RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFYVE26 (Homo sapiens)

Ensembl gene IDs: ENSG00000072121

Ensembl transcript IDs: ENST00000347230.9, ENST00000394455.6, ENST00000553399.1, ENST00000554523.5, ENST00000554557.5, ENST00000554783.1, ENST00000555452.1, ENST00000557306.1, ENST00000557366.5, ENST00000557407.1, ENST00000676512.1, ENST00000676620.1, ENST00000677026.1, ENST00000678382.1, ENST00000678386.1

Found 2887 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACTGCTGTTGCCCAGCTCTCAGGCCACGTGTTCCTGGCCCCACTaGCCAAGGTCACTTCCTGGAGCCTGGGCCATGGGCACCCCGGGG +
Preference number: 1 (lower is better)
Translates to: SLLLPSSQATCSWPH*PRSLPGAWAMGTPG
Trigger: CCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTGAGAGCTGGGCAACAGCAGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp GCATCGCCATCACTGCTGTTGCCCAGCTCTCAGGCCACGTGTTCCTaGCCCCACTGCCCAAGGTCACTTCCTGGAGCCTGGGCCATGGGC +
Preference number: 1 (lower is better)
Translates to: ASPSLLLPSSQATCS*PHCPRSLPGAWAMG
Trigger: GCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp ATCTGCACAGGGTGGGCCTCTGCCTCTGGAGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGTGGAGGAGTCCTGGGCTCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: ICTGWASASGAFWAA*STREDSGGVLGSGS
Trigger: GCTGCCAGAGCCCAGGACTCCTCCACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCACCCTGTGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp CTGGATCTGCACAGGGTGGGCCTCTGCCTCTGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGACAGTGGAGGAGTCCTGGGCTCTGG +
Preference number: 1 (lower is better)
Translates to: LDLHRVGLCLWSFLG*LLHQGRQWRSPGLW
Trigger: CCAGAGCCCAGGACTCCTCCACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCACCCTGTGCAGATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp GGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCTGGTATCTTCGGGAAGGTTGCTCCT +
Preference number: 1 (lower is better)
Translates to: GHLPGSFLSDDPGGD*GDVWQAGIFGKVAP
Trigger: AGGAGCAACCTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp GCCACTGGGCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTaGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTGAGT +
Preference number: 1 (lower is better)
Translates to: ATGHRCLALLHPRCS*RPAAPAGQGLWPVS
Trigger: ACTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp AGTCCCACTCCACTGGAGGAAAGAGGTGGAGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGGCCACGTGTTCCTGGCCCCACTGCC +
Preference number: 1 (lower is better)
Translates to: SPTPLEERGGGHRHH*CCPALRPRVPGPTA
Trigger: GGCAGTGGGGCCAGGAACACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR GCA 90 bp TCAGAAGCCACTGGGCACAGATGTCTTGCACTACTGCATCCCCGCTaGTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCC +
Preference number: 1 (lower is better)
Translates to: SEATGHRCLALLHPR*SWRPAAPAGQGLWP
Trigger: GGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAGTGGCTTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp GCCCAAGGTCACTTCCTGGAGCCTGGGCCATGGGCACCCCGGGGGTaGCTTGTCAGAAGCCACTGGGCACAGATGTCTTGCACTACTGCA +
Preference number: 1 (lower is better)
Translates to: AQGHFLEPGPWAPRG*LVRSHWAQMSCTTA
Trigger: TGCAGTAGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp TCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTaGCGTGTGGCAGGCTGGTATCTTCGGGAAGGTTGCTCCTCTGAA +
Preference number: 1 (lower is better)
Translates to: SAWLLLVRRPRRRLG*RVAGWYLREGCSSE
Trigger: TTCAGAGGAGCAACCTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR TCA 90 bp GTCCTCGGGGAGCTCGGTGTAGAAAGTGGGAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCCAGAGTACCCAGACGAGTCAGGAGG +
Preference number: 1 (lower is better)
Translates to: VLGELGVESGRSSRQ*EACSWARVPRRVRR
Trigger: CCTCCTGACTCGTCTGGGTACTCTGGCCCAGCTACACGCCTCTCACTGCCTGGATGACCTCCCACTTTCTACACCGAGCTCCCCGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp GCAGCAGTGAGGTTCCCGGCTTTGAGGCAGGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCA +
Preference number: 1 (lower is better)
Translates to: AAVRFPALRQAMPQA*HAPVVSSPVFVETS
Trigger: TGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGGCGTGGCATGCTTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCACTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp GGGGTGGCTTGTCAGAAGCCACTGGGCACAGATGTCTTGCACTACTaGATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAG +
Preference number: 1 (lower is better)
Translates to: GVACQKPLGTDVLHY*IPAALGGLLHLLDK
Trigger: CTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAGCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGGAAGGTTGCTCCTCTGAACGATGGT +
Preference number: 1 (lower is better)
Translates to: GSFLSDDPGGDWGDV*QAGIFGKVAPLNDG
Trigger: ACCATCGTTCAGAGGAGCAACCTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp GTCCTGTGCAGGGTCTGGAGCAGCCTCTTGGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGGAGTACAAGCAGGCAACTGAGGGGC +
Preference number: 1 (lower is better)
Translates to: VLCRVWSSLLADSRL*QCVQPRSTSRQLRG
Trigger: GCCCCTCAGTTGCCTGCTTGTACTCCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGACCCTGCACAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR TCA 90 bp ACCCAGACGAGTCAGGAGGGAGGAGGTCTGCTGGCTTTGCCGGGATaGGCAAAGAGCAAGGGGCTCACAGCAGCAGCTGACGATGACCTG +
Preference number: 1 (lower is better)
Translates to: TQTSQEGGGLLALPG*AKSKGLTAAADDDL
Trigger: CAGGTCATCGTCAGCTGCTGCTGTGAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCTGACTCGTCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp TGTAGCTGGGCCAGAGTACCCAGACGAGTCAGGAGGGAGGAGGTCTaGTGGCTTTGCCGGGATGAGCAAAGAGCAAGGGGCTCACAGCAG +
Preference number: 1 (lower is better)
Translates to: CSWARVPRRVRREEV*WLCRDEQRARGSQQ
Trigger: CTGCTGTGAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCTGACTCGTCTGGGTACTCTGGCCCAGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp CAGCAGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCTGGGGGCACAAATTCCTGTGAGGGC +
Preference number: 1 (lower is better)
Translates to: QQTMQILSVSSGTHW*LAGGVAGGTNSCEG
Trigger: GCCCTCACAGGAATTTGTGCCCCCAGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp TCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTaGTGGACAAGGGCTGTGGCCCGTGAGTGTTCTTGCTTCACAGCA +
Preference number: 1 (lower is better)
Translates to: SCTTASPLLLAACCT*WTRAVARECSCFTA
Trigger: TGCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp CCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTaGCCCGTGAGTGTTCTTGCTTCACAGCAATCAAGTAGGCAGAAC +
Preference number: 1 (lower is better)
Translates to: PRCSWRPAAPAGQGL*PVSVLASQQSSRQN
Trigger: GTTCTGCCTACTTGATTGCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp TGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTaGACAAGGGCTGTGGCCCGTGAGTGTTCTTGCTTCACAGCAATC +
Preference number: 1 (lower is better)
Translates to: CTTASPLLLAACCTC*TRAVARECSCFTAI
Trigger: GATTGCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp TGCAGCACCTGGGGAGGAGAGAGAGTCATTCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAGGCTGTCTTTGCAGTCCTGGCACTG +
Preference number: 1 (lower is better)
Translates to: CSTWGGERVIRWLCS*GQVLREAVFAVLAL
Trigger: CAGTGCCAGGACTGCAAAGACAGCCTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCGAATGACTCTCTCTCCTCCCCAGGTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR GCA 90 bp CTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGCTGCTACCCGCATCTGAGTTCTGGT +
Preference number: 1 (lower is better)
Translates to: LLLQRCQWPVELSGH*QFSEWCCYPHLSSG
Trigger: ACCAGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp CCTCTCTCAGTGACTGAAGGACCTGATCTAGCTGCTGGGAGAGGGTaGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGCACA +
Preference number: 1 (lower is better)
Translates to: PLSVTEGPDLAAGRG*CGWQHSPRLGWAST
Trigger: TGTGCTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCAGCTAGATCAGGTCCTTCAGTCACTGAGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp CTGCAGCAGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTCGCTGGGGGCACAAATTCCTGTGAG +
Preference number: 1 (lower is better)
Translates to: LQQTMQILSVSSGTH*CLAGGVAGGTNSCE
Trigger: CTCACAGGAATTTGTGCCCCCAGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCTGCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp TGGAGAGCCTGCAGCAGTGCTCAATCAGCTGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGC +
Preference number: 1 (lower is better)
Translates to: WRACSSAQSAGDHRQ*CPGADSGWQCTRRR
Trigger: GCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCACTGCTGCAGGCTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp CTCTGGCCGGCTTTGACGAACATCATCTTGGCGCTGAACAGCAGCTaGTTCATGATGTCCGTGAGCAGCCCGGCATCCACCTCTGGGTTG +
Preference number: 1 (lower is better)
Translates to: LWPALTNIILALNSS*FMMSVSSPASTSGL
Trigger: CAACCCAGAGGTGGATGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp ATTGAGGTCAAATGGGGGCTTCAGACAGCGACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGCTTTGAGGCAGGCCATGCCCCAAGC +
Preference number: 1 (lower is better)
Translates to: IEVKWGLQTATELLP*SSEVPGFEAGHAPS
Trigger: GCTTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGCCCCCATTTGACCTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp GTGACTGAAGGACCTGATCTAGCTGCTGGGAGAGGGTGGTGTGGCTaGCAACACAGTCCTCGCTTAGGCTGGGCCAGCACATCTGAAGCA +
Preference number: 1 (lower is better)
Translates to: VTEGPDLAAGRGWCG*QHSPRLGWASTSEA
Trigger: TGCTTCAGATGTGCTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCAGCTAGATCAGGTCCTTCAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp CGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATC +
Preference number: 1 (lower is better)
Translates to: RCRRLCSPSLLPEQL*LSCFGFSGGLRLLI
Trigger: GATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR TCA 90 bp CACAGTCCTCGCTTAGGCTGGGCCAGCACATCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGCCTCCTCCCTTTTCTTCCACACTCT +
Preference number: 1 (lower is better)
Translates to: HSPRLGWASTSEAVQ*CCTVEGLLPFLPHS
Trigger: AGAGTGTGGAAGAAAAGGGAGGAGGCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAGCCTAAGCGAGGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp TTGGTGAGGCCCTTGGAGAGCCTGCAGCAGTGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATG +
Preference number: 1 (lower is better)
Translates to: LVRPLESLQQCSISW*PQAMLSRCRFRMAM
Trigger: CATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCACTGCTGCAGGCTCTCCAAGGGCCTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp GCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTaGGTGTTCTTGCTTCACAGCAATCAAGTAGGCAGAACGCAGTTT +
Preference number: 1 (lower is better)
Translates to: ALGGLLHLLDKGCGP*VFLLHSNQVGRTQF
Trigger: AAACTGCGTTCTGCCTACTTGATTGCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp TGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTG +
Preference number: 1 (lower is better)
Translates to: CLSPPCVSTGPQRQP*KVDAGGSAVHLCFL
Trigger: CAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp TGCTCCTCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: CSSERWLLVTTLCLH*ASETTLESRCRRLC
Trigger: GCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp CAGCAGCTGACGATGACCTGTGGCACACTTAGGCTGAGATTCTCTTaGGCCAGAAGGGCTGCCAGTCTCTCTGGGGGAACTTGTCTCTCA +
Preference number: 1 (lower is better)
Translates to: QQLTMTCGTLRLRFS*ARRAASLSGGTCLS
Trigger: TGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAAGAGAATCTCAGCCTAAGTGTGCCACAGGTCATCGTCAGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATaGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LAPWLLPGPCSNNSE*TSSWVRSWTPSQAR
Trigger: CCTGGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR CCA 90 bp ATGAGGCCCTGGGTAACTGTCTTTTGGCTCTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCG +
Preference number: 1 (lower is better)
Translates to: MRPWVTVFWLCLHMA*HCISKGLWDSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGTTACCCAGGGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp GGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCCCCTATTGCAAATTCATCAGCCAGA +
Preference number: 1 (lower is better)
Translates to: GFSGGLRLLISSSCS*RSLRKAPIANSSAR
Trigger: TCTGGCTGATGAATTTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp GTCCTCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTaGGGGAGACTGCAAACCCAGAATCTTCTGATACACCTGCAGCTC +
Preference number: 1 (lower is better)
Translates to: VLNTTAPQGLPVTPH*GRLQTQNLLIHLQL
Trigger: GAGCTGCAGGTGTATCAGAAGATTCTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp TGTCTCAGCATCATGGATGGGACCAATAGGCTGAGCTCTGGCCAGTaGGAGGTTCAGAGCTGCAGAGCTTTCTTTAGGCCCCACATTTGC +
Preference number: 1 (lower is better)
Translates to: CLSIMDGTNRLSSGQ*EVQSCRAFFRPHIC
Trigger: GCAAATGTGGGGCCTAAAGAAAGCTCTGCAGCTCTGAACCTCTCACTGGCCAGAGCTCAGCCTATTGGTCCCATCCATGATGCTGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR GCA 90 bp CCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTaGAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGTGAGCAC +
Preference number: 1 (lower is better)
Translates to: PRLSKRKSHSLTHQL*SRDIHNRQLCACEH
Trigger: GTGCTCACAAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR GCA 90 bp TCTGTAGCTCACACTTTAGTCCTTCTTGGACAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCAGGCATGACTCCAGGGGCCACCTGT +
Preference number: 1 (lower is better)
Translates to: SVAHTLVLLGQPCLK*SRPESPGMTPGATC
Trigger: ACAGGTGGCCCCTGGAGTCATGCCTGGAGATTCTGGCCTACTGCATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTGTGAGCTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp CGCCCAGTTGGTAGTACTCGGCTTCCAAAAGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCAAGATCTGATCCAAAGATGGCACGT +
Preference number: 1 (lower is better)
Translates to: RPVGSTRLPKAGSLA*LLQLAARSDPKMAR
Trigger: ACGTGCCATCTTTGGATCAGATCTTGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGAGTACTACCAACTGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp GGCTGCCAGTCTCTCTGGGGGAACTTGTCTCTCAAACAGGAGATGTaGCACCAGTTGGGAAGAGCTCTGTTGCAGCAGAACAAAGGGATT +
Preference number: 1 (lower is better)
Translates to: GCQSLWGNLSLKQEM*HQLGRALLQQNKGI
Trigger: AATCCCTTTGTTCTGCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp AGGGTATGGAAAGTCCAGGGCTTTCTCTGCGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCAG +
Preference number: 1 (lower is better)
Translates to: RVWKVQGFLCVSGKQ*VHLVHSEANLLSNQ
Trigger: CTGGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAGCCCTGGACTTTCCATACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp GCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGCCTaGCTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTT +
Preference number: 1 (lower is better)
Translates to: AVEEDGVPVTFGCHA*LTDTFEQLLDLTVL
Trigger: AAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp CTCAGAGAGGCTGTCTTTGCAGTCCTGGCACTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATAGATGGCATACTTCATGGCACAGAA +
Preference number: 1 (lower is better)
Translates to: LREAVFAVLALGVLV*VYTEGIDGILHGTE
Trigger: TTCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR GCA 90 bp TGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGGAAGGCCCCTATTGCAAATTCATCA +
Preference number: 1 (lower is better)
Translates to: CFGFSGGLRLLISSS*SWRSLRKAPIANSS
Trigger: TGATGAATTTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR GCA 90 bp TGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCTGGTTTTCAATCTTGTGCTCTACTT +
Preference number: 1 (lower is better)
Translates to: WPVELSGHCQFSEWC*YPHLSSGFQSCALL
Trigger: AAGTAGAGCACAAGATTGAAAACCAGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR GCA 90 bp TTCATGACAGTTGATGGGTCCTCAACACAACAGCTCCTCAAGGTCTaGCAGTCACACCACACTGGGGGAGACTGCAAACCCAGAATCTTC +
Preference number: 1 (lower is better)
Translates to: FMTVDGSSTQQLLKV*QSHHTGGDCKPRIF
Trigger: GAAGATTCTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGAGGACCCATCAACTGTCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp CCAGGCACAGAGAGTCAGGAATACTGCACAGATACTGTTGACACCTaGCCAGGTAAGTTGAGAAGAGATTTGCAGCACCTGGGGAGGAGA +
Preference number: 1 (lower is better)
Translates to: PGTESQEYCTDTVDT*PGKLRRDLQHLGRR
Trigger: TCTCCTCCCCAGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTCTGTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR TCA 90 bp CCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTaGCTCCCTTTTCTAAGACAGAGAAAAGAAGCGCACTCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: PHSDSVQRPNSKANP*LPFLRQRKEAHSLP
Trigger: GGGAAGGGAGTGCGCTTCTTTTCTCTGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR GCA 90 bp CAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGCTGCTTaGAGGTTTTCCAGAGCTGGCACTGAGAGCAAGCTAGGTCAAATG +
Preference number: 1 (lower is better)
Translates to: QGYYSNAVRLSPKAA*RFSRAGTESKLGQM
Trigger: CATTTGACCTAGCTTGCTCTCAGTGCCAGCTCTGGAAAACCTGCAAGCAGCTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp CCACTGCCAGTTCTCCGAATGGTGCTGCTACCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCTACTTGGGCCAGTTCTTGGATCACT +
Preference number: 1 (lower is better)
Translates to: PLPVLRMVLLPASEF*FSILCSTWASSWIT
Trigger: AGTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 90 bp AGTGCTGGTGTGAGTTTACACAGAGGGCATAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCA +
Preference number: 1 (lower is better)
Translates to: SAGVSLHRGHRWHTS*HRSPGRVSGSDTGS
Trigger: TGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR TCA 90 bp ATGTGGTTATTTCCAAACAGGGTTGGCAGAGGCAAAGTGGTGATTTaGGAGGTCCCAGCACTTTCGCACCGATGCAAGAACCTGGTCACT +
Preference number: 1 (lower is better)
Translates to: MWLFPNRVGRGKVVI*EVPALSHRCKNLVT
Trigger: AGTGACCAGGTTCTTGCATCGGTGCGAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAATAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp CAAAAAGCTGTGCCTATGAGGCCCTGGGTAACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCATTGTATAAGCAAGGGTCTTTGGGAC +
Preference number: 1 (lower is better)
Translates to: QKAVPMRPWVTVFWL*LHMAWHCISKGLWD
Trigger: GTCCCAAAGACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCACAGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR GCA 90 bp TTCCTGGTAGTAGGTGTTGTTCATGATTTTCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGTCCGAAGGGTAGCTTCCAGTTCCCT +
Preference number: 1 (lower is better)
Translates to: FLVVGVVHDFPFRNH*QRKALRPKGSFQFP
Trigger: AGGGAACTGGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGGAAAATCATGAACAACACCTACTACCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp GATAAAGACTTGGGAAGGCAAAGACGCATGCAGTCCATGTTCACCTaGTCCTCATCTATTCCCTCCTTTCTACACCCCTATCCAAGCCTC +
Preference number: 1 (lower is better)
Translates to: DKDLGRQRRMQSMFT*SSSIPSFLHPYPSL
Trigger: GAGGCTTGGATAGGGGTGTAGAAAGGAGGGAATAGATGAGGAGCAGGTGAACATGGACTGCATGCGTCTTTGCCTTCCCAAGTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CCA 90 bp CTCTCTGGGGGAACTTGTCTCTCAAACAGGAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGCAGAACAAAGGGATTTCCTACCTTG +
Preference number: 1 (lower is better)
Translates to: LSGGTCLSNRRCDTS*EELCCSRTKGFPTL
Trigger: CAAGGTAGGAAATCCCTTTGTTCTGCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp TGGCAAAGTAATCGTCATCTTGCAAGGATACAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCACATCCTGCACCAGCCTTGAGCCAT +
Preference number: 1 (lower is better)
Translates to: WQSNRHLARIQRASL*TLGTQPHPAPALSH
Trigger: ATGGCTCAAGGCTGGTGCAGGATGTGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTGTATCCTTGCAAGATGACGATTACTTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp TGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTaGTCATTTATACACATACCCACAGCTTTCAGATGCCTGCACCTG +
Preference number: 1 (lower is better)
Translates to: WLAFLSLLPVLASQT*SFIHIPTAFRCLHL
Trigger: CAGGTGCAGGCATCTGAAAGCTGTGGGTATGTGTATAAATGATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 90 bp TTTTCATGTGGTTATTTCCAAACAGGGTTGGCAGAGGCAAAGTGGTaGTTTGAGAGGTCCCAGCACTTTCGCACCGATGCAAGAACCTGG +
Preference number: 1 (lower is better)
Translates to: FSCGYFQTGLAEAKW*FERSQHFRTDARTW
Trigger: CCAGGTTCTTGCATCGGTGCGAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAATAACCACATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 90 bp CTCAGAAGGGCAAGCAGACGCCAGAGAAGGACATTTCCTGGGAGATaGATACGTTCTATGACTCAAGGAAGGAAAAGCCAAACTTTAGCC +
Preference number: 1 (lower is better)
Translates to: LRRASRRQRRTFPGR*IRSMTQGRKSQTLA
Trigger: GGCTAAAGTTTGGCTTTTCCTTCCTTGAGTCATAGAACGTATCCATCTCCCAGGAAATGTCCTTCTCTGGCGTCTGCTTGCCCTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CCA 90 bp CTCAGCTCCACCTCTGATAATACAGAAGCTGAGATACGGGTTGTATaGAACTATTGTGGGGAGCAAGGGATAAAGGTGACTAGGCAAGCC +
Preference number: 1 (lower is better)
Translates to: LSSTSDNTEAEIRVV*NYCGEQGIKVTRQA
Trigger: GGCTTGCCTAGTCACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTCTGTATTATCAGAGGTGGAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR TCA 90 bp CTCTTAACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATaGAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGC +
Preference number: 1 (lower is better)
Translates to: LLTTIRFCCMFWQKE*NMPLLVRAVIWDLG
Trigger: GCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR GCA 90 bp CACAATTTTAGAGAAACATGGCACTTGCGTGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGGTCCAATCCAACTCTTTCCAACCTA +
Preference number: 1 (lower is better)
Translates to: HNFRETWHLRERSYP*PGRQVGSNPTLSNL
Trigger: TAGGTTGGAAAGAGTTGGATTGGACCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR GCA 90 bp GACATGTTTGTCTTGGGGATAAAGACTTGGGAAGGCAAAGACGCATaGAGTCCATGTTCACCTGCTCCTCATCTATTCCCTCCTTTCTAC +
Preference number: 1 (lower is better)
Translates to: DMFVLGIKTWEGKDA*SPCSPAPHLFPPFY
Trigger: GTAGAAAGGAGGGAATAGATGAGGAGCAGGTGAACATGGACTGCATGCGTCTTTGCCTTCCCAAGTCTTTATCCCCAAGACAAACATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR TCA 90 bp AAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTaGGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTC +
Preference number: 1 (lower is better)
Translates to: KQTLSNMPKATQDSH*ASHSRDMLLTTIRF
Trigger: GAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR TCA 90 bp GTGTGTTCATGTGCCTTGACACATCAGCTGCAGTCATCTTCTTTCTaGAGAATGTGGTTTTCTTCCTTCCAGAGCTGCGGGATGTTTCTT +
Preference number: 1 (lower is better)
Translates to: VCSCALTHQLQSSSF*RMWFSSFQSCGMFL
Trigger: AAGAAACATCCCGCAGCTCTGGAAGGAAGAAAACCACATTCTTCAGAAAGAAGATGACTGCAGCTGATGTGTCAAGGCACATGAACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 90 bp GTGAGTGTTCTTGCTTCACAGCAATCAAGTAGGCAGAACGCAGTTTaGAACATATCAGGTAGGCCCGAACCTTGTTGTCATCATTGTGTA +
Preference number: 1 (lower is better)
Translates to: VSVLASQQSSRQNAV*NISGRPEPCCHHCV
Trigger: TACACAATGATGACAACAAGGTTCGGGCCTACCTGATATGTTGCAAACTGCGTTCTGCCTACTTGATTGCTGTGAAGCAAGAACACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 90 bp CCTGATCATTTATACACATACCCACAGCTTTCAGATGCCTGCACCTaGAAACCCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTT +
Preference number: 1 (lower is better)
Translates to: PDHLYTYPQLSDACT*KPFYSDYLPKTPGL
Trigger: AAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGAAAGCTGTGGGTATGTGTATAAATGATCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATaGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGC +
Preference number: 1 (lower is better)
Translates to: LLSSSIWGSTIGLAP*LLPGPCSNNSEWTS
Trigger: GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR TCA 90 bp TTTACTACTAAAAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTaGGCACCAGAGACACTGACTTCAGCTTCCAGTTTCTGTTTGTCT +
Preference number: 1 (lower is better)
Translates to: FTTKNLGSEGNPQGF*APETLTSASSFCLS
Trigger: AGACAAACAGAAACTGGAAGCTGAAGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTTTTAGTAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPDPGGD*GDVWQA
Trigger: AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTC...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTTCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQASQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 2 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGC +
Preference number: 2 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPTELLP*SSEVPG
Trigger: GCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGT...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: CWERVVWLATQSSLRLGQGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCGTGGGCCTCTGCCTCTaGAGCTTTCTGGGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: AQMSCTTASPLLLAACCTVGLCL*SFLGCL
Trigger: CAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCAC...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTCATTGTGTATTGCCTaGATCAGGCCCTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPSLCIA*IRPSSS
Trigger: GGAGCTGGAGGGCCTGATCCAGGCAATACACAATGA...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 90 bp GGCACCTCCCTGCGGCCACGAAGTTCCTTCCATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGGGAAGCCCCCAGGCAGGCCACCGTA +
Preference number: 2 (lower is better)
Translates to: GTSLRPRSSFHDKLG*LTFNLGEAPRQATV
Trigger: TACGGTGGCCTGCCTGGGGGCTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGTGGCCGCAGGGAGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 90 bp AGACAGCGACTGAACTTCTCCCGTGCAGCAGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAAGCATGCCACGCCCCGGTGGTATCA +
Preference number: 2 (lower is better)
Translates to: RQRLNFSRAAVRFPA*RQAMPQACHAPVVS
Trigger: TGATACCACCGGGGCGTGGCATGCTTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGTCGCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 90 bp AAGGTCACTTCCTGGAGCCTGGGCCATGGGCACCCCGGGGGTGGCTaGTCAGAAGCCACTGGGCACAGATGTCTTGCACTACTGCATCCC +
Preference number: 2 (lower is better)
Translates to: KVTSWSLGHGHPGGG*SEATGHRCLALLHP
Trigger: GGGATGCAGTAGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCCGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 2 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSRHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGCTCTCAGGGGAGCAGTaGGCTCCACTAGAGCCGTGC +
Preference number: 2 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQLSGEQ*APLEPC
Trigger: GCACGGCTCTAGTGGAGCCCACTGCTCCCCTGAGAG...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCAAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: IILALNSSCFMMSVSSPARSSRQ*EACSWA
Trigger: GGCCCAGCTACACGCCTCTCACTGCCTGGATGACCT...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 2 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHLLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTCAACAGATCTCTCTTTaGTATGGGGTTGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAQQISL*YGVAAL
Trigger: CAGAGCAGCAACCCCATACCAAAGAGAGATCTGTTG...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR TCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 2 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCAGAGAGTGTAGAGCACTaGGTGGCTGTCTCCACCGTG +
Preference number: 2 (lower is better)
Translates to: HWASETTLESRCRRLCSPESVEH*VAVSTV
Trigger: CACGGTGGAGACAGCCACTCAGTGCTCTACACTCTC...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: CWERVVWLATQSSLRLGQFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACGACTGGAGCATCAACTaGATCAGGCTCTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHDWSIN*IRLLLG
Trigger: CCCCAGCAAGAGCCTGATGCAGTTGATGCTCCAGTC...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 2 (lower is better)
Translates to: KFPRRMQDASSDSGGENIDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCGGGTCAGCAGAATCTTaGATCCCACATACAGCGCCT +
Preference number: 2 (lower is better)
Translates to: AQMSCTTASPLLLAACCTGSAES*IPHTAP
Trigger: AGGCGCTGTATGTGGGATCCAAGATTCTGCTGACCC...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCATCCCCGCTGCTCTTaGCGGCCTGCTGCACCTGCT +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEHPRCS*RPAAPA
Trigger: AGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: KFPRRMQDASSDSGGENIADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCTGGCACTGGGAGTGCTaGTGTGAGTTTACACAGAGG +
Preference number: 2 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSWHWEC*CEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCA...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CCA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCTTGCAGTCCTGGCACTaGGAGTGCTGGTGTGAGTTT +
Preference number: 2 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGLQSWH*ECWCEF
Trigger: AAACTCACACCAGCACTCCCAGTGCCAGGACTGCAA...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR CAA 90 bp AAAACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTCTCCGAATGGTGCTGCTACCCGCAT +
Preference number: 2 (lower is better)
Translates to: KTPFLLLQRCQWPVE*SGHCQFSEWCCYPH
Trigger: ATGCGGGTAGCAGCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 90 bp TTCGCTGGCTCTGTAGCTGAGGCCAGGTCCTCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGG +
Preference number: 2 (lower is better)
Translates to: FAGSVAEARSSERLS*QSWHWECWCEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR TCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCCATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGT +
Preference number: 2 (lower is better)
Translates to: AQMSCTTASPLLLAACCTHRSGW*GSWPRS
Trigger: ACTTCTTGGCCAACTACCTCACCACCCACTTCTATG...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 2 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 2 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTAGCTGCTGGAGAGTCTaGACAGCCACAGTGGCCCAA +
Preference number: 2 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSSCWRV*TATVAQ
Trigger: TTGGGCCACTGTGGCTGTGCAGACTCTCCAGCAGCT...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGACTGGCGGGCAGCTCTaGAGTAGGTCATGGCAGCAT +
Preference number: 2 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMTGGQL*SRSWQH
Trigger: ATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGT...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 2 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 2 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQTLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGTCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 2 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMSRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCATGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 2 (lower is better)
Translates to: HWASETTLESRCRRLCSPCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGCCAGTCACACCACACTaGGGGAGACTGCAAACCCAG +
Preference number: 2 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMPVTPH*GRLQTQ
Trigger: CTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGG...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 90 bp CAAAGAGCCAAGTCTTGGCTCTGGCCGGCTTTGACGAACATCATCTaGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCG +
Preference number: 2 (lower is better)
Translates to: QRAKSWLWPALTNII*ALNSSCFMMSVSSP
Trigger: CGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 2 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGAGGGCTGCGGCTACTaGTCTCATCCAGTTGCTCTT +
Preference number: 2 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSEGCGY*SHPVAL
Trigger: AAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCCCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAAC +
Preference number: 2 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCPGSAP*TSVPLN
Trigger: GTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGG...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCCCATGGCAGGGGGACTaGGGTCTTCCAGAACCTCTC +
Preference number: 2 (lower is better)
Translates to: LESSESTSSIVKPISCPTPWQGD*GLPEPL
Trigger: GAGAGGTTCTGGAAGACCTCAGTCCCCCTGCCATGG...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATTCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDSEAVQ*CCTVEG
Trigger: GCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGA...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGCTCTGGCCGGCTTTaGCGAACATCATCTTGGCGC +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGSGRL*RTSSWR
Trigger: GCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTTCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 2 (lower is better)
Translates to: GSSPQCHHPQHSPQASEASRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR TCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQRWLCS*GQVLRE
Trigger: CTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCG...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 2 (lower is better)
Translates to: PATAATMMTPVKHGEVLPTLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: KFPRRMQDASSDSGGENIGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 2 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVLLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 2 (lower is better)
Translates to: STPPFKATIQTPFGCLQKHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTTGGGCCAGAAGGGCTaGCAGTCTCTCTGGGGGAAC +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELGQKG*QSLWGN
Trigger: GTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCATCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: HWASETTLESRCRRLCSPSSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCACCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: IILALNSSCFMMSVSSPAPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 2 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHCSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATTCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 2 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDSRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGGGCTGCCAGTCTCTCTaGGGGAACTTGTCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWGCQSL*GNLSLK
Trigger: TTTGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCC...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGGCATCAGGCTCTTGCTaGGGGTCCTTGGCTGGCACT +
Preference number: 2 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWASGSC*GSLAGT
Trigger: AGTGCCAGCCAAGGACCCCCAGCAAGAGCCTGATGC...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCCAGGTGCTCAGGGACTaGAGCATCAACTGCATCAGG +
Preference number: 2 (lower is better)
Translates to: KFPRRMQDASSDSGGENIQVLRD*SINCIR
Trigger: CCTGATGCAGTTGATGCTCCAGTCCCTGAGCACCTG...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR CAA 90 bp TTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LLVTTLCLHWASETT*ESRCRRLCSPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 90 bp GGCCAAGAAGTGAGAAGTGGCCAAGCTAGTGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCACATGGTGGGGTCAGGGATTCTTCG +
Preference number: 2 (lower is better)
Translates to: GQEVRSGQASVLVEG*LCHFKAHGGVRDSS
Trigger: CGAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCACACTAGCTTGGCCACTTCTCACTTCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTTTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 2 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 2 (lower is better)
Translates to: PATAATMMTPVKHGEVLPNVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATCTGGGCCAGCACATCTaGAGCAGTTCAGTGATGCTG +
Preference number: 2 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDLGQHI*SSSVML
Trigger: CAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAG...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCAGATCGTTTCTCCCTCTaGGGGTATGGAAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: IILALNSSCFMMSVSSPADRFSL*GYGKSR
Trigger: CCTGGACTTTCCATACCCTCAGAGGGAGAAACGATC...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 2 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLRHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGCGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMRCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 2 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCASVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTTGCTGCTCTGCTGTATaGACCACTCCAGGACCTCCA +
Preference number: 2 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLCCSAV*TTPGPP
Trigger: TGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAGCA...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGACTGCATCAGGCTCTTaGTGGGGGTCCTTGGCTGGC +
Preference number: 2 (lower is better)
Translates to: ILHGTEALVECQVLTLAQTASGS*WGSLAG
Trigger: GCCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGT...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: STPPFKATIQTPFGCLQKEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGTGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 2 (lower is better)
Translates to: RWLLVTTLCLHWASETTLCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: GSSPQCHHPQHSPQASEASGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR CAA 90 bp GCCCTGGGTAACTGTCTTTTGGCTCTGCCTTCACATGGCTTGGCATaGTATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTG +
Preference number: 2 (lower is better)
Translates to: ALGNCLLALPSHGLA*YKQGSLGLPGNPVL
Trigger: CAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGTTACCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 90 bp TGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGCCCCTATTGCAAATTCATCAGCCAG +
Preference number: 2 (lower is better)
Translates to: WLLRRAAATDLIQLL*EKPEEGPYCKFISQ
Trigger: CTGGCTGATGAATTTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 2 (lower is better)
Translates to: STPPFKATIQTPFGCLQKQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 2 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAACAAGCTGGGTTTGCTaGCCTTTAACCTCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQTSWVC*PLTSGK
Trigger: CTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGT...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCATTGGACAGCCGTGTCTaGAATGCAGTAGGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: IILALNSSCFMMSVSSPALDSRV*NAVGQN
Trigger: ATTCTGGCCTACTGCATTTCAGACACGGCTGTCCAA...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGT +
Preference number: 2 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSVSGKQ*VHLVHS
Trigger: ACTATGGACGAGGTGGACTCACTGCTTTCCAGATAC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 2 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLRHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 2 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCCTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCLPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: LESSESTSSIVKPISCPTGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 2 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 2 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGTGCTGGTCGAGGGATTaGTCTGTCACTTCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQCWSRD*SVTSRH
Trigger: GTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCA...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGGAGAGTCAGGAATACTaGACAGATACTGTTGACACC +
Preference number: 2 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQESQEY*TDTVDT
Trigger: GGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 2 (lower is better)
Translates to: SERWLLVTTLCLHWASETISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 2 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHCLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 2 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGGCTGAGATTCTCTTaGGCCAGAAGGGCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERLRFS*ARRAAS
Trigger: ACTGGCAGCCCTTCTGGCCCAAGAGAATCTCAGCCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGGAGCTCATCACAGCCTaGGCCCTGGGTCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLELITA*ALGPVQ
Trigger: CTGCACAGGACCCAGGGCCCAGGCTGTGATGAGCTC...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR CAA 90 bp TATGAGGCCCTGGGTAACTGTCTTTTGGCTCTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCC +
Preference number: 2 (lower is better)
Translates to: YEALGNCLLALPSHG*ALYKQGSLGLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGTTACCCAGGGCCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 90 bp ACGTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTaGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGAC +
Preference number: 2 (lower is better)
Translates to: TYLCSAHYLYFPGMG*NLCLGHLPGSFLSD
Trigger: GTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 90 bp TCCCACATACAGCGCCTGGATTTCACGGTGTCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGTGAGGTAGTTGGCCAAGAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: SHIQRLDFTVSDSSQ*SIEVGGEVVGQEVR
Trigger: TCTCACTTCTTGGCCAACTACCTCACCACCCACTTCTATGGACAACTGACTGCTGTCCGACACCGTGAAATCCAGGCGCTGTATGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLENMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 2 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 2 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAACTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTTCAGAGCTCAAACTTTaGAGGAGAACTGCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: PATAATMMTPVKHGEVLPSELKL*RRTAAR
Trigger: CCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGA...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 2 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 2 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGSFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCCTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVLISSS*SWRSLR
Trigger: CCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAG...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 2 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACCCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 2 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGCACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 2 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCCAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 2 (lower is better)
Translates to: LESSESTSSIVKPISCPTQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAGCTCCACTAGAGCCGTaGTTATCCAAAAGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQAPLEP*LSKSPP
Trigger: AGGAGGACTTTTGGATAAGCACGGCTCTAGTGGAGC...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACCTGGAAAACCTCGAATaGCATCAGCATTTAGGAGTA +
Preference number: 2 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHLENLE*HQHLGV
Trigger: TACTCCTAAATGCTGATGGCATTCGAGGTTTTCCAG...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp CAGGGACGAGTTCTTTGGCCCCTGAGGAGAGGTTCATTCTGGAGACCGAGACATCAGTCCATGTTCACCTaGTCCTCATCTATTCCCTCC +
Preference number: 2 (lower is better)
Translates to: QGRVLWPLRRGSFWRPRHQSMFT*SSSIPS
Trigger: GGAGGGAATAGATGAGGAGCAGGTGAACATGGACTG...ATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR CCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCTCTGCACAGCCACAGTaGCCCAATCCACCTTCATGT +
Preference number: 2 (lower is better)
Translates to: LESSESTSSIVKPISCPTSAQPQ*PNPPSC
Trigger: ACATGAAGGTGGATTGGGCCACTGTGGCTGTGCAGA...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGTCGGCTTCCAAAAGCTaGTTCCTTAGCCTGGTTACT +
Preference number: 2 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMSASKS*FLSLVT
Trigger: AGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGA...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 90 bp TGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGTTTGAACCTCTGTCTCGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: WHSDFPLTYLCSAHY*YFPGMGLNLCLGHL
Trigger: CAGATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 2 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR TCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTCTCTCTGATTTGGTTTaGCTGGCTGACATAAGCAGA +
Preference number: 2 (lower is better)
Translates to: PATAATMMTPVKHGEVLPLSDLV*LADISR
Trigger: TCTGCTTATGTCAGCCAGTCAAACCAAATCAGAGAG...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGAACCCAAAGATGGAGGTaGGGTGAGGGATTTCCTAGG +
Preference number: 2 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRTQRWR*GEGFPR
Trigger: CCTAGGAAATCCCTCACCTCACCTCCATCTTTGGGT...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR TCA 90 bp ACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACGAGTTCTTTGGCCCCTaGGGAGAGGTTCATTCTGGA +
Preference number: 2 (lower is better)
Translates to: TGTPPKGNGKQRFTIFPNEFFGP*GEVHSG
Trigger: TCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTC...GTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 2 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTCCAGGACTTCTTGTaGTTGGGAGAAGAGACACCT +
Preference number: 2 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSLQDFL*LGEETP
Trigger: AGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 2 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp CTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGGAAGGCAAAGACGCATaGAGTCCATGTTCACCTGCT +
Preference number: 2 (lower is better)
Translates to: LLPKATGSKGSPFSQTGTEGKDA*SPCSPA
Trigger: AGCAGGTGAACATGGACTGCATGCGTCTTTGCCTTC...CGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR CCA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGC +
Preference number: 2 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFAFRST*SIRRPR
Trigger: GCGGGGTCGACGGATAGACCACGTACTCCTAAATGC...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGTTGCTGAAGAACAACTaGAAAACCTCGAATGCCATC +
Preference number: 2 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGLLKNN*KTSNAI
Trigger: GATGGCATTCGAGGTTTTCCAGTTGTTCTTCAGCAA...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGCACCAGGGAAGACAGTaGAGGAGTCCTGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQHQGRQ*RSPGLW
Trigger: CCAGAGCCCAGGACTCCTCCACTGTCTTCCCTGGTG...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERCDTS*EELCCS
Trigger: GCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 90 bp CATGTGGTTATTTCCAAACAGGGTTGGCAGAGGCAAAGTGGTGATTaGAGAGGTCCCAGCACTTTCGCACCGATGCAAGAACCTGGTCAC +
Preference number: 2 (lower is better)
Translates to: HVVISKQGWQRQSGD*RGPSTFAPMQEPGH
Trigger: GTGACCAGGTTCTTGCATCGGTGCGAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAATAACCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCCCCAAAGCCATCTCTaGATTTTGGAATGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSPQSHL*ILEWEG
Trigger: TCCTTCCCATTCCAAAATTCAGAGATGGCTTTGGGG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: EGIDGILHGTEALVECQVLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 2 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFRHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 2 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR GCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACTATCCGATTCTGCTaGATGTTTTGGCAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLTIRFC*MFWQKE
Trigger: TTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGT...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR-3UTR GCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTCCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 2 (lower is better)
Translates to: GSSPQCHHPQHSPQASEAPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 2 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 2 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGNFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAGGACTTCTTGTGCTTaGGAGAAGAGACACCTGGAA +
Preference number: 2 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLRTSCA*EKRHLE
Trigger: TTCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 2 (lower is better)
Translates to: RWLLVTTLCLHWASETTLCLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYSSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCTTGCTGGGGGTCCTTaGCTGGCACTTTCTGTAAGA +
Preference number: 2 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYLAGGP*LALSVR
Trigger: TCTTACAGAAAGTGCCAGCCAAGGACCCCCAGCAAG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCCCAAAGCCATCTCTaGATTTTGGAATGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPQSHL*ILEWEG
Trigger: TCCTTCCCATTCCAAAATTCAGAGATGGCTTTGGGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCAGATGCCTGCACCTaGAAACCCTTCTATTCAGAC +
Preference number: 2 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSDACT*KPFYSD
Trigger: GTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCCACCAACCAGATGTaGCCTATTCATTATTCCCTC +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESTNQM*PIHYSL
Trigger: GAGGGAATAATGAATAGGTCACATCTGGTTGGTGGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACATTTTGGCAGAAGGAATaGAACATGCCTTTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTFWQKE*NMPLLV
Trigger: CACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAA...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 2 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAATGACCCCACATGTCTaGATATCCATCCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTMTPHV*ISILWS
Trigger: GGACCACAGGATGGATATGCAGACATGTGGGGTCAT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 2 (lower is better)
Translates to: EGIDGILHGTEALVECQVTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: RWLLVTTLCLHWASETTLWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAAGGACTTCTTGTGCTTaGGAGAAGAGACACCTGGAA +
Preference number: 2 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGRTSCA*EKRHLE
Trigger: TTCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTTCAACCCCTCAACATaGGTATCTGTTTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEFNPST*VSVLVV
Trigger: CACCACCAAAACAGATACCCATGTTGAGGGGTTGAA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 2 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLTLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGCCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 2 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CCA 90 bp CACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGATTGGGGATAAAGACTTaGGAAGGCAAAGACGCATGC +
Preference number: 2 (lower is better)
Translates to: HSSQRQREAKVHHFPKQGLGIKT*EGKDAC
Trigger: GCATGCGTCTTTGCCTTCCCAAGTCTTTATCCCCAA...TCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CAA 90 bp AGATTCAAGAGCAGCCTAGGACATGTTTGTCTTGGGGATAAAGACTaGGGAAGGCAAAGACGCATGCAGTCCATGTTCACCTGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: RFKSSLGHVCLGDKD*GRQRRMQSMFTCSS
Trigger: TGAGGAGCAGGTGAACATGGACTGCATGCGTCTTTGCCTTCCCAAGTCTTTATCCCCAAGACAAACATGTCCTAGGCTGCTCTTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR TCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTTAGCCTCACAGACCTaGTCATTTATACACATACCC +
Preference number: 2 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLASQT*SFIHIP
Trigger: GGGTATGTGTATAAATGATCAGGTCTGTGAGGCTAA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYRTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR GCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 2 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGGGAGAAGAGACACCTaGAAAACAGGTTTATTCCAC +
Preference number: 2 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLGRRDT*KTGLFH
Trigger: GTGGAATAAACCTGTTTTCCAGGTGTCTCTTCTCCC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGGTATCTGTTTTGGTaGTGTTTTTCTGTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGYLFW*CFSVGD
Trigger: GTCTCCAACAGAAAAACACCACCAAAACAGATACCC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 2 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTCAGATGCCTGCACCTaGAAACCCTTCTATTCAGAC +
Preference number: 2 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDSDACT*KPFYSD
Trigger: GTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCT +
Preference number: 2 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSRDFLP*PPHDQA
Trigger: AGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCT...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR TCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGTCTCCACCGTGTAAATaGTACAACAGATCTCTCTTT +
Preference number: 2 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWSPPCK*YNRSLF
Trigger: AAAGAGAGATCTGTTGTATCATTTACACGGTGGAGA...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 2 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 2 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLSFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp AGTCAGGAATACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTTGAGAAGACCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: SQEYCTDTVDTWPGKLRRPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...TCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 2 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLNFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAGGACTTCTTGTGCTTaGGAGAAGAGACACCTGGAA +
Preference number: 2 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDRTSCA*EKRHLE
Trigger: TTCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGACATTTCCTGGGAGATaGATACGTTCTATGACTCAA +
Preference number: 2 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLETFPGR*IRSMTQ
Trigger: TTGAGTCATAGAACGTATCCATCTCCCAGGAAATGT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp CAGGGACGAGTTCTTTGGCCCCTGAGGAGAGGTTCATTCTGGAGACCGAGACATGACATCAGTATAAAATaGAGATTCAAGAGCAGCCTA +
Preference number: 2 (lower is better)
Translates to: QGRVLWPLRRGSFWRPRHDISIK*RFKSSL
Trigger: TAGGCTGCTCTTGAATCTCCATTTTATACTGATGTC...ATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR CCA 90 bp TTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTAGGAGAGGTTCATTCTaGAGACCGAGACATTGTTGG +
Preference number: 2 (lower is better)
Translates to: FILTGTPPKGNGKQRFTIRRGSF*RPRHCW
Trigger: CCAACAATGTCTCGGTCTCCAGAATGAACCTCTCCT...AATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 2 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCCCCAAAGCCATCTCTaGATTTTGGAATGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTPQSHL*ILEWEG
Trigger: TCCTTCCCATTCCAAAATTCAGAGATGGCTTTGGGG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTCAGATGCCTGCACCTaGAAACCCTTCTATTCAGAC +
Preference number: 2 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSDACT*KPFYSD
Trigger: GTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCATGGGACCAATAGGCTaGGCTCTGGCCAGTGAGAGG +
Preference number: 2 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLMGPIG*ALASER
Trigger: CCTCTCACTGGCCAGAGCTCAGCCTATTGGTCCCAT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAATCCACAGGGTTTCTaGGCACCAGAGACACTGACT +
Preference number: 2 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFNPQGF*APETLT
Trigger: AGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTAATCCACAGGGTTTCTaGGCACCAGAGACACTGACT +
Preference number: 2 (lower is better)
Translates to: NMGICFGGVFLLETTAWCNPQGF*APETLT
Trigger: AGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 2 (lower is better)
Translates to: WMVSLSFPLARVSLTDLISFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 2 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCTCCAGGACTTCTTGTaGTTGGGAGAAGAGACACCT +
Preference number: 2 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLQDFL*LGEETP
Trigger: AGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTCCAGGACTTCTTGTaGTTGGGAGAAGAGACACCT +
Preference number: 2 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLQDFL*LGEETP
Trigger: AGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTATGACCCCACATGTCTaGATATCCATCCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: NMGICFGGVFLLETTAWCMTPHV*ISILWS
Trigger: GGACCACAGGATGGATATGCAGACATGTGGGGTCAT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTTATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 2 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCCCTGTATCCCTGTTTaGATGGTTAGCCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDPCIPV*MVSLSF
Trigger: GAAAGAAAGGCTAACCATCCAAACAGGGATACAGGG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTGTCACATCTTGCGTaGGAAGACAAGACAGTGCAT +
Preference number: 2 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLSHLA*EDKTVH
Trigger: ATGCACTGTCTTGTCTTCCCACGCAAGATGTGACAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AGTCAGGAATACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTTGAGAAGAAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: SQEYCTDTVDTWPGKLRRRWHTS*HRSPGR
Trigger: TCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT...TCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCCCCAAAGCCATCTCTaGATTTTGGAATGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: NMGICFGGVFLLETTAWCPQSHL*ILEWEG
Trigger: TCCTTCCCATTCCAAAATTCAGAGATGGCTTTGGGG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAGATGCCTGCACCTaGAAACCCTTCTATTCAGAC +
Preference number: 2 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSDACT*KPFYSD
Trigger: GTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCCAAAGCCAACCCTTaGCTCCCTTTTCTAAGACAG +
Preference number: 2 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSKANP*LPFLRQ
Trigger: CTGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 2 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 2 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCTCCAGGACTTCTTGTaGTTGGGAGAAGAGACACCT +
Preference number: 2 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVLQDFL*LGEETP
Trigger: AGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCCCTGTATCCCTGTTTaGATGGTTAGCCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTPCIPV*MVSLSF
Trigger: GAAAGAAAGGCTAACCATCCAAACAGGGATACAGGG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 2 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTTGGTCCTTCATAAACTaGTGCAGCTCATACAGAATG +
Preference number: 2 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSWSFIN*CSSYRM
Trigger: CATTCTGTATGAGCTGCAGCAGTTTATGAAGGACCA...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTTGTCACATCTTGCGTaGGAAGACAAGACAGTGCAT +
Preference number: 2 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLSHLA*EDKTVH
Trigger: ATGCACTGTCTTGTCTTCCCACGCAAGATGTGACAA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 2 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 2 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTTAGCCTCACAGACCTaGTCATTTATACACATACCC +
Preference number: 2 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLASQT*SFIHIP
Trigger: GGGTATGTGTATAAATGATCAGGTCTGTGAGGCTAA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGACTTTTCACACTCACTaGATAACAGTTGTGCAGAGT +
Preference number: 2 (lower is better)
Translates to: LTLSISFQRHALNHYPILTFHTH*ITVVQS
Trigger: ACTCTGCACAACTGTTATTCAGTGAGTGTGAAAAGT...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGGAGAAGAGACACCTaGAAAACAGGTTTATTCCAC +
Preference number: 2 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGRRDT*KTGLFH
Trigger: GTGGAATAAACCTGTTTTCCAGGTGTCTCTTCTCCC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCCCTGTATCCCTGTTTaGATGGTTAGCCTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVPCIPV*MVSLSF
Trigger: GAAAGAAAGGCTAACCATCCAAACAGGGATACAGGG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCCAAAGCCAACCCTTaGCTCCCTTTTCTAAGACAG +
Preference number: 2 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSKANP*LPFLRQ
Trigger: CTGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCCCAAATTAAGGGCTaGAAGATTTGTGACCCATTA +
Preference number: 2 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSQIKG*KICDPL
Trigger: TAATGGGTCACAAATCTTGCAGCCCTTAATTTGGGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CAA 90 bp GAGCATATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATaGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAA +
Preference number: 2 (lower is better)
Translates to: EHILLSSSIWGSTIG*APWLLPGPCSNNSE
Trigger: TTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAATATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 2 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 2 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVNFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGGGAGAAGAGACACCTaGAAAACAGGTTTATTCCAC +
Preference number: 2 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLGRRDT*KTGLFH
Trigger: GTGGAATAAACCTGTTTTCCAGGTGTCTCTTCTCCC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCAAAACTTCTCATCTaGCAGATGTCCATGAGTTGT +
Preference number: 2 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPKLLI*QMSMSC
Trigger: ACAACTCATGGACATCTGTCAGATGAGAAGTTTTGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 2 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNNFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CCA 72 bp CCCACTGCCCAAGGTCACTTCCTGGAGCCTGGGCCATaGGCACCCCGGGGGTGGCTTGTCAGAAGCCACTGG +
Preference number: 3 (lower is better)
Translates to: PTAQGHFLEPGP*APRGWLVRSHW
Trigger: CCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGGCAGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp GGGTGGGCCTCTGCCTCTGGAGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGTGGAGGAGTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: GWASASGAFWAA*STREDSGGVLG
Trigger: GCCCAGGACTCCTCCACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp TTGCCCAGCTCTCAGGCCACGTGTTCCTGGCCCCACTaGCCAAGGTCACTTCCTGGAGCCTGGGCCATGGGC +
Preference number: 3 (lower is better)
Translates to: LPSSQATCSWPH*PRSLPGAWAMG
Trigger: GCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTGAGAGCTGGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGGGAGTGATGAGTCCCTaGGGGAGGAGTAGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPGVMSP*GRSRAF
Trigger: GAAAGCCCTACTCCTCCCCAAGGGACTCATCACTCC...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp TCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTaGTGCACCTGCTGGACAAGGGCTGTGGCCCGTGAG +
Preference number: 3 (lower is better)
Translates to: SCTTASPLLLAA*CTCWTRAVARE
Trigger: CTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp CCTGGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCTGGTATCTTCGGGAAG +
Preference number: 3 (lower is better)
Translates to: PGSFLSDDPGGD*GDVWQAGIFGK
Trigger: CTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 72 bp CACTTCCTGGAGCCTGGGCCATGGGCACCCCGGGGGTaGCTTGTCAGAAGCCACTGGGCACAGATGTCTTGC +
Preference number: 3 (lower is better)
Translates to: HFLEPGPWAPRG*LVRSHWAQMSC
Trigger: GCAAGACATCTGTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 3 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR TCA 72 bp CTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTaGCGTGTGGCAGGCTGGTATCTTCGGGAAGGTTGC +
Preference number: 3 (lower is better)
Translates to: LLLVRRPRRRLG*RVAGWYLREGC
Trigger: GCAACCTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR GCA 72 bp CACAGGGTGGGCCTCTGCCTCTGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGACAGTGGAGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: HRVGLCLWSFLG*LLHQGRQWRSP
Trigger: AGGACTCCTCCACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCACCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp TTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGGAAGGTTGCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: LSDDPGGDWGDV*QAGIFGKVAPL
Trigger: CAGAGGAGCAACCTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 3 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGLPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 3 (lower is better)
Translates to: KFPRRMQDASSDSGGENILPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGGTGTGTTCATGTGCCTaGACACATCAGCTGCAGTCA +
Preference number: 3 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPVCSCA*THQLQS
Trigger: TGACTGCAGCTGATGTGTCAAGGCACATGAACACAC...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp CCACTGGAGGAAAGAGGTGGAGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGGCCACGTGTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PLEERGGGHRHH*CCPALRPRVPG
Trigger: GCCAGGAACACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCCTCCACCTCTTTCCTCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR GCA 72 bp AGGTTCCCGGCTTTGAGGCAGGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCAAGCCCAGTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: RFPALRQAMPQA*HAPVVSSPVFV
Trigger: CACAAAGACTGGGCTTGATACCACCGGGGCGTGGCATGCTTGGGGCATGGCCTGCCTCAAAGCCGGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp ACTGGGCACAGATGTCTTGCACTACTGCATCCCCGCTaGTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGG +
Preference number: 3 (lower is better)
Translates to: TGHRCLALLHPR*SWRPAAPAGQG
Trigger: CCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp GGGTGGCTTGTCAGAAGCCACTGGGCACAGATGTCTTaGACTACTGCATCCCCGCTGCTCTTGGCGGCCTGC +
Preference number: 3 (lower is better)
Translates to: GWLVRSHWAQMS*TTASPLLLAAC
Trigger: GCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp CACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTaGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: HRCLALLHPRCS*RPAAPAGQGLW
Trigger: CCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp CTGCTCTGCTGTATGCACCACTCCAGGACCTCCAGGTaGGCCCACAACCCATCACAGGCATCCCTGAGGAGC +
Preference number: 3 (lower is better)
Translates to: LLCCMHHSRTSR*AHNPSQASLRS
Trigger: GCTCCTCAGGGATGCCTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR GCA 72 bp CAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGCTGCTACCCGCATCTG +
Preference number: 3 (lower is better)
Translates to: QRCQWPVELSGH*QFSEWCCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR GCA 72 bp TGTCAGAAGCCACTGGGCACAGATGTCTTGCACTACTaGATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTG +
Preference number: 3 (lower is better)
Translates to: CQKPLGTDVLHY*IPAALGGLLHL
Trigger: CAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAGTGGCTTCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 3 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDSPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 3 (lower is better)
Translates to: AQMSCTTASPLLLAACCTLIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAG +
Preference number: 3 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHSERLS*QSWHWE
