RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFYVE21 (Homo sapiens)

Ensembl gene IDs: ENSG00000100711

Ensembl transcript IDs: ENST00000216602.10, ENST00000311141.7, ENST00000553512.5, ENST00000553724.1, ENST00000554255.5, ENST00000554630.5, ENST00000554757.1, ENST00000555163.2, ENST00000555501.1, ENST00000556610.5, ENST00000556795.1, ENST00000602552.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACATaGGCCGCAGCGGCACCTTCTGGCTGCAGCACCTGTCGCAGAAGC +
Preference number: 1 (lower is better)
Translates to: RGRTPRTAARGPQST*AAAAPSGCSTCRRS
Trigger: GCTTCTGCGACAGGTGCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR GCA 90 bp GCACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTaGAGCACCTGTCGCAGAAGCACTTCCCGCAGCGGCGACAGTGGT +
Preference number: 1 (lower is better)
Translates to: ARGPQSTCAAAAPSG*STCRRSTSRSGDSG
Trigger: ACCACTGTCGCCGCTGCGGGAAGTGCTTCTGCGACAGGTGCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR-3UTR CCA 90 bp CGCACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACGGCGACAGTGGTGCTaGGCAGATGCGGGAGGATTG +
Preference number: 2 (lower is better)
Translates to: RTPRTAARGPQSTCAAAARRQWC*ADAGGL
Trigger: CAATCCTCCCGCATCTGCCCAGCACCACTGTCGCCG...TGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR-3UTR CCA 90 bp CACTGCCGCACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTGCCGCAGCGGCGACAGTaGTGCTGGGCAGATGCGGGA +
Preference number: 2 (lower is better)
Translates to: HCRTGSTKHMRRSGTFWLPQRRQ*CWADAG
Trigger: TCCCGCATCTGCCCAGCACCACTGTCGCCGCTGCGG...CAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR-3UTR GCA 90 bp TGCCGCACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTGCAGCAGCGGCGACAGTGGTaGTGGGCAGATGCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: CRTGSTKHMRRSGTFWLQQRRQW*WADAGG
Trigger: TCCTCCCGCATCTGCCCAGCACCACTGTCGCCGCTG...CTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR-3UTR CCA 90 bp GGCTCCGCTCAGGAGCACTTTGAGCTGCTTGTCGTAGAACTCCGCCTCCTTGAGCGCAGCGGCACCTTCTaGCTGCAGCACCTGTCGCAG +
Preference number: 2 (lower is better)
Translates to: GSAQEHFELLVVELRLLERSGTF*LQHLSQ
Trigger: CTGCGACAGGTGCTGCAGCCAGAAGGTGCCGCTGCG...CTCAAGGAGGCGGAGTTCTACGACAAGCAGCTCAAAGTGCTCCTGAGCGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR-3UTR GCA 90 bp TCTGAGTTTCCAAACGTGACGAGGAAGGTGGCTCCGCTCAGGAGCACTTTGAGCGCGGCACCTTCTGGCTaGAGCACCTGTCGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: SEFPNVTRKVAPLRSTLSAAPSG*STCRRS
Trigger: GCTTCTGCGACAGGTGCTGCAGCCAGAAGGTGCCGC...GCTCAAAGTGCTCCTGAGCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR-3UTR GCA 90 bp TGTAAACTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTGCAAGGAGCAGGCTCTaGTGTTCCAAGCGACTCAGT +
Preference number: 2 (lower is better)
Translates to: CKLAIRGEQAPLQTRSLSARSRL*CSKRLS
Trigger: ACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGC...ACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAGTTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
3UTR-3UTR TCA 90 bp CACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCAAATGCAGACCAGAAGCCTaGGTTCCTACTGCCCAAACT +
Preference number: 2 (lower is better)
Translates to: HVPLGEVSKDHSQPRSPKCRPEA*VPTAQT
Trigger: AGTTTGGGCAGTAGGAACTCAGGCTTCTGGTCTGCA...TTTGGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
3UTR-3UTR TCA 90 bp CCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCAGTTTCTCCAAATACATaGGTGAGTTGCATTTCCCAG +
Preference number: 2 (lower is better)
Translates to: PTFPLVKYQRITHSPEAPVSPNT*VSCISQ
Trigger: CTGGGAAATGCAACTCACTCATGTATTTGGAGAAAC...TGGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
3UTR-3UTR TCA 90 bp CCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCATTGCACTAGATAAGTaGACACTCCTGTTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PHVPLGEVSKDHSQPRSPIALDK*TLLFLQ
Trigger: TTGGAGAAACAGGAGTGTTCACTTATCTAGTGCAAT...GGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
3UTR GCA 72 bp GCCTCCTTGAGGGACACGAGGGCGCACTCCGCGCACTaGCGCACGGGGTCCACAAAGCACATGCGCCGCAGC +
Preference number: 3 (lower is better)
Translates to: ASLRDTRAHSAH*RTGSTKHMRRS
Trigger: GCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGTGTCCCTCAAGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR GCA 72 bp ACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACATaGGCCGCAGCGGCACCTTCTGGCTGCAGCACCTGT +
Preference number: 3 (lower is better)
Translates to: TPRTAARGPQST*AAAAPSGCSTC
Trigger: ACAGGTGCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR CCA 72 bp TCGCAGAAGCACTTCCCGCAGCGGCGACAGTGGTGCTaGGCAGATGCGGGAGGATTGGCAGTGAGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: SQKHFPQRRQWC*ADAGGLAVRRG
Trigger: GCCCCTCCTCACTGCCAATCCTCCCGCATCTGCCCAGCACCACTGTCGCCGCTGCGGGAAGTGCTTCTGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
3UTR TCA 72 bp GAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTaGCCACACGTACTCCAAGCTCAGCCCCACGTAGAG +
Preference number: 3 (lower is better)
Translates to: EQALLFQATQSW*PHVLQAQPHVE
Trigger: CTCTACGTGGGGCTGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
3UTR CCA 72 bp AAGTCTGTGAAACAGGCTAAGGCAAGTGCTGTAAACTaGCTATTAGAGGCGAACAGGCTCCACTGCAGACCA +
Preference number: 3 (lower is better)
Translates to: KSVKQAKASAVN*LLEANRLHCRP
Trigger: TGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAGTTTACAGCACTTGCCTTAGCCTGTTTCACAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
3UTR TCA 72 bp CGTGAATGTCTTTTTCTCCAGGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAATGTGTACAATTTCGA +
Preference number: 3 (lower is better)
Translates to: RECLFLQEGSLL*GSARWKCVQFR
Trigger: TCGAAATTGTACACATTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGAAAAAGACATTCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR GCA 90 bp GGCGCACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACATGCGCCGCAGCGGGGTGTTCGGGCACCATaGGCAGGCCGCTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GALRALPHGVHKAHAPQRGVRAP*AGRSGS
Trigger: GCTCCCCGAGCGGCCTGCGCATGGTGCCCGAACACC...CCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp TCCGCCTCCTTGAGGGACACGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCCCCTGTGCCGGCCGCTaGACACGCGCACCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SASLRDTRAHSAHCRTGSPCAGR*TRAPPV
Trigger: GACAGGAGGTGCGCGTGTGCAGCGGCCGGCACAGGG...GGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGTGTCCCTCAAGGAGGCGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR CCA 90 bp TCCGCCTCCTTGAGGGACACGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCCCGCAGCGGCGACAGTaGTGCTGGGCAGATGCGGGA +
Preference number: 4 (lower is better)
Translates to: SASLRDTRAHSAHCRTGSPQRRQ*CWADAG
Trigger: TCCCGCATCTGCCCAGCACCACTGTCGCCGCTGCGG...GGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGTGTCCCTCAAGGAGGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp GGGACACGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACATGCGCGCACTCCGCGCACTaGCGCACGGGGTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: GTRGRTPRTAARGPQSTCAHSAH*RTGSTK
Trigger: CTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGC...GCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR TCA 90 bp ACGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACATGCGCCGCAGAACTCCGCCTCCTTaGGGGACACGAGGGCGCACT +
Preference number: 4 (lower is better)
Translates to: TRAHSAHCRTGSTKHMRRRTPPP*GTRGRT
Trigger: AGTGCGCCCTCGTGTCCCTCAAGGAGGCGGAGTTCT...GCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp GGACACGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACATGCGGCGGCACCTTCTGGCTaGAGCACCTGTCGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GHEGALRALPHGVHKAHAAAPSG*STCRRS
