAACTATGTCTGTTCTAGCAAGCCCGCTTTCTTTGGCCAACTaGTCATACTCTTCTGGTGATGGCCACTGTGTCCGGACAAATGCA +
Preference number: 6 (lower is better)
Translates to: QLTMSVLASPLSLAN*SYSSGDGHCVRTNA
Trigger: TGCATTTGTCCGGACACAGTGGCCATCACCAGAAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTGCTAGAACAGACATAGTTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 90 bp TGCAGTAGGCTGAGCAGCAGGTACCTGACTTTTCTGTATATTATTTaGACTTGGAACGCCTGCCACTGTCAAGGCTATAGGTGCTGTAAC +
Preference number: 6 (lower is better)
Translates to: CSRLSSRYLTFLYII*TWNACHCQGYRCCN
Trigger: GTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAAAATAATATACAGAAAAGTCAGGTACCTGCTGCTCAGCCTACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp AAAGTCAGGAAAAGGATTCCAGGATTGCTTAGGCTGTaGAGTACCAACAGTTGGGGATTCCGTGGTTTCATC +
Preference number: 6 (lower is better)
Translates to: KVRKRIPGLLRL*STNSWGFRGFI
Trigger: GATGAAACCACGGAATCCCCAACTGTTGGTACTGCACAGCCTAAGCAATCCTGGAATCCTTTTCCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 72 bp ATCCAGGAAGAACTGCTGCTGGTGTCACTACCGTGCTaGCAGTACTTGGATGTATTCTGTTTACAATGGAAG +
Preference number: 6 (lower is better)
Translates to: IQEELLLVSLPC*QYLDVFCLQWK
Trigger: CTTCCATTGTAAACAGAATACATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCTTCCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 72 bp ATCTTGTTCACTGGCAAGGACCATGCAAGGTGTTGTTaGTTTTCGCCTGCTTGCCATTCTGATGTTATGAGG +
Preference number: 6 (lower is better)
Translates to: ILFTGKDHARCC*FSPACHSDVMR
Trigger: CCTCATAACATCAGAATGGCAAGCAGGCGAAAATCAACAACACCTTGCATGGTCCTTGCCAGTGAACAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522595.5
ENST00000522655.5
CDS GCA 72 bp TACAGTATGCACTGTTCCATTGAATTGTTTCCTTCTTaGCTCCTCTACTTCCTCGGGAGTCCAACTAACACC +
Preference number: 6 (lower is better)
Translates to: YSMHCSIELFPS*LLYFLGSPTNT
Trigger: GGTGTTAGTTGGACTCCCGAGGAAGTAGAGGAGGCAAGAAGGAAACAATTCAATGGAACAGTGCATACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 72 bp ATTCCAGGATTGCTTAGGCTGTGCAGTACCAACAGTTaGGGATTCCGTGGTTTCATCACTGGAGTCTATAAT +
Preference number: 6 (lower is better)
Translates to: IPGLLRLCSTNS*GFRGFITGVYN
Trigger: ATTATAGACTCCAGTGATGAAACCACGGAATCCCCAACTGTTGGTACTGCACAGCCTAAGCAATCCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 72 bp AATCTGATATCAACTCAAGGTCTGGATCTTGTTCACTaGCAAGGACCATGCAAGGTGTTGTTGATTTTCGCC +
Preference number: 6 (lower is better)
Translates to: NLISTQGLDLVH*QGPCKVLLIFA
Trigger: GGCGAAAATCAACAACACCTTGCATGGTCCTTGCCAGTGAACAAGATCCAGACCTTGAGTTGATATCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522595.5
ENST00000522655.5
CDS CAA 90 bp AATAACAGTTATGGTCTGAGGTACAGTATGCACTGTTCCATTGAATaGTTTCCTTCTTGCCTCCTCTACTTCCTCGGGAGTCCAACTAAC +
Preference number: 6 (lower is better)
Translates to: NNSYGLRYSMHCSIE*FPSCLLYFLGSPTN
Trigger: GTTAGTTGGACTCCCGAGGAAGTAGAGGAGGCAAGAAGGAAACAATTCAATGGAACAGTGCATACTGTACCTCAGACCATAACTGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 72 bp TCATCTGTAAGTACAGAGCTGTTGAGAAAACTTGCCTaGAGGACACGAAGCTGCTCTGCAGTTTTCTCTTTA +
Preference number: 6 (lower is better)
Translates to: SSVSTELLRKLA*RTRSCSAVFSL
Trigger: TAAAGAGAAAACTGCAGAGCAGCTTCGTGTCCTTCAGGCAAGTTTTCTCAACAGCTCTGTACTTACAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 72 bp ATTCTCCTTCAACGTTTTAGGCAGATTTCAGTCATCTaGTTTAGACAGCTTCCGTTTCACATGTCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: ILLQRFRQISVI*FRQLPFHMSWR
Trigger: CCTCCACGACATGTGAAACGGAAGCTGTCTAAATCAGATGACTGAAATCTGCCTAAAACGTTGAAGGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp CTGACTTTTCTGTATATTATTTTGACTTGGAACGCCTaGCACTGTCAAGGCTATAGGTGCTGTAACTGGCAA +
Preference number: 6 (lower is better)
Translates to: LTFLYIILTWNA*HCQGYRCCNWQ
Trigger: TTGCCAGTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTTCCAAGTCAAAATAATATACAGAAAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 72 bp TGTCTGAATCCACAGATTCATGAACCTCTTCATCACTaGAGATACTCTCTGCTCTGGTGTTTTCTACAGGTG +