Trigger: CTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGA...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR TCA 72 bp GAGCTCGGTGTAGAAAGTGGGAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCCAGAGTACCCAGACGA +
Preference number: 3 (lower is better)
Translates to: ELGVESGRSSRQ*EACSWARVPRR
Trigger: TCGTCTGGGTACTCTGGCCCAGCTACACGCCTCTCACTGCCTGGATGACCTCCCACTTTCTACACCGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp CCCTTGGAGAGCCTGCAGCAGTGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCCCGGTGCAGATTCAGG +
Preference number: 3 (lower is better)
Translates to: PLESLQQCSISW*PQAMLSRCRFR
Trigger: CCTGAATCTGCACCGGGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCACTGCTGCAGGCTCTCCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp ATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCTGGGGGCACAAATTCC +
Preference number: 3 (lower is better)
Translates to: MQILSVSSGTHW*LAGGVAGGTNS
Trigger: GGAATTTGTGCCCCCAGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GTGACTGAAGGACCTGATCTAGCTGCTGGGAGAGGGTaGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGG +
Preference number: 3 (lower is better)
Translates to: VTEGPDLAAGRG*CGWQHSPRLGW
Trigger: CCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCAGCTAGATCAGGTCCTTCAGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GGGGGTGTCGCTGGGGGCACAAATTCCTGTGAGGGCTaGGTTGGTGGGAAACTCCTTTCCCTTAGACTAGGG +
Preference number: 3 (lower is better)
Translates to: GGVAGGTNSCEG*VGGKLLSLRLG
Trigger: CCCTAGTCTAAGGGAAAGGAGTTTCCCACCAACCCAGCCCTCACAGGAATTTGTGCCCCCAGCGACACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp ACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTCGCTGGGGGCACAAAT +
Preference number: 3 (lower is better)
Translates to: TMQILSVSSGTH*CLAGGVAGGTN
Trigger: ATTTGTGCCCCCAGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp TCTCCACCAACTGGCGGGCAGCTCTGCAGTAGGTCATaGCAGCATCCAGCTGGAAGTCCTGCAGAACACGGA +
Preference number: 3 (lower is better)
Translates to: SPPTGGQLCSRS*QHPAGSPAEHG
Trigger: TCCGTGTTCTGCAGGACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGTTGGTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp AGGGTCTGGAGCAGCCTCTTGGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGGAGTACAAGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: RVWSSLLADSRL*QCVQPRSTSRQ
Trigger: TTGCCTGCTTGTACTCCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 3 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTCCACCTCATCTGCTTaGGGGACTCTCACCACAAAC +
Preference number: 3 (lower is better)
Translates to: AQMSCTTASPLLLAACCTSTSSA*GTLTTN
Trigger: GTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGGA...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTAACTGCATCAGGCTCTaGCTGGGGGTCCTTGGCTGG +
Preference number: 3 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFNCIRL*LGVLGW
Trigger: CCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGTT...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 3 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLSPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 3 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTC +
Preference number: 3 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFQWPVE*SGHCQF
Trigger: GAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTG...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTCTGGAGGACTCTCCTaGTTGAGAAGGTGCAGAAGA +
Preference number: 3 (lower is better)
Translates to: AQMSCTTASPLLLAACCTSGGLS*LRRCRR
Trigger: TCTTCTGCACCTTCTCAACAAGGAGAGTCCTCCAGA...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp CGCTTAGGCTGGGCCAGCACATCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGCCTCCTCCCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: RLGWASTSEAVQ*CCTVEGLLPFL
Trigger: AAGAAAAGGGAGGAGGCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAGCCTAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp GGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTaGGTGTTCTTGCTTCACAGCAATCAAGTAGGCAGA +
Preference number: 3 (lower is better)
Translates to: GLLHLLDKGCGP*VFLLHSNQVGR
Trigger: TCTGCCTACTTGATTGCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp TGGGGAGGAGAGAGAGTCATTCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAGGCTGTCTTTGCAGTC +
Preference number: 3 (lower is better)
Translates to: WGGERVIRWLCS*GQVLREAVFAV
Trigger: GACTGCAAAGACAGCCTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCGAATGACTCTCTCTCCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR GCA 72 bp CTCCACTGGGCCTCAGAGACAACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: LHWASETTLESR*RRLCSPSLLPE
Trigger: CTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 72 bp CCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGCTCTGCAGTCCATCTC +
Preference number: 3 (lower is better)
Translates to: PPCVSTGPQRQP*KVDAGGSAVHL
Trigger: GAGATGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 72 bp TCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTaGCCCGTGAGTGTTCTTGCTTCACAGCAATCAAGT +
Preference number: 3 (lower is better)
Translates to: SWRPAAPAGQGL*PVSVLASQQSS
Trigger: ACTTGATTGCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GAGGCCAGGTCCTCAGAGAGGCTGTCTTTGCAGTCCTaGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGG +
Preference number: 3 (lower is better)
Translates to: EARSSERLSLQS*HWECWCEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGAGGACCTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSVLVEG*LCHFKA
Trigger: TGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCAC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGACTGCACAGATACTGTaGACACCTGGCCAGGTAAGT +
Preference number: 3 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQTAQIL*TPGQVS
Trigger: ACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGT...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR CCA 72 bp AGTAAAACACCATTCCTGCTGCTGCAGCGCTGCCAATaGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: SKTPFLLLQRCQ*PVELSGHCQFS
Trigger: GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 72 bp GGTCGAGGGATTGCTCTGTCACTTCAAGGCACATGGTaGGGTCAGGGATTCTTCGCAGGAGTTGCAGAGCCT +
Preference number: 3 (lower is better)
Translates to: GRGIALSLQGTW*GQGFFAGVAEP
Trigger: AGGCTCTGCAACTCCTGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGACAGAGCAATCCCTCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GCTGGTCGAGGGATTGCTCTGTCACTTCAAGGCACATaGTGGGGTCAGGGATTCTTCGCAGGAGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: AGRGIALSLQGT*WGQGFFAGVAE
Trigger: CTCTGCAACTCCTGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCAASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGCCTCCCAGCATGACCTaGCAGGCAACATCCATTTTC +
Preference number: 3 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMPPSMT*QATSIF
Trigger: GAAAATGGATGTTGCCTGCAAGGTCATGCTGGGAGG...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp AGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGCTATGTGCTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: SKGLWDSQGTPF*LPFRMCYVLRA
Trigger: AGCCCTCAGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR GCA 72 bp TGCAGCAGTGCTCAATCAGCTGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCAGGATGGCAATGCACA +
Preference number: 3 (lower is better)
Translates to: CSSAQSAGDHRQ*CPGADSGWQCT
Trigger: TGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCACTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp TGTACTTCTCTTTCTCCACCAACTGGCGGGCAGCTCTaGAGTAGGTCATGGCAGCATCCAGCTGGAAGTCCT +
Preference number: 3 (lower is better)
Translates to: CTSLSPPTGGQL*SRSWQHPAGSP
Trigger: AGGACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGTTGGTGGAGAAAGAGAAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCCTTTCTTTCCCTCTaGCCCGTGTTAGCCTCACAG +
Preference number: 3 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSAFLSL*PVLASQ
Trigger: CTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 3 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 3 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCALIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDTDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGTCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 3 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMSSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 3 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 3 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGCTCAGAGCTCAAACTTaGAAGGAGAACTGCAGCAAG +
Preference number: 3 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGLRAQT*KENCSK
Trigger: CTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGAG...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGTATTGCCAACCTTCTTaGTCTGCTCTGCAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMYCQPS*SALQPE
Trigger: CTCTGGCTGCAGAGCAGACAAAGAAGGTTGGCAATA...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp AGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: RWHTSWHRSPGRVSGSDTVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...AGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR TCA 72 bp GCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: AQLTTCTFQGWV*TSVSAICLAPS
Trigger: AGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR TCA 72 bp GGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAACTGGGTGAGGACTTCA +
Preference number: 3 (lower is better)
Translates to: GPVLGSLPGSAP*TSVPLNWVRTS
Trigger: TGAAGTCCTCACCCAGTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR TCA 72 bp GTCGGACAGCAGTCAGTTGTCCATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGTGAGAAGTGGCCAAGC +
Preference number: 3 (lower is better)
Translates to: VGQQSVVHRSGW*GSWPRSEKWPS
Trigger: GCTTGGCCACTTCTCACTTCTTGGCCAACTACCTCACCACCCACTTCTATGGACAACTGACTGCTGTCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp GAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGCCTaGCTCACTGACACATTTGAGCAGTTGCTGGATCTC +
Preference number: 3 (lower is better)
Translates to: EDGVPVTFGCHA*LTDTFEQLLDL
Trigger: GAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACACCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp ATTTTCCCTTCAGGAATCACTGCCAGAGAAAGGCTCTaGGTCCGAAGGGTAGCTTCCAGTTCCCTCAGGGTG +
Preference number: 3 (lower is better)
Translates to: IFPSGITARERL*VRRVASSSLRV
Trigger: CACCCTGAGGGAACTGGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GGAGGGCTGCGGCTACTGATCTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCCCCTATTGCAAATTCA +
Preference number: 3 (lower is better)
Translates to: GGLRLLISSSCS*RSLRKAPIANS
Trigger: TGAATTTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 72 bp GAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGG +
Preference number: 3 (lower is better)
Translates to: ERWLLVTTLCLH*ASETTLESRCR
Trigger: CCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 3 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCAGGACTTCTTGTGCTaGGGAGAAGAGACACCTGGA +
Preference number: 3 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEQDFLC*GEETPG
Trigger: TCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp GGGAAGATTTTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGACAGGGACGAGTTCTTaGGCCCCTGAGGAGAGGTTC +
Preference number: 3 (lower is better)
Translates to: GKIFILTGTPPKGNGKQRTGTSS*APEERF
Trigger: GAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTGT...CCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAAAATCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR GCA 72 bp CACACTTTAGTCCTTCTTGGACAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCAGGCATGACTCCAGGG +
Preference number: 3 (lower is better)
Translates to: HTLVLLGQPCLK*SRPESPGMTPG
Trigger: CCCTGGAGTCATGCCTGGAGATTCTGGCCTACTGCATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp ACAGTGGCCCAATCCACCTTCATGTTCATAAGCAGCTaGTCCAGCATGAACAGGGGGTTAGAGGACAAGTGG +
Preference number: 3 (lower is better)
Translates to: TVAQSTFMFISS*SSMNRGLEDKW
Trigger: CCACTTGTCCTCTAACCCCCTGTTCATGCTGGAGCAGCTGCTTATGAACATGAAGGTGGATTGGGCCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp TGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATaGACCAGCAGCTGGGTCAGAAGCTGGACACCATCC +
Preference number: 3 (lower is better)
Translates to: WLLPGPCSNNSE*TSSWVRSWTPS
Trigger: GGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR CCA 72 bp ACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTaGGGGAGACTGCAAACCCAGAATCTTCTGATACAC +
Preference number: 3 (lower is better)
Translates to: TTAPQGLPVTPH*GRLQTQNLLIH
Trigger: GTGTATCAGAAGATTCTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GAGAGGTCCCAGCACTTTCGCACCGATGCAAGAACCTaGTCACTTCCATCTGCAGCTGAAGTGTGTTCATGT +
Preference number: 3 (lower is better)
Translates to: ERSQHFRTDART*SLPSAAEVCSC
Trigger: ACATGAACACACTTCAGCTGCAGATGGAAGTGACCAGGTTCTTGCATCGGTGCGAAAGTGCTGGGACCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTTTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 3 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 3 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: GSSPQCHHPQHSPQASEATDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTTCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 3 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCASSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACACTTTCTGTAAGAGCTaGAGAACATCTTCCTCCCTG +
Preference number: 3 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDTFCKS*RTSSSL
Trigger: CAGGGAGGAAGATGTTCTCAAGCTCTTACAGAAAGT...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 3 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 3 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGGACTTCTTGTGCTaGGGAGAAGAGACACCTGGA +
Preference number: 3 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLQDFLC*GEETPG
Trigger: TCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAAGACTCCAGGACTTCTaGTGCTTGGGAGAAGAGACA +
Preference number: 3 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGRLQDF*CLGEET
Trigger: TGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAGTCT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCAGACTCCAGGACTTCTaGTGCTTGGGAGAAGAGACA +
Preference number: 3 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIRLQDF*CLGEET
Trigger: TGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAGTCT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCGTCCCCTGTTTTGACTaGACTCTGCTAGAGATGGCC +
Preference number: 3 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIVPCFD*TLLEMA
Trigger: GGCCATCTCTAGCAGAGTCAAGTCAAAACAGGGGAC...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR-3UTR CAA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGCTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQLPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGGAGACTCTTACTGATTaGCTGAAGAACAACTGGAAA +
Preference number: 3 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGETLTD*LKNNWK
Trigger: TTTCCAGTTGTTCTTCAGCAAATCAGTAAGAGTCTC...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp AGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCCTAGGGCTCTCTGAGAGAAAGCTGAGATACGGGTaGTATGGAACTATTGTGGGG +
Preference number: 3 (lower is better)
Translates to: SPPKDGGEVRDFLGLSERKLRYG*YGTIVG
Trigger: CCCCACAATAGTTCCATACAACCCGTATCTCAGCTT...TCTCTCAGAGAGCCCTAGGAAATCCCTCACCTCACCTCCATCTTTGGGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR CAA 90 bp CCTGGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGGGCATAGATGGCATACTACAACAGATCTCTCTTaGGTATGGGGTTGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: PGTGSAGVSLHRGHRWHTTTDLS*VWGCCS
Trigger: AGAGCAGCAACCCCATACCAAAGAGAGATCTGTTGT...AGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR TCA 72 bp AAAGTCCAGGGCTTTCTCTGCGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGTGAAGCCAATCTCCTG +
Preference number: 3 (lower is better)
Translates to: KVQGFLCVSGKQ*VHLVHSEANLL
Trigger: CAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAGCCCTGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp CACCGATGCAAGAACCTGGTCACTTCCATCTGCAGCTaGAGTGTGTTCATGTGCCTTGACACATCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: HRCKNLVTSICS*SVFMCLDTSAA
Trigger: TGCAGCTGATGTGTCAAGGCACATGAACACACTTCAGCTGCAGATGGAAGTGACCAGGTTCTTGCATCGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp TTTCCAAACAGGGTTGGCAGAGGCAAAGTGGTGATTTaGGAGGTCCCAGCACTTTCGCACCGATGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: FPNRVGRGKVVI*EVPALSHRCKN
Trigger: GTTCTTGCATCGGTGCGAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp GGTTATTTCCAAACAGGGTTGGCAGAGGCAAAGTGGTaGTTTGAGAGGTCCCAGCACTTTCGCACCGATGCA +
Preference number: 3 (lower is better)
Translates to: GYFQTGLAEAKW*FERSQHFRTDA
Trigger: TGCATCGGTGCGAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAATAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR TCA 72 bp GCTGTCTTTGCAGTCCTGGCACTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATAGATGGCATACTTCAT +
Preference number: 3 (lower is better)
Translates to: AVFAVLALGVLV*VYTEGIDGILH
Trigger: ATGAAGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGACTGCAAAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR GCA 72 bp AGAGAAACATGGCACTTGCGTGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGGTCCAATCCAACTCTT +
Preference number: 3 (lower is better)
Translates to: RETWHLRERSYP*PGRQVGSNPTL
Trigger: AAGAGTTGGATTGGACCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR GCA 72 bp GTGCCTATGAGGCCCTGGGTAACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCATTGTATAAGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: VPMRPWVTVFWL*LHMAWHCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 72 bp GGAAAACCTCGAATGCCATCAGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGCCTTTCAAGGCTACTA +
Preference number: 3 (lower is better)
Translates to: GKPRMPSAFRST*SIRRPRLSRLL
Trigger: TAGTAGCCTTGAAAGGCGGGGTCGACGGATAGACCACGTACTCCTAAATGCTGATGGCATTCGAGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GGTAGTACTCGGCTTCCAAAAGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCAAGATCTGATCCAAAG +
Preference number: 3 (lower is better)
Translates to: GSTRLPKAGSLA*LLQLAARSDPK
Trigger: CTTTGGATCAGATCTTGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGAGTACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp AATCGTCATCTTGCAAGGATACAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCACATCCTGCACCAGCC +
Preference number: 3 (lower is better)
Translates to: NRHLARIQRASL*TLGTQPHPAPA
Trigger: GGCTGGTGCAGGATGTGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTGTATCCTTGCAAGATGACGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 3 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCAGGACTTCTTGTGCTaGGGAGAAGAGACACCTGGA +
Preference number: 3 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDQDFLC*GEETPG
Trigger: TCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGACTCCAGGACTTCTaGTGCTTGGGAGAAGAGACA +
Preference number: 3 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTRLQDF*CLGEET
Trigger: TGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAGTCT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCTCACCCACCAACTTaGCAGCAGGGACATTCACAA +
Preference number: 3 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSHPPT*QQGHSQ
Trigger: TTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAAACATTGTCACATCTaGCGTGGGAAGACAAGACAG +
Preference number: 3 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEKHCHI*RGKTRQ
Trigger: CTGTCTTGTCTTCCCACGCAAGATGTGACAATGTTT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp TCTAAGACAGAGAAAAGAAGCGCACTCCCTTCCCAATaGCCCCACATGTCTGCATATCCATCCTGTGGTCCT +
Preference number: 3 (lower is better)
Translates to: SKTEKRSALPSQ*PHMSAYPSCGP
Trigger: AGGACCACAGGATGGATATGCAGACATGTGGGGTCATTGGGAAGGGAGTGCGCTTCTTTTCTCTGTCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp ACCATTTTCCCAAACAGGGACGAGTTCTTTGGCCCCTaGGGAGAGGTTCATTCTGGAGACCGAGACATTGTT +
Preference number: 3 (lower is better)
Translates to: TIFPNRDEFFGP*GEVHSGDRDIV
Trigger: AACAATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTGTTTGGGAAAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR GCA 72 bp GTAGGTGTTGTTCATGATTTTCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGTCCGAAGGGTAGCTTC +
Preference number: 3 (lower is better)
Translates to: VGVVHDFPFRNH*QRKALRPKGSF
Trigger: GAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGGAAAATCATGAACAACACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp GCTGCCATGCCTGACTCACTGACACATTTGAGCAGTTaGTGGATCTCACTGTACTTCTCTTTCTCCACCAAC +
Preference number: 3 (lower is better)
Translates to: AAMPDSLTHLSS*WISLYFSFSTN
Trigger: GTTGGTGGAGAAAGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCATGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp TTGGGAAGGCAAAGACGCATGCAGTCCATGTTCACCTaGTCCTCATCTATTCCCTCCTTTCTACACCCCTAT +
Preference number: 3 (lower is better)
Translates to: LGRQRRMQSMFT*SSSIPSFLHPY
Trigger: ATAGGGGTGTAGAAAGGAGGGAATAGATGAGGAGCAGGTGAACATGGACTGCATGCGTCTTTGCCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR GCA 72 bp GTCTTGGGGATAAAGACTTGGGAAGGCAAAGACGCATaGAGTCCATGTTCACCTGCTCCTCATCTATTCCCT +
Preference number: 3 (lower is better)
Translates to: VLGIKTWEGKDA*SPCSPAPHLFP
Trigger: AGGGAATAGATGAGGAGCAGGTGAACATGGACTGCATGCGTCTTTGCCTTCCCAAGTCTTTATCCCCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CCA 72 bp TGGGTAACTGTCTTTTGGCTCTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGTCTTTGGGACTCCCAG +
Preference number: 3 (lower is better)
Translates to: WVTVFWLCLHMA*HCISKGLWDSQ
Trigger: CTGGGAGTCCCAAAGACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGTTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CCA 72 bp GTGAGTTTACACAGAGGGCATAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGAC +
Preference number: 3 (lower is better)
Translates to: VSLHRGHRWHTS*HRSPGRVSGSD
Trigger: GTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTGTAAACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 3 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 3 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTRETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 3 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 3 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 3 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAGACTCCAGGACTTCTaGTGCTTGGGAGAAGAGACA +
Preference number: 3 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDRLQDF*CLGEET
Trigger: TGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAGTCT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCCTTTCTTTCCCTCTaGCCCGTGTTAGCCTCACAG +
Preference number: 3 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQAFLSL*PVLASQ
Trigger: CTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGCTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLLPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AGTCAGGAATACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTTGAGAAGACTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 3 (lower is better)
Translates to: SQEYCTDTVDTWPGKLRRLNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...TCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp TTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGGTTGTATGGAACTATaGTGGGGAGCAAGGGATAAA +
Preference number: 3 (lower is better)
Translates to: LLWEPQSISPPKDGGEVRGCMEL*WGARDK
Trigger: TTTATCCCTTGCTCCCCACAATAGTTCCATACAACC...CCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR TCA 72 bp AGCTTCTCTCCCAGTTCTGTATATGACTTTGCTTTGTaGCTGAAGAACCGAATACAGGTCATGGCGGCCCGA +
Preference number: 3 (lower is better)
Translates to: SFSPSSVYDFAL*LKNRIQVMAAR
Trigger: TCGGGCCGCCATGACCTGTATTCGGTTCTTCAGTCACAAAGCAAAGTCATATACAGAACTGGGAGAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp GCAAGCAGACGCCAGAGAAGGACATTTCCTGGGAGATaGATACGTTCTATGACTCAAGGAAGGAAAAGCCAA +
Preference number: 3 (lower is better)
Translates to: ASRRQRRTFPGR*IRSMTQGRKSQ
Trigger: TTGGCTTTTCCTTCCTTGAGTCATAGAACGTATCCATCTCCCAGGAAATGTCCTTCTCTGGCGTCTGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CCA 72 bp CTGAGGAGAGGTTCATTCTGGAGACCGAGACATTGTTaGACATTGTTGGTCAAAGTGTGGGGTGGGGATTTT +
Preference number: 3 (lower is better)
Translates to: LRRGSFWRPRHC*TLLVKVWGGDF
Trigger: AAAATCCCCACCCCACACTTTGACCAACAATGTCCAACAATGTCTCGGTCTCCAGAATGAACCTCTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CCA 72 bp GAGAGTCAGGAATACTGCACAGATACTGTTGACACCTaGCCAGGTAAGTTGAGAAGAGATTTGCAGCACCTG +
Preference number: 3 (lower is better)
Translates to: ESQEYCTDTVDT*PGKLRRDLQHL
Trigger: CAGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
3UTR-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTCTCACCCACCAACTTaGCAGCAGGGACATTCACAA +
Preference number: 3 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSHPPT*QQGHSQ
Trigger: TTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCTTCCAGTTTCTGTTaGTCTCAGCATCATGGATGG +
Preference number: 3 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDASSFC*SQHHGW
Trigger: CCATCCATGATGCTGAGACAAACAGAAACTGGAAGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 3 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLNLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACTTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 3 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 3 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTCCAAAGCCAACCCTaGACTCCCTTTTCTAAGACA +
Preference number: 3 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDFQSQP*TPFSKT
Trigger: TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAAACATTGTCACATCTaGCGTGGGAAGACAAGACAG +
Preference number: 3 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDKHCHI*RGKTRQ
Trigger: CTGTCTTGTCTTCCCACGCAAGATGTGACAATGTTT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp ACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATaGAACATGCCTTTGCTGGTGAGGGCAGTGATTTGG +
Preference number: 3 (lower is better)
Translates to: TIRFCCMFWQKE*NMPLLVRAVIW
Trigger: CCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR TCA 72 bp AGCTCTGTTGCAGCAGAACAAAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCTCAGAGCTCAAACTTT +
Preference number: 3 (lower is better)
Translates to: SSVAAEQRDFLP*PPHDQAQSSNF
Trigger: AAAGTTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCTTTGTTCTGCTGCAACAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR GCA 72 bp CTTGCTTCACAGCAATCAAGTAGGCAGAACGCAGTTTaGAACATATCAGGTAGGCCCGAACCTTGTTGTCAT +
Preference number: 3 (lower is better)
Translates to: LASQQSSRQNAV*NISGRPEPCCH
Trigger: ATGACAACAAGGTTCGGGCCTACCTGATATGTTGCAAACTGCGTTCTGCCTACTTGATTGCTGTGAAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 3 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFRETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 3 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 3 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 3 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCCTTTCTTTCCCTCTaGCCCGTGTTAGCCTCACAG +
Preference number: 3 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIAFLSL*PVLASQ
Trigger: CTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGCTTCCAGTTTCTGTTaGTCTCAGCATCATGGATGG +
Preference number: 3 (lower is better)
Translates to: NMGICFGGVFLLETTAWCASSFC*SQHHGW
Trigger: CCATCCATGATGCTGAGACAAACAGAAACTGGAAGC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp TTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTaGTCATTTATACACATACCCACAGCTTTCAGATGC +
Preference number: 3 (lower is better)
Translates to: FLSLLPVLASQT*SFIHIPTAFRC
Trigger: GCATCTGAAAGCTGTGGGTATGTGTATAAATGATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp AAAAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTaGGCACCAGAGACACTGACTTCAGCTTCCAGTTTC +
Preference number: 3 (lower is better)
Translates to: KNLGSEGNPQGF*APETLTSASSF
Trigger: GAAACTGGAAGCTGAAGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 3 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVRETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAAACATTGTCACATCTaGCGTGGGAAGACAAGACAG +
Preference number: 3 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFKHCHI*RGKTRQ
Trigger: CTGTCTTGTCTTCCCACGCAAGATGTGACAATGTTT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp ACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATaGCAGTTGATGGGTCCTCAACACAACAGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: TVHTPVLLESCS*QLMGPQHNSSS
Trigger: TGAGGAGCTGTTGTGTTGAGGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp ACCTCTGATAATACAGAAGCTGAGATACGGGTTGTATaGAACTATTGTGGGGAGCAAGGGATAAAGGTGACT +
Preference number: 3 (lower is better)
Translates to: TSDNTEAEIRVV*NYCGEQGIKVT
Trigger: AGTCACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTCTGTATTATCAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCCCACATTTGCAAATaGAAGTCACTGAGTATGACA +
Preference number: 3 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPHICK*KSLSMT
Trigger: TGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp TTATACACATACCCACAGCTTTCAGATGCCTGCACCTaGAAACCCTTCTATTCAGACTACCTTCCAAAGACT +
Preference number: 3 (lower is better)
Translates to: LYTYPQLSDACT*KPFYSDYLPKT
Trigger: AGTCTTTGGAAGGTAGTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGAAAGCTGTGGGTATGTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR TCA 72 bp TTTCTAGAAGGTGGAGAAGATGCTTTTGATGAAGGCTaGTTAAATGTTCTCTTGGAATGGGGTACAGGCAGC +
Preference number: 3 (lower is better)
Translates to: FLEGGEDAFDEG*LNVLLEWGTGS
Trigger: GCTGCCTGTACCCCATTCCAAGAGAACATTTAATCAGCCTTCATCAAAAGCATCTTCTCCACCTTCTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CCA 72 bp TCATCTATTTGGGGTTCAACTATAGGATTGGCACCATaGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAA +
Preference number: 3 (lower is better)
Translates to: SSIWGSTIGLAP*LLPGPCSNNSE
Trigger: TTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 3 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNRETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTCCAAAGCCAACCCTaGACTCCCTTTTCTAAGACA +
Preference number: 3 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLFQSQP*TPFSKT
Trigger: TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCACCTTTTCTCAAACATaGTCACATCTTGCGTGGGAA +
Preference number: 3 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLTFSQT*SHLAWE
Trigger: TTCCCACGCAAGATGTGACAATGTTTGAGAAAAGGT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCCCACATTTGCAAATaGAAGTCACTGAGTATGACA +
Preference number: 3 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPHICK*KSLSMT
Trigger: TGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTACTACTAAAAATCTaGGTTCAGAGGGAAATCCAC +
Preference number: 3 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLLLKI*VQREIH
Trigger: GTGGATTTCCCTCTGAACCAAGATTTTTAGTAGTAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTTGGGCACCCCGGGGGTaGCTTGTCAGAAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAWAPRG*LVRSHW
Trigger: CCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCA...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTGAGCTCATCACAGCCTaGGCCCTGGGTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAELITA*ALGPVQ
Trigger: CTGCACAGGACCCAGGGCCCAGGCTGTGATGAGCTC...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQDPGGD*GDVWQA
Trigger: AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTC...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCTGTGCAGCAGGCAGCTaGGCAGCCGCTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSCAAGS*AAAPPA
Trigger: TGCGGGAGGAGCGGCTGCTCAGCTGCCTGCTGCACA...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGGCCAGAGAAAGGCTCTaGGTCCGAAGGGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPARERL*VRRVAS
Trigger: GGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGC...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGACTGGCGGGCAGCTCTaGAGTAGGTCATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPTGGQL*SRSWQH
Trigger: ATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGT...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTGCAGGGCTCCATAGATaGCATCGACTACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAAGLHR*HRLPQG
Trigger: CCCCTGGGGTAGTCGATGCCATCTATGGAGCCCTGC...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 72 bp CTGAACTTCTCCCGTGCAGCAGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAAGCATGCCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: LNFSRAAVRFPA*RQAMPQACHAP
Trigger: CGGGGCGTGGCATGCTTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTTCTTCTGGAGGAGCTaGGTCTGGATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPFFWRS*VWICTG
Trigger: CCCTGTGCAGATCCAGACTCAGCTCCTCCAGAAGAA...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTGATTCAGGATGGCAATaGACAAGGAGGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQADSGWQ*TRRRWG
Trigger: CCCCCAGCGCCTCCTTGTGCATTGCCATCCTGAATC...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGCTACTGCATCCCCGCTaGTCTTGGCGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQLLHPR*SWRPAA
Trigger: TGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAG...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTACAGTGGAGGAGTCCTaGGCTCTGGCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQATVEES*ALAALV
Trigger: CACTAGAGCTGCCAGAGCCCAGGACTCCTCCACTGT...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 72 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGAGACTGGGGTGACGTG +
Preference number: 4 (lower is better)
Translates to: LNLCLGHLPGSF*SDDPGGDWGDV
Trigger: CACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGAAACCCAGAATCTTCTaGTACACCTGCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPKPRIF*YTCSSA
Trigger: GGCGGAGCTGCAGGTGTATCAGAAGATTCTGGGTTT...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCAGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTCACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGGCGGCCTGCTGCACCTaGTGGACAAGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWAACCT*WTRAVA
Trigger: GGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGC...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGTGGGAGAGGGTGGTGTaGCTGGCAACACAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQWERVV*LATQSS
Trigger: CGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCA...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGCCACCTCTGGGTTGGTaGGGCCCTTGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGPPLGW*GPWRAC
Trigger: GCAGGCTCTCCAAGGGCCTCACCAACCCAGAGGTGG...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGAAGGGCTGTGGCCCGTaGGTGTTCTTGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQKGCGP*VFLLHS
Trigger: GCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTT...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTCCTCACACAGGAGATaGAACTCAACCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPSSHRR*NSTPSG
Trigger: ACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGA...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAPFRNH*QRKALR
Trigger: ACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGG...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCTCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYASQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPCSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGTGGGCCTCTGCCTCTaGAGCTTTCTGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQVGLCL*SFLGCL
Trigger: CAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCAC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGGATCTGCACAGGGTaGGCCTCTGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AQMSCTTASPLLLAACCTWICTG*ASASGA
Trigger: AGCTCCAGAGGCAGAGGCCCACCCTGTGCAGATCCA...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGACCGATGCAAGAACCTaGTCACTTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPTDART*SLPSAA
Trigger: AGCTGCAGATGGAAGTGACCAGGTTCTTGCATCGGT...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGGCCTGCTGCACCTGCTaGACAAGGGCTGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGACCTC*TRAVAR
Trigger: ACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGC...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 72 bp GGGGTGGCTTGTCAGAAGCCACTGGGCACAGATGTCTaGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GVACQKPLGTDV*HYCIPAALGGL
Trigger: CAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAGCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTTTCCAGAGCTGGCACTaGGAGCAAGCTAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAFQSWH*EQARSN
Trigger: ATTTGACCTAGCTTGCTCTCAGTGCCAGCTCTGGAA...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTCAGAGCTCAAACTTTaGAGGAGAACTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPSELKL*RRTAAR
Trigger: CCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGA...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTCAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAQPCLK*SRPESP
Trigger: TGGAGATTCTGGCCTACTGCATTTCAGACACGGCTG...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCAAGGGCCTGTGCTGGCTaGGGAGACTGCCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPRACAG*GDCLRR
Trigger: TCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCT...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AQMSCTTASPLLLAACCTSGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCTCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENISQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGC +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQAFRST*SIRRPR
Trigger: GCGGGGTCGACGGATAGACCACGTACTCCTAAATGC...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGAGGCTGAGATTCTCTTaGGCCAGAAGGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQRLRFS*ARRAAS
Trigger: ACTGGCAGCCCTTCTGGCCCAAGAGAATCTCAGCCT...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGGAGGGCTTTCATTCTTaGAGCTGTCTAGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPEGFHS*SCLELL
Trigger: CAGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTC...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTGGAGCCTGGGCCATaGGCACCCCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSLEPGP*APRGWL
Trigger: AAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGCCCAAGGTCACTTCCTaGAGCCTGGGCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGPKVTS*SLGHGH
Trigger: GTGCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGG...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 72 bp TTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTCTCCGAATGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLLLQRCQWPVE*SGHCQFSEWCC
Trigger: GCAGCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTGTGCAGCAGGCAGCTaGGCAGCCGCTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSCAAGS*AAAPPA
Trigger: TGCGGGAGGAGCGGCTGCTCAGCTGCCTGCTGCACA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQRSGSR*SGETFP
Trigger: GGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCG...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCATCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPSRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCTCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYASRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGGTGGCACACTTAGGCTaGGATTCTCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQVAHLG*DSLGPE
Trigger: TTCTGGCCCAAGAGAATCTCAGCCTAAGTGTGCCAC...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMRSSRQ*EACSWA
Trigger: GGCCCAGCTACACGCCTCTCACTGCCTGGATGACCT...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACGGGCACAAATTCCTGTaGGGGCTGGGTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHGHKFL*GLGWWE
Trigger: TTCCCACCAACCCAGCCCTCACAGGAATTTGTGCCC...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQELSGH*QFSEWC
Trigger: GCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TGGCTGACTCTAGGCTCTGGCAGTGTGTCCAGCCCAGGAGTACAAGCAGGCAACCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: WLTLGSGSVSSPGVQAGNHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...GTTGCCTGCTTGTACTCCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQWSFLG*LLHQGR
Trigger: TCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCA...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDAMPQA*HAPVVS
Trigger: TGATACCACCGGGGCGTGGCATGCTTGGGGCATGGC...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTCTCTTGGCGGCCTGCTaGACCTGCTGGACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PATAATMMTPVKHGEVLPLLAAC*TCWTRA
Trigger: AGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAG...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGCTGCTCTTGGCGGCCTaGTGCACCTGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMLLLAA*CTCWTR
Trigger: CCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAG...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCAGTCCTCGCTTAGGCTaGGCCAGCACATCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: AQMSCTTASPLLLAACCTSPRLG*ASTSEA
Trigger: TGCTTCAGATGTGCTGGCCCAGCCTAAGCGAGGACT...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACACAAGTGGGAATAGCTaGCCCGGTGCTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHTSGNS*PGAAQA
Trigger: TGCCTGAGCAGCACCGGGCCAGCTATTCCCACTTGT...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCGGTGCAGATTCAGGATaGCAATGCACAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSGADSG*QCTRRR
Trigger: GCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACC...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTCTGGAGCCTGGGCCATaGGCACCCCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCLEPGP*APRGWL
Trigger: AAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAG...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACTGGAGCCTGGGCCATaGGCACCCCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGLEPGP*APRGWL
Trigger: AAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCACTTCCTGGAGCCTaGGCCATGGGCACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSLPGA*AMGTPG
Trigger: CCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGTCACTTCCTGGAGCCTaGGCCATGGGCACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: STPPFKATIQTPFGCLQKSLPGA*AMGTPG
Trigger: CCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGA...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTCACTTCCTGGAGCCTaGGCCATGGGCACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSLPGA*AMGTPG
Trigger: CCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CAA 72 bp CTGCGGCCACGAAGTTCCTTCCATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGGGAAGCCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRPRSSFHDKLG*LTFNLGEAPRQ
Trigger: CTGCCTGGGGGCTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGTGGCCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTTGTGCAGCAGGCAGCTaGGCAGCCGCTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCCAAGS*AAAPPA
Trigger: TGCGGGAGGAGCGGCTGCTCAGCTGCCTGCTGCACA...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSRSGSR*SGETFP
Trigger: GGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCG...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCTCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENISRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACCCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHPGSAP*TSVPLN
Trigger: GTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGG...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGCTGGCTTTGCCGGGATaGGCAAAGAGCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMLALPG*AKSKGL
Trigger: GAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAG...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQCSISW*PQAMLS
Trigger: GGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCA...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGGCAGAGGCAAAGTGGTaGTTTGAGAGGTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQAEAKW*FERSQH
Trigger: GTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGC...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAAGGTACACATGCCTGTaGCAGCTCCCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQRYTCL*QLPFSP
Trigger: AGGGGAGAATGGGAGCTGGCACAGGCATGTGTACCT...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCTCCTGGCACTGGGAGTaGTGGTGTGAGTTTACACAG +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSSWHWE*WCEFTQ
Trigger: CTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGA...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGTGGCCAAGCTAGTGTaGTGGTCGAGGGATTGCTCT +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQVAKLV*WSRDCS
Trigger: AGAGCAATCCCTCGACCAGCACACTAGCTTGGCCAC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCTCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LESSESTSSIVKPISCPTSGTHW*LAGGVA
Trigger: AGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGA...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSGTHW*LAGGVA
Trigger: AGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCACGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPARHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTG +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQRLGWD*RTGLAL
Trigger: CAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCG...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCCTTGCTGGGGGTCCTTaGCTGGCACTTTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSLAGGP*LALSVR
Trigger: TCTTACAGAAAGTGCCAGCCAAGGACCCCCAGCAAG...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCGCATCAGGCTCTTGCTaGGGGTCCTTGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLASGSC*GSLAGT
Trigger: AGTGCCAGCCAAGGACCCCCAGCAAGAGCCTGATGC...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGDPGGD*GDVWQA
Trigger: AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGCTCTCAGGGGAGCAGTaGGCTCCACTAGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQLSGEQ*APLEPC
Trigger: GCACGGCTCTAGTGGAGCCCACTGCTCCCCTGAGAG...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGC +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQAFRST*SIRRPR
Trigger: GCGGGGTCGACGGATAGACCACGTACTCCTAAATGC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCCACCAGGGAAGACAGTaGAGGAGTCCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQAHQGRQ*RSPGLW
Trigger: CCAGAGCCCAGGACTCCTCCACTGTCTTCCCTGGTG...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCCAGTCACACCACACTaGGGGAGACTGCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAPVTPH*GRLQTQ
Trigger: CTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGG...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCCCCGGCATCCACCTCTaGGTTGGTGAGGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVPGIHL*VGEALG
Trigger: TCCAAGGGCCTCACCAACCCAGAGGTGGATGCCGGG...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCATGGCGGCCCGAACTTaGTCCTTCATAAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSMAART*SFINCC
Trigger: GCAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCAT...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCTGGAGCCTGGGCCATaGGCACCCCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLLEPGP*APRGWL
Trigger: AAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTGTCCCTCCTGTAGCTaGGGTACACATGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFCPSCS*GTHACA
Trigger: GGCACAGGCATGTGTACCTCAGCTACAGGAGGGACA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSRQLRS*DEESSS
Trigger: AGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCT...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCACATCACAGGCATCCCTaGGGAGCTCATCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPAHHRHP*GAHHSL
Trigger: CAGGCTGTGATGAGCTCCTCAGGGATGCCTGTGATG...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSRWLCS*GQVLRE
Trigger: CTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCATTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDSEAVQ*CCTVEG
Trigger: GCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGA...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACGGGTGCTGCAGTAACTaGAGAAGGTGCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHGCCSN*RRCPSS
Trigger: ACTACTTGGGCACCTTCTTCAGTTACTGCAGCACCC...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSRSSRQ*EACSWA
Trigger: GGCCCAGCTACACGCCTCTCACTGCCTGGATGACCT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLRSSRQ*EACSWA
Trigger: GGCCCAGCTACACGCCTCTCACTGCCTGGATGACCT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERSSRQ*EACSWA
Trigger: GGCCCAGCTACACGCCTCTCACTGCCTGGATGACCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGCCCGTACACTTCAGTaGGCTGAAGGGCCCGGGACC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLARTLQ*AEGPGT
Trigger: GGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGCCCGTACACTTCAGTaGGCTGAAGGGCCCGGGACC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIARTLQ*AEGPGT
Trigger: GGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCAGCTGGCTGCAAGATCTaGTCCAAAGATGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPAGCKI*SKDGTW
Trigger: CCACGTGCCATCTTTGGATCAGATCTTGCAGCCAGC...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACGACTCCCCTCGGTCCTaGAGGCCTCTAGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDDSPRS*RPLVVP
Trigger: AGGAACTACTAGAGGCCTGCAGGACCGAGGGGAGTC...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGCTGACTCTAGGCTCTGGCAGTGTGTCCAGCCCAGGAGTACAAGCAGGCAACGACTGGAGCATCAACTaGATCAGGCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WLTLGSGSVSSPGVQAGNDWSIN*IRLLLG
Trigger: CCCCAGCAAGAGCCTGATGCAGTTGATGCTCCAGTC...GTTGCCTGCTTGTACTCCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCCTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AQMSCTTASPLLLAACCTLPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGCAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCATGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPAWSFLG*LLHQGR
Trigger: TCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCA...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGTTGGGCCAGAAGGGCTaGCAGTCTCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RWLLVTTLCLHWASETTLLGQKG*QSLWGN
Trigger: GTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAA...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCCAGAGGCACCTCCCTaGGGCCACGAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHPEAPP*GHEVPS
Trigger: GGAAGGAACTTCGTGGCCGCAGGGAGGTGCCTCTGG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCAGACTCTGCCCCTGCTaGAAAGACCCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSRLCPC*KDPRRG
Trigger: GCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCATGTTCATAAGCAGCTaGTCCAGCATGAACAGGGGG +
Preference number: 4 (lower is better)
Translates to: AQMSCTTASPLLLAACCTMFISS*SSMNRG
Trigger: CCCCCTGTTCATGCTGGAGCAGCTGCTTATGAACAT...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTTGGTCCTTCATAAACTaGTGCAGCTCATACAGAATG +
Preference number: 4 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQAWSFIN*CSSYRM
Trigger: CATTCTGTATGAGCTGCAGCAGTTTATGAAGGACCA...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTCTTGGCGGCCTGCTaGACCTGCTGGACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLLAAC*TCWTRA
Trigger: AGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTACTGCATCCCCGCTaGTCTTGGCGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLLHPR*SWRPAA
Trigger: TGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCTACTGCATCCCCGCTaGTCTTGGCGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLLHPR*SWRPAA
Trigger: TGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGTGGGCACAGATGTCTTaGACTACTGCATCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWWAQMS*TTASPL
Trigger: CAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCA...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGGGCCTGTGCTGGCTaGGGAGACTGCCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHRACAG*GDCLRR
Trigger: TCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGAGGGCCTGTGCTGGCTaGGGAGACTGCCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWRACAG*GDCLRR
Trigger: TCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCT...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACCAACTCAACCCCAAGTaGTTCTGCGGGGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDQLNPK*FCGATQ
Trigger: CTGCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTG...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTTCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVSQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGAGCTCATCACAGCCTaGGCCCTGGGTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSELITA*ALGPVQ
Trigger: CTGCACAGGACCCAGGGCCCAGGCTGTGATGAGCTC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGAGCTCATCACAGCCTaGGCCCTGGGTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEELITA*ALGPVQ
Trigger: CTGCACAGGACCCAGGGCCCAGGCTGTGATGAGCTC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTGCATCAGGCTCTTGCTaGGGGTCCTTGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLASGSC*GSLAGT
Trigger: AGTGCCAGCCAAGGACCCCCAGCAAGAGCCTGATGC...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATGGCACTGGGAGTGCTaGTGTGAGTTTACACAGAGG +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQWHWEC*CEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCA...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYDPGGD*GDVWQA
Trigger: AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTC...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATAGTCCTCCTGGAGCATaGGGATGGGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDSPPGA*GWGLQR
Trigger: CCTCTGGAGACCCCATCCCCATGCTCCAGGAGGACT...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTCTCAGGGGAGCAGTaGGCTCCACTAGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLSGEQ*APLEPC
Trigger: GCACGGCTCTAGTGGAGCCCACTGCTCCCCTGAGAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGAGTGATGCTGCACCGTaGAGGGCCTCCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMSDAAP*RASSLF
Trigger: GAAAAGGGAGGAGGCCCTCCACGGTGCAGCATCACT...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAGTGGAGGAGTCCTaGGCTCTGGCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLTVEES*ALAALV
Trigger: CACTAGAGCTGCCAGAGCCCAGGACTCCTCCACTGT...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGTGGGCCTCTGCCTCTaGAGCTTTCTGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSVGLCL*SFLGCL
Trigger: CAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCAC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTGTGGGCCTCTGCCTCTaGAGCTTTCTGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEAVGLCL*SFLGCL
Trigger: CAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCAC...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTCACTTCAAGGCACATaGTGGGGTCAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: AQMSCTTASPLLLAACCTSLQGT*WGQGFF
Trigger: GAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGA...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATCTGCACAGCCACAGTaGCCCAATCCACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQSAQPQ*PNPPSC
Trigger: ACATGAAGGTGGATTGGGCCACTGTGGCTGTGCAGA...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GCACAGATGTCTTGCACTACTGCATCCCCGCTGCTCTTGGCGGCCTGCTGCACCAATTCCTGTGAGGGCTaGGTTGGTGGGAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: AQMSCTTASPLLLAACCTNSCEG*VGGKLL
Trigger: AAGGAGTTTCCCACCAACCCAGCCCTCACAGGAATT...GGTGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSSGTH*CLAGGV
Trigger: GACACCCCCTGCCAGGCACCAGTGGGTACCGGATGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGAGSLA*LLQLAA
Trigger: TGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGC...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGCATCCCCGCTGCTCTTaGCGGCCTGCTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQHPRCS*RPAAPA
Trigger: AGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATG...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCCCAAGGTCACTTCCTaGAGCCTGGGCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSPKVTS*SLGHGH
Trigger: GTGCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTCAGGCCACGTGTTCCTaGCCCCACTGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCAQATCS*PHCPRS
Trigger: TGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTG...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCAGGCCACGTGTTCCTaGCCCCACTGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLQATCS*PHCPRS
Trigger: TGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCGAATGGACCAGCAGCTaGGTCAGAAGCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAEWTSS*VRSWTP
Trigger: TGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTC...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACCACACCACCAATGCCTaGAGTATGTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHHTTNA*SMSSTL
Trigger: GAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTG...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGCTACTCTTTGAGGGTTaGTGTCCTGCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQLLFEG*CPAHIS
Trigger: TGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAG...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCTCGGTGGCTTTTCTGTaGCCTTCTCTGCATAGGTAT +
Preference number: 4 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSSVAFL*PSLHRY
Trigger: ATACCTATGCAGAGAAGGTCACAGAAAAGCCACCGA...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTCATCACAGGCATCCCTaGGGAGCTCATCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLHHRHP*GAHHSL
Trigger: CAGGCTGTGATGAGCTCCTCAGGGATGCCTGTGATG...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIRWLCS*GQVLRE
Trigger: CTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENIQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGACCTTGACCTCCACATaGTCAGGCTCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQTLTST*SGSELK
Trigger: TTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAGGT...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTGGCTTTGCCGGGATaGGCAAAGAGCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLALPG*AKSKGL
Trigger: GAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGACGAAGTTCCTTCCATaGCAAGCTGGGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQTKFLP*QAGFAD
Trigger: GTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGT...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCCCGTACACTTCAGTaGGCTGAAGGGCCCGGGACC +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAARTLQ*AEGPGT
Trigger: GGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGC...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCTGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQACSISW*PQAMLS
Trigger: GGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCA...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAGGCTCTGGCCGGCTTTaGCGAACATCATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETGSGRL*RTSSWR
Trigger: GCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCC...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCATTTTCCCTCCCAGCATaGCCTTGCAGGCAACATCCA +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPFSLPA*PCRQHP
Trigger: TGGATGTTGCCTGCAAGGTCATGCTGGGAGGGAAAA...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCAGGTACACATGCCTGTaGCAGCTCCCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENIRYTCL*QLPFSP
Trigger: AGGGGAGAATGGGAGCTGGCACAGGCATGTGTACCT...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCTESGP*KARNAF
Trigger: AAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGT...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENITESGP*KARNAF
Trigger: AAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGT...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCANPKWF*GATQSP
Trigger: CGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTT...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATCCTCACACAGGAGATaGAACTCAACCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQSSHRR*NSTPSG
Trigger: ACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGA...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAACTGCATCAGGCTCTTaGTGGGGGTCCTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTTASGS*WGSLAG
Trigger: GCCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGT...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTACTGCATCAGGCTCTTaGTGGGGGTCCTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLTASGS*WGSLAG
Trigger: GCCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCTLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: PATAATMMTPVKHGEVLPKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTTGGGCCAGAAGGGCTaGCAGTCTCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLGQKG*QSLWGN
Trigger: GTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGGAGGGAGGAGGTCTaGTGGCTTTGCCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHRREEV*WLCRDE
Trigger: CTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCAGGAGGGAGGAGGTCTaGTGGCTTTGCCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: LESSESTSSIVKPISCPTRREEV*WLCRDE
Trigger: CTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCT...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCAGAGGCACCTCCCTaGGGCCACGAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPEAPP*GHEVPS
Trigger: GGAAGGAACTTCGTGGCCGCAGGGAGGTGCCTCTGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAGACTCTGCCCCTGCTaGAAAGACCCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLRLCPC*KDPRRG
Trigger: GCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGCCAGACTCTGCCCCTaGTGCAAAGACCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLARLCP*CKDPRR
Trigger: CCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLAMPQA*HAPVVS
Trigger: TGATACCACCGGGGCGTGGCATGCTTGGGGCATGGC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACTCTTGGCGGCCTGCTaGACCTGCTGGACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGLLAAC*TCWTRA
Trigger: AGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACTGCTCTTGGCGGCCTaGTGCACCTGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGLLLAA*CTCWTR
Trigger: CCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGCCAGGAGGCAGAGGTTaGAATGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMPGGRG*NEPRSR
Trigger: GCGCGATCTCGGCTCATTGCAACCTCTGCCTCCTGG...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAACTCGAGGATGTTCTCTaGAATGTCACCTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQLEDVL*NVTLEV
Trigger: GACCTCCAAGGTGACATTCCAGAGAACATCCTCGAG...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGCTCGAGGATGTTCTCTaGAATGTCACCTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQLEDVL*NVTLEV
Trigger: GACCTCCAAGGTGACATTCCAGAGAACATCCTCGAG...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCCCAGCTCTCCCTCCTTaGATTTCCGTCAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVPALPP*ISVRHV
Trigger: CACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGG...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAGGGCCTGTGCTGGCTaGGGAGACTGCCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLRACAG*GDCLRR
Trigger: TCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGGCAGGGCTCCATAGATaGCATCGACTACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: STPPFKATIQTPFGCLQKAGLHR*HRLPQG
Trigger: CCCCTGGGGTAGTCGATGCCATCTATGGAGCCCTGC...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTG +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLRLGWD*RTGLAL
Trigger: CAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCG...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCAADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGAGCTCATCACAGCCTaGGCCCTGGGTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQELITA*ALGPVQ
Trigger: CTGCACAGGACCCAGGGCCCAGGCTGTGATGAGCTC...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGTCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 4 (lower is better)
Translates to: RWLLVTTLCLHWASETTLSRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTCTGCAGCGCTGCCAATaGCCTGTAGAGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEALQRCQ*PVELSG
Trigger: GCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAG...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGTCCTCCTGGAGCATaGGGATGGGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESPPGA*GWGLQR
Trigger: CCTCTGGAGACCCCATCCCCATGCTCCAGGAGGACT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGGGAGAGGGTGGTGTaGCTGGCAACACAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHWERVV*LATQSS
Trigger: CGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGGGAGAGGGTGGTGTaGCTGGCAACACAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLWERVV*LATQSS
Trigger: CGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGGATCTGCACAGGGTaGGCCTCTGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHWICTG*ASASGA
Trigger: AGCTCCAGAGGCAGAGGCCCACCCTGTGCAGATCCA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGGATCTGCACAGGGTaGGCCTCTGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLWICTG*ASASGA
Trigger: AGCTCCAGAGGCAGAGGCCCACCCTGTGCAGATCCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTCCAGTCACACCACACTaGGGGAGACTGCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLPVTPH*GRLQTQ
Trigger: CTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGG...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSSGTH*CLAGGV
Trigger: GACACCCCCTGCCAGGCACCAGTGGGTACCGGATGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGCCACCTCATCTGCTTTaGGGACTCTCACCACAAACG +
Preference number: 4 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWPPHLL*GLSPQT
Trigger: CGTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGG...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCTGCACAAGGAGGCGCTaGGGGCCTGCTCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLCTRRR*GPAHSK