Trigger: GCTTCTGCGACAGGTGCTGCAGCCAGAAGGTGCCGC...CGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp CACTGCCGCACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTGCAGCGGCGACAGTGGTaGTGGGCAGATGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HCRTGSTKHMRRSGTFWLQRRQW*WADAGG
Trigger: TCCTCCCGCATCTGCCCAGCACCACTGTCGCCGCTG...CAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR CCA 90 bp CACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTGCAGCACCTAGCGCACCAGCTTCTTaGCGTCGCGGCGCGCGGACA +
Preference number: 4 (lower is better)
Translates to: HGVHKAHAPQRHLLAAAPSAPAS*RRGART
Trigger: TGTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCT...AGGTGCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp GCCGCACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTGCAGCGGTCCACAAAGCACATaGGCCGCAGCGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: AARGPQSTCAAAAPSGCSGPQST*AAAAPS
Trigger: AGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACC...GCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR CCA 90 bp CACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTGCAGCACCTCGCAGCGGCACCTTCTaGCTGCAGCACCTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: HGVHKAHAPQRHLLAAAPRSGTF*LQHLSQ
Trigger: CTGCGACAGGTGCTGCAGCCAGAAGGTGCCGCTGCG...AGGTGCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR TCA 90 bp CTTGAGGGACACGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCACAAAGCACTGAGTTTCCAAACGTaGCGAGGAAGGTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LEGHEGALRALPHGVHKALSFQT*RGRWLR
Trigger: GCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAG...TGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGTGTCCCTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp AGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAGCCACGCCACCGCCTaGCTCCTGCCCACAGTCACG +
Preference number: 4 (lower is better)
Translates to: RSRLCCSKRLSPGDHTYSSHATA*LLPTVT
Trigger: CGTGACTGTGGGCAGGAGGCAGGCGGTGGCGTGGCT...GGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp TCTGAGTTTCCAAACGTGACGAGGAAGGTGGCTCCGCTCAGGAGCACTTTGAGCAACGCGAGGCCCCTGTaGCGGCCGCTGCACACGCGC +
Preference number: 4 (lower is better)
Translates to: SEFPNVTRKVAPLRSTLSNARPL*RPLHTR
Trigger: GCGCGTGTGCAGCGGCCGGCACAGGGGCCTCGCGTT...GCTCAAAGTGCTCCTGAGCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR CCA 90 bp GGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCACCTTCAGAGGCAGGCTaGCTCCCCCGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSAVPSDSVLVTTRTPSSPSEAG*LPRRLV
Trigger: CACCAGCCTCCGGGGGAGCCAGCCTGCCTCTGAAGG...TGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216602.10
CDS-3UTR GCA 90 bp CAAAGCCCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAGGTGTTCGGGCACCATaGGCAGGCCGCTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QSPHVPLGEVSKDHSQPRGVRAP*AGRSGS
Trigger: GCTCCCCGAGCGGCCTGCGCATGGTGCCCGAACACC...TCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTCCTACAGCGCACCAGCTTCTTaGCGTCGCGGCGCGCGGACA +
Preference number: 4 (lower is better)
Translates to: LAIRGEQAPLQTRSLSSYSAPAS*RRGART
Trigger: TGTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCT...GTAGGAACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGGCGACTCAGTCCTGGTaGCCACACGTACTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: PCGTQGAGSAVPSDSVLVATQSW*PHVLQA
Trigger: AGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGC...CACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp AGCGTGAATGTCTTTTTCTCCAGGAGGGAAGCCTTCTGTGAGGATCTGCACGGTGGTGTTCGGGCACCATaGGCAGGCCGCTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SVNVFFSRREAFCEDLHGGVRAP*AGRSGS
Trigger: GCTCCCCGAGCGGCCTGCGCATGGTGCCCGAACACC...ACCGTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGAAAAAGACATTCACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR GCA 90 bp AGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCGGTCCACAAAGCACATaGGCCGCAGCGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RSRLCCSKRLSPGDHTYSGPQST*AAAAPS
Trigger: AGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACC...GGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp AGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCCACGCCACCGCCTaGCTCCTGCCCACAGTCACG +
Preference number: 4 (lower is better)
Translates to: STSRINPCGTQGAGSAVPSHATA*LLPTVT
Trigger: CGTGACTGTGGGCAGGAGGCAGGCGGTGGCGTGGCT...TGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp CCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAGCCCCACGTAGAAGCTTGGCAGCCTTGTaGATGGCCACTAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: PSDSVLVTTRTPSSAPRRSLAAL*MATSHA
Trigger: GGCGTGGCTAGTGGCCATGCACAAGGCTGCCAAGCT...TCTACGTGGGGCTGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp CTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTCCTACCATGCCTGTGGCCCGTaGGTTGCCTCCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LAIRGEQAPLQTRSLSSYHACGP*VASSRR
Trigger: CCTCCTGGAGGAGGCAACGCACGGGCCACAGGCATG...GTAGGAACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311141.7
CDS-3UTR CCA 90 bp CCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAGCCCCACGTAGAACTGTCAGCTTCAGCTaGGTCACACCCTCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSDSVLVTTRTPSSAPRRTVSFS*VTPSVP
Trigger: GGGGACGGAGGGTGTGACCCAGCTGAAGCTGACAGT...TCTACGTGGGGCTGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp TTTCCCAGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTACACCTCGGAGGACATaGCGCCGCCTCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: FPSTSRINPCGTQGAGSATPRRT*RRLSLS
Trigger: CGAGAGGCTGAGGCGGCGTCATGTCCTCCGAGGTGT...AGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCTGGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTCCTACAGAACTCCGCCTCCTTaGGGGACACGAGGGCGCACT +
Preference number: 4 (lower is better)
Translates to: LAIRGEQAPLQTRSLSSYRTPPP*GTRGRT
Trigger: AGTGCGCCCTCGTGTCCCTCAAGGAGGCGGAGTTCT...GTAGGAACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CTCCTTGAGGGACACGAGGGCGCACTCCGCGCACTGCCGCACGGGGTCCACAAAAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAG +
Preference number: 4 (lower is better)
Translates to: LLEGHEGALRALPHGVHKSFRFL*VSKRDE
Trigger: CTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACT...TTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGCCCTCGTGTCCCTCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp CACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCAAAGCGCACTCCGCGCACTaGCGCACGGGGTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: HVPLGEVSKDHSQPRSPKAHSAH*RTGSTK
Trigger: CTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGC...TTTGGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CAAAGCCCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGACGCAGCGGCACCTTCTaGCTGCAGCACCTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QSPHVPLGEVSKDHSQPRRSGTF*LQHLSQ
Trigger: CTGCGACAGGTGCTGCAGCCAGAAGGTGCCGCTGCG...TCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGGGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp AGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCACGCAGCGGCACCTTCTaGCTGCAGCACCTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: STSRINPCGTQGAGSAVPRSGTF*LQHLSQ
Trigger: CTGCGACAGGTGCTGCAGCCAGAAGGTGCCGCTGCG...TGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCATGGCAGCCTTGTGCATaGCCACTAGCCACGCCACCG +
Preference number: 4 (lower is better)
Translates to: PTFPLVKYQRITHSPEAPWQPCA*PLATPP
Trigger: CGGTGGCGTGGCTAGTGGCCATGCACAAGGCTGCCA...TGGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp TCAGGTTTCTCTGAGTTTCCAAACGTGACGAGGAAGGTGGCTCCGCTCAGGAGCCGGCGACAGTGGTGCTaGGCAGATGCGGGAGGATTG +
Preference number: 4 (lower is better)
Translates to: SGFSEFPNVTRKVAPLRSRRQWC*ADAGGL