Preference number: 6 (lower is better)
Translates to: CLNPQIHEPLHH*RYSLLWCFLQV
Trigger: CACCTGTAGAAAACACCAGAGCAGAGAGTATCTCAAGTGATGAAGAGGTTCATGAATCTGTGGATTCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522595.5
ENST00000522655.5
CDS TCA 72 bp CAAATGAATCAGGGTTTACCAATGCAGTTTCATGTTTaGCACTTTGAGAAGTTGGAACTGCTGCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: QMNQGLPMQFHV*HFEKLELLLLL
Trigger: CAGCAACAGCAGCAGTTCCAACTTCTCAAAGTGTCAAACATGAAACTGCATTGGTAAACCCTGATTCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 72 bp TGCAAACCACTCTCTGACCTGCTCATAGCCCATATGTaGTTTGTTAACAAGTTCATCAAGGTCTTGCTCATT +
Preference number: 6 (lower is better)
Translates to: CKPLSDLLIAHM*FVNKFIKVLLI
Trigger: AATGAGCAAGACCTTGATGAACTTGTTAACAAATCACATATGGGCTATGAGCAGGTCAGAGAGTGGTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 72 bp CCTGTGGAAATGTGTGTAGGAATAACAGTTATGGTCTaGGGTACAGTATGCACTGTTCCATTGAATTGTTTC +
Preference number: 6 (lower is better)
Translates to: PVEMCVGITVMV*GTVCTVPLNCF
Trigger: GAAACAATTCAATGGAACAGTGCATACTGTACCTCAGACCATAACTGTTATTCCTACACACATTTCCACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 72 bp ATGGTGGTAGAGGAATCATTGTTGAGATGTAAGCACTaGTTACTCTTTGAATTTCTCTGGTTGTACCTTGTG +
Preference number: 6 (lower is better)
Translates to: MVVEESLLRCKH*LLFEFLWLYLV
Trigger: CACAAGGTACAACCAGAGAAATTCAAAGAGTAATCAGTGCTTACATCTCAACAATGATTCCTCTACCACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS TCA 72 bp TCTTTTCCTAAGGGAAGACAGACCATTCATACTACTTaGATTGGCGCTCTGATAGTAGTAGTACCATTTCAA +
Preference number: 6 (lower is better)
Translates to: SFPKGRQTIHTT*IGALIVVVPFQ
Trigger: TTGAAATGGTACTACTACTATCAGAGCGCCAATTCAAGTAGTATGAATGGTCTGTCTTCCCTTAGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp GATATTCCCGAAGAAGAAACTTCTGTAGATTCTGCTTaGTCTGCATTCTCCTCTTTAACAAAACTACCATCA +
Preference number: 6 (lower is better)
Translates to: DIPEEETSVDSA*SAFSSLTKLPS
Trigger: TGATGGTAGTTTTGTTAAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGAAGTTTCTTCTTCGGGAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS GCA 72 bp GATAGATATTCCCGAAGAAGAAACTTCTGTAGATTCTaGTTGCTCTGCATTCTCCTCTTTAACAAAACTACC +
Preference number: 6 (lower is better)
Translates to: DRYSRRRNFCRF*LLCILLFNKTT
Trigger: GGTAGTTTTGTTAAAGAGGAGAATGCAGAGCAAGCAGAATCTACAGAAGTTTCTTCTTCGGGAATATCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CCA 72 bp TTTTGTGCTCAACAAGTCTCATTAGCAGCTTTCTCATaGTGCAATCAAGTAAAGAGCTTATTGTTGGCAGAT +
Preference number: 6 (lower is better)
Translates to: FCAQQVSLAAFS*CNQVKSLLLAD
Trigger: ATCTGCCAACAATAAGCTCTTTACTTGATTGCACCATGAGAAAGCTGCTAATGAGACTTGTTGAGCACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522595.5
ENST00000522655.5
ENST00000524267.5
CDS CAA 72 bp GATTCATCTGCAGGAGAAGTTTCTCCAGCTTCTTCTTaGGAACTACCTGCATTACTTTCATCTATTTCCATT +
Preference number: 6 (lower is better)
Translates to: DSSAGEVSPASS*ELPALLSSISI
Trigger: AATGGAAATAGATGAAAGTAATGCAGGTAGTTCCAAAGAAGAAGCTGGAGAAACTTCTCCTGCAGATGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 90 bp TTCTTCTTCTCTGTAAACCAAGCATCGATTTCTCTTCTGGTAAGTTaGGTTTGTGCCCTTAACCTATTTAATTCTTCATCTGTAAGTACA +
Preference number: 6 (lower is better)
Translates to: FFFSVNQASISLLVS*VCALNLFNSSSVST
Trigger: TGTACTTACAGATGAAGAATTAAATAGGTTAAGGGCACAAACCAAACTTACCAGAAGAGAAATCGATGCTTGGTTTACAGAGAAGAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5
CDS CAA 72 bp TCTGTAAACCAAGCATCGATTTCTCTTCTGGTAAGTTaGGTTTGTGCCCTTAACCTATTTAATTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: SVNQASISLLVS*VCALNLFNSSS
Trigger: AGATGAAGAATTAAATAGGTTAAGGGCACAAACCAAACTTACCAGAAGAGAAATCGATGCTTGGTTTACAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297857.3
ENST00000395571.8
ENST00000522655.5