Trigger: TTTACTATGAGCAGGCCCCCAGCGCCTCCTTGTGCA...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCGCCAAGTCTTGGCTCTaGCCGGCTTTGACGAACATC +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQAAKSWL*PALTNI
Trigger: GATGTTCGTCAAAGCCGGCCAGAGCCAAGACTTGGC...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGGATCTGATCCAAAGATaGCACGTGGCGATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGDLIQR*HVAIGS
Trigger: GCTGCCTATCGCCACGTGCCATCTTTGGATCAGATC...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCGATCTGATCCAAAGATaGCACGTGGCGATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYADLIQR*HVAIGS
Trigger: GCTGCCTATCGCCACGTGCCATCTTTGGATCAGATC...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAGCTGGACAAGGGCTGTaGCCCGTGAGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQAGQGL*PVSVLA
Trigger: AGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGC...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGCCTGCTGCACCTGCTaGACAAGGGCTGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLACCTC*TRAVAR
Trigger: ACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGCCTGCTGCACCTGCTaGACAAGGGCTGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTACCTC*TRAVAR
Trigger: ACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTGGGCACCCCGGGGGTaGCTTGTCAGAAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLWAPRG*LVRSHW
Trigger: CCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGGGCACCCCGGGGGTaGCTTGTCAGAAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTWAPRG*LVRSHW
Trigger: CCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTGGAGCCTGGGCCATaGGCACCCCGGGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLEPGP*APRGWL
Trigger: AAGCCACCCCCGGGGTGCCCATGGCCCAGGCTCCAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCCAAGGTCACTTCCTaGAGCCTGGGCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPKVTS*SLGHGH
Trigger: GTGCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCAGGCCACGTGTTCCTaGCCCCACTGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIQATCS*PHCPRS
Trigger: TGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CAA 72 bp GTGAGAAGTGGCCAAGCTAGTGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCACATGGTGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VRSGQASVLVEG*LCHFKAHGGVR
Trigger: CCTGACCCCACCATGTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCACACTAGCTTGGCCACTTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 72 bp TCAGGTAGGCCCGAACCTTGTTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCAGCTCCTGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: SGRPEPCCHHCV*PGSGPPAPGAE
Trigger: TTCCGCCCCAGGAGCTGGAGGGCCTGATCCAGGCAATACACAATGATGACAACAAGGTTCGGGCCTACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCA +
Preference number: 4 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMFCRGQ*QRPVPS
Trigger: TGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAA...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGTGTGCAGCAGGCAGCTaGGCAGCCGCTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWCAAGS*AAAPPA
Trigger: TGCGGGAGGAGCGGCTGCTCAGCTGCCTGCTGCACA...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTGTGCAGCAGGCAGCTaGGCAGCCGCTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTCAAGS*AAAPPA
Trigger: TGCGGGAGGAGCGGCTGCTCAGCTGCCTGCTGCACA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCATCACAGGCATCCCTaGGGAGCTCATCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEHHRHP*GAHHSL
Trigger: CAGGCTGTGATGAGCTCCTCAGGGATGCCTGTGATG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLRWLCS*GQVLRE
Trigger: CTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYRWLCS*GQVLRE
Trigger: CTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESEAVQ*CCTVEG
Trigger: GCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCACCTTGACCTCCACATaGTCAGGCTCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYATLTST*SGSELK
Trigger: TTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAGGT...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCGTGGCACACTTAGGCTaGGATTCTCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQAVAHLG*DSLGPE
Trigger: TTCTGGCCCAAGAGAATCTCAGCCTAAGTGTGCCAC...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIRSSRQ*EACSWA
Trigger: GGCCCAGCTACACGCCTCTCACTGCCTGGATGACCT...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCAACAAGCTGGGTTTGCTaGCCTTTAACCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPATSWVC*PLTSGK
Trigger: CTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGT...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGGGCACAAATTCCTGTaGGGGCTGGGTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSGHKFL*GLGWWE
Trigger: TTCCCACCAACCCAGCCCTCACAGGAATTTGTGCCC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGCTCTGGCCGGCTTTaGCGAACATCATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGSGRL*RTSSWR
Trigger: GCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCTTCAGACAGCGACTaGACTTCTCCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLASDSD*TSPVQQ
Trigger: CTGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCGCTTCAGACAGCGACTaGACTTCTCCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LESSESTSSIVKPISCPTASDSD*TSPVQQ
Trigger: CTGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGC...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGCTTCAGACAGCGACTaGACTTCTCCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEASDSD*TSPVQQ
Trigger: CTGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGTTTGGCTGCCATGCCTaGCTCACTGACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGFGCHA*LTDTFE
Trigger: CTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAA...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGACGCTTCCAGGCAGTTaGGGAGGATGGTGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLTLPGS*GGWCPR
Trigger: ACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGT...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAAGGGCTGTGGCCCGTaGGTGTTCTTGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEKGCGP*VFLLHS
Trigger: GCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAATGAGGTCCACCAGTaGATTCTGCAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCNEVHQ*ILQRPV
Trigger: CACTGGCCTCTGCAGAATGCACTGGTGGACCTCATT...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGNPKWF*GATQSP
Trigger: CGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGACTCCCCTCGGTCCTaGAGGCCTCTAGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLDSPRS*RPLVVP
Trigger: AGGAACTACTAGAGGCCTGCAGGACCGAGGGGAGTC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGACTGCATCAGGCTCTTaGTGGGGGTCCTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLTASGS*WGSLAG
Trigger: GCCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGACTGCATCAGGCTCTTaGTGGGGGTCCTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQTASGS*WGSLAG
Trigger: GCCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGT...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSRCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGCTGACTCTAGGCTCTGGCAGTGTGTCCAGCCCAGGAGTACAAGCAGGCAACCCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: WLTLGSGSVSSPGVQAGNPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...GTTGCCTGCTTGTACTCCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGCACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RWLLVTTLCLHWASETTLHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: STPPFKATIQTPFGCLQKELSGH*QFSEWC
Trigger: GCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTC...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWELSGH*QFSEWC
Trigger: GCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTC...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLAFWAA*STREDS
Trigger: ACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTAGTAGTCCATCTGCCTaGTGCCTGATGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFSSPSA*CLMGSV
Trigger: AACAGACCCCATCAGGCAGCAGGCAGATGGACTACT...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATTGGGCCAGAAGGGCTaGCAGTCTCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGLGQKG*QSLWGN
Trigger: GTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCCCAGAGGCACCTCCCTaGGGCCACGAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSPEAPP*GHEVPS
Trigger: GGAAGGAACTTCGTGGCCGCAGGGAGGTGCCTCTGG...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGGTGGCCAAGCTAGTGTaGTGGTCGAGGGATTGCTCT +
Preference number: 4 (lower is better)
Translates to: RWLLVTTLCLHWASETTLVAKLV*WSRDCS
Trigger: AGAGCAATCCCTCGACCAGCACACTAGCTTGGCCAC...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTAGCTGCTGGAGAGTCTaGACAGCCACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCASCWRV*TATVAQ
Trigger: TTGGGCCACTGTGGCTGTGCAGACTCTCCAGCAGCT...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGCTGCTGGAGAGTCTaGACAGCCACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSCWRV*TATVAQ
Trigger: TTGGGCCACTGTGGCTGTGCAGACTCTCCAGCAGCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGCTGCTGGAGAGTCTaGACAGCCACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESCWRV*TATVAQ
Trigger: TTGGGCCACTGTGGCTGTGCAGACTCTCCAGCAGCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGTCCAACCAGCAGCTaGTGGAGAGTCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLCPTSS*WRVCTA
Trigger: GGCTGTGCAGACTCTCCAGCAGCTGCTGGTTGGACA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGGAGGGTCTCGGGATCTaGAGCCTGGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQEGLGI*SLVDNF
Trigger: GAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTC...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGATTCAGGATGGCAATaGACAAGGAGGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSDSGWQ*TRRRWG
Trigger: CCCCCAGCGCCTCCTTGTGCATTGCCATCCTGAATC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAGATTCAGGATGGCAATaGACAAGGAGGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTDSGWQ*TRRRWG
Trigger: CCCCCAGCGCCTCCTTGTGCATTGCCATCCTGAATC...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGCAATGCTGTCCCGGTaGAGATTCAGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSAMLSR*RFRMAM
Trigger: CATTGCCATCCTGAATCTGCACCGGGACAGCATTGC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLETELLP*SSEVPG
Trigger: GCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCCAGAGAAAGGCTCTaGGTCCGAAGGGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSARERL*VRRVAS
Trigger: GGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGCCAGAGAAAGGCTCTaGGTCCGAAGGGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEARERL*VRRVAS
Trigger: GGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGCGGCCTGCTGCACCTaGTGGACAAGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRAACCT*WTRAVA
Trigger: GGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCTGCTCTTGGCGGCCTaGTGCACCTGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLLLLAA*CTCWTR
Trigger: CCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACATGTTCCTGGCCCCACTaGCCAAGGTCACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETCSWPH*PRSLPG
Trigger: TCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACA...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATCTTCTTTGTCTGCTCTaGAGCCAGAGGCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDLLCLL*SQRHLP
Trigger: AGGGAGGTGCCTCTGGCTGCAGAGCAGACAAAGAAG...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCAGTCTTCTACCCTCTTTaGGATATCCCCTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPVFYPL*DIPLSL
Trigger: GAGGGACAAGGGGATATCCCAAAGAGGGTAGAAGAC...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVFPSGT*PTAPCV
Trigger: AACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAA...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGCCAGCTCTCCCTCCTTaGATTTCCGTCAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWPALPP*ISVRHV
Trigger: CACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGG...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGCAGGGCTCCATAGATaGCATCGACTACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIAGLHR*HRLPQG
Trigger: CCCCTGGGGTAGTCGATGCCATCTATGGAGCCCTGC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACACAACTCAACCCCAAGTaGTTCTGCGGGGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETQLNPK*FCGATQ
Trigger: CTGCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTG...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLSGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDSQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGCATCAGGCTCTTGCTaGGGGTCCTTGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLASGSC*GSLAGT
Trigger: AGTGCCAGCCAAGGACCCCCAGCAAGAGCCTGATGC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGCLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLDPGGD*GDVWQA
Trigger: AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTC...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEDPGGD*GDVWQA
Trigger: AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACTCTCAGGGGAGCAGTaGGCTCCACTAGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLSGEQ*APLEPC
Trigger: GCACGGCTCTAGTGGAGCCCACTGCTCCCCTGAGAG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATGGGAGAGGGTGGTGTaGCTGGCAACACAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGWERVV*LATQSS
Trigger: CGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTACAGTGGAGGAGTCCTaGGCTCTGGCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLTVEES*ALAALV
Trigger: CACTAGAGCTGCCAGAGCCCAGGACTCCTCCACTGT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWRCDTS*EELCCS
Trigger: GCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCT...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAAGGGAGGAGGTCTGCTaGCTTTGCCGGGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTREEVC*LCRDEQ
Trigger: TTGCTCATCCCGGCAAAGCCAGCAGACCTCCTCCCT...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAGGGAGGAGGTCTGCTaGCTTTGCCGGGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLREEVC*LCRDEQ
Trigger: TTGCTCATCCCGGCAAAGCCAGCAGACCTCCTCCCT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCCAGTCACACCACACTaGGGGAGACTGCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEPVTPH*GRLQTQ
Trigger: CTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTTCTGCACAGCCACAGTaGCCCAATCCACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: PATAATMMTPVKHGEVLPSAQPQ*PNPPSC
Trigger: ACATGAAGGTGGATTGGGCCACTGTGGCTGTGCAGA...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCTCGGGATCTGCAGCCTaGTGGACAATTTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENISGSAA*WTISWR
Trigger: CCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGA...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACTCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYSSGTH*CLAGGV
Trigger: GACACCCCCTGCCAGGCACCAGTGGGTACCGGATGA...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGTGCACAAGGAGGCGCTaGGGGCCTGCTCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: RWLLVTTLCLHWASETTLCTRRR*GPAHSK
Trigger: TTTACTATGAGCAGGCCCCCAGCGCCTCCTTGTGCA...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCCCCGGCATCCACCTCTaGGTTGGTGAGGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIPGIHL*VGEALG
Trigger: TCCAAGGGCCTCACCAACCCAGAGGTGGATGCCGGG...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACCCGGCATCCACCTCTaGGTTGGTGAGGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTPGIHL*VGEALG
Trigger: TCCAAGGGCCTCACCAACCCAGAGGTGGATGCCGGG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTCGGCTTCCAAAAGCTaGTTCCTTAGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHSASKS*FLSLVT
Trigger: AGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGA...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCATGCCACGCCCCGGTaGTATCAAGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSHATPR*YQAQSL
Trigger: CAAAGACTGGGCTTGATACCACCGGGGCGTGGCATG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGCCAAGGTTGGATCAATaGATTCTAGCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQPRLDQ*ILASSP
Trigger: TGGAGAACTTGCTAGAATCCATTGATCCAACCTTGG...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGGCCCTCCAGCTCCTaGGGCGGAATTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHRPSSS*GGILLN
Trigger: GTTCAAGAGAATTCCGCCCCAGGAGCTGGAGGGCCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGGCCCTCCAGCTCCTaGGGCGGAATTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERPSSS*GGILLN
Trigger: GTTCAAGAGAATTCCGCCCCAGGAGCTGGAGGGCCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGAGGCCCTCCAGCTCCTaGGGCGGAATTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLPKATGSKGSPFSQTGTRPSSS*GGILLN
Trigger: GTTCAAGAGAATTCCGCCCCAGGAGCTGGAGGGCCT...CGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTTCATTGTGTATTGCCTaGATCAGGCCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSSLCIA*IRPSSS
Trigger: GGAGCTGGAGGGCCTGATCCAGGCAATACACAATGA...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTCACTTCCTGGAGCCTaGGCCATGGGCACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSLPGA*AMGTPG
Trigger: CCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CAA 72 bp CAGCGCCTGGATTTCACGGTGTCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGTGAGGTAGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QRLDFTVSDSSQ*SIEVGGEVVGQ
Trigger: TTGGCCAACTACCTCACCACCCACTTCTATGGACAACTGACTGCTGTCCGACACCGTGAAATCCAGGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCCACACCACCAATGCCTaGAGTATGTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLHTTNA*SMSSTL
Trigger: GAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTG...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLETQATL*GLMSCP
Trigger: TGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIFCRGQ*QRPVPS
Trigger: TGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTTTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCA +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVFCRGQ*QRPVPS
Trigger: TGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAA...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSAMPFE*GPPVHS
Trigger: AGAATGCACTGGTGGACCTCATTCGAAAGGCATTGC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGGAGAGTGTAGAGCACTaGGTGGCTGTCTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: ILHGTEALVECQVLTLAQESVEH*VAVSTV
Trigger: CACGGTGGAGACAGCCACTCAGTGCTCTACACTCTC...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGAGGGCTGCGGCTACTaGTCTCATCCAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSEGCGY*SHPVAL
Trigger: AAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGAGGGCTGCGGCTACTaGTCTCATCCAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHEGCGY*SHPVAL
Trigger: AAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 4 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLPGSAP*TSVPLN
Trigger: GTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGCCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMPGSAP*TSVPLN
Trigger: GTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGG...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACCATGGCAGGGGGACTaGGGTCTTCCAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTPWQGD*GLPEPL
Trigger: GAGAGGTTCTGGAAGACCTCAGTCCCCCTGCCATGG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCCCATGGCAGGGGGACTaGGGTCTTCCAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSPWQGD*GLPEPL
Trigger: GAGAGGTTCTGGAAGACCTCAGTCCCCCTGCCATGG...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLISEAVQ*CCTVEG
Trigger: GCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTGGGCCAGCACATCTaGAGCAGTTCAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELGQHI*SSSVML
Trigger: CAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACACTGGGCCAGCACATCTaGAGCAGTTCAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETLGQHI*SSSVML
Trigger: CAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAG...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACATTCTTCTGGAGGAGCTaGGTCTGGATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTFFWRS*VWICTG
Trigger: CCCTGTGCAGATCCAGACTCAGCTCCTCCAGAAGAA...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTTCTTCTGGAGGAGCTaGGTCTGGATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSFFWRS*VWICTG
Trigger: CCCTGTGCAGATCCAGACTCAGCTCCTCCAGAAGAA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAGATCGTTTCTCCCTCTaGGGGTATGGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQDRFSL*GYGKSR
Trigger: CCTGGACTTTCCATACCCTCAGAGGGAGAAACGATC...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLCSISW*PQAMLS
Trigger: GGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACCACCTCTGGGTTGGTaGGGCCCTTGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEPPLGW*GPWRAC
Trigger: GCAGGCTCTCCAAGGGCCTCACCAACCCAGAGGTGG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCCCACCTCTGGGTTGGTaGGGCCCTTGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFPPLGW*GPWRAC
Trigger: GCAGGCTCTCCAAGGGCCTCACCAACCCAGAGGTGG...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCCACCTCTGGGTTGGTaGGGCCCTTGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTPPLGW*GPWRAC
Trigger: GCAGGCTCTCCAAGGGCCTCACCAACCCAGAGGTGG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCGGCTCTGGCCGGCTTTaGCGAACATCATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIGSGRL*RTSSWR
Trigger: GCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCC...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGGCTCTGGCCGGCTTTaGCGAACATCATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTGSGRL*RTSSWR
Trigger: GCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGCTTCAGACAGCGACTaGACTTCTCCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGASDSD*TSPVQQ
Trigger: CTGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCAGAGGACTCTCCTTGTTaGGAAGGTGCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPAEDSPC*EGAEEL
Trigger: AAGCTCTTCTGCACCTTCTCAACAAGGAGAGTCCTC...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCACTTTGCTTTGTGACTaGAGAACCGAATACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGTLLCD*RTEYRS
Trigger: TGACCTGTATTCGGTTCTTCAGTCACAAAGCAAAGT...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCAGAGGCAAAGTGGTaGTTTGAGAGGTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSAEAKW*FERSQH
Trigger: GTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATGGGACCAATAGGCTaGGCTCTGGCCAGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLMGPIG*ALASER
Trigger: CCTCTCACTGGCCAGAGCTCAGCCTATTGGTCCCAT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGCCACTCCAGCCTGGGTaGCGAGGGAAACTCAGAATC +
Preference number: 4 (lower is better)
Translates to: ILHGTEALVECQVLTLAQPLQPG*RGKLRI
Trigger: GATTCTGAGTTTCCCTCGTCACCCAGGCTGGAGTGG...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATAATGAGGTCCACCAGTaGATTCTGCAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDNEVHQ*ILQRPV
Trigger: CACTGGCCTCTGCAGAATGCACTGGTGGACCTCATT...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAACTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQLQSPQ*LSNEVH
Trigger: GTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAG...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTESGP*KARNAF
Trigger: AAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGGCTGTTACCAGAATCTaGTCGAGGAAGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQAVTRI*SRKCLL
Trigger: CAACAAACACTTCCTCGAGCAGATTCTGGTAACAGC...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGACTGGAGCATCAACTaGATCAGGCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSDWSIN*IRLLLG
Trigger: CCCCAGCAAGAGCCTGATGCAGTTGATGCTCCAGTC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCAACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HWASETTLESRCRRLCSPTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLELSGH*QFSEWC
Trigger: GCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCLLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLLLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCACTCCCGGGCTACCTaGTCTGCAGCCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRHSRAT*SAARGT
Trigger: GGTGCCTCTGGCTGCAGAGCAGGTAGCCCGGGAGTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCACTCCCGGGCTACCTaGTCTGCAGCCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTHSRAT*SAARGT
Trigger: GGTGCCTCTGGCTGCAGAGCAGGTAGCCCGGGAGTG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCCAGACTCTGCCCCTaGTGCAAAGACCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDARLCP*CKDPRR
Trigger: CCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTACCACAGAGATTCACTaGCAGACTCTGCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLTTEIH*QTLPLL
Trigger: CAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCCCGACTTCTCAGAGATaGATCCTTCACGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLPTSQR*ILHGKQ
Trigger: CTGTTTCCCGTGAAGGATGCATCTCTGAGAAGTCGG...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCAGCTCCTCAAGGTCTaGCAGTCACACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: FLALVVTTLNGPAAGSEAQLLKV*QSHHTG
Trigger: CCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGTGGCCAAGCTAGTGTaGTGGTCGAGGGATTGCTCT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHVAKLV*WSRDCS
Trigger: AGAGCAATCCCTCGACCAGCACACTAGCTTGGCCAC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGTGTCCAACCAGCAGCTaGTGGAGAGTCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLCPTSS*WRVCTA
Trigger: GGCTGTGCAGACTCTCCAGCAGCTGCTGGTTGGACA...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTGTCCAACCAGCAGCTaGTGGAGAGTCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLCPTSS*WRVCTA
Trigger: GGCTGTGCAGACTCTCCAGCAGCTGCTGGTTGGACA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTGTCCAACCAGCAGCTaGTGGAGAGTCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLICPTSS*WRVCTA
Trigger: GGCTGTGCAGACTCTCCAGCAGCTGCTGGTTGGACA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGAGGGTCTCGGGATCTaGAGCCTGGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEEGLGI*SLVDNF
Trigger: GAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGAGGGTCTCGGGATCTaGAGCCTGGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLEGLGI*SLVDNF
Trigger: GAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGDHRQ*CPGADS
Trigger: TGAATCTGCACCGGGACAGCATTGCCTGTGGTCACC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCGCTGAACAGCAGCTaGTTCATGATGTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSALNSS*FMMSVS
Trigger: GCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCGCTGAACAGCAGCTaGTTCATGATGTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLALNSS*FMMSVS
Trigger: GCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITELLP*SSEVPG
Trigger: GCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGCCAGAGAAAGGCTCTaGGTCCGAAGGGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLARERL*VRRVAS
Trigger: GGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACTGGCGGGCAGCTCTaGAGTAGGTCATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITGGQL*SRSWQH
Trigger: ATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAACTGGCGGGCAGCTCTaGAGTAGGTCATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGTGGQL*SRSWQH
Trigger: ATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGAGGCAGAACGCAGTTTaGAACATATCAGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMRQNAV*NISGRP
Trigger: GGGCCTACCTGATATGTTGCAAACTGCGTTCTGCCT...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCGGCCTGCTGCACCTaGTGGACAAGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQAACCT*WTRAVA
Trigger: GGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGATGTCTTGCACTACTaGATCCCCGCTGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLDVLHY*IPAALG
Trigger: GCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCGATGTCTTGCACTACTaGATCCCCGCTGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LESSESTSSIVKPISCPTDVLHY*IPAALG
Trigger: GCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATC...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGGGCACAGATGTCTTaGACTACTGCATCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHWAQMS*TTASPL
Trigger: CAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATGTTCCTGGCCCCACTaGCCAAGGTCACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGCSWPH*PRSLPG
Trigger: TCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACCTCGAGGATGTTCTCTaGAATGTCACCTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDLEDVL*NVTLEV
Trigger: GACCTCCAAGGTGACATTCCAGAGAACATCCTCGAG...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEFPSGT*PTAPCV
Trigger: AACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTGGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGGGCATAGATGGCATACTTTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PGTGSAGVSLHRGHRWHTFPSGT*PTAPCV
Trigger: AACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAA...AGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCAGCTCTCCCTCCTTaGATTTCCGTCAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPALPP*ISVRHV
Trigger: CACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTGGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGGGCATAGATGGCATACTCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTG +
Preference number: 4 (lower is better)
Translates to: PGTGSAGVSLHRGHRWHTRLGWD*RTGLAL
Trigger: CAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCG...AGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLSGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLISGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCAGGTGCTCAGGGACTaGAGCATCAACTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHQVLRD*SINCIR
Trigger: CCTGATGCAGTTGATGCTCCAGTCCCTGAGCACCTG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCAGGTGCTCAGGGACTaGAGCATCAACTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEQVLRD*SINCIR
Trigger: CCTGATGCAGTTGATGCTCCAGTCCCTGAGCACCTG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 4 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQTLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDCSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACCCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGTCCTCCTGGAGCATaGGGATGGGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSPPGA*GWGLQR
Trigger: CCTCTGGAGACCCCATCCCCATGCTCCAGGAGGACT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSAFRST*SIRRPR
Trigger: GCGGGGTCGACGGATAGACCACGTACTCCTAAATGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLAFRST*SIRRPR
Trigger: GCGGGGTCGACGGATAGACCACGTACTCCTAAATGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCAGTGATGCTGCACCGTaGAGGGCCTCCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLISDAAP*RASSLF
Trigger: GAAAAGGGAGGAGGCCCTCCACGGTGCAGCATCACT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAGTGATGCTGCACCGTaGAGGGCCTCCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSDAAP*RASSLF
Trigger: GAAAAGGGAGGAGGCCCTCCACGGTGCAGCATCACT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACAGTGGAGGAGTCCTaGGCTCTGGCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITVEES*ALAALV
Trigger: CACTAGAGCTGCCAGAGCCCAGGACTCCTCCACTGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCATGGATCTGCACAGGGTaGGCCTCTGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAWICTG*ASASGA
Trigger: AGCTCCAGAGGCAGAGGCCCACCCTGTGCAGATCCA...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAGGCTGAGATTCTCTTaGGCCAGAAGGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLRLRFS*ARRAAS
Trigger: ACTGGCAGCCCTTCTGGCCCAAGAGAATCTCAGCCT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGAGGGAGGAGGTCTGCTaGCTTTGCCGGGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQREEVC*LCRDEQ
Trigger: TTGCTCATCCCGGCAAAGCCAGCAGACCTCCTCCCT...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGGCTCGGTGTAGAAAGTaGGAGGTCATCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: STPPFKATIQTPFGCLQKARCRK*EVIQAV
Trigger: CACTGCCTGGATGACCTCCCACTTTCTACACCGAGC...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCCCGGGACCAATCTCTaGCCACCAAGGATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSPGTNL*PPRIPQ
Trigger: TTGAGGAATCCTTGGTGGCCAGAGATTGGTCCCGGG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAACACTTTAGTCCTTCTTaGACAGCCGTGTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQHFSPS*TAVSEM
Trigger: CATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTG...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCCAGTCACACCACACTaGGGGAGACTGCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIPVTPH*GRLQTQ
Trigger: CTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAGCCAAGCTAGTGTGCTaGTCGAGGGATTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETAKLVC*SRDCSV
Trigger: GACAGAGCAATCCCTCGACCAGCACACTAGCTTGGC...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGCCAAGCTAGTGTGCTaGTCGAGGGATTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHAKLVC*SRDCSV
Trigger: GACAGAGCAATCCCTCGACCAGCACACTAGCTTGGC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAACAAGTGGGAATAGCTaGCCCGGTGCTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGTSGNS*PGAAQA
Trigger: TGCCTGAGCAGCACCGGGCCAGCTATTCCCACTTGT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCGAGGGCTTTCATTCTTaGAGCTGTCTAGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAEGFHS*SCLELL
Trigger: CAGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTC...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGCACAAGGAGGCGCTaGGGGCCTGCTCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLCTRRR*GPAHSK
Trigger: TTTACTATGAGCAGGCCCCCAGCGCCTCCTTGTGCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGGTGCAGATTCAGGATaGCAATGCACAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLGADSG*QCTRRR
Trigger: GCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCCCGGCATCCACCTCTaGGTTGGTGAGGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDPGIHL*VGEALG
Trigger: TCCAAGGGCCTCACCAACCCAGAGGTGGATGCCGGG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGCCTGGTTACTGCAGCTaGCTGCAAGATCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMPGYCS*LQDLIQ
Trigger: TTGGATCAGATCTTGCAGCCAGCTGCAGTAACCAGG...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSAGSLA*LLQLAA
Trigger: TGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCATGCCACGCCCCGGTaGTATCAAGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLHATPR*YQAQSL
Trigger: CAAAGACTGGGCTTGATACCACCGGGGCGTGGCATG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTCATGCCACGCCCCGGTaGTATCAAGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCHATPR*YQAQSL
Trigger: CAAAGACTGGGCTTGATACCACCGGGGCGTGGCATG...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCCTGATTGAGGTCAAATaGGGGCTTCAGACAGCGACT +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLLIEVK*GLQTAT
Trigger: AGTCGCTGTCTGAAGCCCCCATTTGACCTCAATCAG...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCCAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCA +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQAQRASL*TLGTQP
Trigger: TGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTG...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGACCGAATACAGGTCATaGCGGCCCGAACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLPKATGSKGSPFSQTGTTEYRS*RPELGP
Trigger: AGGACCAAGTTCGGGCCGCCATGACCTGTATTCGGT...CGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACCGAATACAGGTCATaGCGGCCCGAACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTEYRS*RPELGP
Trigger: AGGACCAAGTTCGGGCCGCCATGACCTGTATTCGGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGTGTCCCCGTCACTTTTaGCTGCCATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LLPKATGSKGSPFSQTGTCPRHF*LPCLTH
Trigger: GTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACA...CGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTGTCCCCGTCACTTTTaGCTGCCATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSCPRHF*LPCLTH
Trigger: GTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTGTCCCCGTCACTTTTaGCTGCCATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLECPRHF*LPCLTH
Trigger: GTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCAGGCCCTCCAGCTCCTaGGGCGGAATTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIRPSSS*GGILLN
Trigger: GTTCAAGAGAATTCCGCCCCAGGAGCTGGAGGGCCT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCACTTGTCAGAAGCCACTaGGCACAGATGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPALVRSH*AQMSCT
Trigger: AGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAG...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGGGCACCCCGGGGGTaGCTTGTCAGAAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEWAPRG*LVRSHW
Trigger: CCAGTGGCTTCTGACAAGCCACCCCCGGGGTGCCCA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGGGACGAGTTCTTTGGCCCCTGAGGAGAGGTTCATTCTGGAGACCGAGACATGGCATCACCAGCGTTTaGAGACAATTCCGCTCACCT +
Preference number: 4 (lower is better)
Translates to: QGRVLWPLRRGSFWRPRHGITSV*RQFRSP
Trigger: AGGTGAGCGGAATTGTCTCCAAACGCTGGTGATGCC...ATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CAA 72 bp GGTTGCTCCTCTGAACGATGGTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCAGAGACAACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GCSSERWLLVTT*CLHWASETTLE
Trigger: TTCCAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 72 bp AAGTCTTGGCTCTGGCCGGCTTTGACGAACATCATCTaGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTG +
Preference number: 4 (lower is better)
Translates to: KSWLWPALTNII*ALNSSCFMMSV
Trigger: CACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCAAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCTQATL*GLMSCP
Trigger: TGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGT...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLTQATL*GLMSCP
Trigger: TGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSRQLRS*DEESSS
Trigger: AGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCT...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACGCTTCCAGGCAGTTGAGGAGGATGGTGTCCCCGTCACTTTTGGCTGCCATGTCGGTGGCTTTTCTGTaGCCTTCTCTGCATAGGTAT +
Preference number: 4 (lower is better)
Translates to: NASRQLRRMVSPSLLAAMSVAFL*PSLHRY
Trigger: ATACCTATGCAGAGAAGGTCACAGAAAAGCCACCGA...CATGGCAGCCAAAAGTGACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERSGSR*SGETFP
Trigger: GGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSRSGSR*SGETFP
Trigger: GGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCCATCACAGGCATCCCTaGGGAGCTCATCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSHHRHP*GAHHSL
Trigger: CAGGCTGTGATGAGCTCCTCAGGGATGCCTGTGATG...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGAGAGTGTAGAGCACTaGGTGGCTGTCTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLESVEH*VAVSTV
Trigger: CACGGTGGAGACAGCCACTCAGTGCTCTACACTCTC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLGVLV*VYTEGI
Trigger: TATGCCCTCTGTGTAAACTCACACCAGCACTCCCAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLRWLCS*GQVLRE
Trigger: CTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCG...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDRTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQARTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLENVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSNVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCATCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPASEAVQ*CCTVEG
Trigger: GCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGA...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTTCTTCTGGAGGAGCTaGGTCTGGATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLFFWRS*VWICTG
Trigger: CCCTGTGCAGATCCAGACTCAGCTCCTCCAGAAGAA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGGTGCTGCAGTAACTaGAGAAGGTGCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGCCSN*RRCPSS
Trigger: ACTACTTGGGCACCTTCTTCAGTTACTGCAGCACCC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGGGTGCTGCAGTAACTaGAGAAGGTGCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSGCCSN*RRCPSS
Trigger: ACTACTTGGGCACCTTCTTCAGTTACTGCAGCACCC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAGGTCATCCAGGCAGTaGGAGGCGTGTAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTRSSRQ*EACSWA
Trigger: GGCCCAGCTACACGCCTCTCACTGCCTGGATGACCT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAAACCCAGAATCTTCTaGTACACCTGCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLKPRIF*YTCSSA
Trigger: GGCGGAGCTGCAGGTGTATCAGAAGATTCTGGGTTT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGATCGTTTCTCCCTCTaGGGGTATGGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLDRFSL*GYGKSR
Trigger: CCTGGACTTTCCATACCCTCAGAGGGAGAAACGATC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAGATCGTTTCTCCCTCTaGGGGTATGGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTDRFSL*GYGKSR
Trigger: CCTGGACTTTCCATACCCTCAGAGGGAGAAACGATC...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGATCGTTTCTCCCTCTaGGGGTATGGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSDRFSL*GYGKSR
Trigger: CCTGGACTTTCCATACCCTCAGAGGGAGAAACGATC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGGGCACAAATTCCTGTaGGGGCTGGGTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAGHKFL*GLGWWE
Trigger: TTCCCACCAACCCAGCCCTCACAGGAATTTGTGCCC...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGGCTCTGGCCGGCTTTaGCGAACATCATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDGSGRL*RTSSWR
Trigger: GCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCGCACATCTACCTTGCTaGTGTAGCTGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLAHLPC*CSCHKE
Trigger: CTCTTTGTGACAGCTACATCAGCAAGGTAGATGTGC...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCCTAGGGCTCTCTGAGAGATTTTCCCTCCCAGCATaGCCTTGCAGGCAACATCCA +
Preference number: 4 (lower is better)
Translates to: SPPKDGGEVRDFLGLSERFSLPA*PCRQHP
Trigger: TGGATGTTGCCTGCAAGGTCATGCTGGGAGGGAAAA...TCTCTCAGAGAGCCCTAGGAAATCCCTCACCTCACCTCCATCTTTGGGTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTTTTCCCTCCCAGCATaGCCTTGCAGGCAACATCCA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHFSLPA*PCRQHP
Trigger: TGGATGTTGCCTGCAAGGTCATGCTGGGAGGGAAAA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGAAGGGCTGTGGCCCGTaGGTGTTCTTGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLKGCGP*VFLLHS
Trigger: GCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTAGGTACACATGCCTGTaGCAGCTCCCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCRYTCL*QLPFSP
Trigger: AGGGGAGAATGGGAGCTGGCACAGGCATGTGTACCT...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCAATGAGGTCCACCAGTaGATTCTGCAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSNEVHQ*ILQRPV
Trigger: CACTGGCCTCTGCAGAATGCACTGGTGGACCTCATT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLQSPQ*LSNEVH
Trigger: GTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLQSPQ*LSNEVH
Trigger: GTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGTESGP*KARNAF
Trigger: AAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGACTCCCCTCGGTCCTaGAGGCCTCTAGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTDSPRS*RPLVVP
Trigger: AGGAACTACTAGAGGCCTGCAGGACCGAGGGGAGTC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACGACTCCCCTCGGTCCTaGAGGCCTCTAGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYDSPRS*RPLVVP
Trigger: AGGAACTACTAGAGGCCTGCAGGACCGAGGGGAGTC...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGGCCCTGGGTCCTGTaGAGGGTCTGGAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGPWVL*RVWSSL
Trigger: GAGGCTGCTCCAGACCCTGCACAGGACCCAGGGCCC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTGCTGCTCTGCTGTATaGACCACTCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLICCSAV*TTPGPP
Trigger: TGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAGCA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTTGCTGCTCTGCTGTATaGACCACTCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVCCSAV*TTPGPP
Trigger: TGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAGCA...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGATGGGGTTGCTGCTCTaGTGTATGCACCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILHGTEALVECQVLTLAQMGLLL*CMHHSR
Trigger: CCTGGAGTGGTGCATACAGCAGAGCAGCAACCCCAT...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGACTGGAGCATCAACTaGATCAGGCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGDWSIN*IRLLLG
Trigger: CCCCAGCAAGAGCCTGATGCAGTTGATGCTCCAGTC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGACTGGAGCATCAACTaGATCAGGCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLDWSIN*IRLLLG
Trigger: CCCCAGCAAGAGCCTGATGCAGTTGATGCTCCAGTC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCTGGCACTGGGAGTaGTGGTGTGAGTTTACACAG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSWHWE*WCEFTQ
Trigger: CTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATCTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDLISSS*SWRSLR
Trigger: CCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAG...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCCGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFRCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCCGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSRCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYRCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLTLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: APWLLPGPCSNNSEWTSSTLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...GCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTELSGH*QFSEWC
Trigger: GCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLLLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTWSFLG*LLHQGR
Trigger: TCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAGGAGGGAGGAGGTCTaGTGGCTTTGCCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDRREEV*WLCRDE
Trigger: CTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCACTCCCGGGCTACCTaGTCTGCAGCCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFHSRAT*SAARGT
Trigger: GGTGCCTCTGGCTGCAGAGCAGGTAGCCCGGGAGTG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCAGACTCTGCCCCTGCTaGAAAGACCCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFRLCPC*KDPRRG
Trigger: GCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCT...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAGACTCTGCCCCTGCTaGAAAGACCCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTRLCPC*KDPRRG
Trigger: GCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGGCCAGACTCTGCCCCTaGTGCAAAGACCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWARLCP*CKDPRR
Trigger: CCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGC...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGCCAGACTCTGCCCCTaGTGCAAAGACCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRARLCP*CKDPRR
Trigger: CCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCACCACAGAGATTCACTaGCAGACTCTGCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: APWLLPGPCSNNSEWTSSTTEIH*QTLPLL
Trigger: CAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGT...GCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGCCGACTTCTCAGAGATaGATCCTTCACGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: RWLLVTTLCLHWASETTLPTSQR*ILHGKQ
Trigger: CTGTTTCCCGTGAAGGATGCATCTCTGAGAAGTCGG...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCCAGCTCCTCAAGGTCTaGCAGTCACACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFQLLKV*QSHHTG
Trigger: CCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTG...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGCTGGTCGAGGGATTaGTCTGTCACTTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLCWSRD*SVTSRH
Trigger: GTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGTGGCCAAGCTAGTGTaGTGGTCGAGGGATTGCTCT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIVAKLV*WSRDCS
Trigger: AGAGCAATCCCTCGACCAGCACACTAGCTTGGCCAC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGCTGCTGGAGAGTCTaGACAGCCACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSCWRV*TATVAQ
Trigger: TTGGGCCACTGTGGCTGTGCAGACTCTCCAGCAGCT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSGTHW*LAGGVA
Trigger: AGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCGAGCAGGGTTCTCTCTaGAGCCTTCAACCACCATTT +
Preference number: 4 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVEQGSL*SLQPPF
Trigger: AAATGGTGGTTGAAGGCTGCAGAGAGAACCCTGCTC...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGCAATGCTGTCCCGGTaGAGATTCAGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEAMLSR*RFRMAM
Trigger: CATTGCCATCCTGAATCTGCACCGGGACAGCATTGC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGDHRQ*CPGADS
Trigger: TGAATCTGCACCGGGACAGCATTGCCTGTGGTCACC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLAMPQA*HAPVVS
Trigger: TGATACCACCGGGGCGTGGCATGCTTGGGGCATGGC...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSITELLP*SSEVPG
Trigger: GCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGT...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTELLP*SSEVPG
Trigger: GCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCGCCAGAGAAAGGCTCTaGGTCCGAAGGGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIARERL*VRRVAS
Trigger: GGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGC...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHPFRNH*QRKALR
Trigger: ACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGCACTTTCGCACCGATaGAAGAACCTGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEALSHR*KNLVTS
Trigger: GGAAGTGACCAGGTTCTTGCATCGGTGCGAAAGTGC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACTGGCGGGCAGCTCTaGAGTAGGTCATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTGGQL*SRSWQH
Trigger: ATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCAAGCCTCAGCTCCACCTCTGATAATACAGAAGCTGAGATACGGGTTGTATGGACTGGCGGGCAGCTCTaGAGTAGGTCATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PSLSSTSDNTEAEIRVVWTGGQL*SRSWQH
Trigger: ATGCTGCCATGACCTACTGCAGAGCTGCCCGCCAGT...CCATACAACCCGTATCTCAGCTTCTGTATTATCAGAGGTGGAGCTGAGGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp CAGGGACGAGTTCTTTGGCCCCTGAGGAGAGGTTCATTCTGGAGACCGAGACATGTCATCATTGTGTATTaGCTGGATCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QGRVLWPLRRGSFWRPRHVIIVY*LDQALQ
Trigger: CTGGAGGGCCTGATCCAGGCAATACACAATGATGAC...ATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTCTTGGCGGCCTGCTaGACCTGCTGGACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLLAAC*TCWTRA
Trigger: AGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCTCTTGGCGGCCTGCTaGACCTGCTGGACAAGGGCT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLLAAC*TCWTRA
Trigger: AGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTGCTCTTGGCGGCCTaGTGCACCTGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLLLAA*CTCWTR
Trigger: CCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCTACTGCATCCCCGCTaGTCTTGGCGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLLHPR*SWRPAA
Trigger: TGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTGGGCACAGATGTCTTaGACTACTGCATCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIWAQMS*TTASPL
Trigger: CAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGTTCCTGGCCCCACTaGCCAAGGTCACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTCSWPH*PRSLPG
Trigger: TCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGACCTGCTCTGCTGTATaGACCACTCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLTCSAV*TTPGPP
Trigger: TGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAGGT...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCAATGTTCTTCAGTGGTaGCTTTGCTTCCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQANVLQW*LCFQWE
Trigger: CTCCCACTGGAAGCAAAGGCACCACTGAAGAACATT...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCACCAGCTCTCCCTCCTTaGATTTCCGTCAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAPALPP*ISVRHV
Trigger: CACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGG...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCCAGCTCTCCCTCCTTaGATTTCCGTCAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLPALPP*ISVRHV
Trigger: CACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTTTCCAAGCCTCGGCTaGGTTGGGATTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSFPSLG*VGIGEQ
Trigger: CTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTTTCCAAGCCTCGGCTaGGTTGGGATTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLFPSLG*VGIGEQ
Trigger: CTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSISGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCAGGTGCTCAGGGACTaGAGCATCAACTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIQVLRD*SINCIR
Trigger: CCTGATGCAGTTGATGCTCCAGTCCCTGAGCACCTG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGGCACTGGGAGTGCTaGTGTGAGTTTACACAGAGG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLWHWEC*CEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTTGCAGTCCTGGCACTaGGAGTGCTGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELQSWH*ECWCEF
Trigger: AAACTCACACCAGCACTCCCAGTGCCAGGACTGCAA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTGGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGGGCATAGATGGCATACTAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PGTGSAGVSLHRGHRWHTRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...AGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYACLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWSSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FLALVVTTLNGPAAGSEAPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCATCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPASRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTTGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGCTCTCAGGGGAGCAGTaGGCTCCACTAGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWLSGEQ*APLEPC
Trigger: GCACGGCTCTAGTGGAGCCCACTGCTCCCCTGAGAG...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTCTCAGGGGAGCAGTaGGCTCCACTAGAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLSGEQ*APLEPC
Trigger: GCACGGCTCTAGTGGAGCCCACTGCTCCCCTGAGAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAAGTGATGCTGCACCGTaGAGGGCCTCCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPASDAAP*RASSLF
Trigger: GAAAAGGGAGGAGGCCCTCCACGGTGCAGCATCACT...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGTGATGCTGCACCGTaGAGGGCCTCCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSDAAP*RASSLF
Trigger: GAAAAGGGAGGAGGCCCTCCACGGTGCAGCATCACT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAGAGGGTGGTGTGGCTaGCAACACAGTCCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLRGWCG*QHSPRL
Trigger: TAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGTGGGCCTCTGCCTCTaGAGCTTTCTGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRVGLCL*SFLGCL
Trigger: CAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCAC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAGGCTGCCAGTCTCTCTaGGGGAACTTGTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTGCQSL*GNLSLK
Trigger: TTTGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCC...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCCGGGACCAATCTCTaGCCACCAAGGATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPGTNL*PPRIPQ
Trigger: TTGAGGAATCCTTGGTGGCCAGAGATTGGTCCCGGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTTCAAGGCACATGGTaGGGTCAGGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELQGTW*GQGFFA
Trigger: TGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTGGGTCAGCAGAATCTTaGATCCCACATACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEAGSAES*IPHTAP
Trigger: AGGCGCTGTATGTGGGATCCAAGATTCTGCTGACCC...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTCTGCACAGCCACAGTaGCCCAATCCACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLSAQPQ*PNPPSC
Trigger: ACATGAAGGTGGATTGGGCCACTGTGGCTGTGCAGA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACATCGGGATCTGCAGCCTaGTGGACAATTTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTSGSAA*WTISWR
Trigger: CCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGA...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTCGGGATCTGCAGCCTaGTGGACAATTTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSGSAA*WTISWR
Trigger: CCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESSGTH*CLAGGV
Trigger: GACACCCCCTGCCAGGCACCAGTGGGTACCGGATGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCCACCTCATCTGCTTTaGGGACTCTCACCACAAACG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLPPHLL*GLSPQT
Trigger: CGTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGCAAAGAGCCAAGTCTTaGCTCTGGCCGGCTTTGACG +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLQRAKS*LWPALT
Trigger: CGTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTG...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCAAAGAGCCAAGTCTTaGCTCTGGCCGGCTTTGACG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIQRAKS*LWPALT
Trigger: CGTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGATCTGATCCAAAGATaGCACGTGGCGATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHDLIQR*HVAIGS
Trigger: GCTGCCTATCGCCACGTGCCATCTTTGGATCAGATC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGATCTGATCCAAAGATaGCACGTGGCGATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLDLIQR*HVAIGS
Trigger: GCTGCCTATCGCCACGTGCCATCTTTGGATCAGATC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIAGSLA*LLQLAA
Trigger: TGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTCAAGCCCAGTCTTTGTaGAGACCTCAACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEAQAQSL*RPQRPV
Trigger: AACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTG...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGCCCACTTTTATAGCTTaGTTGGAAAATGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: CWERVVWLATQSSLRLGQPTFIA*LENAFY
Trigger: ATAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGG...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGATGGCGGCCCGAACTTaGTCCTTCATAAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPKATGSKGSPFSQTGTMAART*SFINCC
Trigger: GCAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCAT...CGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAACCGAATACAGGTCATaGCGGCCCGAACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGTEYRS*RPELGP
Trigger: AGGACCAAGTTCGGGCCGCCATGACCTGTATTCGGT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTATGGCAGCATCCAGCTaGAAGTCCTGCAGAACACGG +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCMAASS*KSCRTR
Trigger: CCGTGTTCTGCAGGACTTCCAGCTGGATGCTGCCAT...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAATGGCAGCATCCAGCTaGAAGTCCTGCAGAACACGG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGMAASS*KSCRTR
Trigger: CCGTGTTCTGCAGGACTTCCAGCTGGATGCTGCCAT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTCTGCAGTAGGTCATaGCAGCATCCAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELCSRS*QHPAGS
Trigger: ACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTCTGCAGTAGGTCATaGCAGCATCCAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLCSRS*QHPAGS
Trigger: ACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGTGTCCCCGTCACTTTTaGCTGCCATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLCPRHF*LPCLTH
Trigger: GTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACA...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCCTAGGGCTCTCTGAGAGATCATTGTGTATTGCCTaGATCAGGCCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPPKDGGEVRDFLGLSERSLCIA*IRPSSS
Trigger: GGAGCTGGAGGGCCTGATCCAGGCAATACACAATGA...TCTCTCAGAGAGCCCTAGGAAATCCCTCACCTCACCTCCATCTTTGGGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGCTGGACAAGGGCTGTaGCCCGTGAGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLAGQGL*PVSVLA
Trigger: AGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCCTGCTGCACCTGCTaGACAAGGGCTGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQACCTC*TRAVAR
Trigger: ACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCATCCCCGCTGCTCTTaGCGGCCTGCTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCHPRCS*RPAAPA
Trigger: AGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCATCCCCGCTGCTCTTaGCGGCCTGCTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQHPRCS*RPAAPA
Trigger: AGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCATCCCCGCTGCTCTTaGCGGCCTGCTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFHPRCS*RPAAPA
Trigger: AGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGATG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACAGGCCACGTGTTCCTaGCCCCACTGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEQATCS*PHCPRS
Trigger: TGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGAAGCTGGGTCAGAAGCTaGACACCATCCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGSWVRS*TPSQAR
Trigger: CCTGGCCTGGGATGGTGTCCAGCTTCTGACCCAGCT...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGGGAGATACAAAGAAATaGGTTATGCCGAACACATTC +
Preference number: 4 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQGDTKK*VMPNTF
Trigger: GAATGTGTTCGGCATAACTCATTTCTTTGTATCTCC...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCCACACCACCAATGCCTaGAGTATGTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: LESSESTSSIVKPISCPTHTTNA*SMSSTL
Trigger: GAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTG...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTCTACTCTTTGAGGGTTaGTGTCCTGCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCALLFEG*CPAHIS
Trigger: TGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAG...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp AGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RWHTSWHRSPGRVSGSDTTQATL*GLMSCP
Trigger: TGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGT...AGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLAMPFE*GPPVHS
Trigger: AGAATGCACTGGTGGACCTCATTCGAAAGGCATTGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGAGGGCTGCGGCTACTaGTCTCATCCAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RWHTSWHRSPGRVSGSDTEGCGY*SHPVAL
Trigger: AAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTC...AGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCCCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIPGSAP*TSVPLN
Trigger: GTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGG...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTPGSAP*TSVPLN
Trigger: GTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGCCATGGCAGGGGGACTaGGGTCTTCCAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQPWQGD*GLPEPL
Trigger: GAGAGGTTCTGGAAGACCTCAGTCCCCCTGCCATGG...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACCATGGCAGGGGGACTaGGGTCTTCCAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEPWQGD*GLPEPL
Trigger: GAGAGGTTCTGGAAGACCTCAGTCCCCCTGCCATGG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATTTGGTTTGACTGGCTaGCATAAGCAGATAATTGAG +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQFGLTG*HKQIIE
Trigger: CTCAATTATCTGCTTATGTCAGCCAGTCAAACCAAA...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTCTCTCTGATTTGGTTTaGCTGGCTGACATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSLSDLV*LADISR
Trigger: TCTGCTTATGTCAGCCAGTCAAACCAAATCAGAGAG...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCCTCTCTGATTTGGTTTaGCTGGCTGACATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQALSDLV*LADISR
Trigger: TCTGCTTATGTCAGCCAGTCAAACCAAATCAGAGAG...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDSEAVQ*CCTVEG
Trigger: GCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTTCTTCTGGAGGAGCTaGGTCTGGATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLFFWRS*VWICTG
Trigger: CCCTGTGCAGATCCAGACTCAGCTCCTCCAGAAGAA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETRDFLP*PPHDQA
Trigger: AGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCT...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTCTGGCTTTGCCGGGATaGGCAAAGAGCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSLALPG*AKSKGL
Trigger: GAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAG...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACACGAAGTTCCTTCCATaGCAAGCTGGGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHTKFLP*QAGFAD
Trigger: GTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCTACACTTCAGTGAGCTaGAGGGCCCGGGACCAATCT +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIYTSVS*RARDQS
Trigger: AGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTA...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATACACTTCAGTGAGCTaGAGGGCCCGGGACCAATCT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTYTSVS*RARDQS
Trigger: AGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGCCCGTACACTTCAGTaGGCTGAAGGGCCCGGGACC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVARTLQ*AEGPGT
Trigger: GGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTTGGACAGCCGTGTCTaGAATGCAGTAGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLDSRV*NAVGQN
Trigger: ATTCTGGCCTACTGCATTTCAGACACGGCTGTCCAA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTHRSGW*GSWPRS
Trigger: ACTTCTTGGCCAACTACCTCACCACCCACTTCTATG...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHVSGKQ*VHLVHS
Trigger: ACTATGGACGAGGTGGACTCACTGCTTTCCAGATAC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGATCGTTTCTCCCTCTaGGGGTATGGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIDRFSL*GYGKSR
Trigger: CCTGGACTTTCCATACCCTCAGAGGGAGAAACGATC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGGCTCTGGCCGGCTTTaGCGAACATCATCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRGSGRL*RTSSWR
Trigger: GCGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATCATGATTCAGCTGATTaGGGTCAAATGGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDHDSAD*GQMGAS
Trigger: TGAAGCCCCCATTTGACCTCAATCAGCTGAATCATG...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACATCCTGCACCAGCCTTaGGCCATGATTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHILHQP*AMIQLI