Trigger: CAATCCTCCCGCATCTGCCCAGCACCACTGTCGCCG...GCTCCTGAGCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGAGAAACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR GCA 90 bp TTTCCCAGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGCGGCACCTTCTGGCTaGAGCACCTGTCGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: FPSTSRINPCGTQGAGSAAAPSG*STCRRS
Trigger: GCTTCTGCGACAGGTGCTGCAGCCAGAAGGTGCCGC...AGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp AGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAGCGGCACCTTCTGGCTaGAGCACCTGTCGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: STSRINPCGTQGAGSAVPAAPSG*STCRRS
Trigger: GCTTCTGCGACAGGTGCTGCAGCCAGAAGGTGCCGC...TGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCGGCTCCCCCGGAGGCTaGTGTAAGCGTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: PHVPLGEVSKDHSQPRSPGSPGG*CKRECL
Trigger: AAGACATTCACGCTTACACCAGCCTCCGGGGGAGCC...GGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216602.10
CDS-3UTR CCA 90 bp TTTCCCAGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTTGGCAGCCTTGTGCATaGCCACTAGCCACGCCACCG +
Preference number: 4 (lower is better)
Translates to: FPSTSRINPCGTQGAGSAWQPCA*PLATPP
Trigger: CGGTGGCGTGGCTAGTGGCCATGCACAAGGCTGCCA...AGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCTGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTCCTACCTGAGTTTCCAAACGTaGCGAGGAAGGTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LAIRGEQAPLQTRSLSSYLSFQT*RGRWLR
Trigger: GCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAG...GTAGGAACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp GGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GSAVPSDSVLVTTRTPSSEGSLL*GSARWK
Trigger: TTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTC...TGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp CAAAGCCCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAGGTCCACAAAGCACATaGGCCGCAGCGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: QSPHVPLGEVSKDHSQPRGPQST*AAAAPS
Trigger: AGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACC...TCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGGGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp CCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCGCAAGGAGCAGGCTCTaGTGTTCCAAGCGACTCAGT +
Preference number: 4 (lower is better)
Translates to: PHVPLGEVSKDHSQPRSPARSRL*CSKRLS
Trigger: ACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGC...GGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTCCTACCCGCAGCGGCGACAGTaGTGCTTTCTGGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LAIRGEQAPLQTRSLSSYPQRRQ*CFLVRK
Trigger: CTTTCTCACCAGAAAGCACCACTGTCGCCGCTGCGG...GTAGGAACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp GTTGCATTTCCCAGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCCTGAGTTTCCAAACGTaGCGAGGAAGGTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VAFPSTSRINPCGTQGAGLSFQT*RGRWLR
Trigger: GCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAG...GCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCTGGGAAATGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp AGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCTGCAGACCAGAAGCCTaGGTTCCTACTGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: RLCCSKRLSPGDHTYSKLCRPEA*VPTAQT
Trigger: AGTTTGGGCAGTAGGAACTCAGGCTTCTGGTCTGCA...GAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp AGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCCCACGTTCCCCTTGGTaGAGTATCAAAGGATCACTC +
Preference number: 4 (lower is better)
Translates to: RSRLCCSKRLSPGDHTYSPRSPW*SIKGSL
Trigger: GAGTGATCCTTTGATACTTCACCAAGGGGAACGTGG...GGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp AGTGAACACTCCTGTTTCTCCAAATACATGAGTGAGTTGCATTTCCCAGCACAAGGTGTTCGGGCACCATaGGCAGGCCGCTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SEHSCFSKYMSELHFPAQGVRAP*AGRSGS
Trigger: GCTCCCCGAGCGGCCTGCGCATGGTGCCCGAACACC...TTGTGCTGGGAAATGCAACTCACTCATGTATTTGGAGAAACAGGAGTGTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp GTTGCATTTCCCAGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTATACTGCAGGAACATaGCTGTGGCCCGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: VAFPSTSRINPCGTQGAGYTAGT*LWPVRC
Trigger: GCAACGCACGGGCCACAGGCATGTTCCTGCAGTATA...GCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCTGGGAAATGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp ATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCGCAAGGAGCAGGCTCTaGTGTTCCAAGCGACTCAGT +
Preference number: 4 (lower is better)
Translates to: INPCGTQGAGSAVPSDSVARSRL*CSKRLS
Trigger: ACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGC...GACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp AGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCACGCTCAGGAGCACTTTaGGCTGCTTGTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: STSRINPCGTQGAGSAVPRSGAL*AACRRT
Trigger: AGTTCTACGACAAGCAGCTCAAAGTGCTCCTGAGCG...TGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CAAAGCCCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGACGCTCAGGAGCACTTTaGGCTGCTTGTCGTAGAACT +
Preference number: 4 (lower is better)
Translates to: QSPHVPLGEVSKDHSQPRRSGAL*AACRRT
Trigger: AGTTCTACGACAAGCAGCTCAAAGTGCTCCTGAGCG...TCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp AGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAG +
Preference number: 4 (lower is better)
Translates to: RSRLCCSKRLSPGDHTYSSFRFL*VSKRDE
Trigger: CTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACT...GGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAGCCCCACGTAGAAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAG +
Preference number: 4 (lower is better)
Translates to: PSDSVLVTTRTPSSAPRRSFRFL*VSKRDE
Trigger: CTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACT...TCTACGTGGGGCTGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp AGCGTGAATGTCTTTTTCTCCAGGAGGGAAGCCTTCTGTGAGGATCTGCACGGTGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SVNVFFSRREAFCEDLHGEGSLL*GSARWK
Trigger: TTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTC...ACCGTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGAAAAAGACATTCACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR TCA 90 bp GGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAAAGTGGACAAGTCTGTaGAACAGGCTAAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GSAVPSDSVLVTTRTPSSKWTSL*NRLRQV
Trigger: CACTTGCCTTAGCCTGTTTCACAGACTTGTCCACTT...TGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCAAGTGGACAAGTCTGTaGAACAGGCTAAGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PHVPLGEVSKDHSQPRSPKWTSL*NRLRQV
Trigger: CACTTGCCTTAGCCTGTTTCACAGACTTGTCCACTT...GGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp TGTAAACTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTATACTGCAGGAACATaGCTGTGGCCCGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: CKLAIRGEQAPLQTRSLSYTAGT*LWPVRC
Trigger: GCAACGCACGGGCCACAGGCATGTTCCTGCAGTATA...ACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAGTTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp GTAAGCGTGAATGTCTTTTTCTCCAGGAGGGAAGCCTTCTGTGAGGATCTGCACGGCTCCCCCGGAGGCTaGTGTAAGCGTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: VSVNVFFSRREAFCEDLHGSPGG*CKRECL
Trigger: AAGACATTCACGCTTACACCAGCCTCCGGGGGAGCC...GTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGAAAAAGACATTCACGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR CCA 90 bp GAAGCCTTCTGTGAGGATCTGCACGGTGGAAATGTGTACAATTTCGATTTCATACCTTCAGAGGCAGGCTaGCTCCCCCGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EAFCEDLHGGNVYNFDFIPSEAG*LPRRLV