Trigger: AATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGAT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTATCCTGCACCAGCCTTaGGCCATGATTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLILHQP*AMIQLI
Trigger: AATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGAT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCACTTCCATCTGCAGCTaGAGTGTGTTCATGTGCCTT +
Preference number: 4 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVTSICS*SVFMCL
Trigger: AAGGCACATGAACACACTTCAGCTGCAGATGGAAGT...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GGGAAGATTTTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGGCAGAGGCAAAGTGGTaGTTTGAGAGGTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKIFILTGTPPKGNGKQRAEAKW*FERSQH
Trigger: GTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGC...CCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAAAATCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTTTGGCTGCCATGCCTaGCTCACTGACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLFGCHA*LTDTFE
Trigger: CTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTTTGGCTGCCATGCCTaGCTCACTGACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSFGCHA*LTDTFE
Trigger: CTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATCCAAGCCTCAGCTCCACCTCTGATAATACAGAAGCTGAGATACGGGTTGTATACGCTTCCAGGCAGTTaGGGAGGATGGTGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: IQASAPPLIIQKLRYGLYTLPGS*GGWCPR
Trigger: ACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGT...ATACAACCCGTATCTCAGCTTCTGTATTATCAGAGGTGGAGCTGAGGCTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAATCCACAGGGTTTCTaGGCACCAGAGACACTGACT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLNPQGF*APETLT
Trigger: AGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACATGTCCCACCTTGTTaGGAAGGTGCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTHVPPC*EGAEEL
Trigger: AAGCTCTTCTGCACCTTCTCAACAAGGTGGGACATG...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCACCCAAAGATGGAGGTaGGGTGAGGGATTTCCTAGG +
Preference number: 4 (lower is better)
Translates to: WEPQSISPPKDGGEVRDFTQRWR*GEGFPR
Trigger: CCTAGGAAATCCCTCACCTCACCTCCATCTTTGGGT...GAAATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTTGGACACACCACCAATaGCTGAAGTATGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: PATAATMMTPVKHGEVLPWTHHQ*LKYVFY
Trigger: GTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCA...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTGGACACACCACCAATaGCTGAAGTATGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFWTHHQ*LKYVFY
Trigger: GTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSNPKWF*GATQSP
Trigger: CGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTT...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGENPKWF*GATQSP
Trigger: CGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGACTCCCCTCGGTCCTaGAGGCCTCTAGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDDSPRS*RPLVVP
Trigger: AGGAACTACTAGAGGCCTGCAGGACCGAGGGGAGTC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTTCTGTGACCTTCTCTaGATAGGTATGGCCATACAG +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFFCDLL*IGMAIQ
Trigger: CTGTATGGCCATACCTATGCAGAGAAGGTCACAGAA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCATGCTGCTCTGCTGTATaGACCACTCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPACCSAV*TTPGPP
Trigger: TGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAGCA...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGCTGCTCTGCTGTATaGACCACTCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTCCSAV*TTPGPP
Trigger: TGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAGCA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSLPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGCTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWLPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp CCCCGGTGGTATCAAGCCCAGTCTTTGTGGAGACCTCAACGCCCAGTTGGTAGTGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PRWYQAQSLWRPQRPVGSEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...ACTACCAACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATACCACCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLISSS*SWRSLR
Trigger: CCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGCTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: STPPFKATIQTPFGCLQKLISSS*SWRSLR
Trigger: CCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAG...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSLISSS*SWRSLR
Trigger: CCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCACACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTGGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGGGCATAGATGGCATACTTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PGTGSAGVSLHRGHRWHTFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...AGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCAVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCTCCACTAGAGCCGTaGTTATCCAAAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSAPLEP*LSKSPP
Trigger: AGGAGGACTTTTGGATAAGCACGGCTCTAGTGGAGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCTCCACTAGAGCCGTaGTTATCCAAAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLAPLEP*LSKSPP
Trigger: AGGAGGACTTTTGGATAAGCACGGCTCTAGTGGAGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLAFWAA*STREDS
Trigger: ACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGC...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDAFWAA*STREDS
Trigger: ACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAGTAGTCCATCTGCCTaGTGCCTGATGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSSPSA*CLMGSV
Trigger: AACAGACCCCATCAGGCAGCAGGCAGATGGACTACT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCTTGGGCCAGAAGGGCTaGCAGTCTCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFLGQKG*QSLWGN
Trigger: GTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAA...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAGGAGGGAGGAGGTCTaGTGGCTTTGCCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGERREEV*WLCRDE
Trigger: CTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCCCAGAGGCACCTCCCTaGGGCCACGAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSPEAPP*GHEVPS
Trigger: GGAAGGAACTTCGTGGCCGCAGGGAGGTGCCTCTGG...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCCAGAGGCACCTCCCTaGGGCCACGAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCPEAPP*GHEVPS
Trigger: GGAAGGAACTTCGTGGCCGCAGGGAGGTGCCTCTGG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTTCACTGCCAGACTCTaGCCCTGCTGCAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLFTARL*PCCKDP
Trigger: AGGGTCTTTGCAGCAGGGGCAGAGTCTGGCAGTGAA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACAACCTTCTTTGTCACATaGCACAGCACAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTTFFVT*HSTAQD
Trigger: GTCCTGAGCTGTGCTGTGGCATGTGACAAAGAAGGT...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACACCTTCTTTGTCACATaGCACAGCACAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHTFFVT*HSTAQD
Trigger: GTCCTGAGCTGTGCTGTGGCATGTGACAAAGAAGGT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCCGACTTCTCAGAGATaGATCCTTCACGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEPTSQR*ILHGKQ
Trigger: CTGTTTCCCGTGAAGGATGCATCTCTGAGAAGTCGG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCCGACTTCTCAGAGATaGATCCTTCACGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSPTSQR*ILHGKQ
Trigger: CTGTTTCCCGTGAAGGATGCATCTCTGAGAAGTCGG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATGCTGGTCGAGGGATTaGTCTGTCACTTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGCWSRD*SVTSRH
Trigger: GTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGTGGCCAAGCTAGTGTaGTGGTCGAGGGATTGCTCT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLVAKLV*WSRDCS
Trigger: AGAGCAATCCCTCGACCAGCACACTAGCTTGGCCAC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACATGTTCATAAGCAGCTaGTCCAGCATGAACAGGGGG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHMFISS*SSMNRG
Trigger: CCCCCTGTTCATGCTGGAGCAGCTGCTTATGAACAT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTTCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFSGTHW*LAGGVA
Trigger: AGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGA...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSGTHW*LAGGVA
Trigger: AGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQAMPQA*HAPVVS
Trigger: TGATACCACCGGGGCGTGGCATGCTTGGGGCATGGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPFRNH*QRKALR
Trigger: ACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCTTCCTTCCAGAGCTaGGGGATGTTTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSSFQS*GMFLGG
Trigger: ACCTCCAAGAAACATCCCGCAGCTCTGGAAGGAAGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGCACTTTCGCACCGATaGAAGAACCTGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGALSHR*KNLVTS
Trigger: GGAAGTGACCAGGTTCTTGCATCGGTGCGAAAGTGC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTGTCATCATTGTGTATTaGCTGGATCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEAVIIVY*LDQALQ
Trigger: CTGGAGGGCCTGATCCAGGCAATACACAATGATGAC...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGGCAGAACGCAGTTTaGAACATATCAGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHRQNAV*NISGRP
Trigger: GGGCCTACCTGATATGTTGCAAACTGCGTTCTGCCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCAGGCAGAACGCAGTTTaGAACATATCAGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSRQNAV*NISGRP
Trigger: GGGCCTACCTGATATGTTGCAAACTGCGTTCTGCCT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGATGTCTTGCACTACTaGATCCCCGCTGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTDVLHY*IPAALG
Trigger: GCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTCCAGGACTTCTTGTaGTTGGGAGAAGAGACACCT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLQDFL*LGEETP
Trigger: AGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCGAGATTTGCAGCACCTaGTCTGCTGTATGCACCACT +
Preference number: 4 (lower is better)
Translates to: LESSESTSSIVKPISCPTEICST*SAVCTT
Trigger: AGTGGTGCATACAGCAGAGCAGGTGCTGCAAATCTC...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCGGGAAACTCAGAATCTaGTCGAGGAAGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENIGKLRI*SRKCLL
Trigger: CAACAAACACTTCCTCGAGCAGATTCTGAGTTTCCC...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGTCTTCTACCCTCTTTaGGATATCCCCTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHVFYPL*DIPLSL
Trigger: GAGGGACAAGGGGATATCCCAAAGAGGGTAGAAGAC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTCGAGGATGTTCTCTaGAATGTCACCTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSLEDVL*NVTLEV
Trigger: GACCTCCAAGGTGACATTCCAGAGAACATCCTCGAG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLFPSGT*PTAPCV
Trigger: AACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGTTTCCAAGCCTCGGCTaGGTTGGGATTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQFPSLG*VGIGEQ
Trigger: CTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAA...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGTTTCCAAGCCTCGGCTaGGTTGGGATTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLFPSLG*VGIGEQ
Trigger: CTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAA...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTTTCCAAGCCTCGGCTaGGTTGGGATTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLFPSLG*VGIGEQ
Trigger: CTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACTTGCTGGGGGTCCTTaGCTGGCACTTTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGLAGGP*LALSVR
Trigger: TCTTACAGAAAGTGCCAGCCAAGGACCCCCAGCAAG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCTTGCTGGGGGTCCTTaGCTGGCACTTTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLLAGGP*LALSVR
Trigger: TCTTACAGAAAGTGCCAGCCAAGGACCCCCAGCAAG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCATCAGGCTCTTGCTaGGGGTCCTTGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEASGSC*GSLAGT
Trigger: AGTGCCAGCCAAGGACCCCCAGCAAGAGCCTGATGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGCACAGAGGGCATAGATaGCATACTTCATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RWLLVTTLCLHWASETTLHRGHR*HTSWHR
Trigger: TCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTG...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTGGCACTGGGAGTGCTaGTGTGAGTTTACACAGAGG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIWHWEC*CEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTTGGCACTGGGAGTGCTaGTGTGAGTTTACACAGAGG +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVWHWEC*CEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCA...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGTTGCAGTCCTGGCACTaGGAGTGCTGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: ILHGTEALVECQVLTLAQLQSWH*ECWCEF
Trigger: AAACTCACACCAGCACTCCCAGTGCCAGGACTGCAA...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCATGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPACLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLCSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDSRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACCCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCTGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSICQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGAGTCCTCCTGGAGCATaGGGATGGGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILSPPGA*GWGLQR
Trigger: CCTCTGGAGACCCCATCCCCATGCTCCAGGAGGACT...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAGTCCTCCTGGAGCATaGGGATGGGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESPPGA*GWGLQR
Trigger: CCTCTGGAGACCCCATCCCCATGCTCCAGGAGGACT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTGGGAGAGGGTGGTGTaGCTGGCAACACAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLWERVV*LATQSS
Trigger: CGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCA...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACACCAGGGAAGACAGTaGAGGAGTCCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEHQGRQ*RSPGLW
Trigger: CCAGAGCCCAGGACTCCTCCACTGTCTTCCCTGGTG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCACCAGGGAAGACAGTaGAGGAGTCCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRHQGRQ*RSPGLW
Trigger: CCAGAGCCCAGGACTCCTCCACTGTCTTCCCTGGTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCACCAGGGAAGACAGTaGAGGAGTCCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTHQGRQ*RSPGLW
Trigger: CCAGAGCCCAGGACTCCTCCACTGTCTTCCCTGGTG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGTGGGCCTCTGCCTCTaGAGCTTTCTGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFVGLCL*SFLGCL
Trigger: CAGGCAGCCCAGAAAGCTCCAGAGGCAGAGGCCCAC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSRCDTS*EELCCS
Trigger: GCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHRCDTS*EELCCS
Trigger: GCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAAGGCTGAGATTCTCTTaGGCCAGAAGGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPARLRFS*ARRAAS
Trigger: ACTGGCAGCCCTTCTGGCCCAAGAGAATCTCAGCCT...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGAGGCTGAGATTCTCTTaGGCCAGAAGGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLRLRFS*ARRAAS
Trigger: ACTGGCAGCCCTTCTGGCCCAAGAGAATCTCAGCCT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCGCTCGGTGTAGAAAGTaGGAGGTCATCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIARCRK*EVIQAV
Trigger: CACTGCCTGGATGACCTCCCACTTTCTACACCGAGC...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCCCGGGACCAATCTCTaGCCACCAAGGATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLPGTNL*PPRIPQ
Trigger: TTGAGGAATCCTTGGTGGCCAGAGATTGGTCCCGGG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCCAGTCACACCACACTaGGGGAGACTGCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDPVTPH*GRLQTQ
Trigger: CTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGGGTCAGCAGAATCTTaGATCCCACATACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIGSAES*IPHTAP
Trigger: AGGCGCTGTATGTGGGATCCAAGATTCTGCTGACCC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCTGCACAGCCACAGTaGCCCAATCCACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSAQPQ*PNPPSC
Trigger: ACATGAAGGTGGATTGGGCCACTGTGGCTGTGCAGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACCACCTCATCTGCTTTaGGGACTCTCACCACAAACG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGPPHLL*GLSPQT
Trigger: CGTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGGTGCAGATTCAGGATaGCAATGCACAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTGADSG*QCTRRR
Trigger: GCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGCCAAGTCTTGGCTCTaGCCGGCTTTGACGAACATC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLAKSWL*PALTNI
Trigger: GATGTTCGTCAAAGCCGGCCAGAGCCAAGACTTGGC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTAGSLA*LLQLAA
Trigger: TGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCATGCCACGCCCCGGTaGTATCAAGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDHATPR*YQAQSL
Trigger: CAAAGACTGGGCTTGATACCACCGGGGCGTGGCATG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGCTGATTGAGGTCAAATaGGGGCTTCAGACAGCGACT +
Preference number: 4 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMLIEVK*GLQTAT
Trigger: AGTCGCTGTCTGAAGCCCCCATTTGACCTCAATCAG...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTGATTGAGGTCAAATaGGGGCTTCAGACAGCGACT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSLIEVK*GLQTAT
Trigger: AGTCGCTGTCTGAAGCCCCCATTTGACCTCAATCAG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACACCGAATACAGGTCATaGCGGCCCGAACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYTEYRS*RPELGP
Trigger: AGGACCAAGTTCGGGCCGCCATGACCTGTATTCGGT...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACCGATGCAAGAACCTaGTCACTTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTDART*SLPSAA
Trigger: AGCTGCAGATGGAAGTGACCAGGTTCTTGCATCGGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAATGGCAGCATCCAGCTaGAAGTCCTGCAGAACACGG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTMAASS*KSCRTR
Trigger: CCGTGTTCTGCAGGACTTCCAGCTGGATGCTGCCAT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGCATTTGAGCAGTTGCTaGATCTCACTGTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWHLSSC*ISLYFS
Trigger: AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATG...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGTCCCCGTCACTTTTaGCTGCCATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTCPRHF*LPCLTH
Trigger: GTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCTGGACAAGGGCTGTaGCCCGTGAGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDAGQGL*PVSVLA
Trigger: AGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCCAAGGTCACTTCCTaGAGCCTGGGCCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPKVTS*SLGHGH
Trigger: GTGCCCATGGCCCAGGCTCCAGGAAGTGACCTTGGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGGAAGATTTTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGCAGGGACGAGTTCTTTaGCCCCTGAGGAGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GKIFILTGTPPKGNGKQRQGRVL*PLRRGS
Trigger: TGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG...CCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAAAATCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGCACTCCACTCCAGCCTaGGTGACGAGGGAAACTCAG +
Preference number: 4 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLHSTPA*VTRETQ
Trigger: CTGAGTTTCCCTCGTCACCCAGGCTGGAGTGGAGTG...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTGTCCCTCCTGTAGCTaGGGTACACATGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTCPSCS*GTHACA
Trigger: GGCACAGGCATGTGTACCTCAGCTACAGGAGGGACA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGTCCCTCCTGTAGCTaGGGTACACATGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGECPSCS*GTHACA
Trigger: GGCACAGGCATGTGTACCTCAGCTACAGGAGGGACA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCACACCACCAATGCCTaGAGTATGTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLHTTNA*SMSSTL
Trigger: GAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTRQLRS*DEESSS
Trigger: AGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCTTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCA +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFFCRGQ*QRPVPS
Trigger: TGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAA...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGAMPFE*GPPVHS
Trigger: AGAATGCACTGGTGGACCTCATTCGAAAGGCATTGC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVAMPFE*GPPVHS
Trigger: AGAATGCACTGGTGGACCTCATTCGAAAGGCATTGC...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTGTGCAGCAGGCAGCTaGGCAGCCGCTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLCAAGS*AAAPPA
Trigger: TGCGGGAGGAGCGGCTGCTCAGCTGCCTGCTGCACA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTGTGCAGCAGGCAGCTaGGCAGCCGCTCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNICAAGS*AAAPPA
Trigger: TGCGGGAGGAGCGGCTGCTCAGCTGCCTGCTGCACA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCGGTGGCTTTTCTGTaGCCTTCTCTGCATAGGTAT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESVAFL*PSLHRY
Trigger: ATACCTATGCAGAGAAGGTCACAGAAAAGCCACCGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLRSGSR*SGETFP
Trigger: GGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCATCACAGGCATCCCTaGGGAGCTCATCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRHHRHP*GAHHSL
Trigger: CAGGCTGTGATGAGCTCCTCAGGGATGCCTGTGATG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGAGAGTGTAGAGCACTaGGTGGCTGTCTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRESVEH*VAVSTV
Trigger: CACGGTGGAGACAGCCACTCAGTGCTCTACACTCTC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGAGAGTGTAGAGCACTaGGTGGCTGTCTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTESVEH*VAVSTV
Trigger: CACGGTGGAGACAGCCACTCAGTGCTCTACACTCTC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLGVLV*VYTEGI
Trigger: TATGCCCTCTGTGTAAACTCACACCAGCACTCCCAG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCCTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFLGVLV*VYTEGI
Trigger: TATGCCCTCTGTGTAAACTCACACCAGCACTCCCAG...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYNVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCATGGCAGGGGGACTaGGGTCTTCCAGAACCTCTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPWQGD*GLPEPL
Trigger: GAGAGGTTCTGGAAGACCTCAGTCCCCCTGCCATGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCTGAAGCAGTTCAGTaGTGCTGCACCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESEAVQ*CCTVEG
Trigger: GCCCTCCACGGTGCAGCATCACTGAACTGCTTCAGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGACCTTGACCTCCACATaGTCAGGCTCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLTLTST*SGSELK
Trigger: TTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAGGT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACCTTGACCTCCACATaGTCAGGCTCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITLTST*SGSELK
Trigger: TTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAGGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIRDFLP*PPHDQA
Trigger: AGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGTGGCACACTTAGGCTaGGATTCTCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTVAHLG*DSLGPE
Trigger: TTCTGGCCCAAGAGAATCTCAGCCTAAGTGTGCCAC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGTGGCACACTTAGGCTaGGATTCTCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLVAHLG*DSLGPE
Trigger: TTCTGGCCCAAGAGAATCTCAGCCTAAGTGTGCCAC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTGGCTTTGCCGGGATaGGCAAAGAGCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLALPG*AKSKGL
Trigger: GAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAACAAGCTGGGTTTGCTaGCCTTTAACCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPATSWVC*PLTSGK
Trigger: CTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGT...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGCTTTTGATGAAGGCTaGTTAAATGTTCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQAFDEG*LNVLLE
Trigger: TTCCAAGAGAACATTTAATCAGCCTTCATCAAAAGC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGHRSGW*GSWPRS
Trigger: ACTTCTTGGCCAACTACCTCACCACCCACTTCTATG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIHRSGW*GSWPRS
Trigger: ACTTCTTGGCCAACTACCTCACCACCCACTTCTATG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGGCACATCTACCTTGCTaGTGTAGCTGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMAHLPC*CSCHKE
Trigger: CTCTTTGTGACAGCTACATCAGCAAGGTAGATGTGC...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCACATCTACCTTGCTaGTGTAGCTGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSAHLPC*CSCHKE
Trigger: CTCTTTGTGACAGCTACATCAGCAAGGTAGATGTGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTGCTTCAGACAGCGACTaGACTTCTCCCGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSASDSD*TSPVQQ
Trigger: CTGCTGCACGGGAGAAGTTCAGTCGCTGTCTGAAGC...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCATGATTCAGCTGATTaGGGTCAAATGGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEHDSAD*GQMGAS
Trigger: TGAAGCCCCCATTTGACCTCAATCAGCTGAATCATG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCATGATTCAGCTGATTaGGGTCAAATGGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSHDSAD*GQMGAS
Trigger: TGAAGCCCCCATTTGACCTCAATCAGCTGAATCATG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGATCCTGCACCAGCCTTaGGCCATGATTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQILHQP*AMIQLI
Trigger: AATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGAT...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAATCCTGCACCAGCCTTaGGCCATGATTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGILHQP*AMIQLI
Trigger: AATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGAT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CGGGTTGTATGGAACTATTGTGGGGAGCAAGGGATAAAGGTGACTAGGCAAGCCGAGGACTCTCCTTGTTaGGAAGGTGCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RVVWNYCGEQGIKVTRQAEDSPC*EGAEEL
Trigger: AAGCTCTTCTGCACCTTCTCAACAAGGAGAGTCCTC...GGCTTGCCTAGTCACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGAGGACTCTCCTTGTTaGGAAGGTGCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLEDSPC*EGAEEL
Trigger: AAGCTCTTCTGCACCTTCTCAACAAGGAGAGTCCTC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGAGGACTCTCCTTGTTaGGAAGGTGCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIEDSPC*EGAEEL
Trigger: AAGCTCTTCTGCACCTTCTCAACAAGGAGAGTCCTC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTACTTCCATCTGCAGCTaGAGTGTGTTCATGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLTSICS*SVFMCL
Trigger: AAGGCACATGAACACACTTCAGCTGCAGATGGAAGT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCCTAGGGCTCTCTGAGAGAACTTCCATCTGCAGCTaGAGTGTGTTCATGTGCCTT +
Preference number: 4 (lower is better)
Translates to: SPPKDGGEVRDFLGLSERTSICS*SVFMCL
Trigger: AAGGCACATGAACACACTTCAGCTGCAGATGGAAGT...TCTCTCAGAGAGCCCTAGGAAATCCCTCACCTCACCTCCATCTTTGGGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGATTTGGCTGCCATGCCTaGCTCACTGACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRFGCHA*LTDTFE
Trigger: CTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAA...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTACGCTTCCAGGCAGTTaGGGAGGATGGTGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFTLPGS*GGWCPR
Trigger: ACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAAGGGCTGTGGCCCGTaGGTGTTCTTGCTTCACAGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTKGCGP*VFLLHS
Trigger: GCTGTGAAGCAAGAACACTCACGGGCCACAGCCCTT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCAGATGCCTGCACCTaGAAACCCTTCTATTCAGAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSDACT*KPFYSD
Trigger: GTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGATGGGACCAATAGGCTaGGCTCTGGCCAGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRMGPIG*ALASER
Trigger: CCTCTCACTGGCCAGAGCTCAGCCTATTGGTCCCAT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAATGGGACCAATAGGCTaGGCTCTGGCCAGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEMGPIG*ALASER
Trigger: CCTCTCACTGGCCAGAGCTCAGCCTATTGGTCCCAT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAGGTACACATGCCTGTaGCAGCTCCCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDRYTCL*QLPFSP
Trigger: AGGGGAGAATGGGAGCTGGCACAGGCATGTGTACCT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCCTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFLQSPQ*LSNEVH
Trigger: GTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAG...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDTESGP*KARNAF
Trigger: AAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCNPKWF*GATQSP
Trigger: CGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGTCCTCACACAGGAGATaGAACTCAACCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQSSHRR*NSTPSG
Trigger: ACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGA...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGGACTCCCCTCGGTCCTaGAGGCCTCTAGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWDSPRS*RPLVVP
Trigger: AGGAACTACTAGAGGCCTGCAGGACCGAGGGGAGTC...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTACTGCATCAGGCTCTTaGTGGGGGTCCTTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCTASGS*WGSLAG
Trigger: GCCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLLPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FLALVVTTLNGPAAGSEALISSS*SWRSLR
Trigger: CCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRRCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGERCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCGATGCAGGCGGCTCTaGAGTCCATCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTRCRRL*SPSLLP
Trigger: AGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTGGCACTGGGAGTGCTGGTGTGAGTTTACACAGAGGGCATAGATGGCATACTTATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 4 (lower is better)
Translates to: PGTGSAGVSLHRGHRWHTYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...AGTATGCCATCTATGCCCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGCCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSLLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTCCACTAGAGCCGTaGTTATCCAAAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCAPLEP*LSKSPP
Trigger: AGGAGGACTTTTGGATAAGCACGGCTCTAGTGGAGC...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGCTCCACTAGAGCCGTaGTTATCCAAAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGAPLEP*LSKSPP
Trigger: AGGAGGACTTTTGGATAAGCACGGCTCTAGTGGAGC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCCTGGAAAACCTCGAATaGCATCAGCATTTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: KFPRRMQDASSDSGGENILENLE*HQHLGV
Trigger: TACTCCTAAATGCTGATGGCATTCGAGGTTTTCCAG...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSAFWAA*STREDS
Trigger: ACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGC...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRAFWAA*STREDS
Trigger: ACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEWSFLG*LLHQGR
Trigger: TCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRWSFLG*LLHQGR
Trigger: TCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGACTTTGAAGGAGAACTaGAGCAAGGGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLETLKEN*SKGAAV
Trigger: TACTGCAGCACCCTTGCTGCAGTTCTCCTTCAAAGT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTTGGGCCAGAAGGGCTaGCAGTCTCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLGQKG*QSLWGN
Trigger: GTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTTGGGCCAGAAGGGCTaGCAGTCTCTCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLGQKG*QSLWGN
Trigger: GTTCCCCCAGAGAGACTGGCAGCCCTTCTGGCCCAA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAGGAGGGAGGAGGTCTaGTGGCTTTGCCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFRREEV*WLCRDE
Trigger: CTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGCACAGCTCAGGACTaGATCCTTTATGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSTAQD*ILYAAQ
Trigger: TTGAGCAGCATAAAGGATGCAGTCCTGAGCTGTGCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: FLALVVTTLNGPAAGSEAQPCLK*SRPESP
Trigger: TGGAGATTCTGGCCTACTGCATTTCAGACACGGCTG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLQPCLK*SRPESP
Trigger: TGGAGATTCTGGCCTACTGCATTTCAGACACGGCTG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCAGCTCCTCAAGGTCTaGCAGTCACACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTQLLKV*QSHHTG
Trigger: CCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACAGCTCCTCAAGGTCTaGCAGTCACACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEQLLKV*QSHHTG
Trigger: CCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTAGCTGCTGGAGAGTCTaGACAGCCACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLSCWRV*TATVAQ
Trigger: TTGGGCCACTGTGGCTGTGCAGACTCTCCAGCAGCT...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGTGTCCAACCAGCAGCTaGTGGAGAGTCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWCPTSS*WRVCTA
Trigger: GGCTGTGCAGACTCTCCAGCAGCTGCTGGTTGGACA...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGAGCAGGGTTCTCTCTaGAGCCTTCAACCACCATTT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIEQGSL*SLQPPF
Trigger: AAATGGTGGTTGAAGGCTGCAGAGAGAACCCTGCTC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGATTCAGGATGGCAATaGACAAGGAGGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEDSGWQ*TRRRWG
Trigger: CCCCCAGCGCCTCCTTGTGCATTGCCATCCTGAATC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGATTCAGGATGGCAATaGACAAGGAGGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRDSGWQ*TRRRWG
Trigger: CCCCCAGCGCCTCCTTGTGCATTGCCATCCTGAATC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCGCAATGCTGTCCCGGTaGAGATTCAGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIAMLSR*RFRMAM
Trigger: CATTGCCATCCTGAATCTGCACCGGGACAGCATTGC...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGCAATGCTGTCCCGGTaGAGATTCAGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLAMLSR*RFRMAM
Trigger: CATTGCCATCCTGAATCTGCACCGGGACAGCATTGC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLGDHRQ*CPGADS
Trigger: TGAATCTGCACCGGGACAGCATTGCCTGTGGTCACC...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVAMPQA*HAPVVS
Trigger: TGATACCACCGGGGCGTGGCATGCTTGGGGCATGGC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRTELLP*SSEVPG
Trigger: GCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLPFRNH*QRKALR
Trigger: ACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCTTCCTTCCAGAGCTaGGGGATGTTTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSSFQS*GMFLGG
Trigger: ACCTCCAAGAAACATCCCGCAGCTCTGGAAGGAAGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGTCATCATTGTGTATTaGCTGGATCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGVIIVY*LDQALQ
Trigger: CTGGAGGGCCTGATCCAGGCAATACACAATGATGAC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCAGGCAGAACGCAGTTTaGAACATATCAGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIRQNAV*NISGRP
Trigger: GGGCCTACCTGATATGTTGCAAACTGCGTTCTGCCT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGCGGCCTGCTGCACCTaGTGGACAAGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLAACCT*WTRAVA
Trigger: GGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCTACTGCATCCCCGCTaGTCTTGGCGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVLLHPR*SWRPAA
Trigger: TGCAGCAGGCCGCCAAGAGCAGCGGGGATGCAGTAG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGTTCCTGGCCCCACTaGCCAAGGTCACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGECSWPH*PRSLPG
Trigger: TCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCACTATCCGATTCTGCTaGATGTTTTGGCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQATIRFC*MFWQKE
Trigger: TTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGT...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACATCTCAGCAGATTTaGACACACCACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTSQQI*THHQCL
Trigger: CAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACATCTCAGCAGATTTaGACACACCACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETTSQQI*THHQCL
Trigger: CAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGT...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTACATCTCAGCAGATTTaGACACACCACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCATSQQI*THHQCL
Trigger: CAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGT...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDFPSGT*PTAPCV
Trigger: AACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGFPSGT*PTAPCV
Trigger: AACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAA...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAGGGCCTGTGCTGGCTaGGGAGACTGCCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVRACAG*GDCLRR
Trigger: TCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGCAGGGCTCCATAGATaGCATCGACTACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCAGLHR*HRLPQG
Trigger: CCCCTGGGGTAGTCGATGCCATCTATGGAGCCCTGC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGCAACTCAACCCCAAGTaGTTCTGCGGGGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILQLNPK*FCGATQ
Trigger: CTGCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTG...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDRLGWD*RTGLAL
Trigger: CAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGAGCTCATCACAGCCTaGGCCCTGGGTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVELITA*ALGPVQ
Trigger: CTGCACAGGACCCAGGGCCCAGGCTGTGATGAGCTC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCAACAGATCTCTCTTTaGTATGGGGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEQQISL*YGVAAL
Trigger: CAGAGCAGCAACCCCATACCAAAGAGAGATCTGTTG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTCAACAGATCTCTCTTTaGTATGGGGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCAQQISL*YGVAAL
Trigger: CAGAGCAGCAACCCCATACCAAAGAGAGATCTGTTG...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGCATCAGGCTCTTGCTaGGGGTCCTTGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCASGSC*GSLAGT
Trigger: AGTGCCAGCCAAGGACCCCCAGCAAGAGCCTGATGC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCARWHTS*HRSPGR
Trigger: TCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCACAGAGGGCATAGATaGCATACTTCATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHHRGHR*HTSWHR
Trigger: TCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCTTGCAGTCCTGGCACTaGGAGTGCTGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSLQSWH*ECWCEF
Trigger: AAACTCACACCAGCACTCCCAGTGCCAGGACTGCAA...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLSSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNDPGGD*GDVWQA
Trigger: AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGTCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 4 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQSRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCCTGCAGCGCTGCCAATaGCCTGTAGAGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSLQRCQ*PVELSG
Trigger: GCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAG...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTGCAGCGCTGCCAATaGCCTGTAGAGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLQRCQ*PVELSG
Trigger: GCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCTGCAGCGCTGCCAATaGCCTGTAGAGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLQRCQ*PVELSG
Trigger: GCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTTGCTGAAGAACAACTaGAAAACCTCGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFLLKNN*KTSNAI
Trigger: GATGGCATTCGAGGTTTTCCAGTTGTTCTTCAGCAA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCTTGCTGAAGAACAACTaGAAAACCTCGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLLLKNN*KTSNAI
Trigger: GATGGCATTCGAGGTTTTCCAGTTGTTCTTCAGCAA...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCACAGTGGAGGAGTCCTaGGCTCTGGCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTTVEES*ALAALV
Trigger: CACTAGAGCTGCCAGAGCCCAGGACTCCTCCACTGT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTGGATCTGCACAGGGTaGGCCTCTGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQWICTG*ASASGA
Trigger: AGCTCCAGAGGCAGAGGCCCACCCTGTGCAGATCCA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTGGATCTGCACAGGGTaGGCCTCTGCCTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFWICTG*ASASGA
Trigger: AGCTCCAGAGGCAGAGGCCCACCCTGTGCAGATCCA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIRCDTS*EELCCS
Trigger: GCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGTACATCTAGGGCAATaGGAGAATGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGVHLGQ*ENVGPG
Trigger: TCCTGGGCCTACATTCTCCCATTGCCCTAGATGTAC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTCACTTCAAGGCACATaGTGGGGTCAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSLQGT*WGQGFF
Trigger: GAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGACAAGTGGGAATAGCTaGCCCGGTGCTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRTSGNS*PGAAQA
Trigger: TGCCTGAGCAGCACCGGGCCAGCTATTCCCACTTGT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCTGCACAGCCACAGTaGCCCAATCCACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSAQPQ*PNPPSC
Trigger: ACATGAAGGTGGATTGGGCCACTGTGGCTGTGCAGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTCTTTCTCTGCGTATCTaGAAAGCAGTGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCALSLRI*KAVSPP
Trigger: AGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAG...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTTCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFSSGTH*CLAGGV
Trigger: GACACCCCCTGCCAGGCACCAGTGGGTACCGGATGA...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCATCCGGTACCCACTaGTGCCTGGCAGGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSSGTH*CLAGGV
Trigger: GACACCCCCTGCCAGGCACCAGTGGGTACCGGATGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACCACCTCATCTGCTTTaGGGACTCTCACCACAAACG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTPPHLL*GLSPQT
Trigger: CGTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGGTGCAGATTCAGGATaGCAATGCACAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDGADSG*QCTRRR
Trigger: GCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCCAAGTCTTGGCTCTaGCCGGCTTTGACGAACATC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDAKSWL*PALTNI
Trigger: GATGTTCGTCAAAGCCGGCCAGAGCCAAGACTTGGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGGCCAAGTCTTGGCTCTaGCCGGCTTTGACGAACATC +
Preference number: 4 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLAKSWL*PALTNI
Trigger: GATGTTCGTCAAAGCCGGCCAGAGCCAAGACTTGGC...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGACAAAGAGCCAAGTCTTaGCTCTGGCCGGCTTTGACG +
Preference number: 4 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGQRAKS*LWPALT
Trigger: CGTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTG...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACCTGGTTACTGCAGCTaGCTGCAAGATCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGPGYCS*LQDLIQ
Trigger: TTGGATCAGATCTTGCAGCCAGCTGCAGTAACCAGG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCACAAGCCCAGTCTTTGTaGAGACCTCAACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAQAQSL*RPQRPV
Trigger: AACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTG...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACAAGCCCAGTCTTTGTaGAGACCTCAACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTQAQSL*RPQRPV
Trigger: AACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAAGCCCAGTCTTTGTaGAGACCTCAACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLQAQSL*RPQRPV
Trigger: AACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGQRASL*TLGTQP
Trigger: TGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACACCGAATACAGGTCATaGCGGCCCGAACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDTEYRS*RPELGP
Trigger: AGGACCAAGTTCGGGCCGCCATGACCTGTATTCGGT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATATTTCCAAACAGGGTTaGCAGAGGCAAAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDISKQG*QRQSGD
Trigger: ATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAAT...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AAAGATGGAGGTGAGGTGAGGGATTTCCTAGGGCTCTCTGAGAGAAGACATCAGCTCTGCAGTAGGTCATaGCAGCATCCAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KDGGEVRDFLGLSERRHQLCSRS*QHPAGS
Trigger: ACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAG...CTGATGTCTTCTCTCAGAGAGCCCTAGGAAATCCCTCACCTCACCTCCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCTCTGCAGTAGGTCATaGCAGCATCCAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLLCSRS*QHPAGS
Trigger: ACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCTGGACAAGGGCTGTaGCCCGTGAGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAGQGL*PVSVLA
Trigger: AGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTCACTTCCTGGAGCCTaGGCCATGGGCACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLSLPGA*AMGTPG
Trigger: CCCCGGGGTGCCCATGGCCCAGGCTCCAGGAAGTGA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGAAGTCCCACTCCACTaGAGGAAAGAGGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTEVPLH*RKEVEG
Trigger: GCCCTCCACCTCTTTCCTCCAGTGGAGTGGGACTTC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGTTGGGGATAAAGACTTaGGAAGGCAAAGACGCATGC +
Preference number: 4 (lower is better)
Translates to: LLPKATGSKGSPFSQTGTLGIKT*EGKDAC
Trigger: GCATGCGTCTTTGCCTTCCCAAGTCTTTATCCCCAA...CGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp CTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGATTGTTGGACATTGTTaGTCAAAGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLPKATGSKGSPFSQTGTIVGHC*SKCGVG
Trigger: CCCCACCCCACACTTTGACCAACAATGTCCAACAAT...CGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CAA 72 bp CCTTCACATGGCTTGGCATTGTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PSHGLALYKQGS*GLPGNPVLTSF
Trigger: AAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATACAATGCCAAGCCATGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 72 bp TACCTTGCTGATGTAGCTGTCACAAAGAGCCAAGTCTaGGCTCTGGCCGGCTTTGACGAACATCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: YLADVAVTKSQV*ALAGFDEHHLG
Trigger: GCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTGTGACAGCTACATCAGCAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 72 bp TACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCACCTGGGGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: YCTDTVDTWPGK*RRDLQHLGRRE
Trigger: CTCTCTCCTCCCCAGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTGTCCCTCCTGTAGCTaGGGTACACATGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFCPSCS*GTHACA
Trigger: GGCACAGGCATGTGTACCTCAGCTACAGGAGGGACA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCACACCACCAATGCCTaGAGTATGTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLHTTNA*SMSSTL
Trigger: GAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGETQATL*GLMSCP
Trigger: TGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWTQATL*GLMSCP
Trigger: TGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGT...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCRQLRS*DEESSS
Trigger: AGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCFCRGQ*QRPVPS
Trigger: TGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTCGGTGGCTTTTCTGTaGCCTTCTCTGCATAGGTAT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLISVAFL*PSLHRY
Trigger: ATACCTATGCAGAGAAGGTCACAGAAAAGCCACCGA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGAGGGCTGCGGCTACTaGTCTCATCCAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEEGCGY*SHPVAL
Trigger: AAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGRTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLNVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTTCCAGAGCTGGCACTaGGAGCAAGCTAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLFQSWH*EQARSN
Trigger: ATTTGACCTAGCTTGCTCTCAGTGCCAGCTCTGGAA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACTGGGCCAGCACATCTaGAGCAGTTCAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELGQHI*SSSVML
Trigger: CAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTGGGCCAGCACATCTaGAGCAGTTCAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLGQHI*SSSVML
Trigger: CAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCTGGGCCAGCACATCTaGAGCAGTTCAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLGQHI*SSSVML
Trigger: CAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTTCTTCTGGAGGAGCTaGGTCTGGATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTFFWRS*VWICTG
Trigger: CCCTGTGCAGATCCAGACTCAGCTCCTCCAGAAGAA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTRDFLP*PPHDQA
Trigger: AGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTACACTTCAGTGAGCTaGAGGGCCCGGGACCAATCT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRYTSVS*RARDQS
Trigger: AGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIVSGKQ*VHLVHS
Trigger: ACTATGGACGAGGTGGACTCACTGCTTTCCAGATAC...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGGGCACAAATTCCTGTaGGGGCTGGGTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQGHKFL*GLGWWE
Trigger: TTCCCACCAACCCAGCCCTCACAGGAATTTGTGCCC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGECSISW*PQAMLS
Trigger: GGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCACCTCTGGGTTGGTaGGGCCCTTGGAGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPPLGW*GPWRAC
Trigger: GCAGGCTCTCCAAGGGCCTCACCAACCCAGAGGTGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGCACATCTACCTTGCTaGTGTAGCTGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGAHLPC*CSCHKE
Trigger: CTCTTTGTGACAGCTACATCAGCAAGGTAGATGTGC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGCTGGCTGCAAGATCTaGTCCAAAGATGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTAGCKI*SKDGTW
Trigger: CCACGTGCCATCTTTGGATCAGATCTTGCAGCCAGC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCTGGCTGCAAGATCTaGTCCAAAGATGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAGCKI*SKDGTW
Trigger: CCACGTGCCATCTTTGGATCAGATCTTGCAGCCAGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACATGATTCAGCTGATTaGGGTCAAATGGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGHDSAD*GQMGAS
Trigger: TGAAGCCCCCATTTGACCTCAATCAGCTGAATCATG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCATGATTCAGCTGATTaGGGTCAAATGGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLHDSAD*GQMGAS
Trigger: TGAAGCCCCCATTTGACCTCAATCAGCTGAATCATG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTTCCCAGTTCTGTATATaGCTTTGCTTTGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFSQFCI*LCFVTE
Trigger: TTCAGTCACAAAGCAAAGTCATATACAGAACTGGGA...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCACAGTCATCTTCTTTCTaGAGAATGTGGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IILALNSSCFMMSVSSPAQSSSF*RMWFSS
Trigger: GGAAGAAAACCACATTCTTCAGAAAGAAGATGACTG...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGTGTGTTCATGTGCCTTaGCACATCAGCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLCVHVP*HISCSH
Trigger: ATGACTGCAGCTGATGTGTCAAGGCACATGAACACA...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp ACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACTGTGTTCATGTGCCTTaGCACATCAGCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: TGTPPKGNGKQRFTIFPNCVHVP*HISCSH
Trigger: ATGACTGCAGCTGATGTGTCAAGGCACATGAACACA...GTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGCAGAGGCAAAGTGGTaGTTTGAGAGGTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRAEAKW*FERSQH
Trigger: GTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCTCACTCACTCACTCTaGGGTAGAAAGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLLTHSL*GRKNWP
Trigger: TGGCCAGTTCTTTCTACCTCAGAGTGAGTGAGTGAG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCCCCAAAGCCATCTCTaGATTTTGGAATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIPQSHL*ILEWEG
Trigger: TCCTTCCCATTCCAAAATTCAGAGATGGCTTTGGGG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAATCCACAGGGTTTCTaGGCACCAGAGACACTGACT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTNPQGF*APETLT
Trigger: AGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACTTTTCACACTCACTaGATAACAGTTGTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLTFHTH*ITVVQS
Trigger: ACTCTGCACAACTGTTATTCAGTGAGTGTGAAAAGT...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCGTGACTAGGCAAGCCTaGGACACAATTCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: WEPQSISPPKDGGEVRDFVTRQA*DTIHWH
Trigger: ATGCCAATGAATTGTGTCTCAGGCTTGCCTAGTCAC...GAAATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp AGAGATACCTGCTTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGAGTTCTTTGGCCCCTaGGGAGAGGTTCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: RDTCLLWEPQSISPPKDGEFFGP*GEVHSG
Trigger: TCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTC...TCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAAGCAGGTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGGACACACCACCAATaGCTGAAGTATGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHWTHHQ*LKYVFY
Trigger: GTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGGACACACCACCAATaGCTGAAGTATGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLWTHHQ*LKYVFY
Trigger: GTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCCTCACACAGGAGATaGAACTCAACCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSSHRR*NSTPSG
Trigger: ACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTTCTGTGACCTTCTCTaGATAGGTATGGCCATACAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSFCDLL*IGMAIQ
Trigger: CTGTATGGCCATACCTATGCAGAGAAGGTCACAGAA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTGACTGGAGCATCAACTaGATCAGGCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSDWSIN*IRLLLG
Trigger: CCCCAGCAAGAGCCTGATGCAGTTGATGCTCCAGTC...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGAGAGTCAGGAATACTaGACAGATACTGTTGACACC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLESQEY*TDTVDT
Trigger: GGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGGAGAGTCAGGAATACTaGACAGATACTGTTGACACC +
Preference number: 4 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMESQEY*TDTVDT
Trigger: GGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEAEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCACCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCACCTGATGGGCTTCTaGGAAGTTCCCGCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRHLMGF*EVPAKD
Trigger: ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCACTCCCGGGCTACCTaGTCTGCAGCCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNHSRAT*SAARGT
Trigger: GGTGCCTCTGGCTGCAGAGCAGGTAGCCCGGGAGTG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTTCACTGCCAGACTCTaGCCCTGCTGCAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTFTARL*PCCKDP
Trigger: AGGGTCTTTGCAGCAGGGGCAGAGTCTGGCAGTGAA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAACCACAGAGATTCACTaGCAGACTCTGCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGETTEIH*QTLPLL
Trigger: CAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGACCACAGAGATTCACTaGCAGACTCTGCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRTTEIH*QTLPLL
Trigger: CAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTGCATCCTTTATGCTaGTCAAATCGTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELHPLC*SNRPHL
Trigger: GAGATGTGGACGATTTGAGCAGCATAAAGGATGCAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGGACTGCATCCTTTATaGTGCTCAAATCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLGLHPL*CSNRPH
Trigger: ATGTGGACGATTTGAGCAGCATAAAGGATGCAGTCC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACCTTCTTTGTCACATaGCACAGCACAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTFFVT*HSTAQD
Trigger: GTCCTGAGCTGTGCTGTGGCATGTGACAAAGAAGGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCAGCTCCTCAAGGTCTaGCAGTCACACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFQLLKV*QSHHTG
Trigger: CCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAATGTTCATAAGCAGCTaGTCCAGCATGAACAGGGGG +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAMFISS*SSMNRG
Trigger: CCCCCTGTTCATGCTGGAGCAGCTGCTTATGAACAT...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTAGCTGCTGGAGAGTCTaGACAGCCACAGTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSCWRV*TATVAQ
Trigger: TTGGGCCACTGTGGCTGTGCAGACTCTCCAGCAGCT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTGTCCAACCAGCAGCTaGTGGAGAGTCTGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFCPTSS*WRVCTA
Trigger: GGCTGTGCAGACTCTCCAGCAGCTGCTGGTTGGACA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGAGGGTCTCGGGATCTaGAGCCTGGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQREGLGI*SLVDNF
Trigger: GAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCCGGTACCCACTGGTaGCTGGCAGGGGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISGTHW*LAGGVA
Trigger: AGCGACACCCCCTGCCAGGCACCAGTGGGTACCGGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCAATGCTGTCCCGGTaGAGATTCAGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDAMLSR*RFRMAM
Trigger: CATTGCCATCCTGAATCTGCACCGGGACAGCATTGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTGCGCTGAACAGCAGCTaGTTCATGATGTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSALNSS*FMMSVS
Trigger: GCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGC...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGGCGCTGAACAGCAGCTaGTTCATGATGTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILALNSS*FMMSVS
Trigger: GCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGC...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGCGCTGAACAGCAGCTaGTTCATGATGTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTALNSS*FMMSVS
Trigger: GCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTACTGAACTTCTCCCGTaGAGCAGTGAGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCTELLP*SSEVPG
Trigger: GCCGGGAACCTCACTGCTGCACGGGAGAAGTTCAGT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGGGACGAGTTCTTTGGCCCCTGAGGAGAGGTTCATTCTGGAGACCGAGACATTGGTCCTTCATAAACTaGTGCAGCTCATACAGAATG +
Preference number: 4 (lower is better)
Translates to: QGRVLWPLRRGSFWRPRHWSFIN*CSSYRM
Trigger: CATTCTGTATGAGCTGCAGCAGTTTATGAAGGACCA...ATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTCTTCCTTCCAGAGCTaGGGGATGTTTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLSSFQS*GMFLGG
Trigger: ACCTCCAAGAAACATCCCGCAGCTCTGGAAGGAAGA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTACGGGAAACAGGTATTaGCAACCTTCTTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCATGNRY*QPSLSA
Trigger: AGCAGACAAAGAAGGTTGGCAATACCTGTTTCCCGT...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCTCGAGGATGTTCTCTaGAATGTCACCTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLLEDVL*NVTLEV
Trigger: GACCTCCAAGGTGACATTCCAGAGAACATCCTCGAG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTGCAGGGCTCCATAGATaGCATCGACTACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFAGLHR*HRLPQG
Trigger: CCCCTGGGGTAGTCGATGCCATCTATGGAGCCCTGC...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGCAGGGCTCCATAGATaGCATCGACTACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVAGLHR*HRLPQG
Trigger: CCCCTGGGGTAGTCGATGCCATCTATGGAGCCCTGC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCAACTCAACCCCAAGTaGTTCTGCGGGGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQQLNPK*FCGATQ
Trigger: CTGCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCAACTCAACCCCAAGTaGTTCTGCGGGGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCQLNPK*FCGATQ
Trigger: CTGCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTCACAGCCTGGGCCCTaGGTCCTGTGCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLSQPGP*VLCRVW
Trigger: CCAGACCCTGCACAGGACCCAGGGCCCAGGCTGTGA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTCAGGTGCTCAGGGACTaGAGCATCAACTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLQVLRD*SINCIR
Trigger: CCTGATGCAGTTGATGCTCCAGTCCCTGAGCACCTG...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AGTCAGGAATACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTTGAGAAGACAGGTGCTCAGGGACTaGAGCATCAACTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SQEYCTDTVDTWPGKLRRQVLRD*SINCIR
Trigger: CCTGATGCAGTTGATGCTCCAGTCCCTGAGCACCTG...TCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDTLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCATGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPACSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTCTGCAGCGCTGCCAATaGCCTGTAGAGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFLQRCQ*PVELSG
Trigger: GCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAG...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTAFRST*SIRRPR
Trigger: GCGGGGTCGACGGATAGACCACGTACTCCTAAATGC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAGTCCTCGCTTAGGCTaGGCCAGCACATCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSPRLG*ASTSEA
Trigger: TGCTTCAGATGTGCTGGCCCAGCCTAAGCGAGGACT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGAGAGGGTGGTGTGGCTaGCAACACAGTCCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQRGWCG*QHSPRL
Trigger: TAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCT...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAGAGGGTGGTGTGGCTaGCAACACAGTCCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRRGWCG*QHSPRL
Trigger: TAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTAGGGAGGAGGTCTGCTaGCTTTGCCGGGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCREEVC*LCRDEQ
Trigger: TTGCTCATCCCGGCAAAGCCAGCAGACCTCCTCCCT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGCTCGGTGTAGAAAGTaGGAGGTCATCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTARCRK*EVIQAV
Trigger: CACTGCCTGGATGACCTCCCACTTTCTACACCGAGC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGCCCGGGACCAATCTCTaGCCACCAAGGATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILPGTNL*PPRIPQ
Trigger: TTGAGGAATCCTTGGTGGCCAGAGATTGGTCCCGGG...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGCACTTTAGTCCTTCTTaGACAGCCGTGTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMHFSPS*TAVSEM
Trigger: CATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTG...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCACTTTAGTCCTTCTTaGACAGCCGTGTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHHFSPS*TAVSEM
Trigger: CATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCCAAGCTAGTGTGCTaGTCGAGGGATTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAKLVC*SRDCSV
Trigger: GACAGAGCAATCCCTCGACCAGCACACTAGCTTGGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGGGTCAGCAGAATCTTaGATCCCACATACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDGSAES*IPHTAP
Trigger: AGGCGCTGTATGTGGGATCCAAGATTCTGCTGACCC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGCACAAGGAGGCGCTaGGGGCCTGCTCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGECTRRR*GPAHSK
Trigger: TTTACTATGAGCAGGCCCCCAGCGCCTCCTTGTGCA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGCCAAGTCTTGGCTCTaGCCGGCTTTGACGAACATC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTAKSWL*PALTNI
Trigger: GATGTTCGTCAAAGCCGGCCAGAGCCAAGACTTGGC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACAAAGAGCCAAGTCTTaGCTCTGGCCGGCTTTGACG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEQRAKS*LWPALT
Trigger: CGTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACCTGGTTACTGCAGCTaGCTGCAAGATCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTPGYCS*LQDLIQ
Trigger: TTGGATCAGATCTTGCAGCCAGCTGCAGTAACCAGG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCGGCTTCCAAAAGCTaGTTCCTTAGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSASKS*FLSLVT
Trigger: AGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTCGGCTTCCAAAAGCTaGTTCCTTAGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSASKS*FLSLVT
Trigger: AGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACTGATTGAGGTCAAATaGGGGCTTCAGACAGCGACT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLIEVK*GLQTAT
Trigger: AGTCGCTGTCTGAAGCCCCCATTTGACCTCAATCAG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCA +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYQRASL*TLGTQP
Trigger: TGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCCAGTTCCCTCAGGGTaGCAAAGTAATCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: FLALVVTTLNGPAAGSEAPVPSG*QSNRHL
Trigger: AAGATGACGATTACTTTGCCACCCTGAGGGAACTGG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCAGTTCCCTCAGGGTaGCAAAGTAATCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPVPSG*QSNRHL
Trigger: AAGATGACGATTACTTTGCCACCCTGAGGGAACTGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACATGGCGGCCCGAACTTaGTCCTTCATAAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDMAART*SFINCC
Trigger: GCAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCAT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAACCGAATACAGGTCATaGCGGCCCGAACTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGETEYRS*RPELGP
Trigger: AGGACCAAGTTCGGGCCGCCATGACCTGTATTCGGT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGACCGATGCAAGAACCTaGTCACTTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLTDART*SLPSAA
Trigger: AGCTGCAGATGGAAGTGACCAGGTTCTTGCATCGGT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCATTTCCAAACAGGGTTaGCAGAGGCAAAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSISKQG*QRQSGD
Trigger: ATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAAT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCTCCAGCTCCTaGGGCGGAATTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQRPSSS*GGILLN
Trigger: GTTCAAGAGAATTCCGCCCCAGGAGCTGGAGGGCCT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCTGGACAAGGGCTGTaGCCCGTGAGTGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQAGQGL*PVSVLA
Trigger: AGCAAGAACACTCACGGGCCACAGCCCTTGTCCAGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGCCTGCTGCACCTGCTaGACAAGGGCTGTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNACCTC*TRAVAR
Trigger: ACGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFNFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGGGAGAAGAGACACCTaGAAAACAGGTTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHGRRDT*KTGLFH
Trigger: GTGGAATAAACCTGTTTTCCAGGTGTCTCTTCTCCC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAGGACTTCTTGTGCTTaGGAGAAGAGACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLRTSCA*EKRHLE
Trigger: TTCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTTGTCACATCTTGCGTaGGAAGACAAGACAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLSHLA*EDKTVH
Trigger: ATGCACTGTCTTGTCTTCCCACGCAAGATGTGACAA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATGAGATACGGGTTGTATaGAACTATTGTGGGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LWEPQSISPPKDGGEVRDEIRVV*NYCGEQ
Trigger: TTGCTCCCCACAATAGTTCCATACAACCCGTATCTC...ATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CAA 72 bp GACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGTTTGAACCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: DFPLTYLCSAHY*YFPGMGLNLCL
Trigger: GAGACAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
3UTR CAA 72 bp CTTGACCTCCACATGATCAGGCTCAGAGCTCAAACTTaGAAGGAGAACTGCAGCAAGGGTGCTGCAGTAACT +
Preference number: 4 (lower is better)
Translates to: LDLHMIRLRAQT*KENCSKGAAVT
Trigger: AGTTACTGCAGCACCCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
3UTR CAA 72 bp AGCAGCCTAGGACATGTTTGTCTTGGGGATAAAGACTaGGGAAGGCAAAGACGCATGCAGTCCATGTTCACC +
Preference number: 4 (lower is better)
Translates to: SSLGHVCLGDKD*GRQRRMQSMFT
Trigger: GGTGAACATGGACTGCATGCGTCTTTGCCTTCCCAAGTCTTTATCCCCAAGACAAACATGTCCTAGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CAA 72 bp CCTGAGGAGAGGTTCATTCTGGAGACCGAGACATTGTaGGACATTGTTGGTCAAAGTGTGGGGTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: PEERFILETETL*DIVGQSVGWGF
Trigger: AAATCCCCACCCCACACTTTGACCAACAATGTCCAACAATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTTGTCCCTCCTGTAGCTaGGGTACACATGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFCPSCS*GTHACA
Trigger: GGCACAGGCATGTGTACCTCAGCTACAGGAGGGACA...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTGTCCCTCCTGTAGCTaGGGTACACATGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVCPSCS*GTHACA
Trigger: GGCACAGGCATGTGTACCTCAGCTACAGGAGGGACA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCTQATL*GLMSCP
Trigger: TGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVFCRGQ*QRPVPS
Trigger: TGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGAGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGAMPFE*GPPVHS
Trigger: AGAATGCACTGGTGGACCTCATTCGAAAGGCATTGC...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSRSGSR*SGETFP
Trigger: GGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCG...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCATCACAGGCATCCCTaGGGAGCTCATCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVHHRHP*GAHHSL
Trigger: CAGGCTGTGATGAGCTCCTCAGGGATGCCTGTGATG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLGVLV*VYTEGI
Trigger: TATGCCCTCTGTGTAAACTCACACCAGCACTCCCAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCGCTGGCTCTGTAGCTaGGGCCAGGTCCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLRWLCS*GQVLRE
Trigger: CTCTCTGAGGACCTGGCCTCAGCTACAGAGCCAGCG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRNVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATTCCAGAGCTGGCACTaGGAGCAAGCTAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGFQSWH*EQARSN
Trigger: ATTTGACCTAGCTTGCTCTCAGTGCCAGCTCTGGAA...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGTTTGGTTTGACTGGCTaGCATAAGCAGATAATTGAG +
Preference number: 4 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQFGLTG*HKQIIE
Trigger: CTCAATTATCTGCTTATGTCAGCCAGTCAAACCAAA...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCTCTCTGATTTGGTTTaGCTGGCTGACATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLILSDLV*LADISR
Trigger: TCTGCTTATGTCAGCCAGTCAAACCAAATCAGAGAG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCAGAGCTCAAACTTTaGAGGAGAACTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSELKL*RRTAAR
Trigger: CCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDRDFLP*PPHDQA
Trigger: AGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAACAAGCTGGGTTTGCTaGCCTTTAACCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGETSWVC*PLTSGK
Trigger: CTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACACGAAGTTCCTTCCATaGCAAGCTGGGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDTKFLP*QAGFAD
Trigger: GTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTACACTTCAGTGAGCTaGAGGGCCCGGGACCAATCT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFYTSVS*RARDQS
Trigger: AGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTGGACAGCCGTGTCTaGAATGCAGTAGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLDSRV*NAVGQN
Trigger: ATTCTGGCCTACTGCATTTCAGACACGGCTGTCCAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGAAACCCAGAATCTTCTaGTACACCTGCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWKPRIF*YTCSSA
Trigger: GGCGGAGCTGCAGGTGTATCAGAAGATTCTGGGTTT...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTAGAATCATGTTCATaGCAGTTGATGGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELESCS*QLMGPQ
Trigger: TTGAGGACCCATCAACTGTCATGAACATGATTCTAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTAGAATCATGTTCATaGCAGTTGATGGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLESCS*QLMGPQ
Trigger: TTGAGGACCCATCAACTGTCATGAACATGATTCTAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGCATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLHRSGW*GSWPRS
Trigger: ACTTCTTGGCCAACTACCTCACCACCCACTTCTATG...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGGCACAAATTCCTGTaGGGGCTGGGTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGHKFL*GLGWWE
Trigger: TTCCCACCAACCCAGCCCTCACAGGAATTTGTGCCC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQCSISW*PQAMLS
Trigger: GGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGCACATCTACCTTGCTaGTGTAGCTGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTAHLPC*CSCHKE
Trigger: CTCTTTGTGACAGCTACATCAGCAAGGTAGATGTGC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACTTTGCTTTGTGACTaGAGAACCGAATACAGGTCA +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTLLCD*RTEYRS
Trigger: TGACCTGTATTCGGTTCTTCAGTCACAAAGCAAAGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGTGTTCATGTGCCTTaGCACATCAGCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTCVHVP*HISCSH
Trigger: ATGACTGCAGCTGATGTGTCAAGGCACATGAACACA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTTTTCCCTCCCAGCATaGCCTTGCAGGCAACATCCA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTFSLPA*PCRQHP
Trigger: TGGATGTTGCCTGCAAGGTCATGCTGGGAGGGAAAA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTTGGCTGCCATGCCTaGCTCACTGACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDFGCHA*LTDTFE
Trigger: CTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGENMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTTAGCCTCACAGACCTaGTCATTTATACACATACCC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLASQT*SFIHIP
Trigger: GGGTATGTGTATAAATGATCAGGTCTGTGAGGCTAA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAATTATTCCCTCATTCTaGCTCTGTCCAGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTIIPSF*LCPEAQ
Trigger: TTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAAT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTCCACCAACCAGATGTaGCCTATTCATTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSTNQM*PIHYSL
Trigger: GAGGGAATAATGAATAGGTCACATCTGGTTGGTGGA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCCAAAACTTCTCATCTaGCAGATGTCCATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHPKLLI*QMSMSC
Trigger: ACAACTCATGGACATCTGTCAGATGAGAAGTTTTGG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCCAAAACTTCTCATCTaGCAGATGTCCATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEPKLLI*QMSMSC
Trigger: ACAACTCATGGACATCTGTCAGATGAGAAGTTTTGG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CGGGTTGTATGGAACTATTGTGGGGAGCAAGGGATAAAGGTGACTAGGCAAGCCGGAAGATTTTTATTCTaGCTGGCACTCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RVVWNYCGEQGIKVTRQAGRFLF*LALLPK
Trigger: CTTTGGGAGGAGTGCCAGTCAGAATAAAAATCTTCC...GGCTTGCCTAGTCACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACATTTCCCAGCACAGAGTaGAGGGAGATACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SERWLLVTTLCLHWASETFPSTE*REIQRN
Trigger: ATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAA...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAAAAATCCAAAAAGCTaGTTCTGCGAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHKNPKS*FCEAAS
Trigger: GGAAGCTGCTTCGCAGAAGCAGCTTTTTGGATTTTT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTAAAAATCCAAAAAGCTaGTTCTGCGAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEAKNPKS*FCEAAS
Trigger: GGAAGCTGCTTCGCAGAAGCAGCTTTTTGGATTTTT...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTACACATGCCTGTaGCAGCTCCCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQRYTCL*QLPFSP
Trigger: AGGGGAGAATGGGAGCTGGCACAGGCATGTGTACCT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAATGAGGTCCACCAGTaGATTCTGCAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGENEVHQ*ILQRPV
Trigger: CACTGGCCTCTGCAGAATGCACTGGTGGACCTCATT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGAATGAGGTCCACCAGTaGATTCTGCAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILNEVHQ*ILQRPV
Trigger: CACTGGCCTCTGCAGAATGCACTGGTGGACCTCATT...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGACTCCCCTCGGTCCTaGAGGCCTCTAGTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVDSPRS*RPLVVP
Trigger: AGGAACTACTAGAGGCCTGCAGGACCGAGGGGAGTC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTTTCTGTGACCTTCTCTaGATAGGTATGGCCATACAG +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCFCDLL*IGMAIQ
Trigger: CTGTATGGCCATACCTATGCAGAGAAGGTCACAGAA...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTGCTGCTCTGCTGTATaGACCACTCCAGGACCTCCA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCCCSAV*TTPGPP
Trigger: TGGAGGTCCTGGAGTGGTGCATACAGCAGAGCAGCA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTATGGGGTTGCTGCTCTaGTGTATGCACCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCMGLLL*CMHHSR
Trigger: CCTGGAGTGGTGCATACAGCAGAGCAGCAACCCCAT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGATGGGGTTGCTGCTCTaGTGTATGCACCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQMGLLL*CMHHSR
Trigger: CCTGGAGTGGTGCATACAGCAGAGCAGCAACCCCAT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGACTGGAGCATCAACTaGATCAGGCTCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFDWSIN*IRLLLG
Trigger: CCCCAGCAAGAGCCTGATGCAGTTGATGCTCCAGTC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCCTGGCACTGGGAGTaGTGGTGTGAGTTTACACAG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESWHWE*WCEFTQ
Trigger: CTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGAGAGTCAGGAATACTaGACAGATACTGTTGACACC +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCESQEY*TDTVDT
Trigger: GGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSITVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGGGTGCAATCTACTGTaGAGCTCATTCCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQGCNLL*SSFRPD
Trigger: GTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGCAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGAGTTGAGCGGCCACTaGCAGTTCTCCGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVELSGH*QFSEWC
Trigger: GCACCATTCGGAGAACTGGCAGTGGCCGCTCAACTC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTGGAAAACCTCGAATaGCATCAGCATTTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLENLE*HQHLGV
Trigger: TACTCCTAAATGCTGATGGCATTCGAGGTTTTCCAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCTGGAAAACCTCGAATaGCATCAGCATTTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLENLE*HQHLGV
Trigger: TACTCCTAAATGCTGATGGCATTCGAGGTTTTCCAG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGAGTAGTCCATCTGCCTaGTGCCTGATGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILSSPSA*CLMGSV
Trigger: AACAGACCCCATCAGGCAGCAGGCAGATGGACTACT...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAGTAGTCCATCTGCCTaGTGCCTGATGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSSPSA*CLMGSV
Trigger: AACAGACCCCATCAGGCAGCAGGCAGATGGACTACT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAACTTTGAAGGAGAACTaGAGCAAGGGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPATLKEN*SKGAAV
Trigger: TACTGCAGCACCCTTGCTGCAGTTCTCCTTCAAAGT...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACTTTGAAGGAGAACTaGAGCAAGGGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTLKEN*SKGAAV
Trigger: TACTGCAGCACCCTTGCTGCAGTTCTCCTTCAAAGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCCAGAGGCACCTCCCTaGGGCCACGAAGTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLPEAPP*GHEVPS
Trigger: GGAAGGAACTTCGTGGCCGCAGGGAGGTGCCTCTGG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACACTCCCGGGCTACCTaGTCTGCAGCCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLHSRAT*SAARGT
Trigger: GGTGCCTCTGGCTGCAGAGCAGGTAGCCCGGGAGTG...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACAGACTCTGCCCCTGCTaGAAAGACCCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNRLCPC*KDPRRG
Trigger: GCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCCAGACTCTGCCCCTaGTGCAAAGACCCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIARLCP*CKDPRR
Trigger: CCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCTTCACTGCCAGACTCTaGCCCTGCTGCAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGFTARL*PCCKDP
Trigger: AGGGTCTTTGCAGCAGGGGCAGAGTCTGGCAGTGAA...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCTGCATCCTTTATGCTaGTCAAATCGTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLLHPLC*SNRPHL
Trigger: GAGATGTGGACGATTTGAGCAGCATAAAGGATGCAG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGGACTGCATCCTTTATaGTGCTCAAATCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIGLHPL*CSNRPH
Trigger: ATGTGGACGATTTGAGCAGCATAAAGGATGCAGTCC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGCACAGCTCAGGACTaGATCCTTTATGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSTAQD*ILYAAQ
Trigger: TTGAGCAGCATAAAGGATGCAGTCCTGAGCTGTGCT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGTGCTGGTCGAGGGATTaGTCTGTCACTTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQCWSRD*SVTSRH
Trigger: GTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCA...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCAATGCTGTCCCGGTaGAGATTCAGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAMLSR*RFRMAM
Trigger: CATTGCCATCCTGAATCTGCACCGGGACAGCATTGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGGDHRQ*CPGADS
Trigger: TGAATCTGCACCGGGACAGCATTGCCTGTGGTCACC...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQGDHRQ*CPGADS
Trigger: TGAATCTGCACCGGGACAGCATTGCCTGTGGTCACC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCGCTGAACAGCAGCTaGTTCATGATGTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQALNSS*FMMSVS
Trigger: GCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGCCATGCCCCAAGCATaGCACGCCCCGGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLAMPQA*HAPVVS
Trigger: TGATACCACCGGGGCGTGGCATGCTTGGGGCATGGC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLPFRNH*QRKALR
Trigger: ACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGG...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTCCTTCATAAACTGCTaGAGCTCATACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLSFINC*SSYRMW
Trigger: CCACATTCTGTATGAGCTGCAGCAGTTTATGAAGGA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGGTCCTTCATAAACTaGTGCAGCTCATACAGAATG +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHWSFIN*CSSYRM
Trigger: CATTCTGTATGAGCTGCAGCAGTTTATGAAGGACCA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTCTTCCTTCCAGAGCTaGGGGATGTTTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: FYSDWHSSQRQREAKVHHSSFQS*GMFLGG
Trigger: ACCTCCAAGAAACATCCCGCAGCTCTGGAAGGAAGA...ATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGGCACTTTCGCACCGATaGAAGAACCTGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQALSHR*KNLVTS
Trigger: GGAAGTGACCAGGTTCTTGCATCGGTGCGAAAGTGC...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGACACATTTGAGCAGTTaGTGGATCTCACTGTACTTC +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLETHLSS*WISLYF
Trigger: GAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTACACATTTGAGCAGTTaGTGGATCTCACTGTACTTC +
Preference number: 4 (lower is better)
Translates to: GSSPQCHHPQHSPQASEATHLSS*WISLYF
Trigger: GAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGT...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATACACATTTGAGCAGTTaGTGGATCTCACTGTACTTC +
Preference number: 4 (lower is better)
Translates to: LWEPQSISPPKDGGEVRDTHLSS*WISLYF
Trigger: GAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGT...ATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACACATTTGAGCAGTTaGTGGATCTCACTGTACTTC +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTHLSS*WISLYF
Trigger: GAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTGCTCTTGGCGGCCTaGTGCACCTGCTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLLLAA*CTCWTR
Trigger: CCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGATGTCTTGCACTACTaGATCCCCGCTGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFDVLHY*IPAALG
Trigger: GCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGATGTCTTGCACTACTaGATCCCCGCTGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQDVLHY*IPAALG
Trigger: GCCAAGAGCAGCGGGGATGCAGTAGTGCAAGACATC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTGTTCCTGGCCCCACTaGCCAAGGTCACTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVCSWPH*PRSLPG
Trigger: TCCAGGAAGTGACCTTGGGCAGTGGGGCCAGGAACA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTCCAGGACTTCTTGTaGTTGGGAGAAGAGACACCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLQDFL*LGEETP
Trigger: AGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTGAAGGCAAAGACGCATaGAGTCCATGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: FILTGTPPKGNGKQRFTIEGKDA*SPCSPA
Trigger: AGCAGGTGAACATGGACTGCATGCGTCTTTGCCTTC...AATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQFPSGT*PTAPCV
Trigger: AACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGGGCCTGTGCTGGCTaGGGAGACTGCCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIRACAG*GDCLRR
Trigger: TCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAACTCAACCCCAAGTaGTTCTGCGGGGCAACGCAG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVQLNPK*FCGATQ
Trigger: CTGCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCRLGWD*RTGLAL
Trigger: CAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAACAGATCTCTCTTTaGTATGGGGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLQQISL*YGVAAL
Trigger: CAGAGCAGCAACCCCATACCAAAGAGAGATCTGTTG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLRWHTS*HRSPGR
Trigger: TCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTRWHTS*HRSPGR
Trigger: TCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTGGCACTGGGAGTGCTaGTGTGAGTTTACACAGAGG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRWHWEC*CEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGGCACTGGGAGTGCTaGTGTGAGTTTACACAGAGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEWHWEC*CEFTQR
Trigger: CCTCTGTGTAAACTCACACCAGCACTCCCAGTGCCA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTTGCAGTCCTGGCACTaGGAGTGCTGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLQSWH*ECWCEF
Trigger: AAACTCACACCAGCACTCCCAGTGCCAGGACTGCAA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTGCTGTTAGACTGGGGTGACGTGTaGCAGGCTGGTATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: VGSQDLGSLLLSTMLVLLDWGDV*QAGIFG
Trigger: CCCGAAGATACCAGCCTGCCACACGTCACCCCAGTC...TAACAGCACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGCATTTAGGAGTACGTaGTCTATCCGTCGACCCCGC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCAFRST*SIRRPR
Trigger: GCGGGGTCGACGGATAGACCACGTACTCCTAAATGC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGTCCTCGCTTAGGCTaGGCCAGCACATCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSPRLG*ASTSEA
Trigger: TGCTTCAGATGTGCTGGCCCAGCCTAAGCGAGGACT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGAGGGTGGTGTGGCTaGCAACACAGTCCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQRGWCG*QHSPRL
Trigger: TAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGGCTGCCAGTCTCTCTaGGGGAACTTGTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRGCQSL*GNLSLK
Trigger: TTTGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGCTCGGTGTAGAAAGTaGGAGGTCATCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCARCRK*EVIQAV
Trigger: CACTGCCTGGATGACCTCCCACTTTCTACACCGAGC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGCTCGGTGTAGAAAGTaGGAGGTCATCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFARCRK*EVIQAV
Trigger: CACTGCCTGGATGACCTCCCACTTTCTACACCGAGC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGTACATCTAGGGCAATaGGAGAATGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDVHLGQ*ENVGPG
Trigger: TCCTGGGCCTACATTCTCCCATTGCCCTAGATGTAC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACACTTTAGTCCTTCTTaGACAGCCGTGTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGHFSPS*TAVSEM
Trigger: CATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTCTTCAAGGCACATGGTaGGGTCAGGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSLQGTW*GQGFFA
Trigger: TGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAG...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGCTTCAAGGCACATGGTaGGGTCAGGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILLQGTW*GQGFFA
Trigger: TGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAG...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTCAAGGCACATGGTaGGGTCAGGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLQGTW*GQGFFA
Trigger: TGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCGCCAAGCTAGTGTGCTaGTCGAGGGATTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGAKLVC*SRDCSV
Trigger: GACAGAGCAATCCCTCGACCAGCACACTAGCTTGGC...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCGGGATCTGCAGCCTaGTGGACAATTTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSGSAA*WTISWR
Trigger: CCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCGGGATCTGCAGCCTaGTGGACAATTTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESGSAA*WTISWR
Trigger: CCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTCCACCTCATCTGCTTTaGGGACTCTCACCACAAACG +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSPPHLL*GLSPQT
Trigger: CGTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGG...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTGCACAAGGAGGCGCTaGGGGCCTGCTCATAGTAAA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQCTRRR*GPAHSK
Trigger: TTTACTATGAGCAGGCCCCCAGCGCCTCCTTGTGCA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGGTGCAGATTCAGGATaGCAATGCACAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQGADSG*QCTRRR
Trigger: GCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCCCGGCATCCACCTCTaGGTTGGTGAGGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLPGIHL*VGEALG
Trigger: TCCAAGGGCCTCACCAACCCAGAGGTGGATGCCGGG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCCCGGCATCCACCTCTaGGTTGGTGAGGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIPGIHL*VGEALG
Trigger: TCCAAGGGCCTCACCAACCCAGAGGTGGATGCCGGG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACAAGCCCAGTCTTTGTaGAGACCTCAACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEQAQSL*RPQRPV
Trigger: AACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCCAAGGTTGGATCAATaGATTCTAGCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEPRLDQ*ILASSP
Trigger: TGGAGAACTTGCTAGAATCCATTGATCCAACCTTGG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGATGGCGGCCCGAACTTaGTCCTTCATAAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRMAART*SFINCC
Trigger: GCAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCAT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGATAAAGGTGACCGATGCAAGAACCTaGTCACTTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EAEIRVVWNYCGEQGIKVTDART*SLPSAA
Trigger: AGCTGCAGATGGAAGTGACCAGGTTCTTGCATCGGT...CACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGATGGCAGCATCCAGCTaGAAGTCCTGCAGAACACGG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQMAASS*KSCRTR
Trigger: CCGTGTTCTGCAGGACTTCCAGCTGGATGCTGCCAT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATAATACAGAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGAATGGCAGCATCCAGCTaGAAGTCCTGCAGAACACGG +
Preference number: 4 (lower is better)
Translates to: IIQKLRYGLYGTIVGSKGMAASS*KSCRTR
Trigger: CCGTGTTCTGCAGGACTTCCAGCTGGATGCTGCCAT...TCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTCTGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp CTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATCATTTGAGCAGTTGCTaGATCTCACTGTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LWEPQSISPPKDGGEVRDHLSSC*ISLYFS
Trigger: AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATG...ATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCATTTGAGCAGTTGCTaGATCTCACTGTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSHLSSC*ISLYFS
Trigger: AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCATTGTGTATTGCCTaGATCAGGCCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSLCIA*IRPSSS
Trigger: GGAGCTGGAGGGCCTGATCCAGGCAATACACAATGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCAGGCCACGTGTTCCTaGCCCCACTGCCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIQATCS*PHCPRS
Trigger: TGACCTTGGGCAGTGGGGCCAGGAACACGTGGCCTG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGGGTATCTGTTTTGGTaGTGTTTTTCTGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLGYLFW*CFSVGD
Trigger: GTCTCCAACAGAAAAACACCACCAAAACAGATACCC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATTCAACCCCTCAACATaGGTATCTGTTTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGFNPST*VSVLVV
Trigger: CACCACCAAAACAGATACCCATGTTGAGGGGTTGAA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTTCAACCCCTCAACATaGGTATCTGTTTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLFNPST*VSVLVV
Trigger: CACCACCAAAACAGATACCCATGTTGAGGGGTTGAA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCAGTAACAACTCTGAATaGACCAGCAGCTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSISNNSE*TSSWVR
Trigger: TCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACT...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCTTTCATCATCTATTTaGGGTTCAACTATAGGATTG +
Preference number: 4 (lower is better)
Translates to: TIPGQVGRRVEADSKQYALSSSI*GSTIGL
Trigger: CAATCCTATAGTTGAACCCCAAATAGATGATGAAAG...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CGGGTTGTATGGAACTATTGTGGGGAGCAAGGGATAAAGGTGACTAGGCAAGCCGATACCTGCTTACTCTaGGAACCTCAATCCATCAGT +
Preference number: 4 (lower is better)
Translates to: RVVWNYCGEQGIKVTRQADTCLL*EPQSIS
Trigger: ACTGATGGATTGAGGTTCCCAGAGTAAGCAGGTATC...GGCTTGCCTAGTCACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CAA 72 bp CTGGTTTTCAATCTTGTGCTCTACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCGCTCCATGAACATCAG +
Preference number: 4 (lower is better)
Translates to: LVFNLVLYLGQF*DHFLVALHEHQ
Trigger: CTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR TCA 90 bp GTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTGCTGTTATGTCCCTCCTGTAGCTaGGGTACACATGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: VGSQDLGSLLLSTMLVLLCPSCS*GTHACA
Trigger: GGCACAGGCATGTGTACCTCAGCTACAGGAGGGACA...TAACAGCACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTCTACTCTTTGAGGGTTaGTGTCCTGCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLLLFEG*CPAHIS
Trigger: TGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAG...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCGGTGGCTTTTCTGTaGCCTTCTCTGCATAGGTAT +
Preference number: 4 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGSVAFL*PSLHRY
Trigger: ATACCTATGCAGAGAAGGTCACAGAAAAGCCACCGA...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQRSGSR*SGETFP
Trigger: GGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCCAGGACCTCCAGGTaGGCCCACAACCCATCACAG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISRTSR*AHNPSQ
Trigger: CTGTGATGGGTTGTGGGCTCACCTGGAGGTCCTGGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTCTCCACCGTGTAAATaGTACAACAGATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSPPCK*YNRSLF
Trigger: AAAGAGAGATCTGTTGTATCATTTACACGGTGGAGA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTTCTCCACCGTGTAAATaGTACAACAGATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCASPPCK*YNRSLF
Trigger: AAAGAGAGATCTGTTGTATCATTTACACGGTGGAGA...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCGAGAGTGTAGAGCACTaGGTGGCTGTCTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSESVEH*VAVSTV
Trigger: CACGGTGGAGACAGCCACTCAGTGCTCTACACTCTC...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGGAACCCCGTTCTaGCTTCCTTTCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVQGTPF*LPFRMC
Trigger: GCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATTCCAGAGCTGGCACTaGGAGCAAGCTAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEFQSWH*EQARSN
Trigger: ATTTGACCTAGCTTGCTCTCAGTGCCAGCTCTGGAA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACTCTCTGATTTGGTTTaGCTGGCTGACATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLSDLV*LADISR
Trigger: TCTGCTTATGTCAGCCAGTCAAACCAAATCAGAGAG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCGGGTGCTGCAGTAACTaGAGAAGGTGCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGGCCSN*RRCPSS
Trigger: ACTACTTGGGCACCTTCTTCAGTTACTGCAGCACCC...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGGGTGCTGCAGTAACTaGAGAAGGTGCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFGCCSN*RRCPSS
Trigger: ACTACTTGGGCACCTTCTTCAGTTACTGCAGCACCC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCACCTTGACCTCCACATaGTCAGGCTCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTTLTST*SGSELK
Trigger: TTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAGGT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGTGGCACACTTAGGCTaGGATTCTCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQVAHLG*DSLGPE
Trigger: TTCTGGCCCAAGAGAATCTCAGCCTAAGTGTGCCAC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTGGCTTTGCCGGGATaGGCAAAGAGCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLALPG*AKSKGL
Trigger: GAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCTGGCTTTGCCGGGATaGGCAAAGAGCAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILALPG*AKSKGL
Trigger: GAGCCCCTTGCTCTTTGCTCATCCCGGCAAAGCCAG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAACGAAGTTCCTTCCATaGCAAGCTGGGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGETKFLP*QAGFAD
Trigger: GTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGTTGGACAGCCGTGTCTaGAATGCAGTAGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILLDSRV*NAVGQN
Trigger: ATTCTGGCCTACTGCATTTCAGACACGGCTGTCCAA...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGCTAGAATCATGTTCATaGCAGTTGATGGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLLESCS*QLMGPQ
Trigger: TTGAGGACCCATCAACTGTCATGAACATGATTCTAG...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEHRSGW*GSWPRS
Trigger: ACTTCTTGGCCAACTACCTCACCACCCACTTCTATG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRVSGKQ*VHLVHS
Trigger: ACTATGGACGAGGTGGACTCACTGCTTTCCAGATAC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGATCGTTTCTCCCTCTaGGGGTATGGAAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCDRFSL*GYGKSR
Trigger: CCTGGACTTTCCATACCCTCAGAGGGAGAAACGATC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACATTTTCCTCCTCTTTaGGATCCAAAATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTHFPPL*DPKSIP
Trigger: TGGAATGGATTTTGGATCTCAAAGAGGAGGAAAATG...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCATTTTCCTCCTCTTTaGGATCCAAAATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLHFPPL*DPKSIP
Trigger: TGGAATGGATTTTGGATCTCAAAGAGGAGGAAAATG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTGCTCAATCAGCTGGTaGCCACAGGCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVCSISW*PQAMLS
Trigger: GGACAGCATTGCCTGTGGTCACCAGCTGATTGAGCA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGCACATCTACCTTGCTaGTGTAGCTGTCACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDAHLPC*CSCHKE
Trigger: CTCTTTGTGACAGCTACATCAGCAAGGTAGATGTGC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCCAGTTCTGTATATaGCTTTGCTTTGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSQFCI*LCFVTE
Trigger: TTCAGTCACAAAGCAAAGTCATATACAGAACTGGGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCAGTCATCTTCTTTCTaGAGAATGTGGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHQSSSF*RMWFSS
Trigger: GGAAGAAAACCACATTCTTCAGAAAGAAGATGACTG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTGTGTTCATGTGCCTTaGCACATCAGCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDCVHVP*HISCSH
Trigger: ATGACTGCAGCTGATGTGTCAAGGCACATGAACACA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCACGCTTCCAGGCAGTTaGGGAGGATGGTGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLTLPGS*GGWCPR
Trigger: ACGGGGACACCATCCTCCTCAACTGCCTGGAAGCGT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTTAGCCTCACAGACCTaGTCATTTATACACATACCC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLILASQT*SFIHIP
Trigger: GGGTATGTGTATAAATGATCAGGTCTGTGAGGCTAA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAATCCACAGGGTTTCTaGGCACCAGAGACACTGACT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGENPQGF*APETLT
Trigger: AGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGGGCTGCAAGATTTGTaGCCCATTAGTATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTGLQDL*PISIKC
Trigger: GCACTTTATACTAATGGGTCACAAATCTTGCAGCCC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGGGCTGCAAGATTTGTaGCCCATTAGTATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLGLQDL*PISIKC
Trigger: GCACTTTATACTAATGGGTCACAAATCTTGCAGCCC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCTTTTGGCAGAAGGAATaGAACATGCCTTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIFWQKE*NMPLLV
Trigger: CACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAA...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTTTCCCAGCACAGAGTaGAGGGAGATACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLFPSTE*REIQRN
Trigger: ATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAAAAATCCAAAAAGCTaGTTCTGCGAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLKNPKS*FCEAAS
Trigger: GGAAGCTGCTTCGCAGAAGCAGCTTTTTGGATTTTT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAGGTACACATGCCTGTaGCAGCTCCCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVRYTCL*QLPFSP
Trigger: AGGGGAGAATGGGAGCTGGCACAGGCATGTGTACCT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLQSPQ*LSNEVH
Trigger: GTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVTESGP*KARNAF
Trigger: AAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNINPKWF*GATQSP
Trigger: CGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCCTCACACAGGAGATaGAACTCAACCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSSHRR*NSTPSG
Trigger: ACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCATTCTGTGACCTTCTCTaGATAGGTATGGCCATACAG +
Preference number: 4 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAFCDLL*IGMAIQ
Trigger: CTGTATGGCCATACCTATGCAGAGAAGGTCACAGAA...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGCTGTTACCAGAATCTaGTCGAGGAAGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLAVTRI*SRKCLL
Trigger: CAACAAACACTTCCTCGAGCAGATTCTGGTAACAGC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCCTGGCACTGGGAGTaGTGGTGTGAGTTTACACAG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSWHWE*WCEFTQ
Trigger: CTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCACCATTCCTGCTGCTaGAGCGCTGCCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLHHSCC*SAANGL
Trigger: CAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGTAAAACACCATTCCTaGTGCTGCAGCGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTVKHHS*CCSAAN
Trigger: ATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTTTAC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCGCTCCACTAGAGCCGTaGTTATCCAAAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFAPLEP*LSKSPP
Trigger: AGGAGGACTTTTGGATAAGCACGGCTCTAGTGGAGC...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCTGGAAAACCTCGAATaGCATCAGCATTTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLILENLE*HQHLGV
Trigger: TACTCCTAAATGCTGATGGCATTCGAGGTTTTCCAG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAGTAGTCCATCTGCCTaGTGCCTGATGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSSPSA*CLMGSV
Trigger: AACAGACCCCATCAGGCAGCAGGCAGATGGACTACT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACACTTTGAAGGAGAACTaGAGCAAGGGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDTLKEN*SKGAAV
Trigger: TACTGCAGCACCCTTGCTGCAGTTCTCCTTCAAAGT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTAGGAGGGAGGAGGTCTaGTGGCTTTGCCGGGATGAG +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLRREEV*WLCRDE
Trigger: CTCATCCCGGCAAAGCCAGCAGACCTCCTCCCTCCT...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTTCACTGCCAGACTCTaGCCCTGCTGCAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVFTARL*PCCKDP
Trigger: AGGGTCTTTGCAGCAGGGGCAGAGTCTGGCAGTGAA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCCTGCATCCTTTATGCTaGTCAAATCGTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSILHPLC*SNRPHL
Trigger: GAGATGTGGACGATTTGAGCAGCATAAAGGATGCAG...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGGACTGCATCCTTTATaGTGCTCAAATCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLGLHPL*CSNRPH
Trigger: ATGTGGACGATTTGAGCAGCATAAAGGATGCAGTCC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTACGGGAAACAGGTATTaGCAACCTTCTTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: FLALVVTTLNGPAAGSEATGNRY*QPSLSH
Trigger: ATGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGT...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACGGGAAACAGGTATTaGCAACCTTCTTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITGNRY*QPSLSH
Trigger: ATGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACCGACTTCTCAGAGATaGATCCTTCACGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEPTSQR*ILHGKQ
Trigger: CTGTTTCCCGTGAAGGATGCATCTCTGAGAAGTCGG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTQPCLK*SRPESP
Trigger: TGGAGATTCTGGCCTACTGCATTTCAGACACGGCTG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTGCTGGTCGAGGGATTaGTCTGTCACTTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFCWSRD*SVTSRH
Trigger: GTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTGAGGGTCTCGGGATCTaGAGCCTGGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFEGLGI*SLVDNF
Trigger: GAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTC...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGGAGCAGGGTTCTCTCTaGAGCCTTCAACCACCATTT +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILEQGSL*SLQPPF
Trigger: AAATGGTGGTTGAAGGCTGCAGAGAGAACCCTGCTC...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGAGCAGGGTTCTCTCTaGAGCCTTCAACCACCATTT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQREQGSL*SLQPPF
Trigger: AAATGGTGGTTGAAGGCTGCAGAGAGAACCCTGCTC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGTGACCACAGGCAATaGTGTCCCGGTGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGDHRQ*CPGADS
Trigger: TGAATCTGCACCGGGACAGCATTGCCTGTGGTCACC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATGGTCCTTCATAAACTaGTGCAGCTCATACAGAATG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGWSFIN*CSSYRM
Trigger: CATTCTGTATGAGCTGCAGCAGTTTATGAAGGACCA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTGGTCCTTCATAAACTaGTGCAGCTCATACAGAATG +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLWSFIN*CSSYRM
Trigger: CATTCTGTATGAGCTGCAGCAGTTTATGAAGGACCA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCTTCCTTCCAGAGCTaGGGGATGTTTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESSFQS*GMFLGG
Trigger: ACCTCCAAGAAACATCCCGCAGCTCTGGAAGGAAGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTTCTTCCTTCCAGAGCTaGGGGATGTTTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSSSFQS*GMFLGG
Trigger: ACCTCCAAGAAACATCCCGCAGCTCTGGAAGGAAGA...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ATAATACAGAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGAGCACTTTCGCACCGATaGAAGAACCTGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: IIQKLRYGLYGTIVGSKGALSHR*KNLVTS
Trigger: GGAAGTGACCAGGTTCTTGCATCGGTGCGAAAGTGC...TCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTCTGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCACTTTCGCACCGATaGAAGAACCTGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQALSHR*KNLVTS
Trigger: GGAAGTGACCAGGTTCTTGCATCGGTGCGAAAGTGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGTCATCATTGTGTATTaGCTGGATCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTVIIVY*LDQALQ
Trigger: CTGGAGGGCCTGATCCAGGCAATACACAATGATGAC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAGGCAGAACGCAGTTTaGAACATATCAGGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTRQNAV*NISGRP
Trigger: GGGCCTACCTGATATGTTGCAAACTGCGTTCTGCCT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTGGGCACAGATGTCTTaGACTACTGCATCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVWAQMS*TTASPL
Trigger: CAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNRHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCGCCATCACTGCTGTTaGCCAGCTCTCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIRHHCC*PALRPR
Trigger: ACGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGGGCATCGCCATCACTaGTGTTGCCCAGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIGHRHH*CCPALR
Trigger: CCTGAGAGCTGGGCAACAGCAGTGATGGCGATGCCC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp TTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTGCTTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 4 (lower is better)
Translates to: LGLPGNPVLTSFQDVLCASFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...AGCACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTCCAGGACTTCTTGTaGTTGGGAGAAGAGACACCT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLQDFL*LGEETP
Trigger: AGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGATGACCCCACATGTCTaGATATCCATCCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRMTPHV*ISILWS
Trigger: GGACCACAGGATGGATATGCAGACATGTGGGGTCAT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCATGACCCCACATGTCTaGATATCCATCCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTMTPHV*ISILWS
Trigger: GGACCACAGGATGGATATGCAGACATGTGGGGTCAT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAATGACCCCACATGTCTaGATATCCATCCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEMTPHV*ISILWS
Trigger: GGACCACAGGATGGATATGCAGACATGTGGGGTCAT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTTTAGGCCCCACATTTaGAAATTGAAGTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSFRPHI*KLKSLS
Trigger: ACTCAGTGACTTCAATTTGCAAATGTGGGGCCTAAA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTCCCAAATTAAGGGCTaGAAGATTTGTGACCCATTA +
Preference number: 4 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLSQIKG*KICDPL
Trigger: TAATGGGTCACAAATCTTGCAGCCCTTAATTTGGGA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCCCAAATTAAGGGCTaGAAGATTTGTGACCCATTA +
Preference number: 4 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESQIKG*KICDPL
Trigger: TAATGGGTCACAAATCTTGCAGCCCTTAATTTGGGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGTCTTCTACCCTCTTTaGGATATCCCCTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTVFYPL*DIPLSL
Trigger: GAGGGACAAGGGGATATCCCAAAGAGGGTAGAAGAC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACTCGAGGATGTTCTCTaGAATGTCACCTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELEDVL*NVTLEV
Trigger: GACCTCCAAGGTGACATTCCAGAGAACATCCTCGAG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAAGGGCCTGTGCTGGCTaGGGAGACTGCCTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLRACAG*GDCLRR
Trigger: TCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCT...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGCAGGGCTCCATAGATaGCATCGACTACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLAGLHR*HRLPQG
Trigger: CCCCTGGGGTAGTCGATGCCATCTATGGAGCCCTGC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCTTTCCAAGCCTCGGCTaGGTTGGGATTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGFPSLG*VGIGEQ
Trigger: CTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAA...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGCTGACTCTAGGCTCTaGCAGTGTGTCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNADSRL*QCVQPR
Trigger: CCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAGAGCTCATCACAGCCTaGGCCCTGGGTCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLELITA*ALGPVQ
Trigger: CTGCACAGGACCCAGGGCCCAGGCTGTGATGAGCTC...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTTGCTGGGGGTCCTTaGCTGGCACTTTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLAGGP*LALSVR
Trigger: TCTTACAGAAAGTGCCAGCCAAGGACCCCCAGCAAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCTTGCTGGGGGTCCTTaGCTGGCACTTTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGLAGGP*LALSVR
Trigger: TCTTACAGAAAGTGCCAGCCAAGGACCCCCAGCAAG...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGACACAGAGGGCATAGATaGCATACTTCATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGHRGHR*HTSWHR
Trigger: TCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTG...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTTGCAGTCCTGGCACTaGGAGTGCTGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLQSWH*ECWCEF
Trigger: AAACTCACACCAGCACTCCCAGTGCCAGGACTGCAA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTCLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCTLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCACCTTGTGTCTCCACTaGGCCTCAGAGACAACCTTG +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGTLCLH*ASETTL
Trigger: CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGT...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTGCAGCGCTGCCAATaGCCTGTAGAGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLQRCQ*PVELSG
Trigger: GCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGTCCTCCTGGAGCATaGGGATGGGGTCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISPPGA*GWGLQR
Trigger: CCTCTGGAGACCCCATCCCCATGCTCCAGGAGGACT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTTGCTGAAGAACAACTaGAAAACCTCGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLILLKNN*KTSNAI
Trigger: GATGGCATTCGAGGTTTTCCAGTTGTTCTTCAGCAA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTAGTCCTCGCTTAGGCTaGGCCAGCACATCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFSPRLG*ASTSEA
Trigger: TGCTTCAGATGTGCTGGCCCAGCCTAAGCGAGGACT...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTGGGAGAGGGTGGTGTaGCTGGCAACACAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNWERVV*LATQSS
Trigger: CGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTRCDTS*EELCCS
Trigger: GCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGGCTGCCAGTCTCTCTaGGGGAACTTGTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFGCQSL*GNLSLK
Trigger: TTTGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGGCTGCCAGTCTCTCTaGGGGAACTTGTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCGCQSL*GNLSLK
Trigger: TTTGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAGGCTGAGATTCTCTTaGGCCAGAAGGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVRLRFS*ARRAAS
Trigger: ACTGGCAGCCCTTCTGGCCCAAGAGAATCTCAGCCT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCGTACATCTAGGGCAATaGGAGAATGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFVHLGQ*ENVGPG
Trigger: TCCTGGGCCTACATTCTCCCATTGCCCTAGATGTAC...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGTACATCTAGGGCAATaGGAGAATGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEVHLGQ*ENVGPG
Trigger: TCCTGGGCCTACATTCTCCCATTGCCCTAGATGTAC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCCCGGGACCAATCTCTaGCCACCAAGGATTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVPGTNL*PPRIPQ
Trigger: TTGAGGAATCCTTGGTGGCCAGAGATTGGTCCCGGG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTTCAAGGCACATGGTaGGGTCAGGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLQGTW*GQGFFA
Trigger: TGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCACTTCAAGGCACATaGTGGGGTCAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSLQGT*WGQGFF
Trigger: GAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTCACTTCAAGGCACATaGTGGGGTCAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLSLQGT*WGQGFF
Trigger: GAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGA...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCTGCACAGCCACAGTaGCCCAATCCACCTTCATGT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSAQPQ*PNPPSC
Trigger: ACATGAAGGTGGATTGGGCCACTGTGGCTGTGCAGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTTTCTCTGCGTATCTaGAAAGCAGTGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLSLRI*KAVSPP
Trigger: AGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAATTCCTGTGAGGGCTaGGTTGGTGGGAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTNSCEG*VGGKLL
Trigger: AAGGAGTTTCCCACCAACCCAGCCCTCACAGGAATT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAATTCCTGTGAGGGCTaGGTTGGTGGGAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGENSCEG*VGGKLL
Trigger: AAGGAGTTTCCCACCAACCCAGCCCTCACAGGAATT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCAAGCCCAGTCTTTGTaGAGACCTCAACGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFQAQSL*RPQRPV
Trigger: AACTGGGCGTTGAGGTCTCCACAAAGACTGGGCTTG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCTGATTGAGGTCAAATaGGGGCTTCAGACAGCGACT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLIEVK*GLQTAT
Trigger: AGTCGCTGTCTGAAGCCCCCATTTGACCTCAATCAG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRQRASL*TLGTQP
Trigger: TGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTTCTATAAAAACTTCTaGAGGACTCTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVFYKNF*RTLLVE
Trigger: CTCAACAAGGAGAGTCCTCCAGAAGTTTTTATAGAA...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CGGGTTGTATGGAACTATTGTGGGGAGCAAGGGATAAAGGTGACTAGGCAAGCCCCAAGGTTGGATCAATaGATTCTAGCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVVWNYCGEQGIKVTRQAPRLDQ*ILASSP
Trigger: TGGAGAACTTGCTAGAATCCATTGATCCAACCTTGG...GGCTTGCCTAGTCACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCCAAGGTTGGATCAATaGATTCTAGCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIPRLDQ*ILASSP
Trigger: TGGAGAACTTGCTAGAATCCATTGATCCAACCTTGG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGATTTCCAAACAGGGTTaGCAGAGGCAAAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLISKQG*QRQSGD
Trigger: ATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAAT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCATGGCAGCATCCAGCTaGAAGTCCTGCAGAACACGG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVMAASS*KSCRTR
Trigger: CCGTGTTCTGCAGGACTTCCAGCTGGATGCTGCCAT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTCTGCAGTAGGTCATaGCAGCATCCAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLCSRS*QHPAGS
Trigger: ACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCTCTGCAGTAGGTCATaGCAGCATCCAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLCSRS*QHPAGS
Trigger: ACTTCCAGCTGGATGCTGCCATGACCTACTGCAGAG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACATTTGAGCAGTTGCTaGATCTCACTGTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGHLSSC*ISLYFS
Trigger: AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCATTGTGTATTGCCTaGATCAGGCCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSLCIA*IRPSSS
Trigger: GGAGCTGGAGGGCCTGATCCAGGCAATACACAATGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCATTGTGTATTGCCTaGATCAGGCCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSLCIA*IRPSSS
Trigger: GGAGCTGGAGGGCCTGATCCAGGCAATACACAATGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGGGAGAAGAGACACCTaGAAAACAGGTTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTGRRDT*KTGLFH
Trigger: GTGGAATAAACCTGTTTTCCAGGTGTCTCTTCTCCC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACCCTGTATCCCTGTTTaGATGGTTAGCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTPCIPV*MVSLSF
Trigger: GAAAGAAAGGCTAACCATCCAAACAGGGATACAGGG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGAGAAGGACATTTCCTaGGAGATGGATACGTTCTAT +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGEKDIS*EMDTFY
Trigger: ATAGAACGTATCCATCTCCCAGGAAATGTCCTTCTC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGTGGTGTTTTTCTGTTaGAGACTACAGCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTVVFFC*RLQRGV
Trigger: AACACCACGCTGTAGTCTCCAACAGAAAAACACCAC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGGTATCTGTTTTGGTaGTGTTTTTCTGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGYLFW*CFSVGD
Trigger: GTCTCCAACAGAAAAACACCACCAAAACAGATACCC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTTCAACCCCTCAACATaGGTATCTGTTTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLFNPST*VSVLVV
Trigger: CACCACCAAAACAGATACCCATGTTGAGGGGTTGAA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGATAAAGGTGAGGAGAGGTTCATTCTaGAGACCGAGACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: EAEIRVVWNYCGEQGIKVRRGSF*RPRHCW
Trigger: CCAACAATGTCTCGGTCTCCAGAATGAACCTCTCCT...CACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGGAGATACAAAGAAATaGGTTATGCCGAACACATTC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLGDTKK*VMPNTF
Trigger: GAATGTGTTCGGCATAACTCATTTCTTTGTATCTCC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCACACCACCAATGCCTaGAGTATGTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFHTTNA*SMSSTL
Trigger: GAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCTACTCTTTGAGGGTTaGTGTCCTGCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLLFEG*CPAHIS
Trigger: TGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNRQLRS*DEESSS
Trigger: AGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTATCAAGTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSSRQPRFGKSSSFNNVSRQLRS*DEESSS
Trigger: AGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCT...ACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTACTTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCATCACAGGCATCCCTaGGGAGCTCATCACAGCCTG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLHHRHP*GAHHSL
Trigger: CAGGCTGTGATGAGCTCCTCAGGGATGCCTGTGATG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGAGAGTGTAGAGCACTaGGTGGCTGTCTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIESVEH*VAVSTV
Trigger: CACGGTGGAGACAGCCACTCAGTGCTCTACACTCTC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTATCAAGTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTGGATGTGCTATGTGCTaGGGGCTCTCTGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: LSSRQPRFGKSSSFNNVSGCAMC*GLSDGD
Trigger: GTCCCCATCAGAGAGCCCTCAGCACATAGCACATCC...ACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTACTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTTCCTGAGCAGCTCTaGCTTTCTTGCTTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLPEQL*LSCFGF
Trigger: GAAGCCAAAGCAAGAAAGTCAGAGCTGCTCAGGAAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTTCCAGGGATGGGTTTaGACCTCTGTCTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSFQGWV*TSVSAI
Trigger: GATGGCCGAGACAGAGGTTCAAACCCATCCCTGGAA...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGERTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AGTCAGGAATACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTTGAGAAGAAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SQEYCTDTVDTWPGKLRRRTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...TCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVNVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATTTGGTTTGACTGGCTaGCATAAGCAGATAATTGAG +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGFGLTG*HKQIIE
Trigger: CTCAATTATCTGCTTATGTCAGCCAGTCAAACCAAA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTCTCTGATTTGGTTTaGCTGGCTGACATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLSDLV*LADISR
Trigger: TCTGCTTATGTCAGCCAGTCAAACCAAATCAGAGAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCCTGGGCCAGCACATCTaGAGCAGTTCAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSLGQHI*SSSVML
Trigger: CAGCATCACTGAACTGCTTCAGATGTGCTGGCCCAG...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCAGAGCTCAAACTTTaGAGGAGAACTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSELKL*RRTAAR
Trigger: CCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTCAGAGCTCAAACTTTaGAGGAGAACTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSELKL*RRTAAR
Trigger: CCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTACCTTGACCTCCACATaGTCAGGCTCAGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFTLTST*SGSELK
Trigger: TTTGAGCTCTGAGCCTGATCATGTGGAGGTCAAGGT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFRDFLP*PPHDQA
Trigger: AGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCACAAGCTGGGTTTGCTaGCCTTTAACCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVTSWVC*PLTSGK
Trigger: CTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCACGAAGTTCCTTCCATaGCAAGCTGGGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGTKFLP*QAGFAD
Trigger: GTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGT...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTACGAAGTTCCTTCCATaGCAAGCTGGGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCTKFLP*QAGFAD
Trigger: GTCAGCAAACCCAGCTTGTCATGGAAGGAACTTCGT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCATAGAAGTGGGTGGTaGGGTAGTTGGCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCHRSGW*GSWPRS
Trigger: ACTTCTTGGCCAACTACCTCACCACCCACTTCTATG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQVSGKQ*VHLVHS
Trigger: ACTATGGACGAGGTGGACTCACTGCTTTCCAGATAC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCGTATCTGGAAAGCAGTaGGTCCACCTCGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSVSGKQ*VHLVHS
Trigger: ACTATGGACGAGGTGGACTCACTGCTTTCCAGATAC...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGGGCACAAATTCCTGTaGGGGCTGGGTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNGHKFL*GLGWWE
Trigger: TTCCCACCAACCCAGCCCTCACAGGAATTTGTGCCC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTCATTTTCCTCCTCTTTaGGATCCAAAATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCHFPPL*DPKSIP
Trigger: TGGAATGGATTTTGGATCTCAAAGAGGAGGAAAATG...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCATTTTCCTCCTCTTTaGGATCCAAAATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIHFPPL*DPKSIP
Trigger: TGGAATGGATTTTGGATCTCAAAGAGGAGGAAAATG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCGCTGGCTGCAAGATCTaGTCCAAAGATGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSAGCKI*SKDGTW
Trigger: CCACGTGCCATCTTTGGATCAGATCTTGCAGCCAGC...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGCATGATTCAGCTGATTaGGGTCAAATGGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWHDSAD*GQMGAS
Trigger: TGAAGCCCCCATTTGACCTCAATCAGCTGAATCATG...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTATCCTGCACCAGCCTTaGGCCATGATTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCILHQP*AMIQLI
Trigger: AATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGAT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGTCCCAGTTCTGTATATaGCTTTGCTTTGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: LLWEPQSISPPKDGGEVRSQFCI*LCFVTE
Trigger: TTCAGTCACAAAGCAAAGTCATATACAGAACTGGGA...CCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGACAGTCATCTTCTTTCTaGAGAATGTGGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRQSSSF*RMWFSS
Trigger: GGAAGAAAACCACATTCTTCAGAAAGAAGATGACTG...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTTTTCCCTCCCAGCATaGCCTTGCAGGCAACATCCA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVFSLPA*PCRQHP
Trigger: TGGATGTTGCCTGCAAGGTCATGCTGGGAGGGAAAA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATTAGCCTCACAGACCTaGTCATTTATACACATACCC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLASQT*SFIHIP
Trigger: GGGTATGTGTATAAATGATCAGGTCTGTGAGGCTAA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTCCAAAGCCAACCCTTaGCTCCCTTTTCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSKANP*LPFLRQ
Trigger: CTGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCCAAAGCCAACCCTTaGCTCCCTTTTCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSKANP*LPFLRQ
Trigger: CTGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGATTATTCCCTCATTCTaGCTCTGTCCAGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRIIPSF*LCPEAQ
Trigger: TTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAAT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAATTATTCCCTCATTCTaGCTCTGTCCAGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEIIPSF*LCPEAQ
Trigger: TTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAAT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAATCCACAGGGTTTCTaGGCACCAGAGACACTGACT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQNPQGF*APETLT
Trigger: AGTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGATGGATACGTTCTATaGCTCAAGGAAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDDGYVL*LKEGKA
Trigger: GGCTTTTCCTTCCTTGAGTCATAGAACGTATCCATC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSTESGP*KARNAF
Trigger: AAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGT...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCG +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLNPKWF*GATQSP
Trigger: CGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTT...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCCTCACACAGGAGATaGAACTCAACCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSSHRR*NSTPSG
Trigger: ACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCTTCCTTTCAGGATGTaGTATGTGCTGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGLPFRM*YVLRAL
Trigger: GAGAGCCCTCAGCACATAGCACATCCTGAAAGGAAG...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCTGATCTCATCCAGTTaGTCTTGGAGAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLISSS*SWRSLR
Trigger: CCTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCTGTCTCGGCCATCTaGCTGGCTCCTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSVSAI*LAPSCP
Trigger: CGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTGCTGTTAAGTTCCCGCGAAGGATaGAGGATGCCAGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: VGSQDLGSLLLSTMLVLLSSREG*RMPAVT
Trigger: AGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACT...TAACAGCACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTGCTGCTGCAGCGCTaGCAATGGCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLLLQR*QWPVEL
Trigger: CAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCAAACACCATTCCTGCTaGTGCAGCGCTGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSKHHSC*CSAANG
Trigger: GCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGTTT...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCTTTCTGGGCTGCCTaGTCCACCAGGGAAGACAGT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIAFWAA*STREDS
Trigger: ACTGTCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTGGAGCTTTCTGGGCTaGCTGCTCCACCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNWSFLG*LLHQGR
Trigger: TCTTCCCTGGTGGAGCAGGCAGCCCAGAAAGCTCCA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAGTAGTCCATCTGCCTaGTGCCTGATGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSSPSA*CLMGSV
Trigger: AACAGACCCCATCAGGCAGCAGGCAGATGGACTACT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTACTTTGAAGGAGAACTaGAGCAAGGGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSTLKEN*SKGAAV
Trigger: TACTGCAGCACCCTTGCTGCAGTTCTCCTTCAAAGT...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGACTTTGAAGGAGAACTaGAGCAAGGGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRTLKEN*SKGAAV
Trigger: TACTGCAGCACCCTTGCTGCAGTTCTCCTTCAAAGT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGAGCACAGCTCAGGACTaGATCCTTTATGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILSTAQD*ILYAAQ
Trigger: TTGAGCAGCATAAAGGATGCAGTCCTGAGCTGTGCT...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAGCACAGCTCAGGACTaGATCCTTTATGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSTAQD*ILYAAQ
Trigger: TTGAGCAGCATAAAGGATGCAGTCCTGAGCTGTGCT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCAGCACAGCTCAGGACTaGATCCTTTATGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSTAQD*ILYAAQ
Trigger: TTGAGCAGCATAAAGGATGCAGTCCTGAGCTGTGCT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGACGGGAAACAGGTATTaGCAACCTTCTTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLTGNRY*QPSLSH
Trigger: ATGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQQPCLK*SRPESP
Trigger: TGGAGATTCTGGCCTACTGCATTTCAGACACGGCTG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCAGCTCCTCAAGGTCTaGCAGTCACACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNQLLKV*QSHHTG
Trigger: CCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTATGTTCATAAGCAGCTaGTCCAGCATGAACAGGGGG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCMFISS*SSMNRG
Trigger: CCCCCTGTTCATGCTGGAGCAGCTGCTTATGAACAT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGAGCAGGGTTCTCTCTaGAGCCTTCAACCACCATTT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQEQGSL*SLQPPF
Trigger: AAATGGTGGTTGAAGGCTGCAGAGAGAACCCTGCTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCTGGTACATCTTTGTTaGAGTAACTATAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHLVHLC*SNYSTD