Trigger: CACCAGCCTCCGGGGGAGCCAGCCTGCCTCTGAAGG...TATGAAATCGAAATTGTACACATTTCCACCGTGCAGATCCTCACAGAAGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR CCA 90 bp AGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCGCAAGTGCTGTAAACTaGCTATTAGAGGCGAACAGG +
Preference number: 4 (lower is better)
Translates to: RLCCSKRLSPGDHTYSKLASAVN*LLEANR
Trigger: CCTGTTCGCCTCTAATAGCCAGTTTACAGCACTTGC...GAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGATTGCACTAGATAAGTaGACACTCCTGTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PCGTQGAGSAVPSDSVLVIALDK*TLLFLQ
Trigger: TTGGAGAAACAGGAGTGTTCACTTATCTAGTGCAAT...CACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp CAAAGCCCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAACTTGGCGTCACACTaGATACATCTCCGACACTCC +
Preference number: 4 (lower is better)
Translates to: QSPHVPLGEVSKDHSQPRNLASH*IHLRHS
Trigger: GGAGTGTCGGAGATGTATGCAGTGTGACGCCAAGTT...TCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp CAAAGCCCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCTGAGTTCCTACTaGCCAAACTGGTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QSPHVPLGEVSKDHSQPRSLSSY*PNWFCG
Trigger: TCCACAGAACCAGTTTGGGCAGTAGGAACTCAGGCT...TCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp ATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCATTCATAGAGGAGCTTaGCAGCCTTGTGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: INPCGTQGAGSAVPSDSVIHRGA*QPCAWP
Trigger: TGGCCATGCACAAGGCTGCCAAGCTCCTCTATGAAT...GACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp ATAAGTGAACACTCCTGTTTCTCCAAATACATGAGTGAGTTGCATTTCCCAGCACTGTGGCCCGTGCGTTaGCTCCTCCAGGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ISEHSCFSKYMSELHFPALWPVR*LLQEGS
Trigger: GCTTCCCTCCTGGAGGAGGCAACGCACGGGCCACAG...TGCTGGGAAATGCAACTCACTCATGTATTTGGAGAAACAGGAGTGTTCACTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311141.7
CDS-3UTR GCA 90 bp CGGTATCTTCATTTATGCTTTATAAACCCACTTATCAGATCCAACATCTCTCTTGAGGAACGGGCCCGCTaGATGCGGGGAGCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: RYLHLCFINPLIRSNISLEERAR*MRGAPV
Trigger: CACCGGGGCTCCCCGCATGCAGCGGGCCCGTTCCTC...AAGAGAGATGTTGGATCTGATAAGTGGGTTTATAAAGCATAAATGAAGATACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR TCA 90 bp CTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTCCTACGTTTCTCCAAATACATaGGTGAGTTGCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAIRGEQAPLQTRSLSSYVSPNT*VSCISQ
Trigger: CTGGGAAATGCAACTCACTCATGTATTTGGAGAAAC...GTAGGAACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp AATGTGTACAATTTCGATTTCATAGTGGCTGTCTCCATCCAGAAACAAGTATCTAGCGCACCAGCTTCTTaGCGTCGCGGCGCGCGGACA +
Preference number: 4 (lower is better)
Translates to: NVYNFDFIVAVSIQKQVSSAPAS*RRGART
Trigger: TGTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCT...AGATACTTGTTTCTGGATGGAGACAGCCACTATGAAATCGAAATTGTACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR CCA 90 bp GCGGTATCTTCATTTATGCTTTATAAACCCACTTATCAGATCCAACATCTCTCTCCTTCAGAGGCAGGCTaGCTCCCCCGGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AVSSFMLYKPTYQIQHLSPSEAG*LPRRLV
Trigger: CACCAGCCTCCGGGGGAGCCAGCCTGCCTCTGAAGG...AGAGAGATGTTGGATCTGATAAGTGGGTTTATAAAGCATAAATGAAGATACCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR CCA 90 bp GGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCATCCTACTGCCCAAACTaGTTCTGTGGAAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: GSAVPSDSVLVTTRTPSSSYCPN*FCGRIK
Trigger: TTTAATTCTTCCACAGAACCAGTTTGGGCAGTAGGA...TGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp TGTAAACTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTGCAAGTGCTGTAAACTaGCTATTAGAGGCGAACAGG +
Preference number: 4 (lower is better)
Translates to: CKLAIRGEQAPLQTRSLSASAVN*LLEANR
Trigger: CCTGTTCGCCTCTAATAGCCAGTTTACAGCACTTGC...ACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAGTTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGTGAATTCAGGTGGACAGAAGCCAGGTaGCGAGGGGAGGAACGGGCC +
Preference number: 4 (lower is better)
Translates to: PLIRSNISLKSTKVSEFRWTEAR*RGEERA
Trigger: GGCCCGTTCCTCCCCTCGCCACCTGGCTTCTGTCCA...CCTGAATTCACTTACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR TCA 90 bp GCCTTCTGTGAGGATCTGCACGGTGGAAATGTGTACAATTTCGATTTCATAGTGCTGAGTTTCCAAACGTaGCGAGGAAGGTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AFCEDLHGGNVYNFDFIVLSFQT*RGRWLL
Trigger: GAGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAG...CACTATGAAATCGAAATTGTACACATTTCCACCGTGCAGATCCTCACAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR GCA 90 bp TCCCACCCCCAATTAAGTATTGACAATACACAAATTCTAAAACATGAAGCTGTTGCGCACTCCGCGCACTaGCGCACGGGGTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: SHPQLSIDNTQILKHEAVAHSAH*RTGSTK
Trigger: CTTTGTGGACCCCGTGCGGCAGTGCGCGGAGTGCGC...AACAGCTTCATGTTTTAGAATTTGTGTATTGTCAATACTTAATTGGGGGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR GCA 90 bp TGTTTCTCCAAATACATGAGTGAGTTGCATTTCCCAGCACAAGCAGGATTAATCAGCTTGGCAGCCTTGTaGATGGCCACTAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: CFSKYMSELHFPAQAGLISLAAL*MATSHA
Trigger: GGCGTGGCTAGTGGCCATGCACAAGGCTGCCAAGCT...GATTAATCCTGCTTGTGCTGGGAAATGCAACTCACTCATGTATTTGGAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGTGAATTCAGGGCATGGACCACCCCGTaGACAGAAGCCAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PLIRSNISLKSTKVSEFRAWTTP*TEARWR
Trigger: TCGCCACCTGGCTTCTGTCCACGGGGTGGTCCATGC...CCTGAATTCACTTACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR TCA 90 bp GTAAGCGTGAATGTCTTTTTCTCCAGGAGGGAAGCCTTCTGTGAGGATCTGCACAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAG +
Preference number: 4 (lower is better)
Translates to: VSVNVFFSRREAFCEDLHSFRFL*VSKRDE
Trigger: CTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACT...GTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGAAAAAGACATTCACGCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR TCA 90 bp CAAGTCATAGTTTCAGGTTTCTCTGAGTTTCCAAACGTGACGAGGAAGGTGGCTGCCTCACCTTTCTGGTaGGAAAGTCAAACTTGGCGT +
Preference number: 4 (lower is better)
Translates to: QVIVSGFSEFPNVTRKVAASPFW*ESQTWR
Trigger: ACGCCAAGTTTGACTTTCTCACCAGAAAGGTGAGGC...AGCCACCTTCCTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACTATGACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS-3UTR CCA 90 bp ATAAGTGAACACTCCTGTTTCTCCAAATACATGAGTGAGTTGCATTTCCCAGCACCGCAGCGGCGACAGTaGTGCTTTCTGGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ISEHSCFSKYMSELHFPAPQRRQ*CFLVRK
Trigger: CTTTCTCACCAGAAAGCACCACTGTCGCCGCTGCGG...TGCTGGGAAATGCAACTCACTCATGTATTTGGAGAAACAGGAGTGTTCACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp GGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAAGAAACAAGTATCTCTaGTTATTGGAAAGACGACAA +
Preference number: 4 (lower is better)
Translates to: GSAVPSDSVLVTTRTPSSRNKYL*LLERRQ
Trigger: TTGTCGTCTTTCCAATAACCAGAGATACTTGTTTCT...TGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp ATAAGTGAACACTCCTGTTTCTCCAAATACATGAGTGAGTTGCATTTCCCAGCAGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: ISEHSCFSKYMSELHFPAEGSLL*GSARWK
Trigger: TTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTC...TGCTGGGAAATGCAACTCACTCATGTATTTGGAGAAACAGGAGTGTTCACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCAAAATTGCACTAGATAAGTaGACACTCCTGTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HVPLGEVSKDHSQPRSPKIALDK*TLLFLQ
Trigger: TTGGAGAAACAGGAGTGTTCACTTATCTAGTGCAAT...TTTGGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp AGTGAACACTCCTGTTTCTCCAAATACATGAGTGAGTTGCATTTCCCAGCACAAATTCATAGAGGAGCTTaGCAGCCTTGTGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SEHSCFSKYMSELHFPAQIHRGA*QPCAWP
Trigger: TGGCCATGCACAAGGCTGCCAAGCTCCTCTATGAAT...TTGTGCTGGGAAATGCAACTCACTCATGTATTTGGAGAAACAGGAGTGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp ATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGTGAACTGAGTTTCCAAACGTaGCGAGGAAGGTGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: INPLIRSNISLKSTKVSELSFQT*RGRWLR