Trigger: ATCAGTGCTATAGTTACTGCAACAAAGATGTACCAG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGATTCAGGATGGCAATaGACAAGGAGGCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLDSGWQ*TRRRWG
Trigger: CCCCCAGCGCCTCCTTGTGCATTGCCATCCTGAATC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCCAGAGAAAGGCTCTaGGTCCGAAGGGTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIARERL*VRRVAS
Trigger: GGAAGCTACCCTTCGGACGCAGAGCCTTTCTCTGGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTGGTCCTTCATAAACTaGTGCAGCTCATACAGAATG +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLWSFIN*CSSYRM
Trigger: CATTCTGTATGAGCTGCAGCAGTTTATGAAGGACCA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGTCATCATTGTGTATTaGCTGGATCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCVIIVY*LDQALQ
Trigger: CTGGAGGGCCTGATCCAGGCAATACACAATGATGAC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGATGACCCCACATGTCTaGATATCCATCCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQMTPHV*ISILWS
Trigger: GGACCACAGGATGGATATGCAGACATGTGGGGTCAT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATAATACAGAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGACAGTCCATGTTCACCTaGTCCTCATCTATTCCCTCC +
Preference number: 4 (lower is better)
Translates to: IIQKLRYGLYGTIVGSKGQSMFT*SSSIPS
Trigger: GGAGGGAATAGATGAGGAGCAGGTGAACATGGACTG...TCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTCTGTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGTCTTCTACCCTCTTTaGGATATCCCCTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCVFYPL*DIPLSL
Trigger: GAGGGACAAGGGGATATCCCAAAGAGGGTAGAAGAC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCACATCTCAGCAGATTTaGACACACCACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFTSQQI*THHQCL
Trigger: CAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGT...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGTCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAA +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQSGMSP*RSSDNK
Trigger: TTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGA...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAA +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLISGMSP*RSSDNK
Trigger: TTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTTCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAA +
Preference number: 4 (lower is better)
Translates to: EGIDGILHGTEALVECQVSGMSP*RSSDNK
Trigger: TTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGA...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAA +
Preference number: 4 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSGMSP*RSSDNK
Trigger: TTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCTCGAGGATGTTCTCTaGAATGTCACCTTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLEDVL*NVTLEV
Trigger: GACCTCCAAGGTGACATTCCAGAGAACATCCTCGAG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCAGCTCTCCCTCCTTaGATTTCCGTCAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPALPP*ISVRHV
Trigger: CACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCTGGAGCAGCCTCTTaGCTGACTCTAGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISGAAS*LTLGSG
Trigger: GCCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGCAACAGATCTCTCTTTaGTATGGGGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWQQISL*YGVAAL
Trigger: CAGAGCAGCAACCCCATACCAAAGAGAGATCTGTTG...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSRWHTS*HRSPGR
Trigger: TCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTGCTGTTAATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: VGSQDLGSLLLSTMLVLLISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...TAACAGCACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCCSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQCSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCTCGGCCATCTGCCTaGCTCCTTCTTGTCCGACGA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISRPSA*LLLVRR
Trigger: TCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATTGCTGAAGAACAACTaGAAAACCTCGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLLKNN*KTSNAI
Trigger: GATGGCATTCGAGGTTTTCCAGTTGTTCTTCAGCAA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTTGCTGAAGAACAACTaGAAAACCTCGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLLLKNN*KTSNAI
Trigger: GATGGCATTCGAGGTTTTCCAGTTGTTCTTCAGCAA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACACAGTGGAGGAGTCCTaGGCTCTGGCAGCTCTAGTG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNTVEES*ALAALV
Trigger: CACTAGAGCTGCCAGAGCCCAGGACTCCTCCACTGT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCAGATGTGACACCAGTTaGGAAGAGCTCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGRCDTS*EELCCS
Trigger: GCTGCAACAGAGCTCTTCCCAACTGGTGTCACATCT...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGGGAGGAGGTCTGCTaGCTTTGCCGGGATGAGCAA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIREEVC*LCRDEQ
Trigger: TTGCTCATCCCGGCAAAGCCAGCAGACCTCCTCCCT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCACTTTAGTCCTTCTTaGACAGCCGTGTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDHFSPS*TAVSEM
Trigger: CATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCCAGTCACACCACACTaGGGGAGACTGCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLPVTPH*GRLQTQ
Trigger: CTGGGTTTGCAGTCTCCCCCAGTGTGGTGTGACTGG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCACTTCAAGGCACATaGTGGGGTCAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSLQGT*WGQGFF
Trigger: GAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGGTCAGCAGAATCTTaGATCCCACATACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGSAES*IPHTAP
Trigger: AGGCGCTGTATGTGGGATCCAAGATTCTGCTGACCC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTACAAGTGGGAATAGCTaGCCCGGTGCTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLTSGNS*PGAAQA
Trigger: TGCCTGAGCAGCACCGGGCCAGCTATTCCCACTTGT...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTACAAGTGGGAATAGCTaGCCCGGTGCTGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNITSGNS*PGAAQA
Trigger: TGCCTGAGCAGCACCGGGCCAGCTATTCCCACTTGT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTCTTTCTCTGCGTATCTaGAAAGCAGTGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLLSLRI*KAVSPP
Trigger: AGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAG...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCTTTCTCTGCGTATCTaGAAAGCAGTGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLSLRI*KAVSPP
Trigger: AGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTAATTCCTGTGAGGGCTaGGTTGGTGGGAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFNSCEG*VGGKLL
Trigger: AAGGAGTTTCCCACCAACCCAGCCCTCACAGGAATT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGAGGGCTTTCATTCTTaGAGCTGTCTAGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEEGFHS*SCLELL
Trigger: CAGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTGGTTACTGCAGCTaGCTGCAAGATCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGPGYCS*LQDLIQ
Trigger: TTGGATCAGATCTTGCAGCCAGCTGCAGTAACCAGG...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCTGGTTACTGCAGCTaGCTGCAAGATCTGATCCAA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPGYCS*LQDLIQ
Trigger: TTGGATCAGATCTTGCAGCCAGCTGCAGTAACCAGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTTCGGCTTCCAAAAGCTaGTTCCTTAGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSSASKS*FLSLVT
Trigger: AGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGA...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCATGCCACGCCCCGGTaGTATCAAGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLHATPR*YQAQSL
Trigger: CAAAGACTGGGCTTGATACCACCGGGGCGTGGCATG...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTGATTGAGGTCAAATaGGGGCTTCAGACAGCGACT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLIEVK*GLQTAT
Trigger: AGTCGCTGTCTGAAGCCCCCATTTGACCTCAATCAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQQRASL*TLGTQP
Trigger: TGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCAGTTCCCTCAGGGTaGCAAAGTAATCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRPVPSG*QSNRHL
Trigger: AAGATGACGATTACTTTGCCACCCTGAGGGAACTGG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGCCAGTTCCCTCAGGGTaGCAAAGTAATCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQPVPSG*QSNRHL
Trigger: AAGATGACGATTACTTTGCCACCCTGAGGGAACTGG...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACCAGTTCCCTCAGGGTaGCAAAGTAATCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEPVPSG*QSNRHL
Trigger: AAGATGACGATTACTTTGCCACCCTGAGGGAACTGG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTTCTATAAAAACTTCTaGAGGACTCTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSFYKNF*RTLLVE
Trigger: CTCAACAAGGAGAGTCCTCCAGAAGTTTTTATAGAA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCATTTGAGCAGTTGCTaGATCTCACTGTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLHLSSC*ISLYFS
Trigger: AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATG...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGGCCCTCCAGCTCCTaGGGCGGAATTCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIRPSSS*GGILLN
Trigger: GTTCAAGAGAATTCCGCCCCAGGAGCTGGAGGGCCT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCTTGTCAGAAGCCACTaGGCACAGATGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLVRSH*AQMSCT
Trigger: AGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCTTGTCAGAAGCCACTaGGCACAGATGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLVRSH*AQMSCT
Trigger: AGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAGGACTTCTTGTGCTTaGGAGAAGAGACACCTGGAA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRRTSCA*EKRHLE
Trigger: TTCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTGGAGACTACAGCGTaGTGTTCAAAGGCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLETTA*CSKAFS
Trigger: GCTAAAAGCCTTTGAACACCACGCTGTAGTCTCCAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGGGTATCTGTTTTGGTaGTGTTTTTCTGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLGYLFW*CFSVGD
Trigger: GTCTCCAACAGAAAAACACCACCAAAACAGATACCC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CAA 72 bp ACTCTCACCACAAACGAGTATGGAGGGCTTTCATTCTaGGAGCTGTCTAGAGCTTCTGGTTTTTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TLTTNEYGGLSF*ELSRASGFSEG
Trigger: GCCTTCAGAAAAACCAGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTCCATACTCGTTTGTGGTGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCACACCACCAATGCCTaGAGTATGTCTTCTACCCTC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVHTTNA*SMSSTL
Trigger: GAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCTACTCTTTGAGGGTTaGTGTCCTGCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVLLFEG*CPAHIS
Trigger: TGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVAMPFE*GPPVHS
Trigger: AGAATGCACTGGTGGACCTCATTCGAAAGGCATTGC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGCTCTTGGAGAAGCCTaGGGAAGGCCCCTATTGCAA +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNALGEA*GRPLLQ
Trigger: TTGCAATAGGGGCCTTCCTCAGGCTTCTCCAAGAGC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTGAGGGCTGCGGCTACTaGTCTCATCCAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLEGCGY*SHPVAL
Trigger: AAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTC...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGAGGGCTGCGGCTACTaGTCTCATCCAGTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNEGCGY*SHPVAL
Trigger: AAGAGCAACTGGATGAGATCAGTAGCCGCAGCCCTC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGGATGAGTGAACTTTaGGGATGGGGGTGCAATCTA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGMSEL*GWGCNL
Trigger: TAGATTGCACCCCCATCCTCAAAGTTCACTCATCCC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCTGGTAGCGCTCCATaGACATCAGTTCCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPGSAP*TSVPLN
Trigger: GTTCAGGGGAACTGATGTTCATGGAGCGCTACCAGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTACACTTCAGTGAGCTaGAGGGCCCGGGACCAATCT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIYTSVS*RARDQS
Trigger: AGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTAGAATCATGTTCATaGCAGTTGATGGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLESCS*QLMGPQ
Trigger: TTGAGGACCCATCAACTGTCATGAACATGATTCTAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGCTTTTGATGAAGGCTaGTTAAATGTTCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQAFDEG*LNVLLE
Trigger: TTCCAAGAGAACATTTAATCAGCCTTCATCAAAAGC...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGCTGGCTGCAAGATCTaGTCCAAAGATGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNAGCKI*SKDGTW
Trigger: CCACGTGCCATCTTTGGATCAGATCTTGCAGCCAGC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTCCCAGTTCTGTATATaGCTTTGCTTTGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLSQFCI*LCFVTE
Trigger: TTCAGTCACAAAGCAAAGTCATATACAGAACTGGGA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCAGAGGCAAAGTGGTaGTTTGAGAGGTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIAEAKW*FERSQH
Trigger: GTGCTGGGACCTCTCAAATCACCACTTTGCCTCTGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTCCAAAGCCAACCCTTaGCTCCCTTTTCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSKANP*LPFLRQ
Trigger: CTGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGATTATTCCCTCATTCTaGCTCTGTCCAGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQIIPSF*LCPEAQ
Trigger: TTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAAT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGATGGATACGTTCTATaGCTCAAGGAAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEDGYVL*LKEGKA
Trigger: GGCTTTTCCTTCCTTGAGTCATAGAACGTATCCATC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGGGCTGCAAGATTTGTaGCCCATTAGTATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEGLQDL*PISIKC
Trigger: GCACTTTATACTAATGGGTCACAAATCTTGCAGCCC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGGGCTGCAAGATTTGTaGCCCATTAGTATAAAGTGC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTGLQDL*PISIKC
Trigger: GCACTTTATACTAATGGGTCACAAATCTTGCAGCCC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAGGTACACATGCCTGTaGCAGCTCCCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLRYTCL*QLPFSP
Trigger: AGGGGAGAATGGGAGCTGGCACAGGCATGTGTACCT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCTGGACACACCACCAATaGCTGAAGTATGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFWTHHQ*LKYVFY
Trigger: GTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCA...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCTGTTACCAGAATCTaGTCGAGGAAGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAVTRI*SRKCLL
Trigger: CAACAAACACTTCCTCGAGCAGATTCTGGTAACAGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACATGGGGTTGCTGCTCTaGTGTATGCACCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNMGLLL*CMHHSR
Trigger: CCTGGAGTGGTGCATACAGCAGAGCAGCAACCCCAT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTATGGGGTTGCTGCTCTaGTGTATGCACCACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLMGLLL*CMHHSR
Trigger: CCTGGAGTGGTGCATACAGCAGAGCAGCAACCCCAT...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTCCTGGCACTGGGAGTaGTGGTGTGAGTTTACACAG +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSSWHWE*WCEFTQ
Trigger: CTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGA...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNITLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTATCAAGTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LSSRQPRFGKSSSFNNVSTLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...ACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTACTTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCACCTTGGAAAGTCGATaGAGGCGGCTCTGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLTLESR*RRLCSP
Trigger: TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACACCACAGAGATTCACTaGCAGACTCTGCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNTTEIH*QTLPLL
Trigger: CAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGCTGGTCGAGGGATTaGTCTGTCACTTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSCWSRD*SVTSRH
Trigger: GTGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCA...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGAGGGTCTCGGGATCTaGAGCCTGGTGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIEGLGI*SLVDNF
Trigger: GAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTCTGGTACATCTTTGTTaGAGTAACTATAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCLVHLC*SNYSTD
Trigger: ATCAGTGCTATAGTTACTGCAACAAAGATGTACCAG...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTCCTTCATAAACTGCTaGAGCTCATACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDSFINC*SSYRMW
Trigger: CCACATTCTGTATGAGCTGCAGCAGTTTATGAAGGA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AGAGATACCTGCTTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGATCCTTCATAAACTGCTaGAGCTCATACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: RDTCLLWEPQSISPPKDGSFINC*SSYRMW
Trigger: CCACATTCTGTATGAGCTGCAGCAGTTTATGAAGGA...TCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAAGCAGGTATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGTCATCATTGTGTATTaGCTGGATCAGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVVIIVY*LDQALQ
Trigger: CTGGAGGGCCTGATCCAGGCAATACACAATGATGAC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTGGGCACAGATGTCTTaGACTACTGCATCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLWAQMS*TTASPL
Trigger: CAGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGAAAGGTCCTATCCTTaGCCGGGAAGGCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIERSYP*PGRQVG
Trigger: CCCTACTTGCCTTCCCGGGCAAGGATAGGACCTTTC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTACATCTCAGCAGATTTaGACACACCACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFTSQQI*THHQCL
Trigger: CAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCTCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAA +
Preference number: 4 (lower is better)
Translates to: EADSKQYAQGHTRLTLSISGMSP*RSSDNK
Trigger: TTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGA...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIRLGWD*RTGLAL
Trigger: CAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCAACAGATCTCTCTTTaGTATGGGGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFQQISL*YGVAAL
Trigger: CAGAGCAGCAACCCCATACCAAAGAGAGATCTGTTG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCAGGTGCTCAGGGACTaGAGCATCAACTGCATCAGG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNQVLRD*SINCIR
Trigger: CCTGATGCAGTTGATGCTCCAGTCCCTGAGCACCTG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQRWHTS*HRSPGR
Trigger: TCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCACAGAGGGCATAGATaGCATACTTCATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQHRGHR*HTSWHR
Trigger: TCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTATAAGCAAGGGTCTTTaGGACTCCCAGGGAACCCCG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIISKGL*DSQGTP
Trigger: CGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTAT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGECLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCCTCAGAGACAACCTTaGAAAGTCGATGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLPQRQP*KVDAGG
Trigger: GCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTGCTCCTCTGAACGATaGTTGCTTGTCACCACCTTG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVCSSER*LLVTTL
Trigger: CAAGGTGGTGACAAGCAACCATCGTTCAGAGGAGCA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTGCCAGTTCTCCGAATaGTGCTGCTACCCGCATCTG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNCQFSE*CCYPHL
Trigger: CAGATGCGGGTAGCAGCACCATTCGGAGAACTGGCA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGTCCTCGCTTAGGCTaGGCCAGCACATCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISPRLG*ASTSEA
Trigger: TGCTTCAGATGTGCTGGCCCAGCCTAAGCGAGGACT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGAGGGTGGTGTGGCTaGCAACACAGTCCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIRGWCG*QHSPRL
Trigger: TAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCTCGGTGTAGAAAGTaGGAGGTCATCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIARCRK*EVIQAV
Trigger: CACTGCCTGGATGACCTCCCACTTTCTACACCGAGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCACTTTAGTCCTTCTTaGACAGCCGTGTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRHFSPS*TAVSEM
Trigger: CATTTCAGACACGGCTGTCCAAGAAGGACTAAAGTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCACTTCAAGGCACATaGTGGGGTCAGGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSLQGT*WGQGFF
Trigger: GAAGAATCCCTGACCCCACCATGTGCCTTGAAGTGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGCCAAGCTAGTGTGCTaGTCGAGGGATTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNAKLVC*SRDCSV
Trigger: GACAGAGCAATCCCTCGACCAGCACACTAGCTTGGC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGCCAAGCTAGTGTGCTaGTCGAGGGATTGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLAKLVC*SRDCSV
Trigger: GACAGAGCAATCCCTCGACCAGCACACTAGCTTGGC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCTTTCTCTGCGTATCTaGAAAGCAGTGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFLSLRI*KAVSPP
Trigger: AGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAATTCCTGTGAGGGCTaGGTTGGTGGGAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVNSCEG*VGGKLL
Trigger: AAGGAGTTTCCCACCAACCCAGCCCTCACAGGAATT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGAGGGCTTTCATTCTTaGAGCTGTCTAGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQEGFHS*SCLELL
Trigger: CAGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTGGTGCAGATTCAGGATaGCAATGCACAAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLGADSG*QCTRRR
Trigger: GCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACC...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLAGSLA*LLQLAA
Trigger: TGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGC...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGCTGGTTCCTTAGCCTaGTTACTGCAGCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLAGSLA*LLQLAA
Trigger: TGCAGCCAGCTGCAGTAACCAGGCTAAGGAACCAGC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTCGGCTTCCAAAAGCTaGTTCCTTAGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSASKS*FLSLVT
Trigger: AGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCTTCTATAAAAACTTCTaGAGGACTCTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: WEPQSISPPKDGGEVRDFFYKNF*RTLLVE
Trigger: CTCAACAAGGAGAGTCCTCCAGAAGTTTTTATAGAA...GAAATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCCCCACTTTTATAGCTTaGTTGGAAAATGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: WEPQSISPPKDGGEVRDFPTFIA*LENAFY
Trigger: ATAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGG...GAAATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCCCACTTTTATAGCTTaGTTGGAAAATGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLPTFIA*LENAFY
Trigger: ATAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTGTCCCCGTCACTTTTaGCTGCCATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNICPRHF*LPCLTH
Trigger: GTGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGGGAGAAGAGACACCTaGAAAACAGGTTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEGRRDT*KTGLFH
Trigger: GTGGAATAAACCTGTTTTCCAGGTGTCTCTTCTCCC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTTGTCACATCTTGCGTaGGAAGACAAGACAGTGCAT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLSHLA*EDKTVH
Trigger: ATGCACTGTCTTGTCTTCCCACGCAAGATGTGACAA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGACATTTCCTGGGAGATaGATACGTTCTATGACTCAA +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLTFPGR*IRSMTQ
Trigger: TTGAGTCATAGAACGTATCCATCTCCCAGGAAATGT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATTGGAGACTACAGCGTaGTGTTCAAAGGCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELETTA*CSKAFS
Trigger: GCTAAAAGCCTTTGAACACCACGCTGTAGTCTCCAA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGTGGTGTTTTTCTGTTaGAGACTACAGCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRVVFFC*RLQRGV
Trigger: AACACCACGCTGTAGTCTCCAACAGAAAAACACCAC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTGTAATGTTCTTCAGTaGTGCCTTTGCTTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLCNVLQ*CLCFQW
Trigger: CCACTGGAAGCAAAGGCACCACTGAAGAACATTACA...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGAGACATCAGTATAAAATaGAGATTCAAGAGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRDISIK*RFKSSL
Trigger: TAGGCTGCTCTTGAATCTCCATTTTATACTGATGTC...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
3UTR CAA 72 bp GGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTaGGGATCTAGGCTAAGACTTTTCACACTCACTGAA +
Preference number: 4 (lower is better)
Translates to: GMKHAFAGEGSD*GSRLRLFTLTE
Trigger: TTCAGTGAGTGTGAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
3UTR CAA 72 bp AGGCAGCAATCAAGTACTTTCCCCAGCTCTCCAAGGTaGGATCAATGGATTCTAGCAAGTTCTCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: RQQSSTFPSSPR*DQWILASSPKC
Trigger: ACACTTTGGAGAACTTGCTAGAATCCATTGATCCAACCTTGGAGAGCTGGGGAAAGTACTTGATTGCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCGGTGGCTTTTCTGTaGCCTTCTCTGCATAGGTAT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSVAFL*PSLHRY
Trigger: ATACCTATGCAGAGAAGGTCACAGAAAAGCCACCGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLGVLV*VYTEGI
Trigger: TATGCCCTCTGTGTAAACTCACACCAGCACTCCCAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTAACGTGAACAGCACCTaGTGGGCTTCTGCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLNVNST*WASAKF
Trigger: GAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTT...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGGGTGCTGCAGTAACTaGAGAAGGTGCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNGCCSN*RRCPSS
Trigger: ACTACTTGGGCACCTTCTTCAGTTACTGCAGCACCC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCAGGGATTTCCTACCTTaGCCTCCACATGATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSRDFLP*PPHDQA
Trigger: AGCCTGATCATGTGGAGGTCAAGGTAGGAAATCCCT...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGTGGCACACTTAGGCTaGGATTCTCTTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIVAHLG*DSLGPE
Trigger: TTCTGGCCCAAGAGAATCTCAGCCTAAGTGTGCCAC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTACAAGCTGGGTTTGCTaGCCTTTAACCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNITSWVC*PLTSGK
Trigger: CTTCCCCGAGGTTAAAGGTCAGCAAACCCAGCTTGT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAAACCCAGAATCTTCTaGTACACCTGCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLKPRIF*YTCSSA
Trigger: GGCGGAGCTGCAGGTGTATCAGAAGATTCTGGGTTT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACAAACCCAGAATCTTCTaGTACACCTGCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNKPRIF*YTCSSA
Trigger: GGCGGAGCTGCAGGTGTATCAGAAGATTCTGGGTTT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGCTTTTGATGAAGGCTaGTTAAATGTTCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLAFDEG*LNVLLE
Trigger: TTCCAAGAGAACATTTAATCAGCCTTCATCAAAAGC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCATCCTGCACCAGCCTTaGGCCATGATTCAGCTGATT +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSILHQP*AMIQLI
Trigger: AATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGAT...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp AGGATAAAGAGATACCTGCTTACTCTGGGAACCTCAATCCATCAGTCCACCCAAACTTTGCTTTGTGACTaGAGAACCGAATACAGGTCA +
Preference number: 4 (lower is better)
Translates to: RIKRYLLTLGTSIHQSTQTLLCD*RTEYRS
Trigger: TGACCTGTATTCGGTTCTTCAGTCACAAAGCAAAGT...TTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAAGCAGGTATCTCTTTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR TCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCACTTTGCTTTGTGACTaGAGAACCGAATACAGGTCA +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTTLLCD*RTEYRS
Trigger: TGACCTGTATTCGGTTCTTCAGTCACAAAGCAAAGT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTGTGTTCATGTGCCTTaGCACATCAGCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVCVHVP*HISCSH
Trigger: ATGACTGCAGCTGATGTGTCAAGGCACATGAACACA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCACTTCCATCTGCAGCTaGAGTGTGTTCATGTGCCTT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVTSICS*SVFMCL
Trigger: AAGGCACATGAACACACTTCAGCTGCAGATGGAAGT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAACATGGCACTTGCGTaGAAGGTCCTATCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLNMALA*KVLSLP
Trigger: GGGCAAGGATAGGACCTTTCACGCAAGTGCCATGTT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCCAAAGCCAACCCTTaGCTCCCTTTTCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSKANP*LPFLRQ
Trigger: CTGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCCACCAACCAGATGTaGCCTATTCATTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSTNQM*PIHYSL
Trigger: GAGGGAATAATGAATAGGTCACATCTGGTTGGTGGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCAAAACTTCTCATCTaGCAGATGTCCATGAGTTGT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRPKLLI*QMSMSC
Trigger: ACAACTCATGGACATCTGTCAGATGAGAAGTTTTGG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGATGGATACGTTCTATaGCTCAAGGAAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQDGYVL*LKEGKA
Trigger: GGCTTTTCCTTCCTTGAGTCATAGAACGTATCCATC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCAAAGAAATGAGTTATaGCGAACACATTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIQRNEL*RTHSQC
Trigger: ACATTGAGAATGTGTTCGGCATAACTCATTTCTTTG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTTTTCCCAGCACAGAGTaGAGGGAGATACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSFPSTE*REIQRN
Trigger: ATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAA...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAAAAATCCAAAAAGCTaGTTCTGCGAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRKNPKS*FCEAAS
Trigger: GGAAGCTGCTTCGCAGAAGCAGCTTTTTGGATTTTT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTGGACACACCACCAATaGCTGAAGTATGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFWTHHQ*LKYVFY
Trigger: GTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTGGACACACCACCAATaGCTGAAGTATGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQWTHHQ*LKYVFY
Trigger: GTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACAATGAGGTCCACCAGTaGATTCTGCAGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNNEVHQ*ILQRPV
Trigger: CACTGGCCTCTGCAGAATGCACTGGTGGACCTCATT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILQSPQ*LSNEVH
Trigger: GTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTTCTGTGACCTTCTCTaGATAGGTATGGCCATACAG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCFCDLL*IGMAIQ
Trigger: CTGTATGGCCATACCTATGCAGAGAAGGTCACAGAA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGCTGTTACCAGAATCTaGTCGAGGAAGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFAVTRI*SRKCLL
Trigger: CAACAAACACTTCCTCGAGCAGATTCTGGTAACAGC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCCTGGCACTGGGAGTaGTGGTGTGAGTTTACACAG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSWHWE*WCEFTQ
Trigger: CTGTGTAAACTCACACCAGCACTCCCAGTGCCAGGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGAGAGTCAGGAATACTaGACAGATACTGTTGACACC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQESQEY*TDTVDT
Trigger: GGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCAGTTCTCCGAATGGTaGTGCTACCCGCATCTGAGT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNQFSEW*CYPHLS
Trigger: ACTCAGATGCGGGTAGCAGCACCATTCGGAGAACTG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCTGCATCCTTTATGCTaGTCAAATCGTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLHPLC*SNRPHL
Trigger: GAGATGTGGACGATTTGAGCAGCATAAAGGATGCAG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCCCTTCAGGAATCACTaGCAGAGAAAGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIPFRNH*QRKALR
Trigger: ACGCAGAGCCTTTCTCTGGCAGTGATTCCTGAAGGG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATGCCTGACTCACTGACACATTTGAGCAGTTGCTGGATCTCACTGTACTTCTCTTCCTTCATAAACTGCTaGAGCTCATACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: MPDSLTHLSSCWISLYFSSFINC*SSYRMW
Trigger: CCACATTCTGTATGAGCTGCAGCAGTTTATGAAGGA...AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTCAGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCACTTTCGCACCGATaGAAGAACCTGGTCACTTCC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIALSHR*KNLVTS
Trigger: GGAAGTGACCAGGTTCTTGCATCGGTGCGAAAGTGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAACACATTTGAGCAGTTaGTGGATCTCACTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGETHLSS*WISLYF
Trigger: GAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCACATCTCAGCAGATTTaGACACACCACCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVTSQQI*THHQCL
Trigger: CAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTTTCCAAGCCTCGGCTaGGTTGGGATTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIFPSLG*VGIGEQ
Trigger: CTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCTTGCTGGGGGTCCTTaGCTGGCACTTTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILAGGP*LALSVR
Trigger: TCTTACAGAAAGTGCCAGCCAAGGACCCCCAGCAAG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCACAGAGGGCATAGATaGCATACTTCATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVHRGHR*HTSWHR
Trigger: TCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTGCAGTCCTGGCACTaGGAGTGCTGGTGTGAGTTT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLQSWH*ECWCEF
Trigger: AAACTCACACCAGCACTCCCAGTGCCAGGACTGCAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACAGGCAAGTGAGGCTCTaGGTGAAGATCAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNRQVRL*VKISRG
Trigger: ACCTCTGCTGATCTTCACCCAGAGCCTCACTTGCCT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFCLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGTGCCTATGAGGCCCTaGGTAACTGTCTTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLVPMRP*VTVFWL
Trigger: GAGCCAAAAGACAGTTACCCAGGGCCTCATAGGCAC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCCCGCATCTGAGTTCTaGTTTTCAATCTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQPASEF*FSILCS
Trigger: AGAGCACAAGATTGAAAACCAGAACTCAGATGCGGG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTTGCTGAAGAACAACTaGAAAACCTCGAATGCCATC +
Preference number: 4 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLLKNN*KTSNAI
Trigger: GATGGCATTCGAGGTTTTCCAGTTGTTCTTCAGCAA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAAGAGGGTGGTGTGGCTaGCAACACAGTCCTCGCTTA +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLRGWCG*QHSPRL
Trigger: TAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCT...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGGCTGCCAGTCTCTCTaGGGGAACTTGTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLGCQSL*GNLSLK
Trigger: TTTGAGAGACAAGTTCCCCCAGAGAGACTGGCAGCC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTTCAAGGCACATGGTaGGGTCAGGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLQGTW*GQGFFA
Trigger: TGCGAAGAATCCCTGACCCCACCATGTGCCTTGAAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCTTTCTCTGCGTATCTaGAAAGCAGTGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVLSLRI*KAVSPP
Trigger: AGGTGGACTCACTGCTTTCCAGATACGCAGAGAAAG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCAATTCCTGTGAGGGCTaGGTTGGTGGGAAACTCCTT +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSNSCEG*VGGKLL
Trigger: AAGGAGTTTCCCACCAACCCAGCCCTCACAGGAATT...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCCACCTCATCTGCTTTaGGGACTCTCACCACAAACG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLPPHLL*GLSPQT
Trigger: CGTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGATCTGATCCAAAGATaGCACGTGGCGATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLDLIQR*HVAIGS
Trigger: GCTGCCTATCGCCACGTGCCATCTTTGGATCAGATC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGATCTGATCCAAAGATaGCACGTGGCGATAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNDLIQR*HVAIGS
Trigger: GCTGCCTATCGCCACGTGCCATCTTTGGATCAGATC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCGGCTTCCAAAAGCTaGTTCCTTAGCCTGGTTACT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSASKS*FLSLVT
Trigger: AGTAACCAGGCTAAGGAACCAGCTTTTGGAAGCCGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACCAAGGTTGGATCAATaGATTCTAGCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEPRLDQ*ILASSP
Trigger: TGGAGAACTTGCTAGAATCCATTGATCCAACCTTGG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACATGGCGGCCCGAACTTaGTCCTTCATAAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNMAART*SFINCC
Trigger: GCAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCAT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATAATACAGAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGAATTTCCAAACAGGGTTaGCAGAGGCAAAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IIQKLRYGLYGTIVGSKGISKQG*QRQSGD
Trigger: ATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAAT...TCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTCTGTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGATTTCCAAACAGGGTTaGCAGAGGCAAAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQISKQG*QRQSGD
Trigger: ATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAAT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDNFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCCCTGTATCCCTGTTTaGATGGTTAGCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQPCIPV*MVSLSF
Trigger: GAAAGAAAGGCTAACCATCCAAACAGGGATACAGGG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGTGGTGTTTTTCTGTTaGAGACTACAGCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCVVFFC*RLQRGV
Trigger: AACACCACGCTGTAGTCTCCAACAGAAAAACACCAC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTTCAACCCCTCAACATaGGTATCTGTTTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCFNPST*VSVLVV
Trigger: CACCACCAAAACAGATACCCATGTTGAGGGGTTGAA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTACTCTTTGAGGGTTaGTGTCCTGCCCACATCTCA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLLFEG*CPAHIS
Trigger: TGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLAMPFE*GPPVHS
Trigger: AGAATGCACTGGTGGACCTCATTCGAAAGGCATTGC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTGGGAGTGCTGGTGTaGGTTTACACAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLLGVLV*VYTEGI
Trigger: TATGCCCTCTGTGTAAACTCACACCAGCACTCCCAG...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTCCAGAGCTGGCACTaGGAGCAAGCTAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLFQSWH*EQARSN
Trigger: ATTTGACCTAGCTTGCTCTCAGTGCCAGCTCTGGAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTGGACAGCCGTGTCTaGAATGCAGTAGGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLDSRV*NAVGQN
Trigger: ATTCTGGCCTACTGCATTTCAGACACGGCTGTCCAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGAGGACTCTCCTTGTTaGGAAGGTGCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNEDSPC*EGAEEL
Trigger: AAGCTCTTCTGCACCTTCTCAACAAGGAGAGTCCTC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGAGGACTCTCCTTGTTaGGAAGGTGCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLEDSPC*EGAEEL
Trigger: AAGCTCTTCTGCACCTTCTCAACAAGGAGAGTCCTC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGACTTTGCTTTGTGACTaGAGAACCGAATACAGGTCA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQTLLCD*RTEYRS
Trigger: TGACCTGTATTCGGTTCTTCAGTCACAAAGCAAAGT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCAGTCATCTTCTTTCTaGAGAATGTGGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRQSSSF*RMWFSS
Trigger: GGAAGAAAACCACATTCTTCAGAAAGAAGATGACTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTTTGGCTGCCATGCCTaGCTCACTGACACATTTGAG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIFGCHA*LTDTFE
Trigger: CTCAAATGTGTCAGTGAGTCAGGCATGGCAGCCAAA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCCACCAACCAGATGTaGCCTATTCATTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSTNQM*PIHYSL
Trigger: GAGGGAATAATGAATAGGTCACATCTGGTTGGTGGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGATGGATACGTTCTATaGCTCAAGGAAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVDGYVL*LKEGKA
Trigger: GGCTTTTCCTTCCTTGAGTCATAGAACGTATCCATC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCAAAGAAATGAGTTATaGCGAACACATTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYQRNEL*RTHSQC
Trigger: ACATTGAGAATGTGTTCGGCATAACTCATTTCTTTG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR GCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCAAAAATCCAAAAAGCTaGTTCTGCGAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSKNPKS*FCEAAS
Trigger: GGAAGCTGCTTCGCAGAAGCAGCTTTTTGGATTTTT...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR GCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLLQSPQ*LSNEVH
Trigger: GTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAG...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTCCTCACACAGGAGATaGAACTCAACCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLSSHRR*NSTPSG
Trigger: ACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTGAGAGTCAGGAATACTaGACAGATACTGTTGACACC +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFESQEY*TDTVDT
Trigger: GGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCCTCTGAACGATGGTTaGTTGTCACCACCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLPLNDG*LSPPCV
Trigger: GACACAAGGTGGTGACAAGCAACCATCGTTCAGAGG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCCCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTCTCCGAATGGTGCTaGTACCCGCATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLFSEWC*YPHLSS
Trigger: AGAACTCAGATGCGGGTAGCAGCACCATTCGGAGAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGACGGGAAACAGGTATTaGCAACCTTCTTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQTGNRY*QPSLSH
Trigger: ATGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCCGACTTCTCAGAGATaGATCCTTCACGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIPTSQR*ILHGKQ
Trigger: CTGTTTCCCGTGAAGGATGCATCTCTGAGAAGTCGG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCAGCCGTGTCTGAAATaGAGTAGGCCAGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIQPCLK*SRPESP
Trigger: TGGAGATTCTGGCCTACTGCATTTCAGACACGGCTG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTCCTTCATAAACTGCTaGAGCTCATACAGAATGTGG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSFINC*SSYRMW
Trigger: CCACATTCTGTATGAGCTGCAGCAGTTTATGAAGGA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTCCCAAATTAAGGGCTaGAAGATTTGTGACCCATTA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRSQIKG*KICDPL
Trigger: TAATGGGTCACAAATCTTGCAGCCCTTAATTTGGGA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTGTCTTCTACCCTCTTTaGGATATCCCCTTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLVFYPL*DIPLSL
Trigger: GAGGGACAAGGGGATATCCCAAAGAGGGTAGAAGAC...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESGMSP*RSSDNK
Trigger: TTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTATCATCCAGTTGCTCTTaGAGAAGCCTGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLSSSCS*RSLRKA
Trigger: GGCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGA...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGTACATCTAGGGCAATaGGAGAATGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLVHLGQ*ENVGPG
Trigger: TCCTGGGCCTACATTCTCCCATTGCCCTAGATGTAC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAGGGTCAGCAGAATCTTaGATCCCACATACAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLGSAES*IPHTAP
Trigger: AGGCGCTGTATGTGGGATCCAAGATTCTGCTGACCC...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCA +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNQRASL*TLGTQP
Trigger: TGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCCAAGGTTGGATCAATaGATTCTAGCAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFPRLDQ*ILASSP
Trigger: TGGAGAACTTGCTAGAATCCATTGATCCAACCTTGG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCACCGATGCAAGAACCTaGTCACTTCCATCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLTDART*SLPSAA
Trigger: AGCTGCAGATGGAAGTGACCAGGTTCTTGCATCGGT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTTGTCAGAAGCCACTaGGCACAGATGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLVRSH*AQMSCT
Trigger: AGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTTGTCAGAAGCCACTaGGCACAGATGTCTTGCACT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLVRSH*AQMSCT
Trigger: AGTGCAAGACATCTGTGCCCAGTGGCTTCTGACAAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGENFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGAGAAGGACATTTCCTaGGAGATGGATACGTTCTAT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQEKDIS*EMDTFY
Trigger: ATAGAACGTATCCATCTCCCAGGAAATGTCCTTCTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGTGGTGTTTTTCTGTTaGAGACTACAGCGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVVVFFC*RLQRGV
Trigger: AACACCACGCTGTAGTCTCCAACAGAAAAACACCAC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGGGTATCTGTTTTGGTaGTGTTTTTCTGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQGYLFW*CFSVGD
Trigger: GTCTCCAACAGAAAAACACCACCAAAACAGATACCC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
3UTR CAA 72 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATaGGCACCATGGTTACTTCCTGGCCCTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIG*APWLLPGPCSN
Trigger: GTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCGGAGATACAAAGAAATaGGTTATGCCGAACACATTC +
Preference number: 4 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSGDTKK*VMPNTF
Trigger: GAATGTGTTCGGCATAACTCATTTCTTTGTATCTCC...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGGAGATACAAAGAAATaGGTTATGCCGAACACATTC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFGDTKK*VMPNTF
Trigger: GAATGTGTTCGGCATAACTCATTTCTTTGTATCTCC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTCTCCACCGTGTAAATaGTACAACAGATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSPPCK*YNRSLF
Trigger: AAAGAGAGATCTGTTGTATCATTTACACGGTGGAGA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAGAACATCATGGGGATaGGTGAACTTTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLRTSWG*VNFEDG
Trigger: CCCATCCTCAAAGTTCACTCATCCCCATGATGTTCT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTTTGGTTTGACTGGCTaGCATAAGCAGATAATTGAG +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQFGLTG*HKQIIE
Trigger: CTCAATTATCTGCTTATGTCAGCCAGTCAAACCAAA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCAGAGCTCAAACTTTaGAGGAGAACTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISELKL*RRTAAR
Trigger: CCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTCTAGAATCATGTTCATaGCAGTTGATGGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFLESCS*QLMGPQ
Trigger: TTGAGGACCCATCAACTGTCATGAACATGATTCTAG...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGCTTTTGATGAAGGCTaGTTAAATGTTCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRAFDEG*LNVLLE
Trigger: TTCCAAGAGAACATTTAATCAGCCTTCATCAAAAGC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCTTTTGATGAAGGCTaGTTAAATGTTCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAFDEG*LNVLLE
Trigger: TTCCAAGAGAACATTTAATCAGCCTTCATCAAAAGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCATTTTCCTCCTCTTTaGGATCCAAAATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCHFPPL*DPKSIP
Trigger: TGGAATGGATTTTGGATCTCAAAGAGGAGGAAAATG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCCCAGTTCTGTATATaGCTTTGCTTTGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSQFCI*LCFVTE
Trigger: TTCAGTCACAAAGCAAAGTCATATACAGAACTGGGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTGTGTTCATGTGCCTTaGCACATCAGCTGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNICVHVP*HISCSH
Trigger: ATGACTGCAGCTGATGTGTCAAGGCACATGAACACA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTACTTCCATCTGCAGCTaGAGTGTGTTCATGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNITSICS*SVFMCL
Trigger: AAGGCACATGAACACACTTCAGCTGCAGATGGAAGT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCCCCAAAGCCATCTCTaGATTTTGGAATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIPQSHL*ILEWEG
Trigger: TCCTTCCCATTCCAAAATTCAGAGATGGCTTTGGGG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCCCAAAGCCATCTCTaGATTTTGGAATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPQSHL*ILEWEG
Trigger: TCCTTCCCATTCCAAAATTCAGAGATGGCTTTGGGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCAGATGCCTGCACCTaGAAACCCTTCTATTCAGAC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSDACT*KPFYSD
Trigger: GTCTGAATAGAAGGGTTTTCAGGTGCAGGCATCTGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTTTCCCAGCACAGAGTaGAGGGAGATACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVFPSTE*REIQRN
Trigger: ATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTAAAAATCCAAAAAGCTaGTTCTGCGAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFKNPKS*FCEAAS
Trigger: GGAAGCTGCTTCGCAGAAGCAGCTTTTTGGATTTTT...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACACTGTCTTTTGGCTCTaGCTTCACATGGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNTVFWL*LHMAWH
Trigger: ATGCCAAGCCATGTGAAGGCAGAGCCAAAAGACAGT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTATCAAGTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTCCTCTGACGTACTTGTaGTCAGCTCACTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: LSSRQPRFGKSSSFNNVSPLTYL*SAHYLY
Trigger: GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGG...ACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTACTTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR GCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCACGGGAAACAGGTATTaGCAACCTTCTTTGTCACAT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVTGNRY*QPSLSH
Trigger: ATGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCTGGTACATCTTTGTTaGAGTAACTATAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLVHLC*SNYSTD
Trigger: ATCAGTGCTATAGTTACTGCAACAAAGATGTACCAG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGCTGGTACATCTTTGTTaGAGTAACTATAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILLVHLC*SNYSTD
Trigger: ATCAGTGCTATAGTTACTGCAACAAAGATGTACCAG...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTTTAGGCCCCACATTTaGAAATTGAAGTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQFRPHI*KLKSLS
Trigger: ACTCAGTGACTTCAATTTGCAAATGTGGGGCCTAAA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCCCAAATTAAGGGCTaGAAGATTTGTGACCCATTA +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCSQIKG*KICDPL
Trigger: TAATGGGTCACAAATCTTGCAGCCCTTAATTTGGGA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCAACAGATCTCTCTTTaGTATGGGGTTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIQQISL*YGVAAL
Trigger: CAGAGCAGCAACCCCATACCAAAGAGAGATCTGTTG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAGATGGCATACTTCATaGCACAGAAGCCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLRWHTS*HRSPGR
Trigger: TCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCACAGAGGGCATAGATaGCATACTTCATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLHRGHR*HTSWHR
Trigger: TCTGTGCCATGAAGTATGCCATCTATGCCCTCTGTG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGAGGGCTTTCATTCTTaGAGCTGTCTAGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNEGFHS*SCLELL
Trigger: CAGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGAGGGCTTTCATTCTTaGAGCTGTCTAGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIEGFHS*SCLELL
Trigger: CAGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTACATTTCCTGGGAGATaGATACGTTCTATGACTCAA +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFTFPGR*IRSMTQ
Trigger: TTGAGTCATAGAACGTATCCATCTCCCAGGAAATGT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTTTGGTTTGACTGGCTaGCATAAGCAGATAATTGAG +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVFGLTG*HKQIIE
Trigger: CTCAATTATCTGCTTATGTCAGCCAGTCAAACCAAA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCTCTCTGATTTGGTTTaGCTGGCTGACATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILSDLV*LADISR
Trigger: TCTGCTTATGTCAGCCAGTCAAACCAAATCAGAGAG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTATCAGAGCTCAAACTTTaGAGGAGAACTGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLSELKL*RRTAAR
Trigger: CCTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGA...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCTTTTGATGAAGGCTaGTTAAATGTTCTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQAFDEG*LNVLLE
Trigger: TTCCAAGAGAACATTTAATCAGCCTTCATCAAAAGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGCAAAGAAATGAGTTATaGCGAACACATTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: LTLSISFQRHALNHYPILQRNEL*RTHSQC
Trigger: ACATTGAGAATGTGTTCGGCATAACTCATTTCTTTG...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTTCTGTGACCTTCTCTaGATAGGTATGGCCATACAG +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNFCDLL*IGMAIQ
Trigger: CTGTATGGCCATACCTATGCAGAGAAGGTCACAGAA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTGCTGTTACCAGAATCTaGTCGAGGAAGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLAVTRI*SRKCLL
Trigger: CAACAAACACTTCCTCGAGCAGATTCTGGTAACAGC...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGAGGAAGGCCCCTATTaGAAATTCATCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNEEGPY*KFISQK
Trigger: TTTCTGGCTGATGAATTTGCAATAGGGGCCTTCCTC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTATATCTTCGGGAAGGTTaGTCCTCTGAACGATGGTTG +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLYLREG*SSERWL
Trigger: CAACCATCGTTCAGAGGAGCAACCTTCCCGAAGATA...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCCTGGAAAACCTCGAATaGCATCAGCATTTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSLENLE*HQHLGV
Trigger: TACTCCTAAATGCTGATGGCATTCGAGGTTTTCCAG...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTGGACTGCATCCTTTATaGTGCTCAAATCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLGLHPL*CSNRPH
Trigger: ATGTGGACGATTTGAGCAGCATAAAGGATGCAGTCC...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCTGGTACATCTTTGTTaGAGTAACTATAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLVHLC*SNYSTD
Trigger: ATCAGTGCTATAGTTACTGCAACAAAGATGTACCAG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGAGAAACATGGCACTTaGGTGAAAGGTCCTATCCTT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIEKHGT*VKGPIL
Trigger: AAGGATAGGACCTTTCACGCAAGTGCCATGTTTCTC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTGCCTTCACATGGCTTaGCATTGTATAAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNCLHMA*HCISKG
Trigger: ACCCTTGCTTATACAATGCCAAGCCATGTGAAGGCA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTTCTATAAAAACTTCTaGAGGACTCTCCTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFFYKNF*RTLLVE
Trigger: CTCAACAAGGAGAGTCCTCCAGAAGTTTTTATAGAA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCCCACTTTTATAGCTTaGTTGGAAAATGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCPTFIA*LENAFY
Trigger: ATAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACATTTCCAAACAGGGTTaGCAGAGGCAAAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNISKQG*QRQSGD
Trigger: ATCACCACTTTGCCTCTGCCAACCCTGTTTGGAAAT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCCTGTATCCCTGTTTaGATGGTTAGCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPCIPV*MVSLSF
Trigger: GAAAGAAAGGCTAACCATCCAAACAGGGATACAGGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTTGTCACATCTTGCGTaGGAAGACAAGACAGTGCAT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILSHLA*EDKTVH
Trigger: ATGCACTGTCTTGTCTTCCCACGCAAGATGTGACAA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTTGGAGACTACAGCGTaGTGTTCAAAGGCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILETTA*CSKAFS
Trigger: GCTAAAAGCCTTTGAACACCACGCTGTAGTCTCCAA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAATAGGATTGGCACCATaGTTACTTCCTGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLIGLAP*LLPGPC
Trigger: ACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTCTCCACCGTGTAAATaGTACAACAGATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSSPPCK*YNRSLF
Trigger: AAAGAGAGATCTGTTGTATCATTTACACGGTGGAGA...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCTAGAATCATGTTCATaGCAGTTGATGGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILESCS*QLMGPQ
Trigger: TTGAGGACCCATCAACTGTCATGAACATGATTCTAG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCACTTTGCTTTGTGACTaGAGAACCGAATACAGGTCA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLTLLCD*RTEYRS
Trigger: TGACCTGTATTCGGTTCTTCAGTCACAAAGCAAAGT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCAAAGAAATGAGTTATaGCGAACACATTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: NMGICFGGVFLLETTAWCQRNEL*RTHSQC
Trigger: ACATTGAGAATGTGTTCGGCATAACTCATTTCTTTG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTTTCCCAGCACAGAGTaGAGGGAGATACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNFPSTE*REIQRN
Trigger: ATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTTTCCCAGCACAGAGTaGAGGGAGATACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIFPSTE*REIQRN
Trigger: ATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAAAAATCCAAAAAGCTaGTTCTGCGAAGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLKNPKS*FCEAAS
Trigger: GGAAGCTGCTTCGCAGAAGCAGCTTTTTGGATTTTT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTGGTTTTCAATCTTGTaGTCTACTTGGGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLWFSIL*STWASS
Trigger: AGAACTGGCCCAAGTAGAGCACAAGATTGAAAACCA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTACACATTTGAGCAGTTaGTGGATCTCACTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNITHLSS*WISLYF
Trigger: GAAGTACAGTGAGATCCAGCAACTGCTCAAATGTGT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCCCACTTTTATAGCTTaGTTGGAAAATGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVPTFIA*LENAFY
Trigger: ATAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCATTTGAGCAGTTGCTaGATCTCACTGTACTTCTCT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLHLSSC*ISLYFS
Trigger: AGAGAAGTACAGTGAGATCCAGCAACTGCTCAAATG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGAGAAGGACATTTCCTaGGAGATGGATACGTTCTAT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIEKDIS*EMDTFY
Trigger: ATAGAACGTATCCATCTCCCAGGAAATGTCCTTCTC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGAGAAGGACATTTCCTaGGAGATGGATACGTTCTAT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNEKDIS*EMDTFY
Trigger: ATAGAACGTATCCATCTCCCAGGAAATGTCCTTCTC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCTCCACCGTGTAAATaGTACAACAGATCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSPPCK*YNRSLF
Trigger: AAAGAGAGATCTGTTGTATCATTTACACGGTGGAGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCATTTTCCTCCTCTTTaGGATCCAAAATCCATTCCA +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNHFPPL*DPKSIP
Trigger: TGGAATGGATTTTGGATCTCAAAGAGGAGGAAAATG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCCCAGTTCTGTATATaGCTTTGCTTTGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISQFCI*LCFVTE
Trigger: TTCAGTCACAAAGCAAAGTCATATACAGAACTGGGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCAGTCATCTTCTTTCTaGAGAATGTGGTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLQSSSF*RMWFSS
Trigger: GGAAGAAAACCACATTCTTCAGAAAGAAGATGACTG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTATTTCCCAGCACAGAGTaGAGGGAGATACAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLFPSTE*REIQRN
Trigger: ATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAA...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTCATTTGTTCAGAAATaGTTGGGCGTAAACATCAGC +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLSFVQK*LGVNIS
Trigger: GCTGATGTTTACGCCCAAGCATTTCTGAACAAATGA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTTTAGGCCCCACATTTaGAAATTGAAGTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNFRPHI*KLKSLS
Trigger: ACTCAGTGACTTCAATTTGCAAATGTGGGGCCTAAA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAA +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLSGMSP*RSSDNK
Trigger: TTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAATTTTAGAGAAACATaGCACTTGCGTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNINFRET*HLRERS
Trigger: GGACCTTTCACGCAAGTGCCATGTTTCTCTAAAATT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTACATTTCCTGGGAGATaGATACGTTCTATGACTCAA +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNITFPGR*IRSMTQ
Trigger: TTGAGTCATAGAACGTATCCATCTCCCAGGAAATGT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR TCA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAGGAGATACAAAGAAATaGGTTATGCCGAACACATTC +
Preference number: 4 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLGDTKK*VMPNTF
Trigger: GAATGTGTTCGGCATAACTCATTTCTTTGTATCTCC...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR GCA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTGGTACATCTTTGTTaGAGTAACTATAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLVHLC*SNYSTD
Trigger: ATCAGTGCTATAGTTACTGCAACAAAGATGTACCAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CCA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCCCACTTTTATAGCTTaGTTGGAAAATGCCTTCTAT +
Preference number: 4 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIPTFIA*LENAFY
Trigger: ATAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR GCA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCAAAGAAATGAGTTATaGCGAACACATTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLQRNEL*RTHSQC
Trigger: ACATTGAGAATGTGTTCGGCATAACTCATTTCTTTG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTCCAGCTCTCCCTCCTaGGATTTCCGTCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPSSSPS*DFRQAR
Trigger: ACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGA...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS TCA 90 bp ATCTTCACTTCCAGAATGCGCAGTGCACCCAGGCGTCGTCCGCTCTaGGCTGGTCCGGCACTCCTCCCTGCTCTGCCTGCTCTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: IFTSRMRSAPRRRPL*AGPALLPALPALAA
Trigger: AGCCGCCAGAGCAGGCAGAGCAGGGAGGAGTGCCGGACCAGCTCAGAGCGGACGACGCCTGGGTGCACTGCGCATTCTGGAAGTGAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS-3UTR CAA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGAGGGTCAGCAGAATCTaGGATCCCACATACAGCGCC +
Preference number: 5 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPRVSRI*DPTYSA
Trigger: GGCGCTGTATGTGGGATCCAAGATTCTGCTGACCCT...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS TCA 90 bp CCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTaGCGTGTGGCAGGCTGGTATCTTCGGGAAGGTTGCTCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PAWLLLVRRPRRRLG*RVAGWYLREGCSSE
Trigger: TTCAGAGGAGCAACCTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557366.5
ENST00000557407.1
CDS GCA 90 bp GCCAGTACCGTCATCCTCCTCAAGCAGGAGCTCCAGCAGGGCCTGTaGTGGCTGGGGAGACTGCCTCAGGAGATCCCAGAGCACAGAGAC +
Preference number: 5 (lower is better)
Translates to: ASTVILLKQELQQGL*WLGRLPQEIPEHRD
Trigger: GTCTCTGTGCTCTGGGATCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCTGCTGGAGCTCCTGCTTGAGGAGGATGACGGTACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS GCA 90 bp ACGGTAGAAAGACTGGCCCAACCACAGAGATTCACTGCCAGACTCTaGCCCTGCTGCAAAGACCCTCGCAGGGGCTCCCAGGCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: TVERLAQPQRFTARL*PCCKDPRRGSQAAR
Trigger: CCTGGCTGCCTGGGAGCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGTTGGGCCAGTCTTTCTACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS CCA 90 bp AGTACCGTCATCCTCCTCAAGCAGGAGCTCCAGCAGGGCCTGTGCTaGCTGGGGAGACTGCCTCAGGAGATCCCAGAGCACAGAGACAGC +
Preference number: 5 (lower is better)
Translates to: STVILLKQELQQGLC*LGRLPQEIPEHRDS
Trigger: GCTGTCTCTGTGCTCTGGGATCTCCTGAGGCAGTCTCCCCAGCCAGCACAGGCCCTGCTGGAGCTCCTGCTTGAGGAGGATGACGGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CCA 90 bp GATTACCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTaGGGTGACGTGTGGCAGGCTGGTATCTTCGGGAAGGTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: DYLPGSFLSDDPGGD*GDVWQAGIFGKVAP
Trigger: AGGAGCAACCTTCCCGAAGATACCAGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGGTAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557366.5
ENST00000557407.1
CDS-3UTR CAA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGTCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPSSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS GCA 90 bp GACTACCCCAGGGGGCACCGAATCAGGGCCCTGCAAAGCCCGCAATaGCTTTCGAATGAGGTCCACCAGTGCATTCTGCAGAGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: DYPRGHRIRALQSPQ*LSNEVHQCILQRPV
Trigger: CACTGGCCTCTGCAGAATGCACTGGTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGTGCCCCCTGGGGTAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS GCA 90 bp AACAGAGGGAATTGTTCCAGAAGGCGCTCACACTCCCGGGCTACCTaGTCTGCAGCCAGAGGCACCTCCCTGCGGCCACGAAGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: NRGNCSRRRSHSRAT*SAARGTSLRPRSSF
Trigger: GAAGGAACTTCGTGGCCGCAGGGAGGTGCCTCTGGCTGCAGAGCAGGTAGCCCGGGAGTGTGAGCGCCTTCTGGAACAATTCCCTCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS GCA 90 bp GCCCAGGAGAACGGTAGAAAGACTGGCCCAACCACAGAGATTCACTaGCAGACTCTGCCCCTGCTGCAAAGACCCTCGCAGGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: AQENGRKTGPTTEIH*QTLPLLQRPSQGLP
Trigger: TGGGAGCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGTTGGGCCAGTCTTTCTACCGTTCTCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTGAACCTCTGTCTCGGCCATCTGCCTGGCTCCTTCTTGTCCGACGACCCCGGCGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LNLCLGHLPGSFLSDDPGDPGYS*RVDVLP
Trigger: GGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTC...GCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGATGGCCGAGACAGAGGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAAACTGCATCAGGCTCTaGCTGGGGGTCCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQNCIRL*LGVLGW