Trigger: GCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAG...TTCACTTACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR GCA 90 bp TGTTTCTCCAAATACATGAGTGAGTTGCATTTCCCAGCACAAGCAGGATTAATCAGCCTGAGTTCCTACTaGCCAAACTGGTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CFSKYMSELHFPAQAGLISLSSY*PNWFCG
Trigger: TCCACAGAACCAGTTTGGGCAGTAGGAACTCAGGCT...GATTAATCCTGCTTGTGCTGGGAAATGCAACTCACTCATGTATTTGGAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp AAGTGCTGTAAACTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCAGAAACAAGTATCTCTaGTTATTGGAAAGACGACAA +
Preference number: 4 (lower is better)
Translates to: KCCKLAIRGEQAPLQTRSRNKYL*LLERRQ
Trigger: TTGTCGTCTTTCCAATAACCAGAGATACTTGTTTCT...GCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAGTTTACAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp TGCTTTATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAGGCTCCCCCGGAGGCTaGTGTAAGCGTGAATGTCTT +
Preference number: 4 (lower is better)
Translates to: CFINPLIRSNISLKSTKVGSPGG*CKRECL
Trigger: AAGACATTCACGCTTACACCAGCCTCCGGGGGAGCC...TACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR TCA 90 bp CATTTATGCTTTATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: HLCFINPLIRSNISLKSTEGSLL*GSARWK
Trigger: TTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTC...GGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTATAAAGCATAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR CCA 90 bp CCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGTGAATTCAGGTTTCACAAAGAACCTTaGCATGGACCACCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PLIRSNISLKSTKVSEFRFHKEP*HGPPRG
Trigger: TCCACGGGGTGGTCCATGCCAAGGTTCTTTGTGAAA...CCTGAATTCACTTACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR TCA 90 bp TCCCACCCCCAATTAAGTATTGACAATACACAAATTCTAAAACATGAAGCTGTTTGCAGACCAGAAGCCTaGGTTCCTACTGCCCAAACT +
Preference number: 4 (lower is better)
Translates to: SHPQLSIDNTQILKHEAVCRPEA*VPTAQT
Trigger: AGTTTGGGCAGTAGGAACTCAGGCTTCTGGTCTGCA...AACAGCTTCATGTTTTAGAATTTGTGTATTGTCAATACTTAATTGGGGGTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp CATTTATGCTTTATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCCAAAGAACCTTGGCATaGACCACCCCGTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: HLCFINPLIRSNISLKSTQRTLA*TTPWTE
Trigger: TTCTGTCCACGGGGTGGTCCATGCCAAGGTTCTTTG...GGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTATAAAGCATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR TCA 90 bp ATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGTGAAAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAG +
Preference number: 4 (lower is better)
Translates to: INPLIRSNISLKSTKVSESFRFL*VSKRDE
Trigger: CTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACT...TTCACTTACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR TCA 90 bp TCCCACCCCCAATTAAGTATTGACAATACACAAATTCTAAAACATGAAGCTGTTGTTTCTCCAAATACATaGGTGAGTTGCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SHPQLSIDNTQILKHEAVVSPNT*VSCISQ
Trigger: CTGGGAAATGCAACTCACTCATGTATTTGGAGAAAC...AACAGCTTCATGTTTTAGAATTTGTGTATTGTCAATACTTAATTGGGGGTGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR TCA 90 bp CCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGTGAATTCAGGGTCAACCAAAGTAAGTaGATTCAGGTTTCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PLIRSNISLKSTKVSEFRVNQSK*IQVSQR
Trigger: TCTTTGTGAAACCTGAATTCACTTACTTTGGTTGAC...CCTGAATTCACTTACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR CCA 90 bp GTGTACAATTTCGATTTCATAGTGGCTGTCTCCATCCAGAAACAAGTATCTCTGAGAAACAAGTATCTCTaGTTATTGGAAAGACGACAA +
Preference number: 4 (lower is better)
Translates to: VYNFDFIVAVSIQKQVSLRNKYL*LLERRQ
Trigger: TTGTCGTCTTTCCAATAACCAGAGATACTTGTTTCT...CAGAGATACTTGTTTCTGGATGGAGACAGCCACTATGAAATCGAAATTGTACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR CCA 90 bp TCCCACCCCCAATTAAGTATTGACAATACACAAATTCTAAAACATGAAGCTGTTTCCTACTGCCCAAACTaGTTCTGTGGAAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: SHPQLSIDNTQILKHEAVSYCPN*FCGRIK
Trigger: TTTAATTCTTCCACAGAACCAGTTTGGGCAGTAGGA...AACAGCTTCATGTTTTAGAATTTGTGTATTGTCAATACTTAATTGGGGGTGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CCA 90 bp TGCTTTATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGAAACAAGTATCTCTaGTTATTGGAAAGACGACAA +
Preference number: 4 (lower is better)
Translates to: CFINPLIRSNISLKSTKVRNKYL*LLERRQ
Trigger: TTGTCGTCTTTCCAATAACCAGAGATACTTGTTTCT...TACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTATAAAGCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS GCA 90 bp CCTCCAGGCCGAACGGGCTTCCGAAGGCGCGGTGTTCGGGCACCATaGGCAGGCCGCTCGGGGAGCGCACCAGCTTCTTGGCGTCGCGGC +
Preference number: 5 (lower is better)
Translates to: PPGRTGFRRRGVRAP*AGRSGSAPASWRRG
Trigger: GCCGCGACGCCAAGAAGCTGGTGCGCTCCCCGAGCGGCCTGCGCATGGTGCCCGAACACCGCGCCTTCGGAAGCCCGTTCGGCCTGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000553512.5
ENST00000554255.5
ENST00000554630.5
ENST00000556610.5
CDS CCA 90 bp CCCCGTGCACAGCCCACAGCATCGCCACAGACACGAGGAGCCGGCTaGCGGAGCGCGCGGGACTGTGCAGGACACCCGTCCTTACCGCTC +
Preference number: 5 (lower is better)
Translates to: PRAQPTASPQTRGAG*RSARDCAGHPSLPL
Trigger: GAGCGGTAAGGACGGGTGTCCTGCACAGTCCCGCGCGCTCCGCCAGCCGGCTCCTCGTGTCTGTGGCGATGCTGTGGGCTGTGCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554255.5
CDS TCA 90 bp TGCCACCTCCCCACGCACCCAAGCAGCCTGAGGCAGGCAGGGTTGTaGCGCAGGACGGTGGACTGGCCGCCTGTGCCCAGGCTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: CHLPTHPSSLRQAGL*RRTVDWPPVPRLQS
Trigger: GCTCTGGAGCCTGGGCACAGGCGGCCAGTCCACCGTCCTGCGTCACAACCCTGCCTGCCTCAGGCTGCTTGGGTGCGTGGGGAGGTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 90 bp CACGTCGCTGGGGCACGACCACGGGCTGCTGAGAAAGCTGGGCCCTaGCACCTCCCCACGCACCCAAGCAGCCTGAGGCAGGCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: HVAGARPRAAEKAGP*HLPTHPSSLRQAGL
Trigger: CAACCCTGCCTGCCTCAGGCTGCTTGGGTGCGTGGGGAGGTGGCAGGGCCCAGCTTTCTCAGCAGCCCGTGGTCGTGCCCCAGCGACGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS-3UTR CAA 90 bp CACGGGGTCCACAAAGCACATGCGCCGCAGCGGCACCTTCTGGCTGCAGCACCTGAGCGCACCAGCTTCTaGGCGTCGCGGCGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: HGVHKAHAPQRHLLAAAPERTSF*ASRRAD
Trigger: GTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCTC...AGGTGCTGCAGCCAGAAGGTGCCGCTGCGGCGCATGTGCTTTGTGGACCCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS TCA 90 bp CTGAGAAAGCTGGGCCCTGCCACCTCCCCACGCACCCAAGCAGCCTaGGGCAGGCAGGGTTGTGACGCAGGACGGTGGACTGGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: LRKLGPATSPRTQAA*GRQGCDAGRWTGRL
Trigger: CAGGCGGCCAGTCCACCGTCCTGCGTCACAACCCTGCCTGCCTCAGGCTGCTTGGGTGCGTGGGGAGGTGGCAGGGCCCAGCTTTCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 90 bp CAGCTTGGTCACTCACCACGTCGCTGGGGCACGACCACGGGCTGCTaGGAAAGCTGGGCCCTGCCACCTCCCCACGCACCCAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QLGHSPRRWGTTTGC*ESWALPPPHAPKQP
Trigger: AGGCTGCTTGGGTGCGTGGGGAGGTGGCAGGGCCCAGCTTTCTCAGCAGCCCGTGGTCGTGCCCCAGCGACGTGGTGAGTGACCAAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 90 bp CTCAGGGCCGGCTCTTCTGCCGGTTGGTGGAGTGGGCACCAAGGCTaGAGTCGGAGGCCCACCGACCGTGCTTGGAGGCCTGAGCAACCT +
Preference number: 5 (lower is better)
Translates to: LRAGSSAGWWSGHQG*SRRPTDRAWRPEQP
Trigger: AGGTTGCTCAGGCCTCCAAGCACGGTCGGTGGGCCTCCGACTGCAGCCTTGGTGCCCACTCCACCAACCGGCAGAAGAGCCGGCCCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 90 bp TGGAGTGGGCACCAAGGCTGCAGTCGGAGGCCCACCGACCGTGCTTaGAGGCCTGAGCAACCTATGACACGCTGTCCCCTGGGAGGCCCC +
Preference number: 5 (lower is better)
Translates to: WSGHQGCSRRPTDRA*RPEQPMTRCPLGGP