Trigger: CCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGTT...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GGCTCCTTCTTGTCCGACGACCCCGGCGGAGACTGGGGTGACGTGTGGCAGGCTCTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: GSFLSDDPGGDWGDVWQALPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...AGCCTGCCACACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAACTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQLPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp ATCCCCGCTGCTCTTGGCGGCCTGCTGCACCTGCTGGACAAGGGCTGTGGCCCGGACTCACTGACACATTaGAGCAGTTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: IPAALGGLLHLLDKGCGPDSLTH*SSCWIS
Trigger: TGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTC...CGGGCCACAGCCCTTGTCCAGCAGGTGCAGCAGGCCGCCAAGAGCAGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGCACCCCGGGGGTGGCTaGTCAGAAGCCACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQHPGGG*SEATGH
Trigger: GTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTG...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TGGCTGACTCTAGGCTCTGGCAGTGTGTCCAGCCCAGGAGTACAAGCAGGCAACCAAGCCTCGGCTGGGTaGGGATTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: WLTLGSGSVSSPGVQAGNQASAG*GLENRA
Trigger: AGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTG...GTTGCCTGCTTGTACTCCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp CTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTGCCAGTTCTCCTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 5 (lower is better)
Translates to: LLQRCQWPVELSGHCQFSYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...GGAGAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCACCCCGGGGGTGGCTaGTCAGAAGCCACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLHPGGG*SEATGH
Trigger: GTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCACCCCGGGGGTGGCTaGTCAGAAGCCACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSHPGGG*SEATGH
Trigger: GTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS TCA 90 bp GAGACTGCCTCAGGAGATCCCAGAGCACAGAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCTCCCTCCTTGGATTTCCGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: ETASGDPRAQRQLRS*DEESSSPSLDFRQA
Trigger: TGCCTGACGGAAATCCAAGGAGGGAGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCTCTGTGCTCTGGGATCTCCTGAGGCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLILPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAQWPVE*SGHCQF
Trigger: GAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTG...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGGGAGTGATGAGTCCCTaGGGGAGGAGTAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWGVMSP*GRSRAF
Trigger: GAAAGCCCTACTCCTCCCCAAGGGACTCATCACTCC...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGGGTTGGTGAGGCCCTaGGAGAGCCTGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLGLVRP*ESLQQC
Trigger: GCACTGCTGCAGGCTCTCCAAGGGCCTCACCAACCC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGGGGTTGGTGAGGCCCTaGGAGAGCCTGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMGLVRP*ESLQQC
Trigger: GCACTGCTGCAGGCTCTCCAAGGGCCTCACCAACCC...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGGGTTGGTGAGGCCCTaGGAGAGCCTGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHGLVRP*ESLQQC
Trigger: GCACTGCTGCAGGCTCTCCAAGGGCCTCACCAACCC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGGTGTGTTCATGTGCCTaGACACATCAGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: CWERVVWLATQSSLRLGQVCSCA*THQLQS
Trigger: TGACTGCAGCTGATGTGTCAAGGCACATGAACACAC...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGGGGCGGAATTCTCTaGAACGCTTCCAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQWGGIL*NASRQL
Trigger: CAACTGCCTGGAAGCGTTCAAGAGAATTCCGCCCCA...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TGCTGGGAGAGGGTGGTGTGGCTGGCAACACAGTCCTCGCTTAGGCTGGGCCAGTATTGCCAACCTTCTTaGTCTGCTCTGCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: CWERVVWLATQSSLRLGQYCQPS*SALQPE
Trigger: CTCTGGCTGCAGAGCAGACAAAGAAGGTTGGCAATA...CTGGCCCAGCCTAAGCGAGGACTGTGTTGCCAGCCACACCACCCTCTCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS TCA 90 bp GGTGCTTCCTTCTGGGTGCCATTTGCTGAGGTCCACATGGTGATCTaGGCTACAGAGCTGCCACTGCCTGGACTCAGGGAGTTAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GASFWVPFAEVHMVI*ATELPLPGLRELGL
Trigger: CAGCCCTAACTCCCTGAGTCCAGGCAGTGGCAGCTCTGTAGCTCAGATCACCATGTGGACCTCAGCAAATGGCACCCAGAAGGAAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 90 bp AGACGAGGAGTCCAGCTCTCCCTCCTTGGATTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTTAAGGTCTCATACAGCTCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RRGVQLSLLGFPSGT*PTAPCVKVSYSSSR
Trigger: CCTCGAGGAGCTGTATGAGACCTTAACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGACTCCTCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCTCCAGCTCTCCCTCCTaGGATTTCCGTCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQASSSPS*DFRQAR
Trigger: ACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGA...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTAACTGCATCAGGCTCTaGCTGGGGGTCCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLNCIRL*LGVLGW
Trigger: CCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGTT...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHYLGQF*DHFLVA
Trigger: CGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGCATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQHDKLG*LTFNLG
Trigger: CCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATG...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp GCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCGGGTTGGTGAGGCCCTaGGAGAGCCTGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: APWLLPGPCSNNSEWTSSGLVRP*ESLQQC
Trigger: GCACTGCTGCAGGCTCTCCAAGGGCCTCACCAACCC...GCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: GSSPQCHHPQHSPQASEASPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS TCA 90 bp AATGCCTTTCGAATGAGGTCCACCAGTGCATTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCATCCTCCTCAAGCAGGAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: NAFRMRSTSAFCRGQ*QRPVPSSSSSRSSS
Trigger: GCTGGAGCTCCTGCTTGAGGAGGATGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAATGCACTGGTGGACCTCATTCGAAAGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS TCA 90 bp AAGGCAGGCACTGCCTTTTTGAGCTGTGTCCATGTCCCACCTTGTTaGGAAGGTGCAGAAGAGCTTCCCGCAGGCAGCTGTGCCTCACGT +
Preference number: 5 (lower is better)
Translates to: KAGTAFLSCVHVPPC*EGAEELPAGSCASR
Trigger: ACGTGAGGCACAGCTGCCTGCGGGAAGCTCTTCTGCACCTTCTCAACAAGGTGGGACATGGACACAGCTCAAAAAGGCAGTGCCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTTCCAGCTCTCCCTCCTaGGATTTCCGTCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLSSSPS*DFRQAR
Trigger: ACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGA...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGRTGLA*PAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCT...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCAAGCCTCGGCTGGGTaGGGATTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEQASAG*GLENRA
Trigger: AGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAACTGCATCAGGCTCTaGCTGGGGGTCCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLENCIRL*LGVLGW
Trigger: CCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGTT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATTCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDSERLS*QSWHWE
Trigger: CTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGA...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQTWPGK*RRDLQH
Trigger: GTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGT...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQALIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TGGCTGACTCTAGGCTCTGGCAGTGTGTCCAGCCCAGGAGTACAAGCAGGCAACGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: WLTLGSGSVSSPGVQAGNAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...GTTGCCTGCTTGTACTCCTGGGCTGGACACACTGCCAGAGCCTAGAGTCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp TCTATCCGTCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SIRRPRLSRLLFKRRSAVASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...GACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGACGGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RWLLVTTLCLHWASETTLASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLLPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CCGGCCACAGCGGCGACAATGATGACGCCTGTTAAACATGGTGAAGTGCTCCCTGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PATAATMMTPVKHGEVLPVLVEG*LCHFKA
Trigger: TGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCAC...AGGGAGCACTTCACCATGTTTAACAGGCGTCATCATTGTCGCCGCTGTGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCCTGTGAGGGCTGGGTaGGTGGGAAACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSPVRAG*VGNSFP
Trigger: GGGAAAGGAGTTTCCCACCAACCCAGCCCTCACAGG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTGAATCACAGTGGCTCTGGCCGGCTTaGACGAACATCATCTTGGCG +
Preference number: 5 (lower is better)
Translates to: GGSRDLQPGGQFLGGESQWLWPA*TNIILA
Trigger: CGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCA...CTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCACAAAGAGCCAAGTCTaGGCTCTGGCCGGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCTKSQV*ALAGFD
Trigger: GTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTGT...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCGACCTCAACGCCCAGTaGGTAGTACTCGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: KFPRRMQDASSDSGGENIDLNAQ*VVLGFQ
Trigger: TTGGAAGCCGAGTACTACCAACTGGGCGTTGAGGTC...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTCTGGAGGACTCTCCTaGTTGAGAAGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: QHLMGFCEVPAKDAGCQQSGGLS*LRRCRR
Trigger: TCTTCTGCACCTTCTCAACAAGGAGAGTCCTCCAGA...CTGCTGGCATCCTGCATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCATGGCGGCCCGAACTaGGTCCTTCATAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFHGGPN*VLHKLL
Trigger: CAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCATG...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp GGCTCTTCCCCTCAATGTCATCATCCTCAGCATAGTCCTCAGGCAAGTGAGGCTAACGCTTCCAGGCAGTaGAGGAGGATGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: GSSPQCHHPQHSPQASEANASRQ*RRMVSP
Trigger: CGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT...AGCCTCACTTGCCTGAGGACTATGCTGAGGATGATGACATTGAGGGGAAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAACGCTTCCAGGCAGTaGAGGAGGATGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHNASRQ*RRMVSP
Trigger: CGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAACGCTTCCAGGCAGTaGAGGAGGATGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLNASRQ*RRMVSP
Trigger: CGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCGTCCCCTGTTTTGACTaGACTCTGCTAGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: TIPGQVGRRVEADSKQYAVPCFD*TLLEMA
Trigger: GGCCATCTCTAGCAGAGTCAAGTCAAAACAGGGGAC...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTGGACACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAAGGTGAGGGCAGTGATTaGGGATCTAGGCTAAGACTT +
Preference number: 5 (lower is better)
Translates to: LDTIPGQVGRRVEADSKQGEGSD*GSRLRL
Trigger: AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACC...TTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CAGGGACGAGTTCTTTGGCCCCTGAGGAGAGGTTCATTCTGGAGACCGAGACATACAGGGACGAGTTCTTaGGCCCCTGAGGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: QGRVLWPLRRGSFWRPRHTGTSS*APEERF
Trigger: GAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTGT...ATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS TCA 90 bp CCTTTATGCTGCTCAAATCGTCCACATCTCGCCCGTACACTTCAGTaGGCTGAAGGGCCCGGGACCAATCTCTGGCCACCAAGGATTCCT +
Preference number: 5 (lower is better)
Translates to: PLCCSNRPHLARTLQ*AEGPGTNLWPPRIP
Trigger: AGGAATCCTTGGTGGCCAGAGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGCGAGATGTGGACGATTTGAGCAGCATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS CCA 90 bp GGCAGTAGAAATAGGCCACTTTCCAAGCCTCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTGCCCGCTCAGGATCTAGATGATCCG +
Preference number: 5 (lower is better)
Translates to: GSRNRPLSKPRLGWD*RTGLALPAQDLDDP
Trigger: CGGATCATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAAGTGGCCTATTTCTACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LESSESTSSIVKPISCPTDPGYS*RVDVLP
Trigger: GGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTC...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTCCAGCTCTCCCTCCTaGGATTTCCGTCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSSSPS*DFRQAR
Trigger: ACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACTGGGCCTCAGAGACAACCTTGGAAAGTCGATGCAGGCGGCTCTGCAGTCCACTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: HWASETTLESRCRRLCSPLPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...TGGACTGCAGAGCCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: LTLSISFQRHALNHYPILLPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCTACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: KFPRRMQDASSDSGGENIYLGQF*DHFLVA
Trigger: CGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSQWPVE*SGHCQF
Trigger: GAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGGAGTGATGAGTCCCTaGGGGAGGAGTAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEGVMSP*GRSRAF
Trigger: GAAAGCCCTACTCCTCCCCAAGGGACTCATCACTCC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACCATCCCAGGCCAGGTAGGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCTCAAACAGAGGGAATaGTTCCAGAAGGCGCTCACA +
Preference number: 5 (lower is better)
Translates to: TIPGQVGRRVEADSKQYALKQRE*FQKALT
Trigger: TGTGAGCGCCTTCTGGAACAATTCCCTCTGTTTGAG...GGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCCTACCTGGCCTGGGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGGATTCTTCGCAGGAGTaGCAGAGCCTTGTCATGATC +
Preference number: 5 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWDSSQE*QSLVMI
Trigger: GATCATGACAAGGCTCTGCAACTCCTGCGAAGAATC...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACCTGTGAGGGCTGGGTaGGTGGGAAACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGPVRAG*VGNSFP
Trigger: GGGAAAGGAGTTTCCCACCAACCCAGCCCTCACAGG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGGCTCTGGCCGGCTTaGACGAACATCATCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHWLWPA*TNIILA
Trigger: CGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFVRFPA*RQAMPQ
Trigger: TTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCAC...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTGCTGCGGGATGTTTCTaGGAGGTAGATCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFAAGCF*EVDLQV
Trigger: CACCTGAAGATCTACCTCCAAGAAACATCCCGCAGC...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp ATCATCTTGGCGCTGAACAGCAGCTGCTTCATGATGTCCGTGAGCAGCCCGGCACCTCCCAGCATGACCTaGCAGGCAACATCCATTTTC +
Preference number: 5 (lower is better)
Translates to: IILALNSSCFMMSVSSPAPPSMT*QATSIF
Trigger: GAAAATGGATGTTGCCTGCAAGGTCATGCTGGGAGG...TGCCGGGCTGCTCACGGACATCATGAAGCAGCTGCTGTTCAGCGCCAAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGTGTCCCCGTCACTTTaGGCTGCCATGCCTGACTCA +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLVSPSL*AAMPDS
Trigger: TGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACAC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGAACGCTTCCAGGCAGTaGAGGAGGATGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LLWEPQSISPPKDGGEVRNASRQ*RRMVSP
Trigger: CGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT...CCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp CAGGGACGAGTTCTTTGGCCCCTGAGGAGAGGTTCATTCTGGAGACCGAGACATTGGGGCGGAATTCTCTaGAACGCTTCCAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QGRVLWPLRRGSFWRPRHWGGIL*NASRQL
Trigger: CAACTGCCTGGAAGCGTTCAAGAGAATTCCGCCCCA...ATGTCTCGGTCTCCAGAATGAACCTCTCCTCAGGGGCCAAAGAACTCGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWCHHCV*PGSGPP
Trigger: TGGAGGGCCTGATCCAGGCAATACACAATGATGACA...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS TCA 90 bp ATGCTGCTCAAATCGTCCACATCTCGCCCGTACACTTCAGTGAGCTaGAGGGCCCGGGACCAATCTCTGGCCACCAAGGATTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: MLLKSSTSRPYTSVS*RARDQSLATKDSSK
Trigger: TTTTGAGGAATCCTTGGTGGCCAGAGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGCGAGATGTGGACGATTTGAGCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS TCA 90 bp TGCTCAGCTTTAAACCTAGGGTGCTTCCTTCTGGGTGCCATTTGCTaGGGTCCACATGGTGATCTGAGCTACAGAGCTGCCACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: CSALNLGCFLLGAIC*GPHGDLSYRAATAW
Trigger: CCAGGCAGTGGCAGCTCTGTAGCTCAGATCACCATGTGGACCTCAGCAAATGGCACCCAGAAGGAAGCACCCTAGGTTTAAAGCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 90 bp AGGTGCCGGACTCGCTGGGCTGTTCATCCTGAGAAGCTGAGTTTGTaGCTGATGATGCAATCCAGGTTTGGGTTGGGCCTGCAAACAGAA +
Preference number: 5 (lower is better)
Translates to: RCRTRWAVHPEKLSL*LMMQSRFGLGLQTE
Trigger: TTCTGTTTGCAGGCCCAACCCAAACCTGGATTGCATCATCAGGCACAAACTCAGCTTCTCAGGATGAACAGCCCAGCGAGTCCGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 90 bp TGCTCAGGCAGTAGAAATAGGCCACTTTCCAAGCCTCGGCTGGGTTaGGATTGGAGAACAGGGCTAGCATTGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: CSGSRNRPLSKPRLG*DWRTGLALPAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAAGTGGCCTATTTCTACTGCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTCCAGCTCTCCCTCCTaGGATTTCCGTCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSSSPS*DFRQAR
Trigger: ACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAAACTGCATCAGGCTCTaGCTGGGGGTCCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTNCIRL*LGVLGW
Trigger: CCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGTT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGGACACCATCCCAGGCCACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: NNSEWTSSWVRSWTPSQATWPGK*RRDLQH
Trigger: GTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGT...GGCCTGGGATGGTGTCCAGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 5 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACATATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 5 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACACTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: SERWLLVTTLCLHWASETLIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: FLALVVTTLNGPAAGSEAASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp ACACCATTCCTGCTGCTGCAGCGCTGCCAATGGCCTGTAGAGTTGAGCGGCCACTTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: TPFLLLQRCQWPVELSGHFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...GTGGCCGCTCAACTCTACAGGCCATTGGCAGCGCTGCAGCAGCAGGAATGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGCAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLQWPVE*SGHCQF
Trigger: GAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTG...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AAAGTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACGAGGTGTTGAGCAGCTaGTCAGTCACGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: KVDAGGSAVHLCFLSSSDEVLSS*SVTSEI
Trigger: TATCTCTGACGTGACTGACAAGCTGCTCAACACCTC...GTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCGAGGTGTTGAGCAGCTaGTCAGTCACGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: KFPRRMQDASSDSGGENIEVLSS*SVTSEI
Trigger: TATCTCTGACGTGACTGACAAGCTGCTCAACACCTC...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: ILHGTEALVECQVLTLAQGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp AGACCATGCAGATACTCTCAGTCTCATCCGGTACCCACTGGTGCCTGGCAGGGGTTGGGAAGAGCTCTGTaGCAGCAGAACAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: RPCRYSQSHPVPTGAWQGLGRAL*QQNKGI
Trigger: AATCCCTTTGTTCTGCTGCAACAGAGCTCTTCCCAA...CCCCTGCCAGGCACCAGTGGGTACCGGATGAGACTGAGAGTATCTGCATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGAGTGATGAGTCCCTaGGGGAGGAGTAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGVMSP*GRSRAF
Trigger: GAAAGCCCTACTCCTCCCCAAGGGACTCATCACTCC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLVLVEG*LCHFKA
Trigger: TGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCAC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEVLVEG*LCHFKA
Trigger: TGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCAC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAATCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQSDSSQ*SIEVGG
Trigger: ACCACCCACTTCTATGGACAACTGACTGCTGTCCGA...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGAGGGTCAGCAGAATCTaGGATCCCACATACAGCGCC +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLERVSRI*DPTYSA
Trigger: GGCGCTGTATGTGGGATCCAAGATTCTGCTGACCCT...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGGGTCAGCAGAATCTaGGATCCCACATACAGCGCC +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHRVSRI*DPTYSA
Trigger: GGCGCTGTATGTGGGATCCAAGATTCTGCTGACCCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCCTGTGAGGGCTGGGTaGGTGGGAAACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYPVRAG*VGNSFP
Trigger: GGGAAAGGAGTTTCCCACCAACCCAGCCCTCACAGG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AAGTTCCCGCGAAGGATGCAGGATGCCAGCAGTGACTCAGGTGGGGAGAACATCGGAGGGCTTTCATTCTaGGAGCTGTCTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: KFPRRMQDASSDSGGENIGGLSF*ELSRAS
Trigger: AGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTCC...GATGTTCTCCCCACCTGAGTCACTGCTGGCATCCTGCATCCTTCGCGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGGGTTGGTGAGGCCCTaGGAGAGCCTGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRGLVRP*ESLQQC
Trigger: GCACTGCTGCAGGCTCTCCAAGGGCCTCACCAACCC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTGGCTCTGGCCGGCTTaGACGAACATCATCTTGGCG +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIWLWPA*TNIILA
Trigger: CGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTACAAAGAGCCAAGTCTaGGCTCTGGCCGGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLTKSQV*ALAGFD
Trigger: GTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTGT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGACCTCAACGCCCAGTaGGTAGTACTCGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHDLNAQ*VVLGFQ
Trigger: TTGGAAGCCGAGTACTACCAACTGGGCGTTGAGGTC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDVRFPA*RQAMPQ
Trigger: TTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCAC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATCATCCTGCACCAGCCTaGAGCCATGATTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDHPAPA*SHDSAD
Trigger: ATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGATG...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCATGGCGGCCCGAACTaGGTCCTTCATAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLHGGPN*VLHKLL
Trigger: CAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCATG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGGTGTCCCCGTCACTTTaGGCTGCCATGCCTGACTCA +
Preference number: 5 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLVSPSL*AAMPDS
Trigger: TGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACAC...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTGGGGCGGAATTCTCTaGAACGCTTCCAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLWGGIL*NASRQL
Trigger: CAACTGCCTGGAAGCGTTCAAGAGAATTCCGCCCCA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCACCCCGGGGGTGGCTaGTCAGAAGCCACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQHPGGG*SEATGH
Trigger: GTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGCCTTTCTTTCCCTCTaGCCCGTGTTAGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHAFLSL*PVLASQ
Trigger: CTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGCCTTTCTTTCCCTCTaGCCCGTGTTAGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLAFLSL*PVLASQ
Trigger: CTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLDPGYS*RVDVLP
Trigger: GGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTCCAGCTCTCCCTCCTaGGATTTCCGTCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLSSSPS*DFRQAR
Trigger: ACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLRTGLA*PAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHRTGLA*PAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSERLS*QSWHWE
Trigger: CTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLILIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAAACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: NTTAPQGLPVTPHWGRLQTDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...TTGCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LESSESTSSIVKPISCPTAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: APWLLPGPCSNNSEWTSSLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...GCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 5 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHYLGQF*DHFLVA
Trigger: CGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCNLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTQWPVE*SGHCQF
Trigger: GAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTCGATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTCAGAGCTCAAACTTaGAAGGAGAACTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: VDAGGSAVHLCFLSSSDFLRAQT*KENCSK
Trigger: CTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGAG...AAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEHDKLG*LTFNLG
Trigger: CCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCCACCTCATCTGCTTaGGGGACTCTCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESTSSA*GTLTTN
Trigger: GTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGGGTTGGTGAGGCCCTaGGAGAGCCTGCAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFGLVRP*ESLQQC
Trigger: GCACTGCTGCAGGCTCTCCAAGGGCCTCACCAACCC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACAAAGAGCCAAGTCTaGGCTCTGGCCGGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITKSQV*ALAGFD
Trigger: GTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGACCTCAACGCCCAGTaGGTAGTACTCGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIDLNAQ*VVLGFQ
Trigger: TTGGAAGCCGAGTACTACCAACTGGGCGTTGAGGTC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGACCTCAACGCCCAGTaGGTAGTACTCGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLDLNAQ*VVLGFQ
Trigger: TTGGAAGCCGAGTACTACCAACTGGGCGTTGAGGTC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCCATGGCGGCCCGAACTaGGTCCTTCATAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: WEPQSISPPKDGGEVRDFHGGPN*VLHKLL
Trigger: CAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCATG...GAAATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp GATGCAGGCGGCTCTGCAGTCCATCTCTGCTTCCTGAGCAGCTCTGACTTTCTTATCTTCAGGTGGTCCTaGGCCTTAAGTAGCCATGAG +
Preference number: 5 (lower is better)
Translates to: DAGGSAVHLCFLSSSDFLIFRWS*ALSSHE
Trigger: CTCATGGCTACTTAAGGCCAAGGACCACCTGAAGAT...AAGAAAGTCAGAGCTGCTCAGGAAGCAGAGATGGACTGCAGAGCCGCCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCTGGGCACAGATGTCTaGCACTACTGCATCCCCGCT +
Preference number: 5 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYLGTDV*HYCIPA
Trigger: AGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGGCAATGCTGTCCCGGTGCAGATTCAGGATGGCAATGCACAAGGAGGCGCTGGTTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 5 (lower is better)
Translates to: RQCCPGADSGWQCTRRRWFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...CCAGCGCCTCCTTGTGCATTGCCATCCTGAATCTGCACCGGGACAGCATTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGATGGCATCACCAGCGTTaGGAGACAATTCCGCTCACC +
Preference number: 5 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRWHHQR*ETIPLT
Trigger: GGTGAGCGGAATTGTCTCCAAACGCTGGTGATGCCA...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS TCA 90 bp GCCAACCATTTCTCCAGTACAAGAAGCCAGACCCAGGCTACTCTTTaGGGGTTGATGTCCTGCCCACATCTCAGCAGATTTGGACACACC +
Preference number: 5 (lower is better)
Translates to: ANHFSSTRSQTQATL*GLMSCPHLSRFGHT
Trigger: GGTGTGTCCAAATCTGCTGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTCTGGCTTCTTGTACTGGAGAAATGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS GCA 90 bp CTGACACTGTTAGCTGAATTTCCACTGATTCTTTTCCCAGGTCATTaGTATTCCTGGGTCTCCCTCCCTGAGCCAGGCACTCTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: LTLLAEFPLILFPGH*YSWVSLPEPGTLPA
Trigger: GGCAGGAAGAGTGCCTGGCTCAGGGAGGGAGACCCAGGAATAGCAATGACCTGGGAAAAGAATCAGTGGAAATTCAGCTAACAGTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554523.5
CDS GCA 90 bp GGTGACGAGGGAAACTCAGAATCTGCTCGAGGAAGTGTTTGTTGTTaGTCAGGCAGTAGAAATAGGCCACTTTCCAAGCCTCGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GDEGNSESARGSVCC*SGSRNRPLSKPRLG
Trigger: ACCCAGCCGAGGCTTGGAAAGTGGCCTATTTCTACTGCCTGAGCAACAACAAACACTTCCTCGAGCAGATTCTGAGTTTCCCTCGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS CCA 90 bp ACTCTTCCTGCCTTGCTCTTACCAAGGATACAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCACATCCTGCACCAGCCTTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: TLPALLLPRIQRASL*TLGTQPHPAPALSH
Trigger: ATGGCTCAAGGCTGGTGCAGGATGTGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTGTATCCTTGGTAAGAGCAAGGCAGGAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554523.5
CDS-3UTR CAA 90 bp AACTTTGAGGATGGGGGTGCAATCTACTGTGCAGCTCATTCCGGCCAGACATGGTGTCTTCTACCCTCTTaGGGATATCCCCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: NFEDGGAIYCAAHSGQTWCLLPS*GYPLVP
Trigger: AGGGACAAGGGGATATCCCAAAGAGGGTAGAAGACA...CCATGTCTGGCCGGAATGAGCTGCACAGTAGATTGCACCCCCATCCTCAAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGCACATCTCAGCAGATTaGGACACACCACCAATGCCT +
Preference number: 5 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMHISAD*DTPPMP
Trigger: AGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTG...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGRTGLA*PAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLRTGLA*PAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCT...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCAAGCCTCGGCTGGGTaGGGATTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRQASAG*GLENRA
Trigger: AGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTG...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGTCTGGAGCAGCCTCTaGGCTGACTCTAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTVWSSL*ADSRLW
Trigger: CCAGAGCCTAGAGTCAGCCAAGAGGCTGCTCCAGAC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGAACTGCATCAGGCTCTaGCTGGGGGTCCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRNCIRL*LGVLGW
Trigger: CCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGTT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDSERLS*QSWHWE
Trigger: CTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHTWPGK*RRDLQH
Trigger: GTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACACTGCACAGATACTGTaGACACCTGGCCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHTAQIL*TPGQVS
Trigger: ACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTCTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYLIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHTDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTCTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCLNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FLALVVTTLNGPAAGSEALNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDQWPVE*SGHCQF
Trigger: GAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGAGGTGTTGAGCAGCTaGTCAGTCACGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLEVLSS*SVTSEI
Trigger: TATCTCTGACGTGACTGACAAGCTGCTCAACACCTC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCTCTCTCTGGGGGAACTaGTCTCTCAAACAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSSLWGN*SLKQEM
Trigger: CATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAGA...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCTCTCTGGGGGAACTaGTCTCTCAAACAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSLWGN*SLKQEM
Trigger: CATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACATCTCTCTGGGGGAACTaGTCTCTCAAACAGGAGATG +
Preference number: 5 (lower is better)
Translates to: RRVEADSKQYAQGHTRLTSLWGN*SLKQEM
Trigger: CATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAGA...TGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCTCAAACAGAGGGAATaGTTCCAGAAGGCGCTCACA +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLELKQRE*FQKALT
Trigger: TGTGAGCGCCTTCTGGAACAATTCCCTCTGTTTGAG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGATTCTTCGCAGGAGTaGCAGAGCCTTGTCATGATC +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEDSSQE*QSLVMI
Trigger: GATCATGACAAGGCTCTGCAACTCCTGCGAAGAATC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTTCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: FLALVVTTLNGPAAGSEASDSSQ*SIEVGG
Trigger: ACCACCCACTTCTATGGACAACTGACTGCTGTCCGA...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGSDSSQ*SIEVGG
Trigger: ACCACCCACTTCTATGGACAACTGACTGCTGTCCGA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGGAGGGCTTTCATTCTaGGAGCTGTCTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHGGLSF*ELSRAS
Trigger: AGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTCC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGACAAAGAGCCAAGTCTaGGCTCTGGCCGGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLTKSQV*ALAGFD
Trigger: GTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTGT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCACAAAGAGCCAAGTCTaGGCTCTGGCCGGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSTKSQV*ALAGFD
Trigger: GTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTGT...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGATATCAAGCCCAGTCTTaGTGGAGACCTCAACGCCCA +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGYQAQS*WRPQRP
Trigger: TGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATA...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFVRFPA*RQAMPQ
Trigger: TTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCAC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQVRFPA*RQAMPQ
Trigger: TTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCAC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCTGGAGGACTCTCCTaGTTGAGAAGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESGGLS*LRRCRR
Trigger: TCTTCTGCACCTTCTCAACAAGGAGAGTCCTCCAGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACATCTTCAGGTGGTCCTaGGCCTTAAGTAGCCATGAG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHIFRWS*ALSSHE
Trigger: CTCATGGCTACTTAAGGCCAAGGACCACCTGAAGAT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGTGTGTTCATGTGCCTaGACACATCAGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHVCSCA*THQLQS
Trigger: TGACTGCAGCTGATGTGTCAAGGCACATGAACACAC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGTGTGTTCATGTGCCTaGACACATCAGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSVCSCA*THQLQS
Trigger: TGACTGCAGCTGATGTGTCAAGGCACATGAACACAC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGAGGCAAAGTGGTGATTaGAGAGGTCCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: STPPFKATIQTPFGCLQKRQSGD*RGPSTF
Trigger: GAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCT...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGCCTCCCAGCATGACCTaGCAGGCAACATCCATTTTC +
Preference number: 5 (lower is better)
Translates to: LLWEPQSISPPKDGGEVRPPSMT*QATSIF
Trigger: GAAAATGGATGTTGCCTGCAAGGTCATGCTGGGAGG...CCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHCHHCV*PGSGPP
Trigger: TGGAGGGCCTGATCCAGGCAATACACAATGATGACA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCGCCATCACTGCTGTaGCCCAGCTCTCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSPSLL*PSSQAT
Trigger: CGTGGCCTGAGAGCTGGGCAACAGCAGTGATGGCGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCAACACAACAGCTCCTCAAGGTCTGCCAGTCACACCACACTGGGGGAGACTGCGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: STQQLLKVCQSHHTGGDCGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...GCAGTCTCCCCCAGTGTGGTGTGACTGGCAGACCTTGAGGAGCTGTTGTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTCTCACCCACCAACTTaGCAGCAGGGACATTCACAA +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLSHPPT*QQGHSQ
Trigger: TTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGAAGTTGAGAAGAGATTaGCAGCACCTGCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: RWLLVTTLCLHWASETTLKLRRD*QHLLCC
Trigger: ACAGCAGAGCAGGTGCTGCAAATCTCTTCTCAACTT...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS TCA 90 bp GGGAGGGTCTCGGGATCTGCAGCCTGGTGGACAATTTCTTGGAGGTaGATCACAGAATCTGTAGAGAGGGAAAATGCTGATCGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: GRVSGSAAWWTISWR*ITESVERENADRFS
Trigger: GGAGAAACGATCAGCATTTTCCCTCTCTACAGATTCTGTGATTCACCTCCAAGAAATTGTCCACCAGGCTGCAGATCCCGAGACCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676512.1
CDS GCA 90 bp GTATTGCCAACCTTCTTTGTCACATGCCACAGCACAGCTCAGGACTaGATCCTTTATGCTGCTCAAATCGTCCACATCTCGCCCGTACAC +
Preference number: 5 (lower is better)
Translates to: VLPTFFVTCHSTAQD*ILYAAQIVHISPVH
Trigger: GTGTACGGGCGAGATGTGGACGATTTGAGCAGCATAAAGGATGCAGTCCTGAGCTGTGCTGTGGCATGTGACAAAGAAGGTTGGCAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS GCA 90 bp GCTGTAAAATCAGGTCAGGCTGGTTCTTATTCCTTAATGATTCTGTaGTCTCCTGGAGCACTGGGTGAGCTGCTGGCTCTGACATCTGCG +
Preference number: 5 (lower is better)
Translates to: AVKSGQAGSYSLMIL*SPGALGELLALTSA
Trigger: CGCAGATGTCAGAGCCAGCAGCTCACCCAGTGCTCCAGGAGAGCACAGAATCATTAAGGAATAAGAACCAGCCTGACCTGATTTTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 90 bp CTGCTTATTCTTCAGAGGGTAGTTGAGTGGGGGCACATTGACCAATaGCCAAATATTGAACCACATGTCTCTCACCCTGGGACCGTCTGG +
Preference number: 5 (lower is better)
Translates to: LLILQRVVEWGHIDQ*PNIEPHVSHPGTVW
Trigger: CCAGACGGTCCCAGGGTGAGAGACATGTGGTTCAATATTTGGGCATTGGTCAATGTGCCCCCACTCAACTACCCTCTGAAGAATAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553399.1
CDS CCA 90 bp CCAGGCACAGAGAGTCAGGAATACTGCACAGATACTGTTGACACCTaGCCAGGTAAGTTGAGAAGAGATTTGCAGCACCTGCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: PGTESQEYCTDTVDT*PGKLRRDLQHLLCC
Trigger: ACAGCAGAGCAGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTCTGTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS CCA 90 bp CCAGGCACAGAGAGTCAGGAATACTGCACAGATACTGTTGACACCTaGCCAGGTAAGTTGAGAAGAGATTTGCAGCACCAGGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: PGTESQEYCTDTVDT*PGKLRRDLQHQALA
Trigger: AGCAAGAGCCTGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTCTGTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677026.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGCACATCTCAGCAGATTaGGACACACCACCAATGCCT +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLHISAD*DTPPMP
Trigger: AGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTG...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGTCACATCTCAGCAGATTaGGACACACCACCAATGCCT +
Preference number: 5 (lower is better)
Translates to: SLGLPGNPVLTSFQDVLCHISAD*DTPPMP
Trigger: AGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTG...ACATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACACATCTCAGCAGATTaGGACACACCACCAATGCCT +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGHISAD*DTPPMP
Trigger: AGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTDPGYS*RVDVLP
Trigger: GGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWDPGYS*RVDVLP
Trigger: GGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTC...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCCAGCTCTCCCTCCTaGGATTTCCGTCAGGCACGT +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESSSPS*DFRQAR
Trigger: ACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCAAGCCTCGGCTGGGTaGGGATTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQQASAG*GLENRA
Trigger: AGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCAAGCCTCGGCTGGGTaGGGATTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCQASAG*GLENRA
Trigger: AGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACAACAGATCTCTCTTaGGTATGGGGTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTTDLS*VWGCCS
Trigger: AGAGCAGCAACCCCATACCAAAGAGAGATCTGTTGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTAACTGCATCAGGCTCTaGCTGGGGGTCCTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCNCIRL*LGVLGW
Trigger: CCAGCCAAGGACCCCCAGCAAGAGCCTGATGCAGTT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAAGTTGAGAAGAGATTaGCAGCACCTGGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLKLRRD*QHLGRR
Trigger: TCTCCTCCCCAGGTGCTGCAAATCTCTTCTCAACTT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITWPGK*RRDLQH
Trigger: GTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTACTGCACAGATACTGTaGACACCTGGCCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: FLALVVTTLNGPAAGSEATAQIL*TPGQVS
Trigger: ACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGT...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGACTGCACAGATACTGTaGACACCTGGCCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: ILHGTEALVECQVLTLAQTAQIL*TPGQVS
Trigger: ACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGT...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: FLALVVTTLNGPAAGSEALPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGLPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: WHHGYFLALVVTTLNGPAAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...TGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACATGGCACTCAGACTTCCCTCTGACGTACTTGTGCTCAGCTCACTACTTGTACCTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TWHSDFPLTYLCSAHYLYLNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...GTACAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAAGTCTGAGTGCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp GAGGGCATAGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTTCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: EGIDGILHGTEALVECQVSSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...AACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCTATGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGA +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLPGSF*SDDPGG
Trigger: TCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTGGCTCAGTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 5 (lower is better)
Translates to: ILHGTEALVECQVLTLAQFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...CTGAGCCAGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp TCTGAACGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: SERWLLVTTLCLHWASETNLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...TGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CGATGGTTGCTTGTCACCACCTTGTGTCTCCACTGGGCCTCAGAGACAACCTTGTTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: RWLLVTTLCLHWASETTLFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...CAAGGTTGTCTCTGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAACCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AGTCAGGAATACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTTGAGAAGACAATGGCCTGTAGAGTaGAGCGGCCACTGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SQEYCTDTVDTWPGKLRRQWPVE*SGHCQF
Trigger: GAACTGGCAGTGGCCGCTCAACTCTACAGGCCATTG...TCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTTGGGAAGAGCTCTGTaGCAGCAGAACAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLGRAL*QQNKGI
Trigger: AATCCCTTTGTTCTGCTGCAACAGAGCTCTTCCCAA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTGGAGTGATGAGTCCCTaGGGGAGGAGTAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSGVMSP*GRSRAF
Trigger: GAAAGCCCTACTCCTCCCCAAGGGACTCATCACTCC...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGGAGTGATGAGTCCCTaGGGGAGGAGTAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRGVMSP*GRSRAF
Trigger: GAAAGCCCTACTCCTCCCCAAGGGACTCATCACTCC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCCATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIHDKLG*LTFNLG
Trigger: CCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATG...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTATTGCCAACCTTCTTaGTCACATGCCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEYCQPS*SHATAQ
Trigger: CTGTGCTGTGGCATGTGACAAAGAAGGTTGGCAATA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACCACGGGAAACAGGTATaGCCAACCTTCTTTGTCACA +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHHGKQV*PTFFVT
Trigger: TGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGTG...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCACGGGAAACAGGTATaGCCAACCTTCTTTGTCACA +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSHGKQV*PTFFVT
Trigger: TGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGTG...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSDSSQ*SIEVGG
Trigger: ACCACCCACTTCTATGGACAACTGACTGCTGTCCGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLSDSSQ*SIEVGG
Trigger: ACCACCCACTTCTATGGACAACTGACTGCTGTCCGA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAGGAGGGCTTTCATTCTaGGAGCTGTCTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGGGLSF*ELSRAS
Trigger: AGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTCC...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCCACCTCATCTGCTTaGGGGACTCTCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSTSSA*GTLTTN
Trigger: GTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTCCACCTCATCTGCTTaGGGGACTCTCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLSTSSA*GTLTTN
Trigger: GTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGGA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCTATCAAGCCCAGTCTTaGTGGAGACCTCAACGCCCA +
Preference number: 5 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFYQAQS*WRPQRP
Trigger: TGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATA...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFVRFPA*RQAMPQ
Trigger: TTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCAC...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCCATCCTGCACCAGCCTaGAGCCATGATTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: EADSKQYAQGHTRLTLSIHPAPA*SHDSAD
Trigger: ATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGATG...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACATCCTGCACCAGCCTaGAGCCATGATTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTHPAPA*SHDSAD
Trigger: ATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGATG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGATCTGGAGGACTCTCCTaGTTGAGAAGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRSGGLS*LRRCRR
Trigger: TCTTCTGCACCTTCTCAACAAGGAGAGTCCTCCAGA...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCTCTGGAGGACTCTCCTaGTTGAGAAGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLISGGLS*LRRCRR
Trigger: TCTTCTGCACCTTCTCAACAAGGAGAGTCCTCCAGA...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCATGGCGGCCCGAACTaGGTCCTTCATAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDHGGPN*VLHKLL
Trigger: CAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCATG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAATCTTCAGGTGGTCCTaGGCCTTAAGTAGCCATGAG +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGIFRWS*ALSSHE
Trigger: CTCATGGCTACTTAAGGCCAAGGACCACCTGAAGAT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGCTGCGGGATGTTTCTaGGAGGTAGATCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLAAGCF*EVDLQV
Trigger: CACCTGAAGATCTACCTCCAAGAAACATCCCGCAGC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCGTGTGTTCATGTGCCTaGACACATCAGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: WEPQSISPPKDGGEVRDFVCSCA*THQLQS
Trigger: TGACTGCAGCTGATGTGTCAAGGCACATGAACACAC...GAAATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGAAGGCAAAGTGGTGATTaGAGAGGTCCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGRQSGD*RGPSTF
Trigger: GAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCT...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCAGGCAAAGTGGTGATTaGAGAGGTCCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIRQSGD*RGPSTF
Trigger: GAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAGGCAAAGTGGTGATTaGAGAGGTCCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLRQSGD*RGPSTF
Trigger: GAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGACTCACTGACACATTaGAGCAGTTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHDSLTH*SSCWIS
Trigger: TGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGTGTCCCCGTCACTTTaGGCTGCCATGCCTGACTCA +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEVSPSL*AAMPDS
Trigger: TGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACAC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTGGGGCGGAATTCTCTaGAACGCTTCCAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDWGGIL*NASRQL
Trigger: CAACTGCCTGGAAGCGTTCAAGAGAATTCCGCCCCA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCACCCCGGGGGTGGCTaGTCAGAAGCCACTGGGCAC +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLHPGGG*SEATGH
Trigger: GTGCCCAGTGGCTTCTGACAAGCCACCCCCGGGGTG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCGACCCCGCCTTTCAAGGCTACTATTCAAACGCCGTTCGGCTGTCTCCAAAAGAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 5 (lower is better)
Translates to: STPPFKATIQTPFGCLQKRETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...CTTTTGGAGACAGCCGAACGGCGTTTGAATAGTAGCCTTGAAAGGCGGGGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGCTTCCAGTTTCTGTTaGTCTCAGCATCATGGATGG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHASSFC*SQHHGW
Trigger: CCATCCATGATGCTGAGACAAACAGAAACTGGAAGC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGCTTCCAGTTTCTGTTaGTCTCAGCATCATGGATGG +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSASSFC*SQHHGW
Trigger: CCATCCATGATGCTGAGACAAACAGAAACTGGAAGC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGCACGGGAAACAGGTATaGCCAACCTTCTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQHGKQV*PTFFVC
Trigger: GCAGACAAAGAAGGTTGGCAATACCTGTTTCCCGTG...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCCTAGGGCTCTCTGAGAGACTGAGACACAATTCATaGGCATCACCAGCGTTTGGA +
Preference number: 5 (lower is better)
Translates to: SPPKDGGEVRDFLGLSERLRHNS*ASPAFG
Trigger: TCCAAACGCTGGTGATGCCAATGAATTGTGTCTCAG...TCTCTCAGAGAGCCCTAGGAAATCCCTCACCTCACCTCCATCTTTGGGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp TTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGCATTGTTGGACATTGTaGGTCAAAGTGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LLWEPQSISPPKDGGEVRHCWTL*VKVWGG
Trigger: CCCACCCCACACTTTGACCAACAATGTCCAACAATG...CCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS TCA 90 bp AGTATTAGACAAGCAGCATTACACCACTTGCCTAGTGCATGGGAATaGGCTCTTCAGATTACCTGCCTGGCTCCTTCTTGTCCGACGACC +
Preference number: 5 (lower is better)
Translates to: SIRQAALHHLPSAWE*ALQITCLAPSCPTT
Trigger: GGTCGTCGGACAAGAAGGAGCCAGGCAGGTAATCTGAAGAGCTCATTCCCATGCACTAGGCAAGTGGTGTAATGCTGCTTGTCTAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557366.5
ENST00000557407.1
CDS GCA 90 bp GTTGATGTCCTGCCCACATCTCAGCAGATTTGGACACACCACCAATaGCTGAAGTATGTCTTCTACCCTCTTTGGGATATCCCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: VDVLPTSQQIWTHHQ*LKYVFYPLWDIPLS
Trigger: GGACAAGGGGATATCCCAAAGAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTGGGCAGGACATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTGTCTTCTACCCTCTTaGGGATATCCCCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLCLLPS*GYPLVP
Trigger: AGGGACAAGGGGATATCCCAAAGAGGGTAGAAGACA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACACATCTCAGCAGATTaGGACACACCACCAATGCCT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTHISAD*DTPPMP
Trigger: AGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGAAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGRTGLA*PAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCT...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTCAAGCCTCGGCTGGGTaGGGATTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFQASAG*GLENRA
Trigger: AGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTG...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAAGCCTCGGCTGGGTaGGGATTGGAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVQASAG*GLENRA
Trigger: AGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTG...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LESSESTSSIVKPISCPTVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACTTTCTGTAAGAGCTaGAGAACATCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTFCKS*RTSSSL
Trigger: CAGGGAGGAAGATGTTCTCAAGCTCTTACAGAAAGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCTCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGSERLS*QSWHWE
Trigger: CTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGA...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSERLS*QSWHWE
Trigger: CTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTAAGTTGAGAAGAGATTaGCAGCACCTGGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: RWHTSWHRSPGRVSGSDTKLRRD*QHLGRR
Trigger: TCTCCTCCCCAGGTGCTGCAAATCTCTTCTCAACTT...AGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp TACTTGGGCCAGTTCTTGGATCACTTCCTGGTAGCGCTCCATGAACATCAGTTCACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: YLGQFLDHFLVALHEHQFTWPGK*RRDLQH
Trigger: GTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGT...GAACTGATGTTCATGGAGCGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACTGCACAGATACTGTaGACACCTGGCCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTAQIL*TPGQVS
Trigger: ACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACTGCCTTCACATGGCTaGGCATTGTATAAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLPSHG*ALYKQG
Trigger: CCCTTGCTTATACAATGCCAAGCCATGTGAAGGCAG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSTDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AGATGGCATACTTCATGGCACAGAAGCCCTGGTAGAGTGTCAGGTTCTGACACTACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RWHTSWHRSPGRVSGSDTTDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...AGTGTCAGAACCTGACACTCTACCAGGGCTTCTGTGCCATGAAGTATGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCCTCAGAGACAACCTaGGAAAGTCGATGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQASETT*ESRCRR
Trigger: CCGCCTGCATCGACTTTCCAAGGTTGTCTCTGAGGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLSSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 5 (lower is better)
Translates to: LAPWLLPGPCSNNSEWTSFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...GCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLNLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGAGGTGTTGAGCAGCTaGTCAGTCACGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLEVLSS*SVTSEI
Trigger: TATCTCTGACGTGACTGACAAGCTGCTCAACACCTC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACAGTTCATACTCCTGTGCTTCTAGAATCATGTTCATGACAGTTGATGGGTCCGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: HSSYSCASRIMFMTVDGSGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...GGACCCATCAACTGTCATGAACATGATTCTAGAAGCACAGGAGTATGAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp GGGAGGCGCGTGGAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCGAGACTCTTACTGATTaGCTGAAGAACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: GRRVEADSKQYAQGHTRLETLTD*LKNNWK
Trigger: TTTCCAGTTGTTCTTCAGCAAATCAGTAAGAGTCTC...GAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTCCACGCGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTCTCAGAGCTCAAACTTaGAAGGAGAACTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: FLALVVTTLNGPAAGSEALRAQT*KENCSK
Trigger: CTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGAG...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCCTCAGAGCTCAAACTTaGAAGGAGAACTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLILRAQT*KENCSK
Trigger: CTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGAG...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCTGGCCCTTGTAGTAACAACTCTGAATGGACCAGCAGCTGGGTCAGAAGCTTTGGGAAGAGCTCTGTaGCAGCAGAACAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: FLALVVTTLNGPAAGSEALGRAL*QQNKGI
Trigger: AATCCCTTTGTTCTGCTGCAACAGAGCTCTTCCCAA...AGCTTCTGACCCAGCTGCTGGTCCATTCAGAGTTGTTACTACAAGGGCCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDHDKLG*LTFNLG
Trigger: CCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTATTGCCAACCTTCTTaGTCACATGCCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLYCQPS*SHATAQ
Trigger: CTGTGCTGTGGCATGTGACAAAGAAGGTTGGCAATA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGAGGGTCAGCAGAATCTaGGATCCCACATACAGCGCC +
Preference number: 5 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWRVSRI*DPTYSA
Trigger: GGCGCTGTATGTGGGATCCAAGATTCTGCTGACCCT...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTCCTGTGAGGGCTGGGTaGGTGGGAAACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFPVRAG*VGNSFP
Trigger: GGGAAAGGAGTTTCCCACCAACCCAGCCCTCACAGG...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGGAGGGCTTTCATTCTaGGAGCTGTCTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLGGLSF*ELSRAS
Trigger: AGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTCC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTTGGCAGAAGGAATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATATCAAGCCCAGTCTTaGTGGAGACCTCAACGCCCA +
Preference number: 5 (lower is better)
Translates to: VLAEGMKHAFAGEGSDLGYQAQS*WRPQRP
Trigger: TGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATA...TCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCATTCCTTCTGCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCATGGCGGCCCGAACTaGGTCCTTCATAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTHGGPN*VLHKLL
Trigger: CAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCATG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATGCTGCGGGATGTTTCTaGGAGGTAGATCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: FYSDWHSSQRQREAKVHHAAGCF*EVDLQV
Trigger: CACCTGAAGATCTACCTCCAAGAAACATCCCGCAGC...ATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAGTGTGTTCATGTGCCTaGACACATCAGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTVCSCA*THQLQS
Trigger: TGACTGCAGCTGATGTGTCAAGGCACATGAACACAC...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGAGGCAAAGTGGTGATTaGAGAGGTCCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLRQSGD*RGPSTF
Trigger: GAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCT...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCGACACATTTGAGCAGTaGCTGGATCTCACTGTACTT +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSDTFEQ*LDLTVL
Trigger: AAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTC...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGGACACATTTGAGCAGTaGCTGGATCTCACTGTACTT +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEDTFEQ*LDLTVL
Trigger: AAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTC...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTACTCTGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGACTCACTGACACATTaGAGCAGTTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: LLWEPQSISPPKDGGEVRDSLTH*SSCWIS
Trigger: TGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTC...CCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCAGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp ATAATACAGAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGAGTGTCCCCGTCACTTTaGGCTGCCATGCCTGACTCA +
Preference number: 5 (lower is better)
Translates to: IIQKLRYGLYGTIVGSKGVSPSL*AAMPDS
Trigger: TGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACAC...TCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTCTGTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAACGCTTCCAGGCAGTaGAGGAGGATGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVNASRQ*RRMVSP
Trigger: CGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLCHHCV*PGSGPP
Trigger: TGGAGGGCCTGATCCAGGCAATACACAATGATGACA...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTACCTTGTTGTCATCATaGTGTATTGCCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLTLLSS*CIAWIR
Trigger: CCTGATCCAGGCAATACACAATGATGACAACAAGGT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGGAAAGCAGTGAGTCCACCTCGTCCATAGTGAAGCCAATCTCCTGTCCAACCACCTTGTTGTCATCATaGTGTATTGCCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LESSESTSSIVKPISCPTTLLSS*CIAWIR
Trigger: CCTGATCCAGGCAATACACAATGATGACAACAAGGT...GGTTGGACAGGAGATTGGCTTCACTATGGACGAGGTGGACTCACTGCTTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCACCTTGTTGTCATCATaGTGTATTGCCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: SLILTLSRGPIPKPTLDSTLLSS*CIAWIR
Trigger: CCTGATCCAGGCAATACACAATGATGACAACAAGGT...GGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCTGGGCACAGATGTCTaGCACTACTGCATCCCCGCT +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCLGTDV*HYCIPA
Trigger: AGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACAAACATTGTCACATCTaGCGTGGGAAGACAAGACAG +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHKHCHI*RGKTRQ
Trigger: CTGTCTTGTCTTCCCACGCAAGATGTGACAATGTTT...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTAAACATTGTCACATCTaGCGTGGGAAGACAAGACAG +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLKHCHI*RGKTRQ
Trigger: CTGTCTTGTCTTCCCACGCAAGATGTGACAATGTTT...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGCTTCCAGTTTCTGTTaGTCTCAGCATCATGGATGG +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLASSFC*SQHHGW
Trigger: CCATCCATGATGCTGAGACAAACAGAAACTGGAAGC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGGCAGGCACTGCCTTTTaGAGCTGTGTCCATGTCCCA +
Preference number: 5 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWAGTAF*SCVHVP
Trigger: TGGGACATGGACACAGCTCAAAAAGGCAGTGCCTGC...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGAAAGCTGAGATACGGGTaGTATGGAACTATTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRKLRYG*YGTIVG
Trigger: CCCCACAATAGTTCCATACAACCCGTATCTCAGCTT...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp CCAAGCCTCAGCTCCACCTCTGATAATACAGAAGCTGAGATACGGGTTGTATGGCTTGGGGATAAAGACTaGGGAAGGCAAAGACGCATG +
Preference number: 5 (lower is better)
Translates to: PSLSSTSDNTEAEIRVVWLGDKD*GRQRRM
Trigger: CATGCGTCTTTGCCTTCCCAAGTCTTTATCCCCAAG...CCATACAACCCGTATCTCAGCTTCTGTATTATCAGAGGTGGAGCTGAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS TCA 90 bp TGGAACTATTGTGGGGAGCAAGGGATAAAGGTGACTAGGCAAGCCTaGGACACAATTCATTGGCATCACCAGCGTTTGGAGACAATTCCG +
Preference number: 5 (lower is better)
Translates to: WNYCGEQGIKVTRQA*DTIHWHHQRLETIP
Trigger: CGGAATTGTCTCCAAACGCTGGTGATGCCAATGAATTGTGTCTCAGGCTTGCCTAGTCACCTTTATCCCTTGCTCCCCACAATAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS GCA 90 bp GCTAGGGGAACGTCCTCTCTCTTCGGTGTGAACTCTGTCCCTCAATaGTGCCAAGATTGGCACTATCTTGTTGTCATCATTGTGTATTGC +
Preference number: 5 (lower is better)
Translates to: ARGTSSLFGVNSVPQ*CQDWHYLVVIIVYC
Trigger: GCAATACACAATGATGACAACAAGATAGTGCCAATCTTGGCAGCATTGAGGGACAGAGTTCACACCGAAGAGAGAGGACGTTCCCCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTGTCTTCTACCCTCTTaGGGATATCCCCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDCLLPS*GYPLVP
Trigger: AGGGACAAGGGGATATCCCAAAGAGGGTAGAAGACA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVDPGYS*RVDVLP
Trigger: GGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACTTTCTTGCTTTGGCTTCTCAGGAGGGCTGCGGCTACTGATCTCATCCAGTTGGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: TFLLWLLRRAAATDLIQLVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...CAACTGGATGAGATCAGTAGCCGCAGCCCTCCTGAGAAGCCAAAGCAAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp GAAGCAGACTCTAAGCAATATGCCCAAGGCCACACAAGACTCACACTGAGCATCACAACAGATCTCTCTTaGGTATGGGGTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: EADSKQYAQGHTRLTLSITTDLS*VWGCCS
Trigger: AGAGCAGCAACCCCATACCAAAGAGAGATCTGTTGT...GATGCTCAGTGTGAGTCTTGTGTGGCCTTGGGCATATTGCTTAGAGTCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACAACAGATCTCTCTTaGGTATGGGGTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTTDLS*VWGCCS
Trigger: AGAGCAGCAACCCCATACCAAAGAGAGATCTGTTGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTACTTGTGCTCAGCTCACTACTTGTACTTTCCAGGGATGGGTTTGAACCTCTGTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: VLVLSSLLVLSRDGFEPLCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...CAGAGGTTCAAACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCACAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554557.5
ENST00000678382.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEYLGQF*DHFLVA
Trigger: CGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACTCAGAGCTCAAACTTaGAAGGAGAACTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTLRAQT*KENCSK
Trigger: CTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGAG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEHDKLG*LTFNLG
Trigger: CCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCTCAAACAGAGGGAATaGTTCCAGAAGGCGCTCACA +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDLKQRE*FQKALT
Trigger: TGTGAGCGCCTTCTGGAACAATTCCCTCTGTTTGAG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFVLVEG*LCHFKA
Trigger: TGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCAC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTCTGGTACATCTTTGTTGCAGTAACTATAGCACTGATCACACACACGAGCAGTCCACCTCATCTGCTTaGGGGACTCTCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: PLVHLCCSNYSTDHTHEQSTSSA*GTLTTN
Trigger: GTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGGA...CTGCTCGTGTGTGTGATCAGTGCTATAGTTACTGCAACAAAGATGTACCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCTCCACCTCATCTGCTTaGGGGACTCTCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFSTSSA*GTLTTN
Trigger: GTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGGA...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CAGGTTGAACGTGAACAGCACCTGATGGGCTTCTGCGAAGTTCCCGCGAAGGATTCATTTTCCTCCTCTTaGAGATCCAAAATCCATTCC +
Preference number: 5 (lower is better)
Translates to: QVEREQHLMGFCEVPAKDSFSSS*RSKIHS
Trigger: GGAATGGATTTTGGATCTCAAAGAGGAGGAAAATGA...ATCCTTCGCGGGAACTTCGCAGAAGCCCATCAGGTGCTGTTCACGTTCAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGTGAGGTTCCCGGCTTaGAGGCAGGCCATGCCCCAA +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIVRFPA*RQAMPQ
Trigger: TTGGGGCATGGCCTGCCTCAAAGCCGGGAACCTCAC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCATCCTGCACCAGCCTaGAGCCATGATTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTHPAPA*SHDSAD