Trigger: GGGGCCTCCCAGGGGACAGCGTGTCATAGGTTGCTCAGGCCTCCAAGCACGGTCGGTGGGCCTCCGACTGCAGCCTTGGTGCCCACTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 90 bp CTGGAGGAGAGAGACGAGGTAAGACGGCCCAAAGGAGGCCCTGAGTaGCCAGGCGGCCACCAGCCCCAAGGCGGTGGCCAGCACATCCTA +
Preference number: 5 (lower is better)
Translates to: LEERDEVRRPKGGPE*PGGHQPQGGGQHIL
Trigger: TAGGATGTGCTGGCCACCGCCTTGGGGCTGGTGGCCGCCTGGGCACTCAGGGCCTCCTTTGGGCCGTCTTACCTCGTCTCTCTCCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 90 bp GCCCTGGGGAGGGTCTGCCCGGGAGAGCAGTCCGGGAGGCTGTGTTaGCCTGGCCTCCTGAGGCACTGGCCTTCATCTGATGCCCCTAAA +
Preference number: 5 (lower is better)
Translates to: ALGRVCPGEQSGRLC*PGLLRHWPSSDAPK
Trigger: TTTAGGGGCATCAGATGAAGGCCAGTGCCTCAGGAGGCCAGGGCAACACAGCCTCCCGGACTGCTCTCCCGGGCAGACCCTCCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 90 bp CAGACAAGACTGGCTCCTGCAGAGGTGCCCACCTGCACCCAGGGCTaGGGGAAGAGTGGAGGCCACCTCGAGAGTGCCCTGGCCACTGAC +
Preference number: 5 (lower is better)
Translates to: QTRLAPAEVPTCTQG*GKSGGHLESALATD
Trigger: GTCAGTGGCCAGGGCACTCTCGAGGTGGCCTCCACTCTTCCCCCAGCCCTGGGTGCAGGTGGGCACCTCTGCAGGAGCCAGTCTTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 90 bp ACCAAAGGCACGGAACTCCCAAACCTCAGCTGGGAAGGCCTGGCCTaGCCGCCTCCTGCTCACTCCAGATGGCAGGGGGACCCTGACGCC +
Preference number: 5 (lower is better)
Translates to: TKGTELPNLSWEGLA*PPPAHSRWQGDPDA
Trigger: GGCGTCAGGGTCCCCCTGCCATCTGGAGTGAGCAGGAGGCGGCCAGGCCAGGCCTTCCCAGCTGAGGTTTGGGAGTTCCGTGCCTTTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 90 bp GCTGGGTCACACCCTCCGTCCCCGGCACTGTATACTGCAGGAACATaGCTGTGGCCCGTGCGTTGCCTCCTTCAGAGGCAGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGSHPPSPALYTAGT*LWPVRCLLQRQAGS
Trigger: GGAGCCAGCCTGCCTCTGAAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGGAGGGTGTGACCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000555501.1
CDS GCA 90 bp GGCGGCCACCAGCCCCAAGGCGGTGGCCAGCACATCCTAACCTTGTaGTGCTCCAAGAGTAGCCTGGCAGTGAGGGCTGGTGCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: GGHQPQGGGQHILTL*CSKSSLAVRAGAQE
Trigger: CTCCTGAGCACCAGCCCTCACTGCCAGGCTACTCTTGGAGCAGCACAAGGTTAGGATGTGCTGGCCACCGCCTTGGGGCTGGTGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 90 bp AGTGTTGGCAGAGGCTCCCAAGGGCAGGTGAGCCCCCACGCCCCCTaGCCTCAGCCTGTTCAGGGCTGGCAGGTACTGACAGAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SVGRGSQGQVSPHAP*PQPVQGWQVLTESC
Trigger: ACAGCTCTCTGTCAGTACCTGCCAGCCCTGAACAGGCTGAGGCCAGGGGGCGTGGGGGCTCACCTGCCCTTGGGAGCCTCTGCCAACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS-3UTR CAA 90 bp GCTGGCTCCCCCGGAGGCTGGTGTAAGCGTGAATGTCTTTTTCTCCAGGAGGGAGAGCGCACCAGCTTCTaGGCGTCGCGGCGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: AGSPGGWCKRECLFLQEGERTSF*ASRRAD
Trigger: GTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCTC...TCCCTCCTGGAGAAAAAGACATTCACGCTTACACCAGCCTCCGGGGGAGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS GCA 90 bp TGGCAGCCTTGTGCATGGCCACTAGCCACGCCACCGCCTGCCTCCTaGCCACAGTCACGTCCTCCACCACTGTCAGCTTCAGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: WQPCAWPLATPPPAS*PQSRPPPLSASAGS
Trigger: TGACCCAGCTGAAGCTGACAGTGGTGGAGGACGTGACTGTGGGCAGGAGGCAGGCGGTGGCGTGGCTAGTGGCCATGCACAAGGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000554757.1
ENST00000555501.1
CDS GCA 90 bp GCTGGGTCACACCCTCCGTCCCCGGCACTGTATACTGCAGGAACATaGCTGTGGCCCGTGCGTTGCCTCCTCCAGGAGGGAAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: AGSHPPSPALYTAGT*LWPVRCLLQEGSLL
Trigger: CAGAAGGCTTCCCTCCTGGAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGGAGGGTGTGACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311141.7
CDS CCA 90 bp CCAGGGAAGGCTGTGCTAGCACCCACTTCACAAACGAGGCGAGCATaGGGAGGTGCTGATTCTGGGGCTGCGCGCCAGCCGGCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: PGKAVLAPTSQTRRA*GGADSGAARQPAKA
Trigger: GGCTTTTGCCGGCTGGCGCGCAGCCCCAGAATCAGCACCTCCCCATGCTCGCCTCGTTTGTGAAGTGGGTGCTAGCACAGCCTTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 90 bp ACCCAAGTCCCACTGCTTAGGACGCCCTCGCGCCTCGGGGCGCCATaGGCTGGGCACACATTAGGGGCAAGACACTTCACGAGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TQVPLLRTPSRLGAP*AGHTLGARHFTRAK
Trigger: CTTTGCCCTCGTGAAGTGTCTTGCCCCTAATGTGTGCCCAGCTCATGGCGCCCCGAGGCGCGAGGGCGTCCTAAGCAGTGGGACTTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 90 bp AAGCTCACAGGTGGGGTGGGAGAGGGACCAAGACACTCAGCCGGGTaGCCCAGGGCCCGGGACAAACAACAAGAGCCACATCACCACGAG +
Preference number: 5 (lower is better)
Translates to: KLTGGVGEGPRHSAG*PRARDKQQEPHHHE
Trigger: CTCGTGGTGATGTGGCTCTTGTTGTTTGTCCCGGGCCCTGGGGCACCCGGCTGAGTGTCTTGGTCCCTCTCCCACCCCACCTGTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 90 bp GCTGGGTCACACCCTCCGTCCCCGGCACTGTATACTGCAGGAACATaGCTGTGGCCCGTGCGTTGCCTCCTGGAGGAGAGAGACGAGGTA +
Preference number: 5 (lower is better)
Translates to: AGSHPPSPALYTAGT*LWPVRCLLEERDEV
Trigger: TACCTCGTCTCTCTCCTCCAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGGAGGGTGTGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 90 bp CCACCACAGAGCCTGCTTCTGAGGGGCGTGGGTCCCAGCTGTGCCTaGCGCCTCCACTTAGAACAGCAAGCCGGATGCGTTGACCACTTG +
Preference number: 5 (lower is better)
Translates to: PPQSLLLRGVGPSCA*RLHLEQQAGCVDHL
Trigger: CAAGTGGTCAACGCATCCGGCTTGCTGTTCTAAGTGGAGGCGGCAGGCACAGCTGGGACCCACGCCCCTCAGAAGCAGGCTCTGTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 90 bp CAGCTGGCCTCACCCAGGAGTCAGAGGCCTCAGCCATCCCACCGTTaGGAAGCGGCGTCAGCACAGAGGGGATTGTCACTACAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: QLASPRSQRPQPSHR*EAASAQRGLSLQRP
Trigger: GGGCCTTTGTAGTGACAATCCCCTCTGTGCTGACGCCGCTTCTCAACGGTGGGATGGCTGAGGCCTCTGACTCCTGGGTGAGGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 90 bp TCTGCCCGGGAGAGCAGTCCGGGAGGCTGTGTTGCCCTGGCCTCCTaGGGCACTGGCCTTCATCTGATGCCCCTAAACACTGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: SARESSPGGCVALAS*GTGLHLMPLNTGLH
Trigger: ATGAAGGCCAGTGTTTAGGGGCATCAGATGAAGGCCAGTGCCTCAGGAGGCCAGGGCAACACAGCCTCCCGGACTGCTCTCCCGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS GCA 90 bp CGGCTAATTGAGGCGCTGCTATGCCCTGGGGCCTGTGGGGGTTCCTaGCTTCAGAGAACCTCCAGACAAGACTGGCTCCTGCAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RLIEALLCPGACGGS*LQRTSRQDWLLQRC
Trigger: GCACCTCTGCAGGAGCCAGTCTTGTCTGGAGGTTCTCTGAAGGCAGGAACCCCCACAGGCCCCAGGGCATAGCAGCGCCTCAATTAGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 90 bp AGGGCCCGGGACAAACAACAAGAGCCACATCACCACGAGAGGCCTTaGTCTCGGCTAATTGAGGCGCTGCTATGCCCTGGGGCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RARDKQQEPHHHERP*SRLIEALLCPGACG
Trigger: CCCACAGGCCCCAGGGCATAGCAGCGCCTCAATTAGCCGAGAGCAAGGCCTCTCGTGGTGATGTGGCTCTTGTTGTTTGTCCCGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 90 bp TCACACCCTCCGTCCCCGGCACTGTATACTGCAGGAACATGCCTGTaGCCCGTGCGTTGCCTCCTGGAGGAGAGAGACGAGGTAAGACGG +
Preference number: 5 (lower is better)
Translates to: SHPPSPALYTAGTCL*PVRCLLEERDEVRR
Trigger: CCGTCTTACCTCGTCTCTCTCCTCCAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGGAGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS-3UTR CAA 90 bp CCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCCCTGTGGCCCGTGCGTaGCCTCCTCCAGGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: PHVPLGEVSKDHSQPRSPPVARA*PPPGGK
Trigger: CTTCCCTCCTGGAGGAGGCAACGCACGGGCCACAGG...GGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311141.7
CDS TCA 90 bp CACCCCGCTTTGGTCCTCGCTGTCAGAGACCTCGGTGGCGGGTGGTaGACCAGAAACAGGTGTGGGTTCAATGAACCAGCGACGGAACGG +
Preference number: 5 (lower is better)
Translates to: HPALVLAVRDLGGGW*TRNRCGFNEPATER
Trigger: CCGTTCCGTCGCTGGTTCATTGAACCCACACCTGTTTCTGGTTCACCACCCGCCACCGAGGTCTCTGACAGCGAGGACCAAAGCGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 90 bp CATCACCACGAGAGGCCTTGCTCTCGGCTAATTGAGGCGCTGCTATaGCCTGGGGCCTGTGGGGGTTCCTGCCTTCAGAGAACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HHHERPCSRLIEALL*PGACGGSCLQRTSR
Trigger: TCTGGAGGTTCTCTGAAGGCAGGAACCCCCACAGGCCCCAGGGCATAGCAGCGCCTCAATTAGCCGAGAGCAAGGCCTCTCGTGGTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 90 bp AAGCACCACTGGATCATAGCCATGGCCGTCTGTCACCCTGTCTTCTaGAGCCGCCTCCGCCTTCACCACAGCACACGTGGCTGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: KHHWIIAMAVCHPVF*SRLRLHHSTRGWQR
Trigger: CCTTTGCCAGCCACGTGTGCTGTGGTGAAGGCGGAGGCGGCTGCAGAAGACAGGGTGACAGACGGCCATGGCTATGATCCAGTGGTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 90 bp TGCCTCCTGCCCACAGTCACGTCCTCCACCACTGTCAGCTTCAGCTaGGTCACACCCTCCGTCCCCGGCACTGTATACTGCAGGAACATG +
Preference number: 5 (lower is better)
Translates to: CLLPTVTSSTTVSFS*VTPSVPGTVYCRNM
Trigger: CATGTTCCTGCAGTATACAGTGCCGGGGACGGAGGGTGTGACCCAGCTGAAGCTGACAGTGGTGGAGGACGTGACTGTGGGCAGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000554757.1
ENST00000555501.1
CDS CCA 90 bp GGAGAGCAGTCCGGGAGGCTGTGTTGCCCTGGCCTCCTGAGGCACTaGCCTTCATCTGATGCCCCTAAACACTGGCCTTCATCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: GEQSGRLCCPGLLRH*PSSDAPKHWPSSEP
Trigger: AGGCTCAGATGAAGGCCAGTGTTTAGGGGCATCAGATGAAGGCCAGTGCCTCAGGAGGCCAGGGCAACACAGCCTCCCGGACTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 90 bp GTGGCTGGCAAAGGTTTACTATCTGGCCTTGAAAGAATGAGTGTGTaGCCTGCCCTACAGGGCCCAGGCTGGCAGGCGGCCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: VAGKGLLSGLERMSV*PALQGPGWQAAPWL
Trigger: CAGCCAAGGGGCCGCCTGCCAGCCTGGGCCCTGTAGGGCAGGCCACACACTCATTCTTTCAAGGCCAGATAGTAAACCTTTGCCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS-3UTR CAA 90 bp TGTAAACTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTGAGCGCACCAGCTTCTaGGCGTCGCGGCGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: CKLAIRGEQAPLQTRSLSERTSF*ASRRAD
Trigger: GTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCTC...ACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAGTTTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CAA 90 bp CCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGAGGAGCTTGGCAGCCTaGTGCATGGCCACTAGCCAC +
Preference number: 5 (lower is better)
Translates to: PCGTQGAGSAVPSDSVLVRSLAA*CMATSH
Trigger: GTGGCTAGTGGCCATGCACAAGGCTGCCAAGCTCCT...CACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS TCA 90 bp GTTGGGGACTGGTCTCTGGGACCCAGGCTCCCCGTCTTTGGGCGGTaGCCAGCTGTTCCAGTGACAATGACTCAATTCCAGCACTCGCTC +
Preference number: 5 (lower is better)
Translates to: VGDWSLGPRLPVFGR*PAVPVTMTQFQHSL
Trigger: GAGCGAGTGCTGGAATTGAGTCATTGTCACTGGAACAGCTGGTCACCGCCCAAAGACGGGGAGCCTGGGTCCCAGAGACCAGTCCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 90 bp ACAACAAGAGCCACATCACCACGAGAGGCCTTGCTCTCGGCTAATTaGGGCGCTGCTATGCCCTGGGGCCTGTGGGGGTTCCTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: TTRATSPREALLSAN*GAAMPWGLWGFLPS
Trigger: TGAAGGCAGGAACCCCCACAGGCCCCAGGGCATAGCAGCGCCTCAATTAGCCGAGAGCAAGGCCTCTCGTGGTGATGTGGCTCTTGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 90 bp ATTGGGGGCTGCGGGACCCAGGACGCCTCGCCTCCCTCAGCTTCATaGGAACAAGACCCTCGTGCTCTGGGGTCCTTGGTAAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: IGGCGTQDASPPSAS*EQDPRALGSLVRMK
Trigger: TTTCATCCTTACCAAGGACCCCAGAGCACGAGGGTCTTGTTCTCATGAAGCTGAGGGAGGCGAGGCGTCCTGGGTCCCGCAGCCCCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 90 bp GACAGAAACAGGAAGGTGACTGGGCTCAGGGCCCACCAGGAATTCTaGCAGCACAAGACCTGGGAACTGGGCAGGTGGCCATGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: DRNRKVTGLRAHQEF*QHKTWELGRWPWGS
Trigger: TGAGCCCCATGGCCACCTGCCCAGTTCCCAGGTCTTGTGCTGTCAGAATTCCTGGTGGGCCCTGAGCCCAGTCACCTTCCTGTTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 90 bp CAGGATGGGCCAAAGCTCACCAGGAAATGCACCAGGGGTTTAGTCTaGACAGACGCCTGCAGGAGGAGGGCTGAAGTGCTGGCTCCCGAT +
Preference number: 5 (lower is better)
Translates to: QDGPKLTRKCTRGLV*TDACRRRAEVLAPD
Trigger: ATCGGGAGCCAGCACTTCAGCCCTCCTCCTGCAGGCGTCTGTGCAGACTAAACCCCTGGTGCATTTCCTGGTGAGCTTTGGCCCATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS GCA 90 bp CCCGCTTCTCCAGACCCTACCCTTTGCACCTGGGCATCTATACCTTaGAGCCTGCTCAAGGCAACCAGCTTGATGCCATCCCGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PASPDPTLCTWASIP*SLLKATSLMPSRLH
Trigger: GTGGAGCCGGGATGGCATCAAGCTGGTTGCCTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGGAGAAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 90 bp TGCCATCCCGGCTCCACACACATCCCTGAGCTCAGGACAGAACACTaGCCTGGGCATCTCACCTCACCATCCAGGAGGCTGACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: CHPGSTHIPELRTEH*PGHLTSPSRRLTEV
Trigger: CACTTCTGTCAGCCTCCTGGATGGTGAGGTGAGATGCCCAGGCCAGTGTTCTGTCCTGAGCTCAGGGATGTGTGTGGAGCCGGGATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 90 bp GTGCCTGGGGTGACCCCCGCTTCTCCAGACCCTACCCTTTGCACCTaGGCATCTATACCTTGCAGCCTGCTCAAGGCAACCAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: VPGVTPASPDPTLCT*ASIPCSLLKATSLM
Trigger: CATCAAGCTGGTTGCCTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGGAGAAGCGGGGGTCACCCCAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 90 bp AGACCTCGGTGGCGGGTGGTGAACCAGAAACAGGTGTGGGTTCAATaGACCAGCGACGGAACGGTGGGAGTCAAAGGGGTCCTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: RPRWRVVNQKQVWVQ*TSDGTVGVKGVLLG
Trigger: TCCCAAGAGGACCCCTTTGACTCCCACCGTTCCGTCGCTGGTTCATTGAACCCACACCTGTTTCTGGTTCACCACCCGCCACCGAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 90 bp CTCAAGGCAACCAGCTTGATGCCATCCCGGCTCCACACACATCCCTaGGCTCAGGACAGAACACTGGCCTGGGCATCTCACCTCACCATC +
Preference number: 5 (lower is better)
Translates to: LKATSLMPSRLHTHP*AQDRTLAWASHLTI
Trigger: GATGGTGAGGTGAGATGCCCAGGCCAGTGTTCTGTCCTGAGCTCAGGGATGTGTGTGGAGCCGGGATGGCATCAAGCTGGTTGCCTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS GCA 90 bp AGCAGACCCCACTCCTCAGGGCAGCTGCCTGATCCCAAAAGTGCATaGTCCTCTTGTCACCCACGCATGGCACCAAACCCTCCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SRPHSSGQLPDPKSA*SSCHPRMAPNPPGL
Trigger: TAAGCCAGGAGGGTTTGGTGCCATGCGTGGGTGACAAGAGGAGCATGCACTTTTGGGATCAGGCAGCTGCCCTGAGGAGTGGGGTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000556795.1
CDS GCA 90 bp AAGCTCACCAGGAAATGCACCAGGGGTTTAGTCTGCACAGACGCCTaGAGGAGGAGGGCTGAAGTGCTGGCTCCCGATGAGCCACCATTC +
Preference number: 5 (lower is better)
Translates to: KLTRKCTRGLVCTDA*RRRAEVLAPDEPPF
Trigger: GAATGGTGGCTCATCGGGAGCCAGCACTTCAGCCCTCCTCCTGCAGGCGTCTGTGCAGACTAAACCCCTGGTGCATTTCCTGGTGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS CCA 90 bp CACCCATGTTGGGGACTGGTCTCTGGGACCCAGGCTCCCCGTCTTTaGGCGGTGACCAGCTGTTCCAGTGACAATGACTCAATTCCAGCA +
Preference number: 5 (lower is better)
Translates to: HPCWGLVSGTQAPRL*AVTSCSSDNDSIPA
Trigger: TGCTGGAATTGAGTCATTGTCACTGGAACAGCTGGTCACCGCCCAAAGACGGGGAGCCTGGGTCCCAGAGACCAGTCCCCAACATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 90 bp GAGGTGGGCTTGGGGTTTGACTGTCTCGCAGCAGAGCATGCATCCTaGCACTTCAGGTCCCTCCACACTGGACCCAACAGCAGTTCACCT +
Preference number: 5 (lower is better)
Translates to: EVGLGFDCLAAEHAS*HFRSLHTGPNSSSP
Trigger: AGGTGAACTGCTGTTGGGTCCAGTGTGGAGGGACCTGAAGTGCCAGGATGCATGCTCTGCTGCGAGACAGTCAAACCCCAAGCCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 90 bp GAGGAAGAGGCTGACCTTCAGAGGCAGGCTGGCTCCCCCGGAGGCTaGTGTAAGCGTGAATGTCTTTTTCTCCAGGAGGGAAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: EEEADLQRQAGSPGG*CKRECLFLQEGSLL
Trigger: CAGAAGGCTTCCCTCCTGGAGAAAAAGACATTCACGCTTACACCAGCCTCCGGGGGAGCCAGCCTGCCTCTGAAGGTCAGCCTCTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS-3UTR CAA 90 bp TTTCCCAGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTCATCTCCGACACTCCTaGTCCGGGACCCACTGCGGC +
Preference number: 5 (lower is better)
Translates to: FPSTSRINPCGTQGAGSAHLRHS*SGTHCG