Trigger: ATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGATG...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCATGGCGGCCCGAACTaGGTCCTTCATAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFHGGPN*VLHKLL
Trigger: CAGCAGTTTATGAAGGACCAAGTTCGGGCCGCCATG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAGCTGAGATACGGGTTGTATGGAACTATTGTGGGGAGCAAGGGATAAAGGTGATCTTCAGGTGGTCCTaGGCCTTAAGTAGCCATGAG +
Preference number: 5 (lower is better)
Translates to: EAEIRVVWNYCGEQGIKVIFRWS*ALSSHE
Trigger: CTCATGGCTACTTAAGGCCAAGGACCACCTGAAGAT...CACCTTTATCCCTTGCTCCCCACAATAGTTCCATACAACCCGTATCTCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGCTGCGGGATGTTTCTaGGAGGTAGATCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEAAGCF*EVDLQV
Trigger: CACCTGAAGATCTACCTCCAAGAAACATCCCGCAGC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTAGGCAAAGTGGTGATTaGAGAGGTCCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: FILTGTPPKGNGKQRFTIRQSGD*RGPSTF
Trigger: GAAAGTGCTGGGACCTCTCAAATCACCACTTTGCCT...AATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACCTCCCAGCATGACCTaGCAGGCAACATCCATTTTC +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEPPSMT*QATSIF
Trigger: GAAAATGGATGTTGCCTGCAAGGTCATGCTGGGAGG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TATAAGCAAGGGTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGACACATTTGAGCAGTaGCTGGATCTCACTGTACTT +
Preference number: 5 (lower is better)
Translates to: YKQGSLGLPGNPVLTSFQDTFEQ*LDLTVL
Trigger: AAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTC...CTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGAGACACATTTGAGCAGTaGCTGGATCTCACTGTACTT +
Preference number: 5 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRDTFEQ*LDLTVL
Trigger: AAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTC...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGTGTCCCCGTCACTTTaGGCTGCCATGCCTGACTCA +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVVSPSL*AAMPDS
Trigger: TGAGTCAGGCATGGCAGCCAAAAGTGACGGGGACAC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTGGGGCGGAATTCTCTaGAACGCTTCCAGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCWGGIL*NASRQL
Trigger: CAACTGCCTGGAAGCGTTCAAGAGAATTCCGCCCCA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FILTGTPPKGNGKQRFTICHHCV*PGSGPP
Trigger: TGGAGGGCCTGATCCAGGCAATACACAATGATGACA...AATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDCHHCV*PGSGPP
Trigger: TGGAGGGCCTGATCCAGGCAATACACAATGATGACA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGCCTTTCTTTCCCTCTaGCCCGTGTTAGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCAFLSL*PVLASQ
Trigger: CTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGCCCCACATTTGCAAATaGAAGTCACTGAGTATGACA +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLEPHICK*KSLSMT
Trigger: TGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACATTCCGCTCACCTTGTaGTCATCATTGTGTATTGCC +
Preference number: 5 (lower is better)
Translates to: TGTPPKGNGKQRFTIFPNIPLTL*SSLCIA
Trigger: GGCAATACACAATGATGACAACAAGGTGAGCGGAAT...GTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS GCA 90 bp AGGAAAAGAGATCCCTTACCTCAGCAGATTTGGACACACCACCAATaGCTGAAGTATGTCTTCTACCCTCTTTGGGATATCCCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RKRDPLPQQIWTHHQ*LKYVFYPLWDIPLS
Trigger: GGACAAGGGGATATCCCAAAGAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCAAATCTGCTGAGGTAAGGGATCTCTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553399.1
CDS-3UTR CAA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTTGTCTTCTACCCTCTTaGGGATATCCCCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSCLLPS*GYPLVP
Trigger: AGGGACAAGGGGATATCCCAAAGAGGGTAGAAGACA...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTCACACTGAGCATCTCATTCCAGAGACATGCTCTTAACCACTATCCGATTCTGCACATCTCAGCAGATTaGGACACACCACCAATGCCT +
Preference number: 5 (lower is better)
Translates to: LTLSISFQRHALNHYPILHISAD*DTPPMP
Trigger: AGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTG...CAGAATCGGATAGTGGTTAAGAGCATGTCTCTGGAATGAGATGCTCAGTGTGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TTCTCTCCCCAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: FSPQTLKEEVPFSHPPTLVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...CAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTGGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACACAACAGATCTCTCTTaGGTATGGGGTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDTTDLS*VWGCCS
Trigger: AGAGCAGCAACCCCATACCAAAGAGAGATCTGTTGT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAAGTTGAGAAGAGATTaGCAGCACCTGGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSKLRRD*QHLGRR
Trigger: TCTCCTCCCCAGGTGCTGCAAATCTCTTCTCAACTT...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAAGTTGAGAAGAGATTaGCAGCACCTGGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEKLRRD*QHLGRR
Trigger: TCTCCTCCCCAGGTGCTGCAAATCTCTTCTCAACTT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTTWPGK*RRDLQH
Trigger: GTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCTCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFSSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCCTCTGAACGATGGTaGCTTGTCACCACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESSERW*LVTTLC
Trigger: ACACAAGGTGGTGACAAGCAACCATCGTTCAGAGGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGECSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCTACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: SSSIWGSTIGLAPWLLPGYLGQF*DHFLVA
Trigger: CGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA...GCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCYLGQF*DHFLVA
Trigger: CGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDNLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTCTTTGGGACTCCCAGGGAACCCCGTTCTGACTTCCTTTCAGGATGTGCTATGGAGACTCTTACTGATTaGCTGAAGAACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: VFGTPREPRSDFLSGCAMETLTD*LKNNWK
Trigger: TTTCCAGTTGTTCTTCAGCAAATCAGTAAGAGTCTC...CATAGCACATCCTGAAAGGAAGTCAGAACGGGGTTCCCTGGGAGTCCCAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACGAGACTCTTACTGATTaGCTGAAGAACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHETLTD*LKNNWK
Trigger: TTTCCAGTTGTTCTTCAGCAAATCAGTAAGAGTCTC...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCGATTCTTCGCAGGAGTaGCAGAGCCTTGTCATGATC +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTDSSQE*QSLVMI
Trigger: GATCATGACAAGGCTCTGCAACTCCTGCGAAGAATC...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGGATTCTTCGCAGGAGTaGCAGAGCCTTGTCATGATC +
Preference number: 5 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWDSSQE*QSLVMI
Trigger: GATCATGACAAGGCTCTGCAACTCCTGCGAAGAATC...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGATTCTTCGCAGGAGTaGCAGAGCCTTGTCATGATC +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRDSSQE*QSLVMI
Trigger: GATCATGACAAGGCTCTGCAACTCCTGCGAAGAATC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCCTGTGAGGGCTGGGTaGGTGGGAAACTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLPVRAG*VGNSFP
Trigger: GGGAAAGGAGTTTCCCACCAACCCAGCCCTCACAGG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCGGAGGGCTTTCATTCTaGGAGCTGTCTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFGGLSF*ELSRAS
Trigger: AGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTCC...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCCACCTCATCTGCTTaGGGGACTCTCACCACAAAC +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSTSSA*GTLTTN
Trigger: GTTTGTGGTGAGAGTCCCCAAAGCAGATGAGGTGGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCATCCTGCACCAGCCTaGAGCCATGATTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCHPAPA*SHDSAD
Trigger: ATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGATG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCACTGGAGTCCCACTTTTATAGCTaGGTTGGAAAATGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: NPTLSNLGQSQRSPTPLESHFYS*VGKCLL
Trigger: TAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGGA...CTCCAGTGGAGTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AGTAGGGTCCAATCCAACTCTTTCCAACCTAGGGCAGAGCCAGAGAAGTCCCACTCCCACTTTTATAGCTaGGTTGGAAAATGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: SRVQSNSFQPRAEPEKSHSHFYS*VGKCLL
Trigger: TAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGGA...GTGGGACTTCTCTGGCTCTGCCCTAGGTTGGAAAGAGTTGGATTGGACCCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347230.9
ENST00000554557.5
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGCTGCGGGATGTTTCTaGGAGGTAGATCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFAAGCF*EVDLQV
Trigger: CACCTGAAGATCTACCTCCAAGAAACATCCCGCAGC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGTGTGTTCATGTGCCTaGACACATCAGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEVCSCA*THQLQS
Trigger: TGACTGCAGCTGATGTGTCAAGGCACATGAACACAC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCCTCCCAGCATGACCTaGCAGGCAACATCCATTTTC +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQPPSMT*QATSIF
Trigger: GAAAATGGATGTTGCCTGCAAGGTCATGCTGGGAGG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAACGCTTCCAGGCAGTaGAGGAGGATGGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLNASRQ*RRMVSP
Trigger: CGGGGACACCATCCTCCTCAACTGCCTGGAAGCGTT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGECHHCV*PGSGPP
Trigger: TGGAGGGCCTGATCCAGGCAATACACAATGATGACA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACAACCTTGTTGTCATCATaGTGTATTGCCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTTLLSS*CIAWIR
Trigger: CCTGATCCAGGCAATACACAATGATGACAACAAGGT...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTCAGGACTTCTTGTGCTaGGGAGAAGAGACACCTGGA +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCQDFLC*GEETPG
Trigger: TCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTG...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATCTCACCCACCAACTTaGCAGCAGGGACATTCACAA +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGESHPPT*QQGHSQ
Trigger: TTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCACCTTTTCTCAAACATaGTCACATCTTGCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLITFSQT*SHLAWE
Trigger: TTCCCACGCAAGATGTGACAATGTTTGAGAAAAGGT...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CAGACTCTCAAAGAGGAAGTCCCATTCTCTCACCCACCAACTTTGCAGCAGGGACCCCACATTTGCAAATaGAAGTCACTGAGTATGACA +
Preference number: 5 (lower is better)
Translates to: QTLKEEVPFSHPPTLQQGPHICK*KSLSMT
Trigger: TGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG...TCCCTGCTGCAAAGTTGGTGGGTGAGAGAATGGGACTTCCTCTTTGAGAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGGTGGTGTTTTTCTGTaGGAGACTACAGCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRGGVFL*ETTAWC
Trigger: ACACCACGCTGTAGTCTCCAACAGAAAAACACCACC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTGTCTTCTACCCTCTTaGGGATATCCCCTTGTCCCT +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQCLLPS*GYPLVP
Trigger: AGGGACAAGGGGATATCCCAAAGAGGGTAGAAGACA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCACATCTCAGCAGATTaGGACACACCACCAATGCCT +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFHISAD*DTPPMP
Trigger: AGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIDPGYS*RVDVLP
Trigger: GGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGACAACAGATCTCTCTTaGGTATGGGGTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRTTDLS*VWGCCS
Trigger: AGAGCAGCAACCCCATACCAAAGAGAGATCTGTTGT...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTCAGAGAGGCTGTCTTaGCAGTCCTGGCACTGGGAG +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLSERLS*QSWHWE
Trigger: CTCCCAGTGCCAGGACTGCAAAGACAGCCTCTCTGA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAAGTTGAGAAGAGATTaGCAGCACCTGGGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQKLRRD*QHLGRR
Trigger: TCTCCTCCCCAGGTGCTGCAAATCTCTTCTCAACTT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTACTGATCTCATCCAGTaGCTCTTGGAGAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFTDLIQ*LLEKPE
Trigger: CTCAGGCTTCTCCAAGAGCAACTGGATGAGATCAGT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTTCCCTCTGACGTACTaGTGCTCAGCTCACTACTTG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFFPLTY*CSAHYL
Trigger: CAAGTAGTGAGCTGAGCACAAGTACGTCAGAGGGAA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGENLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGAGGTGTTGAGCAGCTaGTCAGTCACGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQEVLSS*SVTSEI
Trigger: TATCTCTGACGTGACTGACAAGCTGCTCAACACCTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGGGTCTCCAGAGGTGTaGAGCAGCTTGTCAGTCACG +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNGSPEV*SSLSVT
Trigger: CGTGACTGACAAGCTGCTCAACACCTCTGGAGACCC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGGAGACTCTTACTGATTaGCTGAAGAACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLETLTD*LKNNWK
Trigger: TTTCCAGTTGTTCTTCAGCAAATCAGTAAGAGTCTC...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGATCGAGACTCTTACTGATTaGCTGAAGAACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: WMVSLSFPLARVSLTDLIETLTD*LKNNWK
Trigger: TTTCCAGTTGTTCTTCAGCAAATCAGTAAGAGTCTC...GATCAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAACTCAGAGCTCAAACTTaGAAGGAGAACTGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGELRAQT*KENCSK
Trigger: CTTGCTGCAGTTCTCCTTCAAAGTTTGAGCTCTGAG...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTTGGGAAGAGCTCTGTaGCAGCAGAACAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRLGRAL*QQNKGI
Trigger: AATCCCTTTGTTCTGCTGCAACAGAGCTCTTCCCAA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTCTCTCTGGGGGAACTaGTCTCTCAAACAGGAGATG +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSLWGN*SLKQEM
Trigger: CATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAGA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTCTCTCTGGGGGAACTaGTCTCTCAAACAGGAGATG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFSLWGN*SLKQEM
Trigger: CATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAGA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCTCAAACAGAGGGAATaGTTCCAGAAGGCGCTCACA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQLKQRE*FQKALT
Trigger: TGTGAGCGCCTTCTGGAACAATTCCCTCTGTTTGAG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATGAAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTATTGCCAACCTTCTTaGTCACATGCCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: MKHAFAGEGSDLGSRLRLYCQPS*SHATAQ
Trigger: CTGTGCTGTGGCATGTGACAAAGAAGGTTGGCAATA...AAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATATTGCCAACCTTCTTaGTCACATGCCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEYCQPS*SHATAQ
Trigger: CTGTGCTGTGGCATGTGACAAAGAAGGTTGGCAATA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGATTCTTCGCAGGAGTaGCAGAGCCTTGTCATGATC +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQDSSQE*QSLVMI
Trigger: GATCATGACAAGGCTCTGCAACTCCTGCGAAGAATC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSVLVEG*LCHFKA
Trigger: TGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCAC...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTCATTTTCCTCCTCTTaGAGATCCAAAATCCATTCC +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSFSSS*RSKIHS
Trigger: GGAATGGATTTTGGATCTCAAAGAGGAGGAAAATGA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTGGCTCTGGCCGGCTTaGACGAACATCATCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIWLWPA*TNIILA
Trigger: CGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TGGGAACCTCAATCCATCAGTCCACCCAAAGATGGAGGTGAGGTGAGGGATTTCTCCCACTTTTATAGCTaGGTTGGAAAATGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: WEPQSISPPKDGGEVRDFSHFYS*VGKCLL
Trigger: TAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGGA...GAAATCCCTCACCTCACCTCCATCTTTGGGTGGACTGATGGATTGAGGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp GTTTGGATGGTTAGCCTTTCTTTCCCTCTTGCCCGTGTTAGCCTCACAGACCTGTCCCACTTTTATAGCTaGGTTGGAAAATGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: VWMVSLSFPLARVSLTDLSHFYS*VGKCLL
Trigger: TAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGGA...CAGGTCTGTGAGGCTAACACGGGCAAGAGGGAAAGAAAGGCTAACCATCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTATCTTCAGGTGGTCCTaGGCCTTAAGTAGCCATGAG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFIFRWS*ALSSHE
Trigger: CTCATGGCTACTTAAGGCCAAGGACCACCTGAAGAT...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACACCTTGTTGTCATCATaGTGTATTGCCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDTLLSS*CIAWIR
Trigger: CCTGATCCAGGCAATACACAATGATGACAACAAGGT...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTGGGCACAGATGTCTaGCACTACTGCATCCCCGCT +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLGTDV*HYCIPA
Trigger: AGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTGGGCACAGATGTCTaGCACTACTGCATCCCCGCT +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLGTDV*HYCIPA
Trigger: AGCGGGGATGCAGTAGTGCAAGACATCTGTGCCCAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGERETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGTCTCACCCACCAACTTaGCAGCAGGGACATTCACAA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQSHPPT*QQGHSQ
Trigger: TTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGA...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACACCCCACATTTGCAAATaGAAGTCACTGAGTATGACA +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTPHICK*KSLSMT
Trigger: TGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGCTTCCAGTTTCTGTTaGTCTCAGCATCATGGATGG +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRASSFC*SQHHGW
Trigger: CCATCCATGATGCTGAGACAAACAGAAACTGGAAGC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTCACCCACCAACTTTGCAGCAGGGACATTCACAACAGGCAGCTCTGTGCTTTTACTACTAAAAATCTaGGTTCAGAGGGAAATCCAC +
Preference number: 5 (lower is better)
Translates to: LSPTNFAAGTFTTGSSVLLLLKI*VQREIH
Trigger: GTGGATTTCCCTCTGAACCAAGATTTTTAGTAGTAA...AAGCACAGAGCTGCCTGTTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTAGTGTCAGGGGGTTATaGTCCCGCTTAAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFSVRGL*SRLRLS
Trigger: ACTCAGCCTTAAGCGGGACAATAACCCCCTGACACT...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp TCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATTTTCCCAAACAGGGACGAACAATTCCGCTCACCTaGTTGTCATCATTGTGTATT +
Preference number: 5 (lower is better)
Translates to: SSQRQREAKVHHFPKQGRTIPLT*LSSLCI
Trigger: AATACACAATGATGACAACAAGGTGAGCGGAATTGT...TCGTCCCTGTTTGGGAAAATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp TTTTATTCTGACTGGCACTCCTCCCAAAGGCAACGGGAAGCAAAGGTTCACCATGGTTGTATGGAACTATaGTGGGGAGCAAGGGATAAA +
Preference number: 5 (lower is better)
Translates to: FYSDWHSSQRQREAKVHHGCMEL*WGARDK
Trigger: TTTATCCCTTGCTCCCCACAATAGTTCCATACAACC...ATGGTGAACCTTTGCTTCCCGTTGCCTTTGGGAGGAGTGCCAGTCAGAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTATGTTCATAAGCAGCTaGGATCCCACATACAGCGCC +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCMFISS*DPTYSA
Trigger: GGCGCTGTATGTGGGATCCAAGCTGCTTATGAACAT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676620.1
CDS CCA 90 bp GTGAAATACACTGTGCCTCTGCTTATTCTTCAGAGGGTAGTTGAGTaGGGGCACATTGACCAATGCCCAAATATTGAACCACATGTCTCT +
Preference number: 5 (lower is better)
Translates to: VKYTVPLLILQRVVE*GHIDQCPNIEPHVS
Trigger: AGAGACATGTGGTTCAATATTTGGGCATTGGTCAATGTGCCCCCACTCAACTACCCTCTGAAGAATAAGCAGAGGCACAGTGTATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553399.1
CDS-3UTR CAA 90 bp AAACATGCCTTTGCTGGTGAGGGCAGTGATTTGGGATCTAGGCTAAGACTTTTCGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: KHAFAGEGSDLGSRLRLFVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...GAAAAGTCTTAGCCTAGATCCCAAATCACTGCCCTCACCAGCAAAGGCATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAACTTTCTGTAAGAGCTaGAGAACATCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGETFCKS*RTSSSL
Trigger: CAGGGAGGAAGATGTTCTCAAGCTCTTACAGAAAGT...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVTWPGK*RRDLQH
Trigger: GTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCACTGCACAGATACTGTaGACACCTGGCCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVTAQIL*TPGQVS
Trigger: ACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTATAAGCAAGGGTCTTaGGGACTCCCAGGGAACCCC +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLYKQGS*GLPGNP
Trigger: GGGGTTCCCTGGGAGTCCCAAAGACCCTTGCTTATA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCATCCAGTTGCTCTaGGAGAAGCCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLIQLL*EKPEEG
Trigger: GCCTTCCTCAGGCTTCTCCAAGAGCAACTGGATGAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTGCTTGTCACCACCTaGTGTCTCCACTGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLLVTT*CLHWAS
Trigger: TGAGGCCCAGTGGAGACACAAGGTGGTGACAAGCAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTAACAACTCTGAATGGTTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: IGLAPWLLPGPCSNNSEWFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...CCATTCAGAGTTGTTACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTTATTGCCAACCTTCTTaGTCACATGCCACAGCACAG +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFYCQPS*SHATAQ
Trigger: CTGTGCTGTGGCATGTGACAAAGAAGGTTGGCAATA...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGCACGGGAAACAGGTATaGCCAACCTTCTTTGTCACA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQHGKQV*PTFFVT
Trigger: TGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGTG...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTCACGGGAAACAGGTATaGCCAACCTTCTTTGTCACA +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFHGKQV*PTFFVT
Trigger: TGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGTG...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGTGCTGGTCGAGGGATaGCTCTGTCACTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIVLVEG*LCHFKA
Trigger: TGCCTTGAAGTGACAGAGCAATCCCTCGACCAGCAC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAGGGTCAGCAGAATCTaGGATCCCACATACAGCGCC +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLRVSRI*DPTYSA
Trigger: GGCGCTGTATGTGGGATCCAAGATTCTGCTGACCCT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTCTGTCCAGAGGCCCAATTCCAAAGCCAACCCTTGACTCCCTTTTCTAAGACATCATTTTCCTCCTCTTaGAGATCCAAAATCCATTCC +
Preference number: 5 (lower is better)
Translates to: LCPEAQFQSQPLTPFSKTSFSSS*RSKIHS
Trigger: GGAATGGATTTTGGATCTCAAAGAGGAGGAAAATGA...TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAATTGGGCCTCTGGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTATGGCTCTGGCCGGCTTaGACGAACATCATCTTGGCG +
Preference number: 5 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLWLWPA*TNIILA
Trigger: CGCCAAGATGATGTTCGTCAAAGCCGGCCAGAGCCA...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACACAAAGAGCCAAGTCTaGGCTCTGGCCGGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNTKSQV*ALAGFD
Trigger: GTCAAAGCCGGCCAGAGCCAAGACTTGGCTCTTTGT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGACCTCAACGCCCAGTaGGTAGTACTCGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLDLNAQ*VVLGFQ
Trigger: TTGGAAGCCGAGTACTACCAACTGGGCGTTGAGGTC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGGACACATTTGAGCAGTaGCTGGATCTCACTGTACTT +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRDTFEQ*LDLTVL
Trigger: AAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTC...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAAGACACATTTGAGCAGTaGCTGGATCTCACTGTACTT +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEDTFEQ*LDLTVL
Trigger: AAGTACAGTGAGATCCAGCAACTGCTCAAATGTGTC...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTTCAAAGGCTTTGACTCACTGACACATTaGAGCAGTTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: LFWWCFSVGDYSVVFKGFDSLTH*SSCWIS
Trigger: TGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTC...AAAGCCTTTGAACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGGACTCACTGACACATTaGAGCAGTTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQDSLTH*SSCWIS
Trigger: TGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTC...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGACTCACTGACACATTaGAGCAGTTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCDSLTH*SSCWIS
Trigger: TGAGATCCAGCAACTGCTCAAATGTGTCAGTGAGTC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATCCAAGCCTCAGCTCCACCTCTGATAATACAGAAGCTGAGATACGGGTTGTATACCTTGTTGTCATCATaGTGTATTGCCTGGATCAGG +
Preference number: 5 (lower is better)
Translates to: IQASAPPLIIQKLRYGLYTLLSS*CIAWIR
Trigger: CCTGATCCAGGCAATACACAATGATGACAACAAGGT...ATACAACCCGTATCTCAGCTTCTGTATTATCAGAGGTGGAGCTGAGGCTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGAGAAACATGGCACTaGCGTGAAAGGTCCTATCCT +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQRETWH*RERSYP
Trigger: AGGATAGGACCTTTCACGCAAGTGCCATGTTTCTCT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCTTCTATTCAGACTACCTTCCAAAGACTCCAGGACTTCTTGTGCTTGGGAGAATTCCAAAGCCAACCCTaGACTCCCTTTTCTAAGACA +
Preference number: 5 (lower is better)
Translates to: PSIQTTFQRLQDFLCLGEFQSQP*TPFSKT
Trigger: TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAA...TTCTCCCAAGCACAAGAAGTCCTGGAGTCTTTGGAAGGTAGTCTGAATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGTTCCAAAGCCAACCCTaGACTCCCTTTTCTAAGACA +
Preference number: 5 (lower is better)
Translates to: HQPDVTYSLFPHSDSVQRFQSQP*TPFSKT
Trigger: TGTCTTAGAAAAGGGAGTCAAGGGTTGGCTTTGGAA...CCTCTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACCCCCACATTTGCAAATaGAAGTCACTGAGTATGACA +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDPHICK*KSLSMT
Trigger: TGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGGTGGTGTTTTTCTGTaGGAGACTACAGCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVGGVFL*ETTAWC
Trigger: ACACCACGCTGTAGTCTCCAACAGAAAAACACCACC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS CCA 90 bp AAGGTCTCATACAGCTCCTCGAGGATGTTCTCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAAAGAAACTCAAGCTTTCTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: KVSYSSSRMFSGMSP*RSSDNKRNSSFLRK
Trigger: TTTCCGGAGAAAGCTTGAGTTTCTTTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGAGAACATCCTCGAGGAGCTGTATGAGACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGAT +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLRTGLA*PAQDLD
Trigger: ATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTACTTTCTGTAAGAGCTaGAGAACATCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCTFCKS*RTSSSL
Trigger: CAGGGAGGAAGATGTTCTCAAGCTCTTACAGAAAGT...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGCAGCTCTGACTTTCTaGCTTTGGCTTCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIAALTF*LWLLRR
Trigger: CCTCCTGAGAAGCCAAAGCAAGAAAGTCAGAGCTGC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLLNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCTGAACGATGGTTGCTaGTCACCACCTTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNLNDGC*SPPCVS
Trigger: GGAGACACAAGGTGGTGACAAGCAACCATCGTTCAG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTACTTGGGCCAGTTCTaGGATCACTTCCTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLYLGQF*DHFLVA
Trigger: CGCTACCAGGAAGTGATCCAAGAACTGGCCCAAGTA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFNLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCAATCTTGTGCTCTACTaGGGCCAGTTCTTGGATCAC +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVNLVLY*GQFLDH
Trigger: GTGATCCAAGAACTGGCCCAAGTAGAGCACAAGATT...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCGAGGTGTTGAGCAGCTaGTCAGTCACGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: SFIIYLGFNYRIGTMVTSEVLSS*SVTSEI
Trigger: TATCTCTGACGTGACTGACAAGCTGCTCAACACCTC...GGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCATGACAAGCTGGGTTaGCTGACCTTTAACCTCGGG +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLHDKLG*LTFNLG
Trigger: CCCGAGGTTAAAGGTCAGCAAACCCAGCTTGTCATG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCGGACAGCAGTCAGTaGTCCATAGAAGTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSDSSQ*SIEVGG
Trigger: ACCACCCACTTCTATGGACAACTGACTGCTGTCCGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAGACCTCAACGCCCAGTaGGTAGTACTCGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLDLNAQ*VVLGFQ
Trigger: TTGGAAGCCGAGTACTACCAACTGGGCGTTGAGGTC...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTATCAAGCCCAGTCTTaGTGGAGACCTCAACGCCCA +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIYQAQS*WRPQRP
Trigger: TGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTATCAAGCCCAGTCTTaGTGGAGACCTCAACGCCCA +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNYQAQS*WRPQRP
Trigger: TGGGCGTTGAGGTCTCCACAAAGACTGGGCTTGATA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCATCCTGCACCAGCCTaGAGCCATGATTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLHPAPA*SHDSAD
Trigger: ATCAGCTGAATCATGGCTCAAGGCTGGTGCAGGATG...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AAATCTTGGTTCAGAGGGAAATCCACAGGGTTTCTGAGCACCAGAGACACTGACTCCCACTTTTATAGCTaGGTTGGAAAATGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: KSWFRGKSTGFLSTRDTDSHFYS*VGKCLL
Trigger: TAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGGA...GTCAGTGTCTCTGGTGCTCAGAAACCCTGTGGATTTCCCTCTGAACCAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGCTGCGGGATGTTTCTaGGAGGTAGATCTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNAAGCF*EVDLQV
Trigger: CACCTGAAGATCTACCTCCAAGAAACATCCCGCAGC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACCCTCCCAGCATGACCTaGCAGGCAACATCCATTTTC +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNPPSMT*QATSIF
Trigger: GAAAATGGATGTTGCCTGCAAGGTCATGCTGGGAGG...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTCAGGACTTCTTGTGCTaGGGAGAAGAGACACCTGGA +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIQDFLC*GEETPG
Trigger: TCCAGGTGTCTCTTCTCCCAAGCACAAGAAGTCCTG...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCACCTTTTCTCAAACATaGTCACATCTTGCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTTFSQT*SHLAWE
Trigger: TTCCCACGCAAGATGTGACAATGTTTGAGAAAAGGT...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS TCA 90 bp GATGATTCATTTTCCCAGCACAGAGTGCAGGGAGATACAAAGAAATaGGTTATGCCGAACACATTCTCAATGTTCTCATTCGCGGAGTAC +
Preference number: 5 (lower is better)
Translates to: DDSFSQHRVQGDTKK*VMPNTFSMFSFAEY
Trigger: GTACTCCGCGAATGAGAACATTGAGAATGTGTTCGGCATAACTCATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAAATGAATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347230.9
ENST00000553399.1
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CCA 90 bp ATGTTTAAAAATATCTGTCAGCTGATGGGCAAAGGTGCGAAGTCATaGAGCTTTGCGATAGCTCCTGACAAGTTCTACTTGTGTATGGAG +
Preference number: 5 (lower is better)
Translates to: MFKNICQLMGKGAKS*SFAIAPDKFYLCME
Trigger: CTCCATACACAAGTAGAACTTGTCAGGAGCTATCGCAAAGCTCCATGACTTCGCACCTTTGCCCATCAGCTGACAGATATTTTTAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCGTAGGCAGCCAAGATTaGGGAAGTCTTCTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVVGSQD*GSLLLS
Trigger: TGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTGCTGTTAACAACAGATCTCTCTTaGGTATGGGGTTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VGSQDLGSLLLSTMLVLLTTDLS*VWGCCS
Trigger: AGAGCAGCAACCCCATACCAAAGAGAGATCTGTTGT...TAACAGCACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp AACCACTATCCGATTCTGCTGCATGTTTTGGCAGAAGGAATGAAACATGCCTTTACTTTCTGTAAGAGCTaGAGAACATCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: NHYPILLHVLAEGMKHAFTFCKS*RTSSSL
Trigger: CAGGGAGGAAGATGTTCTCAAGCTCTTACAGAAAGT...AAAGGCATGTTTCATTCCTTCTGCCAAAACATGCAGCAGAATCGGATAGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCACTGCACAGATACTGTaGACACCTGGCCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLTAQIL*TPGQVS
Trigger: ACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTTGCTCAGCTCACTACTaGTACTTTCCAGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLCSAHY*YFPGMG
Trigger: ACCCATCCCTGGAAAGTACAAGTAGTGAGCTGAGCA...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGAGGTGTTGAGCAGCTaGTCAGTCACGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLEVLSS*SVTSEI
Trigger: TATCTCTGACGTGACTGACAAGCTGCTCAACACCTC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCTCTCTGGGGGAACTaGTCTCTCAAACAGGAGATG +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSLWGN*SLKQEM
Trigger: CATCTCCTGTTTGAGAGACAAGTTCCCCCAGAGAGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGGAGGGCTTTCATTCTaGGAGCTGTCTAGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNGGLSF*ELSRAS
Trigger: AGAAGCTCTAGACAGCTCCAAGAATGAAAGCCCTCC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTCCTGGCCCTTGTAGTTCATTTTCCTCCTCTTaGAGATCCAAAATCCATTCC +
Preference number: 5 (lower is better)
Translates to: IWGSTIGLAPWLLPGPCSSFSSS*RSKIHS
Trigger: GGAATGGATTTTGGATCTCAAAGAGGAGGAAAATGA...ACTACAAGGGCCAGGAAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTCTGGAGGACTCTCCTaGTTGAGAAGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNSGGLS*LRRCRR
Trigger: TCTTCTGCACCTTCTCAACAAGGAGAGTCCTCCAGA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCATTATTCCCTCATTCTGACTCTGTCCAGAGGCCCAATTCCAAAGCCAACCTCCCACTTTTATAGCTaGGTTGGAAAATGCCTTCTA +
Preference number: 5 (lower is better)
Translates to: IHYSLILTLSRGPIPKPTSHFYS*VGKCLL
Trigger: TAGAAGGCATTTTCCAACCAAGCTATAAAAGTGGGA...GGTTGGCTTTGGAATTGGGCCTCTGGACAGAGTCAGAATGAGGGAATAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTATCTTCAGGTGGTCCTaGGCCTTAAGTAGCCATGAG +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIIFRWS*ALSSHE
Trigger: CTCATGGCTACTTAAGGCCAAGGACCACCTGAAGAT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAGACTCCAGGACTTCTaGTGCTTGGGAGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIRLQDF*CLGEET
Trigger: TGTCTCTTCTCCCAAGCACAAGAAGTCCTGGAGTCT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTCTCACCCACCAACTTaGCAGCAGGGACATTCACAA +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNISHPPT*QQGHSQ
Trigger: TTGTGAATGTCCCTGCTGCAAAGTTGGTGGGTGAGA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp TTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCCAGACCTTTTCTCAAACATaGTCACATCTTGCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: FHQPDVTYSLFPHSDSVQTFSQT*SHLAWE
Trigger: TTCCCACGCAAGATGTGACAATGTTTGAGAAAAGGT...CTGGACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTGGTGGTGTTTTTCTGTaGGAGACTACAGCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIGGVFL*ETTAWC
Trigger: ACACCACGCTGTAGTCTCCAACAGAAAAACACCACC...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGGTGGTGTTTTTCTGTaGGAGACTACAGCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLGGVFL*ETTAWC
Trigger: ACACCACGCTGTAGTCTCCAACAGAAAAACACCACC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACCATGTCCCACCTTGTaGAGAAGGTGCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLPCPTL*RRCRRA
Trigger: AGCTCTTCTGCACCTTCTCAACAAGGTGGGACATGG...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp CTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACTTTGTCCATGTCCCACCTaGTTGAGAAGGTGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: LLSSSIWGSTIGLAPWLLCPCPT*LRRCRR
Trigger: TCTTCTGCACCTTCTCAACAAGGTGGGACATGGACA...AAGTAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTAGGCAGCCAAGATTTGGGAAGTCTTCTTCTTTCAACAATGTTAGTGCTGTTAACTTTCTGTAAGAGCTaGAGAACATCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VGSQDLGSLLLSTMLVLLTFCKS*RTSSSL
Trigger: CAGGGAGGAAGATGTTCTCAAGCTCTTACAGAAAGT...TAACAGCACTAACATTGTTGAAAGAAGAAGACTTCCCAAATCTTGGCTGCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS-3UTR CAA 90 bp AACATGGGTATCTGTTTTGGTGGTGTTTTTCTGTTGGAGACTACAGCGTGGTGTGAGACTCTTACTGATTaGCTGAAGAACAACTGGAAA +
Preference number: 5 (lower is better)
Translates to: NMGICFGGVFLLETTAWCETLTD*LKNNWK
Trigger: TTTCCAGTTGTTCTTCAGCAAATCAGTAAGAGTCTC...ACACCACGCTGTAGTCTCCAACAGAAAAACACCACCAAAACAGATACCCATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTTTGGGAAGAGCTCTGTaGCAGCAGAACAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNILGRAL*QQNKGI
Trigger: AATCCCTTTGTTCTGCTGCAACAGAGCTCTTCCCAA...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS CCA 90 bp CAGTGGCTTATACTTTCTAAGAACACCAACTGCTTGGGTCTCTATTaGAAAAGGACACACCAGTCCTTGCCCTCAAAAATTGAATGTTTA +
Preference number: 5 (lower is better)
Translates to: QWLILSKNTNCLGLY*KRTHQSLPSKIECL
Trigger: TAAACATTCAATTTTTGAGGGCAAGGACTGGTGTGTCCTTTTCCAATAGAGACCCAAGCAGTTGGTGTTCTTAGAAAGTATAAGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 90 bp GGGGAGATTGCCATCAATCCATTTATACATGGTATTAACTACCAGTaGCTTATACTTTCTAAGAACACCAACTGCTTGGGTCTCTATTGG +
Preference number: 5 (lower is better)
Translates to: GEIAINPFIHGINYQ*LILSKNTNCLGLYW
Trigger: CCAATAGAGACCCAAGCAGTTGGTGTTCTTAGAAAGTATAAGCCACTGGTAGTTAATACCATGTATAAATGGATTGATGGCAATCTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCACTTTCTGTAAGAGCTaGAGAACATCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLTFCKS*RTSSSL
Trigger: CAGGGAGGAAGATGTTCTCAAGCTCTTACAGAAAGT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTTCTGGTTTTCAATCTaGTGCTCTACTTGGGCCAGT +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLFWFSI*CSTWAS
Trigger: ACTGGCCCAAGTAGAGCACAAGATTGAAAACCAGAA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTACACGGGAAACAGGTATaGCCAACCTTCTTTGTCACA +
Preference number: 5 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLHGKQV*PTFFVT
Trigger: TGTGACAAAGAAGGTTGGCAATACCTGTTTCCCGTG...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTCATTTTCCTCCTCTTaGAGATCCAAAATCCATTCC +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVSFSSS*RSKIHS
Trigger: GGAATGGATTTTGGATCTCAAAGAGGAGGAAAATGA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACTTTGTTCAGAAATGCTaGGGCGTAAACATCAGCGCA +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNFVQKC*GVNISA
Trigger: TGCGCTGATGTTTACGCCCAAGCATTTCTGAACAAA...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCGGAGAAGAGTTTCATTaGTTCAGAAATGCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLGEEFH*FRNAWA
Trigger: CGCCCAAGCATTTCTGAACAAATGAAACTCTTCTCC...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp CCCCACATTTGCAAATTGAAGTCACTGAGTATGACACACCTTTTCTCAAACATTAAACATTGTCACATCTaGCGTGGGAAGACAAGACAG +
Preference number: 5 (lower is better)
Translates to: PHICKLKSLSMTHLFSNIKHCHI*RGKTRQ
Trigger: CTGTCTTGTCTTCCCACGCAAGATGTGACAATGTTT...AATGTTTGAGAAAAGGTGTGTCATACTCAGTGACTTCAATTTGCAAATGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCAAACATTGTCACATCTaGCGTGGGAAGACAAGACAG +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLKHCHI*RGKTRQ
Trigger: CTGTCTTGTCTTCCCACGCAAGATGTGACAATGTTT...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp AACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCCTCTCTAACACCTTTTCTCAAACATaGTCACATCTTGCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: NFSPNGSSSFITVFLLSNTFSQT*SHLAWE
Trigger: TTCCCACGCAAGATGTGACAATGTTTGAGAAAAGGT...GTTAGAGAGGAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp GTTTTCCACCAACCAGATGTGACCTATTCATTATTCCCTCATTCTGACTCTGTCTTACTACTAAAAATCTaGGTTCAGAGGGAAATCCAC +
Preference number: 5 (lower is better)
Translates to: VFHQPDVTYSLFPHSDSVLLLKI*VQREIH
Trigger: GTGGATTTCCCTCTGAACCAAGATTTTTAGTAGTAA...GACAGAGTCAGAATGAGGGAATAATGAATAGGTCACATCTGGTTGGTGGAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS-3UTR CAA 90 bp ATTCTTCTTTCATCATCTATTTGGGGTTCAACTATAGGATTGGCACCATGGTTAGGTTCAACTATAGGATaGGCACCATGGTTACTTCCT +
Preference number: 5 (lower is better)
Translates to: ILLSSSIWGSTIGLAPWLGSTIG*APWLLP
Trigger: AGGAAGTAACCATGGTGCCAATCCTATAGTTGAACC...TAACCATGGTGCCAATCCTATAGTTGAACCCCAAATAGATGATGAAAGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS-3UTR CAA 90 bp GAAAAGCCAAACTTTAGCCCAAATGGGTCTAGTAGTTTCATTACAGTCTTTCTCTCATTTTCCTCCTCTTaGAGATCCAAAATCCATTCC +
Preference number: 5 (lower is better)
Translates to: EKPNFSPNGSSSFITVFLSFSSS*RSKIHS
Trigger: GGAATGGATTTTGGATCTCAAAGAGGAGGAAAATGA...GAGAAAGACTGTAATGAAACTACTAGACCCATTTGGGCTAAAGTTTGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347230.9
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS TCA 90 bp GGAGCGAGAGAGAAAAATGAAACTCAAAAAGTTCTCAGCAGGCACTaGAAATATTGCTTGCAAAGAATATTTAACAATGTGCACACCAAC +
Preference number: 5 (lower is better)
Translates to: GAREKNETQKVLSRH*KYCLQRIFNNVHTN
Trigger: GTTGGTGTGCACATTGTTAAATATTCTTTGCAAGCAATATTTTCAGTGCCTGCTGAGAACTTTTTGAGTTTCATTTTTCTCTCTCGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554523.5
CDS TCA 90 bp TATTGGTCTACCTTATTTTTAAGGCAACTGGGTAATATCTATATATaGTACCCATATAGATCTGACCTAGTAATTCTGCTGCTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: YWSTLFLRQLGNIYI*YPYRSDLVILLLGA
Trigger: AGCTCCTAGCAGCAGAATTACTAGGTCAGATCTATATGGGTATCATATATAGATATTACCCAGTTGCCTTAAAAATAAGGTAGACCAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557366.5
CDS CAA 72 bp CCCTGCTCTGCCTGCTCTGGCGGCTCTTCTCCCCCTTaGTCAAGACGGCACGGGAGGGGGCGCAGACCAGCC +
Preference number: 6 (lower is better)
Translates to: PCSACSGGSSPP*SRRHGRGRRPA
Trigger: GGCTGGTCTGCGCCCCCTCCCGTGCCGTCTTGACAAAGGGGGAGAAGAGCCGCCAGAGCAGGCAGAGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp TCCAGAATGCGCAGTGCACCCAGGCGTCGTCCGCTCTaGGCTGGTCCGGCACTCCTCCCTGCTCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SRMRSAPRRRPL*AGPALLPALPA
Trigger: AGCAGGCAGAGCAGGGAGGAGTGCCGGACCAGCTCAGAGCGGACGACGCCTGGGTGCACTGCGCATTCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 72 bp GCATCGACTACCCCAGGGGGCACCGAATCAGGGCCCTaGAAAGCCCGCAATGCCTTTCGAATGAGGTCCACC +
Preference number: 6 (lower is better)
Translates to: ASTTPGGTESGP*KARNAFRMRST
Trigger: GGTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAGGGCCCTGATTCGGTGCCCCCTGGGGTAGTCGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS GCA 72 bp AGACTGGCCCAACCACAGAGATTCACTGCCAGACTCTaGCCCTGCTGCAAAGACCCTCGCAGGGGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: RLAQPQRFTARL*PCCKDPRRGSQ
Trigger: CTGGGAGCCCCTGCGAGGGTCTTTGCAGCAGGGGCAGAGTCTGGCAGTGAATCTCTGTGGTTGGGCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS CAA 72 bp CCAGGCAGCCAGGAGGAAGGCCTCAAACAGAGGGAATaGTTCCAGAAGGCGCTCACACTCCCGGGCTACCTG +
Preference number: 6 (lower is better)
Translates to: PGSQEEGLKQRE*FQKALTLPGYL
Trigger: CAGGTAGCCCGGGAGTGTGAGCGCCTTCTGGAACAATTCCCTCTGTTTGAGGCCTTCCTCCTGGCTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS CAA 72 bp GGAATGAGCTCTTCAGATTACCTGCCTGGCTCCTTCTaGTCCGACGACCCCGGCGGAGACTGGGGTGACGTG +
Preference number: 6 (lower is better)
Translates to: GMSSSDYLPGSF*SDDPGGDWGDV
Trigger: CACGTCACCCCAGTCTCCGCCGGGGTCGTCGGACAAGAAGGAGCCAGGCAGGTAATCTGAAGAGCTCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557366.5
ENST00000557407.1
CDS GCA 72 bp AATGCGGTTCTCTCCACCACCTGTGTGCATGGGAGGTaGCGGACTCGCTGGGCTGTTCATCCTGAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: NAVLSTTCVHGR*RTRWAVHPEKL
Trigger: CAGCTTCTCAGGATGAACAGCCCAGCGAGTCCGGCACCTCCCATGCACACAGGTGGTGGAGAGAACCGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 72 bp TGTGTGAAGGCAATGCGGTTCTCTCCACCACCTGTGTaGATGGGAGGTGCCGGACTCGCTGGGCTGTTCATC +
Preference number: 6 (lower is better)
Translates to: CVKAMRFSPPPV*MGGAGLAGLFI
Trigger: GATGAACAGCCCAGCGAGTCCGGCACCTCCCATGCACACAGGTGGTGGAGAGAACCGCATTGCCTTCACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp CGAATGAGGTCCACCAGTGCATTCTGCAGAGGCCAGTaGCAGAGGCCAGTACCGTCATCCTCCTCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: RMRSTSAFCRGQ*QRPVPSSSSSR
Trigger: CCTGCTTGAGGAGGATGACGGTACTGGCCTCTGTCACTGGCCTCTGCAGAATGCACTGGTGGACCTCATTCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS TCA 72 bp TGCTCAAATCGTCCACATCTCGCCCGTACACTTCAGTaGGCTGAAGGGCCCGGGACCAATCTCTGGCCACCA +
Preference number: 6 (lower is better)
Translates to: CSNRPHLARTLQ*AEGPGTNLWPP
Trigger: TGGTGGCCAGAGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGCGAGATGTGGACGATTTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS GCA 72 bp CTCACACAGGAGATGCAACTCAACCCCAAGTGGTTCTaGGGGGCAACGCAGAGTCCGCAGGGCTCCATAGAT +
Preference number: 6 (lower is better)
Translates to: LTQEMQLNPKWF*GATQSPQGSID
Trigger: ATCTATGGAGCCCTGCGGACTCTGCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS GCA 72 bp GTCCTGCAGGCCTCTAGTAGTTCCTCACACAGGAGATaGAACTCAACCCCAAGTGGTTCTGCGGGGCAACGC +
Preference number: 6 (lower is better)
Translates to: VLQASSSSSHRR*NSTPSGSAGQR
Trigger: GCGTTGCCCCGCAGAACCACTTGGGGTTGAGTTGCATCTCCTGTGTGAGGAACTACTAGAGGCCTGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS GCA 72 bp GGGTCTCCCTCCCTGAGCCAGGCACTCTTCCTGCCTTaGTCTTACCAAGGATACAAAGGGCCTCACTGTGGA +
Preference number: 6 (lower is better)
Translates to: GSPSLSQALFLP*SYQGYKGPHCG
Trigger: TCCACAGTGAGGCCCTTTGTATCCTTGGTAAGAGCAAGGCAGGAAGAGTGCCTGGCTCAGGGAGGGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554523.5
CDS CAA 90 bp CTTTCCAAGCCTCGGCTGGGTTGGGATTGGAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGATGATCCGGTGAGACTTTTCCCGAGG +
Preference number: 6 (lower is better)
Translates to: LSKPRLGWDWRTGLA*PAQDLDDPVRLFPR
Trigger: CCTCGGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CAA 90 bp GGGAGGTGCCGGACTCGCTGGGCTGTTCATCCTGAGAAGCTGAGTTaGTGCCTGATGATGCAATCCAGGTTTGGGTTGGGCCTGCAAACA +
Preference number: 6 (lower is better)
Translates to: GRCRTRWAVHPEKLS*CLMMQSRFGLGLQT
Trigger: TGTTTGCAGGCCCAACCCAAACCTGGATTGCATCATCAGGCACAAACTCAGCTTCTCAGGATGAACAGCCCAGCGAGTCCGGCACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp TCAGGAGATCCCAGAGCACAGAGACAGCTTCGGAGCTaGGACGAGGAGTCCAGCTCTCCCTCCTTGGATTTC +
Preference number: 6 (lower is better)
Translates to: SGDPRAQRQLRS*DEESSSPSLDF
Trigger: GAAATCCAAGGAGGGAGAGCTGGACTCCTCGTCTCAGCTCCGAAGCTGTCTCTGTGCTCTGGGATCTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS TCA 72 bp AATCAGGGCCCTGCAAAGCCCGCAATGCCTTTCGAATaGGGTCCACCAGTGCATTCTGCAGAGGCCAGTGAC +
Preference number: 6 (lower is better)
Translates to: NQGPAKPAMPFE*GPPVHSAEASD
Trigger: GTCACTGGCCTCTGCAGAATGCACTGGTGGACCTCATTCGAAAGGCATTGCGGGCTTTGCAGGGCCCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS TCA 72 bp GAGAACAGGGCTAGCATTGCCCGCTCAGGATCTAGATaGTCCGGTGAGACTTTTCCCGAGGCTGTAGCCCTC +
Preference number: 6 (lower is better)
Translates to: ENRASIARSGSR*SGETFPEAVAL
Trigger: GAGGGCTACAGCCTCGGGAAAAGTCTCACCGGATCATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS TCA 72 bp AAATCGTCCACATCTCGCCCGTACACTTCAGTGAGCTaGAGGGCCCGGGACCAATCTCTGGCCACCAAGGAT +
Preference number: 6 (lower is better)
Translates to: KSSTSRPYTSVS*RARDQSLATKD
Trigger: ATCCTTGGTGGCCAGAGATTGGTCCCGGGCCCTTCAGCTCACTGAAGTGTACGGGCGAGATGTGGACGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS GCA 72 bp TTTGAGCTGTGTCCATGTCCCACCTTGTTGAGAAGGTaGAGAAGAGCTTCCCGCAGGCAGCTGTGCCTCACG +
Preference number: 6 (lower is better)
Translates to: FELCPCPTLLRR*RRASRRQLCLT
Trigger: CGTGAGGCACAGCTGCCTGCGGGAAGCTCTTCTGCACCTTCTCAACAAGGTGGGACATGGACACAGCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS CCA 72 bp GTCCAGCTCTCCCTCCTTGGATTTCCGTCAGGCACGTaGCCTACTGCACCCTGTGTTAAGGTCTCATACAGC +
Preference number: 6 (lower is better)
Translates to: VQLSLLGFPSGT*PTAPCVKVSYS
Trigger: GCTGTATGAGACCTTAACACAGGGTGCAGTAGGCCACGTGCCTGACGGAAATCCAAGGAGGGAGAGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CAA 72 bp CCTCGGCTGGGTTGGGATTGGAGAACAGGGCTAGCATaGCCCGCTCAGGATCTAGATGATCCGGTGAGACTT +
Preference number: 6 (lower is better)
Translates to: PRLGWDWRTGLA*PAQDLDDPVRL
Trigger: AAGTCTCACCGGATCATCTAGATCCTGAGCGGGCAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS TCA 72 bp CTTCCTTCTGGGTGCCATTTGCTGAGGTCCACATGGTaGTCTGAGCTACAGAGCTGCCACTGCCTGGACTCA +
Preference number: 6 (lower is better)
Translates to: LPSGCHLLRSTW*SELQSCHCLDS
Trigger: TGAGTCCAGGCAGTGGCAGCTCTGTAGCTCAGATCACCATGTGGACCTCAGCAAATGGCACCCAGAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 72 bp AATAGGCCACTTTCCAAGCCTCGGCTGGGTTGGGATTaGAGAACAGGGCTAGCATTGCCCGCTCAGGATCTA +
Preference number: 6 (lower is better)
Translates to: NRPLSKPRLGWD*RTGLALPAQDL
Trigger: TAGATCCTGAGCGGGCAATGCTAGCCCTGTTCTCCAATCCCAACCCAGCCGAGGCTTGGAAAGTGGCCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CAA 72 bp CACTGCCTTTTTGAGCTGTGTCCATGTCCCACCTTGTaGAGAAGGTGCAGAAGAGCTTCCCGCAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: HCLFELCPCPTL*RRCRRASRRQL
Trigger: CAGCTGCCTGCGGGAAGCTCTTCTGCACCTTCTCAACAAGGTGGGACATGGACACAGCTCAAAAAGGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS CAA 72 bp AGGCACTGCCTTTTTGAGCTGTGTCCATGTCCCACCTaGTTGAGAAGGTGCAGAAGAGCTTCCCGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RHCLFELCPCPT*LRRCRRASRRQ
Trigger: CTGCCTGCGGGAAGCTCTTCTGCACCTTCTCAACAAGGTGGGACATGGACACAGCTCAAAAAGGCAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS TCA 72 bp CCCAGCAGTTTGGGAGGCAGAGGTGAGCGGATCATCTaGGGTCAGAAGTTTGAAACCAGCCTTGCCAACATG +
Preference number: 6 (lower is better)
Translates to: PSSLGGRGERII*GQKFETSLANM
Trigger: CATGTTGGCAAGGCTGGTTTCAAACTTCTGACCTCAGATGATCCGCTCACCTCTGCCTCCCAAACTGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp ACTGCCTTTTTGAGCTGTGTCCATGTCCCACCTTGTTaGGAAGGTGCAGAAGAGCTTCCCGCAGGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: TAFLSCVHVPPC*EGAEELPAGSC
Trigger: ACAGCTGCCTGCGGGAAGCTCTTCTGCACCTTCTCAACAAGGTGGGACATGGACACAGCTCAAAAAGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555452.1
CDS CCA 72 bp GTCCAAGTTCTTGCTCTACCACATGCTAGCCGCATGTaGATGTGGATGTGGATGTGCCCCTTTAACCTCCCC +
Preference number: 6 (lower is better)
Translates to: VQVLALPHASRM*MWMWMCPFNLP
Trigger: GGGGAGGTTAAAGGGGCACATCCACATCCACATCCACATGCGGCTAGCATGTGGTAGAGCAAGAACTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 72 bp GCTGAGGTCCAAGGAAATGGCCAGCTAAAGAGTATATaGCAGGTGAGGGCATCAGAACCGGAATGTGGGTGC +
Preference number: 6 (lower is better)
Translates to: AEVQGNGQLKSI*QVRASEPECGC
Trigger: GCACCCACATTCCGGTTCTGATGCCCTCACCTGCCATATACTCTTTAGCTGGCCATTTCCTTGGACCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 72 bp GCCTTGCTCTTACCAAGGATACAAAGGGCCTCACTGTaGACTCTAGGTACTCAACCACATCCTGCACCAGCC +
Preference number: 6 (lower is better)
Translates to: ALLLPRIQRASL*TLGTQPHPAPA
Trigger: GGCTGGTGCAGGATGTGGTTGAGTACCTAGAGTCCACAGTGAGGCCCTTTGTATCCTTGGTAAGAGCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554523.5
CDS CAA 72 bp GTTAGGGCTGGATTTCAGACCCCTGGGTCCAAGTTCTaGCTCTACCACATGCTAGCCGCATGTGGATGTGGA +
Preference number: 6 (lower is better)
Translates to: VRAGFQTPGSKF*LYHMLAACGCG
Trigger: TCCACATCCACATGCGGCTAGCATGTGGTAGAGCAAGAACTTGGACCCAGGGGTCTGAAATCCAGCCCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 72 bp AGACAATTCCGCTCACCTTGTTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCAGCTCCTGGGGCGGAA +
Preference number: 6 (lower is better)
Translates to: RQFRSPCCHHCV*PGSGPPAPGAE
Trigger: TTCCGCCCCAGGAGCTGGAGGGCCTGATCCAGGCAATACACAATGATGACAACAAGGTGAGCGGAATTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS CAA 90 bp ACTCAGGGAGTTAGGGCTGGATTTCAGACCCCTGGGTCCAAGTTCTaGCTCTACCACATGCTAGCCGCATGTGGATGTGGATGTGGATGT +
Preference number: 6 (lower is better)
Translates to: TQGVRAGFQTPGSKF*LYHMLAACGCGCGC
Trigger: ACATCCACATCCACATCCACATGCGGCTAGCATGTGGTAGAGCAAGAACTTGGACCCAGGGGTCTGAAATCCAGCCCTAACTCCCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 90 bp CATCACCAGCGTTTGGAGACAATTCCGCTCACCTTGTTGTCATCATaGTGTATTGCCTGGATCAGGCCCTCCAGCTCCTGGGGCGGAATT +
Preference number: 6 (lower is better)
Translates to: HHQRLETIPLTLLSS*CIAWIRPSSSWGGI
Trigger: AATTCCGCCCCAGGAGCTGGAGGGCCTGATCCAGGCAATACACAATGATGACAACAAGGTGAGCGGAATTGTCTCCAAACGCTGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS TCA 72 bp CACAAAGTGCTAGGGGAACGTCCTCTCTCTTCGGTGTaGACTCTGTCCCTCAATGCTGCCAAGATTGGCACT +
Preference number: 6 (lower is better)
Translates to: HKVLGERPLSSV*TLSLNAAKIGT
Trigger: AGTGCCAATCTTGGCAGCATTGAGGGACAGAGTTCACACCGAAGAGAGAGGACGTTCCCCTAGCACTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp TTAAACCTAGGGTGCTTCCTTCTGGGTGCCATTTGCTaGGGTCCACATGGTGATCTGAGCTACAGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LNLGCFLLGAIC*GPHGDLSYRAA
Trigger: GGCAGCTCTGTAGCTCAGATCACCATGTGGACCTCAGCAAATGGCACCCAGAAGGAAGCACCCTAGGTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 72 bp TCAGGTCAGGCTGGTTCTTATTCCTTAATGATTCTGTaGTCTCCTGGAGCACTGGGTGAGCTGCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: SGQAGSYSLMIL*SPGALGELLAL
Trigger: CAGAGCCAGCAGCTCACCCAGTGCTCCAGGAGAGCACAGAATCATTAAGGAATAAGAACCAGCCTGACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 72 bp ATATGGCAGGTGAGGGCATCAGAACCGGAATGTGGGTaGTCAGCTTTAAACCTAGGGTGCTTCCTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: IWQVRASEPECG*SALNLGCFLLG
Trigger: ACCCAGAAGGAAGCACCCTAGGTTTAAAGCTGAGCACCCACATTCCGGTTCTGATGCCCTCACCTGCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 72 bp CCAAGATTGGCACTATCTTGTTGTCATCATTGTGTATaGCCTGGATCAGGCCCTCCAGCTCCTGGGGCGGAA +
Preference number: 6 (lower is better)
Translates to: PRLALSCCHHCV*PGSGPPAPGAE
Trigger: TTCCGCCCCAGGAGCTGGAGGGCCTGATCCAGGCAATACACAATGATGACAACAAGATAGTGCCAATCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 90 bp GGCCAACCATTTCTCCAGTACAAGAAGCCAGACCCAGGCTACTCTTaGAGGGTTGATGTCCTGCCCACATCTCAGCAGATTTGGACACAC +
Preference number: 6 (lower is better)
Translates to: GQPFLQYKKPDPGYS*RVDVLPTSQQIWTH
Trigger: GTGTGTCCAAATCTGCTGAGATGTGGGCAGGACATCAACCCTCAAAGAGTAGCCTGGGTCTGGCTTCTTGTACTGGAGAAATGGTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CAA 90 bp ATTCATTGGCATCACCAGCGTTTGGAGACAATTCCGCTCACCTTGTaGTCATCATTGTGTATTGCCTGGATCAGGCCCTCCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: IHWHHQRLETIPLTL*SSLCIAWIRPSSSW
Trigger: CCAGGAGCTGGAGGGCCTGATCCAGGCAATACACAATGATGACAACAAGGTGAGCGGAATTGTCTCCAAACGCTGGTGATGCCAATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS TCA 72 bp TGTGGGGAGCAAGGGATAAAGGTGACTAGGCAAGCCTaGGACACAATTCATTGGCATCACCAGCGTTTGGAG +
Preference number: 6 (lower is better)
Translates to: CGEQGIKVTRQA*DTIHWHHQRLE
Trigger: CTCCAAACGCTGGTGATGCCAATGAATTGTGTCTCAGGCTTGCCTAGTCACCTTTATCCCTTGCTCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS GCA 72 bp CTTCAGAGGGTAGTTGAGTGGGGGCACATTGACCAATaGCCAAATATTGAACCACATGTCTCTCACCCTGGG +
Preference number: 6 (lower is better)
Translates to: LQRVVEWGHIDQ*PNIEPHVSHPG
Trigger: CCCAGGGTGAGAGACATGTGGTTCAATATTTGGGCATTGGTCAATGTGCCCCCACTCAACTACCCTCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553399.1
CDS CAA 72 bp CATCACCAGCGTTTGGAGACAATTCCGCTCACCTTGTaGTCATCATTGTGTATTGCCTGGATCAGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: HHQRLETIPLTL*SSLCIAWIRPS
Trigger: GGAGGGCCTGATCCAGGCAATACACAATGATGACAACAAGGTGAGCGGAATTGTCTCCAAACGCTGGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS CAA 72 bp TGGCATCACCAGCGTTTGGAGACAATTCCGCTCACCTaGTTGTCATCATTGTGTATTGCCTGGATCAGGCCC +
Preference number: 6 (lower is better)
Translates to: WHHQRLETIPLT*LSSLCIAWIRP
Trigger: GGGCCTGATCCAGGCAATACACAATGATGACAACAAGGTGAGCGGAATTGTCTCCAAACGCTGGTGATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS CAA 72 bp TACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCACCAGGCTCTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: YCTDTVDTWPGK*RRDLQHQALAG
Trigger: CCCAGCAAGAGCCTGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677026.1
CDS CAA 90 bp GATTTGGACACACCACCAATGCCTGAAGTATGTCTTCTACCCTCTTaGGGATATCCCCTTGTCCCTCCTGTAGCTGAGGTACACATGCCT +
Preference number: 6 (lower is better)
Translates to: DLDTPPMPEVCLLPS*GYPLVPPVAEVHMP
Trigger: AGGCATGTGTACCTCAGCTACAGGAGGGACAAGGGGATATCCCAAAGAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347230.9
ENST00000553399.1
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CAA 90 bp ACAATTCATTGGCATCACCAGCGTTTGGAGACAATTCCGCTCACCTaGTTGTCATCATTGTGTATTGCCTGGATCAGGCCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TIHWHHQRLETIPLT*LSSLCIAWIRPSSS
Trigger: GGAGCTGGAGGGCCTGATCCAGGCAATACACAATGATGACAACAAGGTGAGCGGAATTGTCTCCAAACGCTGGTGATGCCAATGAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS TCA 72 bp CAAGCAGCATTACACCACTTGCCTAGTGCATGGGAATaGGCTCTTCAGATTACCTGCCTGGCTCCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: QAALHHLPSAWE*ALQITCLAPSC
Trigger: ACAAGAAGGAGCCAGGCAGGTAATCTGAAGAGCTCATTCCCATGCACTAGGCAAGTGGTGTAATGCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557366.5
ENST00000557407.1
CDS GCA 72 bp ACCTTCTTTGTCACATGCCACAGCACAGCTCAGGACTaGATCCTTTATGCTGCTCAAATCGTCCACATCTCG +
Preference number: 6 (lower is better)
Translates to: TFFVTCHSTAQD*ILYAAQIVHIS
Trigger: CGAGATGTGGACGATTTGAGCAGCATAAAGGATGCAGTCCTGAGCTGTGCTGTGGCATGTGACAAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000555452.1
ENST00000676512.1
ENST00000676620.1
ENST00000678386.1
CDS TCA 72 bp CAAAGGTGCGAAGTCATGGAGCTTTGCGATAGCTCCTaGCAAGTTCTACTTGTGTATGGAGGCAACATGTGG +
Preference number: 6 (lower is better)
Translates to: QRCEVMELCDSS*QVLLVYGGNMW
Trigger: CCACATGTTGCCTCCATACACAAGTAGAACTTGTCAGGAGCTATCGCAAAGCTCCATGACTTCGCACCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 72 bp CTGCCCACATCTCAGCAGATTTGGACACACCACCAATaGCTGAAGTATGTCTTCTACCCTCTTTGGGATATC +
Preference number: 6 (lower is better)
Translates to: LPTSQQIWTHHQ*LKYVFYPLWDI
Trigger: GATATCCCAAAGAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCAAATCTGCTGAGATGTGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CCA 72 bp GAGAGTCAGGAATACTGCACAGATACTGTTGACACCTaGCCAGGTAAGTTGAGAAGAGATTTGCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: ESQEYCTDTVDT*PGKLRRDLQHQ
Trigger: CTGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTATTCCTGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677026.1
CDS CAA 72 bp CTGAGTTTGTGCCTGATGATGCAATCCAGGTTTGGGTaGGGCCTGCAAACAGAATGCCGTTGCTTTGTTAAG +
Preference number: 6 (lower is better)
Translates to: LSLCLMMQSRFG*GLQTECRCFVK
Trigger: CTTAACAAAGCAACGGCATTCTGTTTGCAGGCCCAACCCAAACCTGGATTGCATCATCAGGCACAAACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 72 bp TTCCAGTTCCCTCAGGGTGGCAAAGTAATCGTCATCTaGCTGACAGCACAGGGAGCGAGAGAGAAAAATGAA +
Preference number: 6 (lower is better)
Translates to: FQFPQGGKVIVI*LTAQGAREKNE
Trigger: TTCATTTTTCTCTCTCGCTCCCTGTGCTGTCAGCAAGATGACGATTACTTTGCCACCCTGAGGGAACTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554523.5
CDS CAA 72 bp TACTGCACAGATACTGTTGACACCTGGCCAGGTAAGTaGAGAAGAGATTTGCAGCACCTGCTCTGCTGTATG +
Preference number: 6 (lower is better)
Translates to: YCTDTVDTWPGK*RRDLQHLLCCM
Trigger: CATACAGCAGAGCAGGTGCTGCAAATCTCTTCTCAACTTACCTGGCCAGGTGTCAACAGTATCTGTGCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554557.5
CDS CAA 90 bp CCTGAGAAGCTGAGTTTGTGCCTGATGATGCAATCCAGGTTTGGGTaGGGCCTGCAAACAGAATGCCGTTGCTTTGTTAAGGAAACTTAC +
Preference number: 6 (lower is better)
Translates to: PEKLSLCLMMQSRFG*GLQTECRCFVKETY
Trigger: GTAAGTTTCCTTAACAAAGCAACGGCATTCTGTTTGCAGGCCCAACCCAAACCTGGATTGCATCATCAGGCACAAACTCAGCTTCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 90 bp GCCTGGTTCTGGCACTGTCTGGGATCCACTCTGAATTTCCTTCTATaGATGAACCTTCAGCATCCTCCCAATGCAGTGCTTCTTAATCTT +
Preference number: 6 (lower is better)
Translates to: AWFWHCLGSTLNFLL*MNLQHPPNAVLLNL
Trigger: AAGATTAAGAAGCACTGCATTGGGAGGATGCTGAAGGTTCATCAATAGAAGGAAATTCAGAGTGGATCCCAGACAGTGCCAGAACCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554783.1
CDS GCA 72 bp ACGTCCTCTCTCTTCGGTGTGAACTCTGTCCCTCAATaGTGCCAAGATTGGCACTATCTTGTTGTCATCATT +
Preference number: 6 (lower is better)
Translates to: TSSLFGVNSVPQ*CQDWHYLVVII
Trigger: AATGATGACAACAAGATAGTGCCAATCTTGGCAGCATTGAGGGACAGAGTTCACACCGAAGAGAGAGGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS GCA 72 bp GATCCCTTACCTCAGCAGATTTGGACACACCACCAATaGCTGAAGTATGTCTTCTACCCTCTTTGGGATATC +
Preference number: 6 (lower is better)
Translates to: DPLPQQIWTHHQ*LKYVFYPLWDI
Trigger: GATATCCCAAAGAGGGTAGAAGACATACTTCAGGCATTGGTGGTGTGTCCAAATCTGCTGAGGTAAGGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553399.1
CDS GCA 72 bp GGAAACTCAGAATCTGCTCGAGGAAGTGTTTGTTGTTaGTCAGGCAGTAGAAATAGGCCACTTTCCAAGCCT +
Preference number: 6 (lower is better)
Translates to: GNSESARGSVCC*SGSRNRPLSKP
Trigger: AGGCTTGGAAAGTGGCCTATTTCTACTGCCTGAGCAACAACAAACACTTCCTCGAGCAGATTCTGAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678382.1
CDS CCA 72 bp AATATCTGTCAGCTGATGGGCAAAGGTGCGAAGTCATaGAGCTTTGCGATAGCTCCTGACAAGTTCTACTTG +
Preference number: 6 (lower is better)
Translates to: NICQLMGKGAKS*SFAIAPDKFYL
Trigger: CAAGTAGAACTTGTCAGGAGCTATCGCAAAGCTCCATGACTTCGCACCTTTGCCCATCAGCTGACAGATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 72 bp ACTGTGCCTCTGCTTATTCTTCAGAGGGTAGTTGAGTaGGGGCACATTGACCAATGCCCAAATATTGAACCA +
Preference number: 6 (lower is better)
Translates to: TVPLLILQRVVE*GHIDQCPNIEP
Trigger: TGGTTCAATATTTGGGCATTGGTCAATGTGCCCCCACTCAACTACCCTCTGAAGAATAAGCAGAGGCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553399.1
CDS CAA 72 bp TGGCACTGTCTGGGATCCACTCTGAATTTCCTTCTATaGATGAACCTTCAGCATCCTCCCAATGCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: WHCLGSTLNFLL*MNLQHPPNAVL
Trigger: AAGCACTGCATTGGGAGGATGCTGAAGGTTCATCAATAGAAGGAAATTCAGAGTGGATCCCAGACAGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554783.1
CDS CCA 72 bp AAGCCTGAGACACAATTCATTGGCATCACCAGCGTTTaGAGACAATTCCGCTCACCTTGTTGTCATCATTGT +
Preference number: 6 (lower is better)
Translates to: KPETQFIGITSV*RQFRSPCCHHC
Trigger: ACAATGATGACAACAAGGTGAGCGGAATTGTCTCCAAACGCTGGTGATGCCAATGAATTGTGTCTCAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557306.1
CDS CAA 90 bp GAATGCCATCAGGAGGAGAAGAAAGAGGGAGGAGAGAAGGGGAGATaGCCATCAATCCATTTATACATGGTATTAACTACCAGTGGCTTA +
Preference number: 6 (lower is better)
Translates to: ECHQEEKKEGGEKGR*PSIHLYMVLTTSGL
Trigger: TAAGCCACTGGTAGTTAATACCATGTATAAATGGATTGATGGCAATCTCCCCTTCTCTCCTCCCTCTTTCTTCTCCTCCTGATGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 72 bp CAGGAGGAGAAGAAAGAGGGAGGAGAGAAGGGGAGATaGCCATCAATCCATTTATACATGGTATTAACTACC +
Preference number: 6 (lower is better)
Translates to: QEEKKEGGEKGR*PSIHLYMVLTT
Trigger: GGTAGTTAATACCATGTATAAATGGATTGATGGCAATCTCCCCTTCTCTCCTCCCTCTTTCTTCTCCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 90 bp TGCAATCCAGGTTTGGGTTGGGCCTGCAAACAGAATGCCGTTGCTTaGTTAAGGAAACTTACAGTACAAACTTATGTGTTGGGAAGAGTT +
Preference number: 6 (lower is better)
Translates to: CNPGLGWACKQNAVA*LRKLTVQTYVLGRV
Trigger: AACTCTTCCCAACACATAAGTTTGTACTGTAAGTTTCCTTAACAAAGCAACGGCATTCTGTTTGCAGGCCCAACCCAAACCTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 72 bp TACAGCTCCTCGAGGATGTTCTCTGGAATGTCACCTTaGAGGTCTTCTGACAATAAAAGAAACTCAAGCTTT +
Preference number: 6 (lower is better)
Translates to: YSSSRMFSGMSP*RSSDNKRNSSF
Trigger: AAAGCTTGAGTTTCTTTTATTGTCAGAAGACCTCCAAGGTGACATTCCAGAGAACATCCTCGAGGAGCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347230.9
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CAA 72 bp GGTTTGGGTTGGGCCTGCAAACAGAATGCCGTTGCTTaGTTAAGGAAACTTACAGTACAAACTTATGTGTTG +
Preference number: 6 (lower is better)
Translates to: GLGWACKQNAVA*LRKLTVQTYVL
Trigger: CAACACATAAGTTTGTACTGTAAGTTTCCTTAACAAAGCAACGGCATTCTGTTTGCAGGCCCAACCCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp TTTTCCCAGCACAGAGTGCAGGGAGATACAAAGAAATaGGTTATGCCGAACACATTCTCAATGTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: FSQHRVQGDTKK*VMPNTFSMFSF
Trigger: GAATGAGAACATTGAGAATGTGTTCGGCATAACTCATTTCTTTGTATCTCCCTGCACTCTGTGCTGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347230.9
ENST00000553399.1
ENST00000554523.5
ENST00000554557.5
ENST00000555452.1
ENST00000557366.5
ENST00000557407.1
ENST00000676512.1
ENST00000676620.1
ENST00000677026.1
ENST00000678382.1
ENST00000678386.1
CDS CCA 72 bp ATACTTTCTAAGAACACCAACTGCTTGGGTCTCTATTaGAAAAGGACACACCAGTCCTTGCCCTCAAAAATT +
Preference number: 6 (lower is better)
Translates to: ILSKNTNCLGLY*KRTHQSLPSKI
Trigger: AATTTTTGAGGGCAAGGACTGGTGTGTCCTTTTCCAATAGAGACCCAAGCAGTTGGTGTTCTTAGAAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 72 bp AGCTTTCTGAAAGCTTTTAAAGAAGACTGTCGCTGTTaGTTATGCCATGGAGATCTGGATCGTTTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: SFLKAFKEDCRC*LCHGDLDRFSP
Trigger: AGGAGAAAAACGATCCAGATCTCCATGGCATAACCAACAGCGACAGTCTTCTTTAAAAGCTTTCAGAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 72 bp TCATGGAGCTTTGCGATAGCTCCTGACAAGTTCTACTaGTGTATGGAGGCAACATGTGGAAAAACAAGAAAA +
Preference number: 6 (lower is better)
Translates to: SWSFAIAPDKFY*CMEATCGKTRK
Trigger: TTTTCTTGTTTTTCCACATGTTGCCTCCATACACAAGTAGAACTTGTCAGGAGCTATCGCAAAGCTCCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp TGGATGTATACTATAGAGGTAAAATTTCAGAGCACGTaGAATACACTGTGCCTCTGCTTATTCTTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: WMYTIEVKFQST*NTLCLCLFFRG
Trigger: CCCTCTGAAGAATAAGCAGAGGCACAGTGTATTTCACGTGCTCTGAAATTTTACCTCTATAGTATACATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553399.1
CDS GCA 72 bp CTGAAAGCTTTTAAAGAAGACTGTCGCTGTTGGTTATaGCATGGAGATCTGGATCGTTTTTCTCCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: LKAFKEDCRCWL*HGDLDRFSPSL
Trigger: TAAAGAAGGAGAAAAACGATCCAGATCTCCATGGCATAACCAACAGCGACAGTCTTCTTTAAAAGCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 72 bp GGAAACTTACAGTACAAACTTATGTGTTGGGAAGAGTaGCTTTTCTGGCTTTATTTTATACTCGTGTGCCGC +
Preference number: 6 (lower is better)
Translates to: GNLQYKLMCWEE*LFWLYFILVCR
Trigger: GCGGCACACGAGTATAAAATAAAGCCAGAAAAGCAACTCTTCCCAACACATAAGTTTGTACTGTAAGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CAA 90 bp AATGCCGTTGCTTTGTTAAGGAAACTTACAGTACAAACTTATGTGTaGGGAAGAGTTGCTTTTCTGGCTTTATTTTATACTCGTGTGCCG +
Preference number: 6 (lower is better)
Translates to: NAVALLRKLTVQTYV*GRVAFLALFYTRVP
Trigger: CGGCACACGAGTATAAAATAAAGCCAGAAAAGCAACTCTTCCCAACACATAAGTTTGTACTGTAAGTTTCCTTAACAAAGCAACGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS CCA 72 bp GCCATCAATCCATTTATACATGGTATTAACTACCAGTaGCTTATACTTTCTAAGAACACCAACTGCTTGGGT +
Preference number: 6 (lower is better)
Translates to: AINPFIHGINYQ*LILSKNTNCLG
Trigger: ACCCAAGCAGTTGGTGTTCTTAGAAAGTATAAGCCACTGGTAGTTAATACCATGTATAAATGGATTGATGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394455.6
CDS TCA 72 bp AGGCAGAACAGGCAGGATACACAATTCTACATATTATaGTATGGGACAACCCCAGTTTCATTAAACAACATA +
Preference number: 6 (lower is better)
Translates to: RQNRQDTQFYIL*YGTTPVSLNNI
Trigger: TATGTTGTTTAATGAAACTGGGGTTGTCCCATATCATAATATGTAGAATTGTGTATCCTGCCTGTTCTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554523.5