Trigger: GCCGCAGTGGGTCCCGGACAAGGAGTGTCGGAGATG...AGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCTGGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CAA 90 bp TGTAAACTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTCCTGTGGCCCGTGCGTaGCCTCCTTCAGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CKLAIRGEQAPLQTRSLSPVARA*PPSEAG
Trigger: GCCTGCCTCTGAAGGAGGCAACGCACGGGCCACAGG...ACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAGTTTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216602.10
CDS-3UTR CAA 90 bp CCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGGCCCCCACGTTCCCCTaGGTGAAGTATCAAAGGATC +
Preference number: 5 (lower is better)
Translates to: PCGTQGAGSAVPSDSVLVAPTFP*VKYQRI
Trigger: GATCCTTTGATACTTCACCAAGGGGAACGTGGGGGC...CACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS TCA 90 bp GTACGCAAGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTaGCCACACGTACTCCAAGCTCAGCCCCACGTAGAGTTACTGGTC +
Preference number: 5 (lower is better)
Translates to: VRKEQALLFQATQSW*PHVLQAQPHVELLV
Trigger: GACCAGTAACTCTACGTGGGGCTGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCTTGCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000554757.1
ENST00000555501.1
CDS TCA 90 bp GCACCTGGGCATCTATACCTTGCAGCCTGCTCAAGGCAACCAGCTTaGTGCCATCCCGGCTCCACACACATCCCTGAGCTCAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: APGHLYLAACSRQPA*CHPGSTHIPELRTE
Trigger: TTCTGTCCTGAGCTCAGGGATGTGTGTGGAGCCGGGATGGCATCAAGCTGGTTGCCTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 90 bp GCTGGCTCCCCCGGAGGCTGGTGTAAGCGTGAATGTCTTTTTCTATaGCAAGAAGGTGGGCAGGCAGTGGCGAGAAGGAGCAACCAAGAG +
Preference number: 5 (lower is better)
Translates to: AGSPGGWCKRECLFL*QEGGQAVARRSNQE
Trigger: CTCTTGGTTGCTCCTTCTCGCCACTGCCTGCCCACCTTCTTGCCATAGAAAAAGACATTCACGCTTACACCAGCCTCCGGGGGAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS CCA 90 bp ACCATGGCTCTGCCTACCGCCTGCATTTGCCTGATAAAGCACCACTaGATCATAGCCATGGCCGTCTGTCACCCTGTCTTCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TMALPTACICLIKHH*IIAMAVCHPVFCSR
Trigger: GCGGCTGCAGAAGACAGGGTGACAGACGGCCATGGCTATGATCCAGTGGTGCTTTATCAGGCAAATGCAGGCGGTAGGCAGAGCCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 90 bp AAGAAGGTGGGCAGGCAGTGGCGAGAAGGAGCAACCAAGAGCCGGTaGGAGAACGGAAGGAAAGCAACATGGGTTACGGCACACGCATCT +
Preference number: 5 (lower is better)
Translates to: KKVGRQWREGATKSR*ENGRKATWVTAHAS
Trigger: AGATGCGTGTGCCGTAACCCATGTTGCTTTCCTTCCGTTCTCTCACCGGCTCTTGGTTGCTCCTTCTCGCCACTGCCTGCCCACCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS TCA 90 bp CTTCACCACAGCACACGTGGCTGGCAAAGGTTTACTATCTGGCCTTaGAAGAATGAGTGTGTGGCCTGCCCTACAGGGCCCAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LHHSTRGWQRFTIWP*KNECVACPTGPRLA
Trigger: TGCCAGCCTGGGCCCTGTAGGGCAGGCCACACACTCATTCTTTCAAGGCCAGATAGTAAACCTTTGCCAGCCACGTGTGCTGTGGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS GCA 90 bp CCAGGACGCCTCGCCTCCCTCAGCTTCATGAGAACAAGACCCTCGTaGTCTGGGGTCCTTGGTAAGGATGAAACAAGGTGTGACAAGCAC +
Preference number: 5 (lower is better)
Translates to: PGRLASLSFMRTRPS*SGVLGKDETRCDKH
Trigger: GTGCTTGTCACACCTTGTTTCATCCTTACCAAGGACCCCAGAGCACGAGGGTCTTGTTCTCATGAAGCTGAGGGAGGCGAGGCGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 90 bp GTCCTTGGTAAGGATGAAACAAGGTGTGACAAGCACACCCCGCTTTaGTCCTCGCTGTCAGAGACCTCGGTGGCGGGTGGTGAACCAGAA +
Preference number: 5 (lower is better)
Translates to: VLGKDETRCDKHTPL*SSLSETSVAGGEPE
Trigger: TTCTGGTTCACCACCCGCCACCGAGGTCTCTGACAGCGAGGACCAAAGCGGGGTGTGCTTGTCACACCTTGTTTCATCCTTACCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 90 bp GCGTCCGGCAGAATCAGCACAGTCACTTTCCACGGAAACAGGGCATaGCTGACACTCAAAATGAGCCATAACGGCTGGGTGTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: ASGRISTVTFHGNRA*LTLKMSHNGWVWWL
Trigger: GAGCCACCACACCCAGCCGTTATGGCTCATTTTGAGTGTCAGCCATGCCCTGTTTCCGTGGAAAGTGACTGTGCTGATTCTGCCGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 90 bp AAGTGCATGCTCCTCTTGTCACCCACGCATGGCACCAAACCCTCCTaGCTTAGGAAAGGACGTGCTGGCATTTACCTCCAGGAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: KCMLLLSPTHGTKPS*LRKGRAGIYLQEGS
Trigger: GCTTCCCTCCTGGAGGTAAATGCCAGCACGTCCTTTCCTAAGCCAGGAGGGTTTGGTGCCATGCGTGGGTGACAAGAGGAGCATGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000556795.1
CDS-3UTR CAA 90 bp AGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAAGGAGCTTGGCAGCCTaGTGCATGGCCACTAGCCAC +
Preference number: 5 (lower is better)
Translates to: STSRINPCGTQGAGSAVPRSLAA*CMATSH
Trigger: GTGGCTAGTGGCCATGCACAAGGCTGCCAAGCTCCT...TGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS CCA 90 bp GAAGAGAGCAGCTCTTCAGTCAGGGCTGGTGTTGAAAGAGACCCATaGGATGCAGCCTCCCATGAACTTGATGACTTGGGAGGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: EESSSSVRAGVERDP*DAASHELDDLGGKP
Trigger: GGGCTTCCCTCCCAAGTCATCAAGTTCATGGGAGGCTGCATCCCATGGGTCTCTTTCAACACCAGCCCTGACTGAAGAGCTGCTCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 90 bp GGCCTGAAGCCCCATGGCAAGGTGGTACTGTCCCGGCACCTCAGATaGTTGGTCGGCCTAAGGGTAAAGGTGGAATTGAAATCAGTTAGA +
Preference number: 5 (lower is better)
Translates to: GLKPHGKVVLSRHLR*LVGLRVKVELKSVR
Trigger: TCTAACTGATTTCAATTCCACCTTTACCCTTAGGCCGACCAAGCATCTGAGGTGCCGGGACAGTACCACCTTGCCATGGGGCTTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS-3UTR CAA 90 bp AGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTGTTCCAGCCCCCACGTTCCCCTaGGTGAAGTATCAAAGGATC +
Preference number: 5 (lower is better)
Translates to: STSRINPCGTQGAGSAVPAPTFP*VKYQRI
Trigger: GATCCTTTGATACTTCACCAAGGGGAACGTGGGGGC...TGGAACAGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CAA 90 bp TGTGAGGATCTGCACGGTGGAAATGTGTACAATTTCGATTTCATAGTGGCTGTCGAAGGTGGCTCCTCCTaGTCCGGGACCCACTGCGGC +
Preference number: 5 (lower is better)
Translates to: CEDLHGGNVYNFDFIVAVEGGSS*SGTHCG
Trigger: GCCGCAGTGGGTCCCGGACAAGGAGGAGCCACCTTC...GACAGCCACTATGAAATCGAAATTGTACACATTTCCACCGTGCAGATCCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS CCA 90 bp TTCAATGAACCAGCGACGGAACGGTGGGAGTCAAAGGGGTCCTCTTaGGAGAGATGGAGGGTCTTTTGGCTTCTGATGATTAAGGGCTCG +
Preference number: 5 (lower is better)
Translates to: FNEPATERWESKGSS*ERWRVFWLLMIKGS
Trigger: CGAGCCCTTAATCATCAGAAGCCAAAAGACCCTCCATCTCTCCCAAGAGGACCCCTTTGACTCCCACCGTTCCGTCGCTGGTTCATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS-3UTR CAA 90 bp CCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAGCCCCACGTAGAGTGAGAAAGTCAAACTaGGCGTCACACTGCATACAT +
Preference number: 5 (lower is better)
Translates to: PSDSVLVTTRTPSSAPRRVRKSN*ASHCIH
Trigger: ATGTATGCAGTGTGACGCCAAGTTTGACTTTCTCAC...TCTACGTGGGGCTGAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CAA 90 bp GGCTCCGCTCAGGAGCACTTTGAGCTGCTTGTCGTAGAACTCCGCCTCCTTGAGGTGAGAAAGTCAAACTaGGCGTCACACTGCATACAT +
Preference number: 5 (lower is better)
Translates to: GSAQEHFELLVVELRLLEVRKSN*ASHCIH
Trigger: ATGTATGCAGTGTGACGCCAAGTTTGACTTTCTCAC...CTCAAGGAGGCGGAGTTCTACGACAAGCAGCTCAAAGTGCTCCTGAGCGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553512.5
CDS CCA 90 bp CTTAAGTCAACCAAAGTAAGTGAATTCAGGTTTCACAAAGAACCTTaGCATGGACCACCCCGTGGACAGAAGCCAGGTGGCGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LKSTKVSEFRFHKEP*HGPPRGQKPGGEGR
Trigger: CCTCCCCTCGCCACCTGGCTTCTGTCCACGGGGTGGTCCATGCCAAGGTTCTTTGTGAAACCTGAATTCACTTACTTTGGTTGACTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553724.1
ENST00000555163.2
ENST00000602552.1
CDS-3UTR CAA 90 bp AGGAGCAGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAATACATGAGTGAGTaGCATTTCCCAGCACAAGCA +
Preference number: 5 (lower is better)
Translates to: RSRLCCSKRLSPGDHTYSKYMSE*HFPAQA
Trigger: TGCTTGTGCTGGGAAATGCAACTCACTCATGTATTT...GGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCTGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS CCA 90 bp TATGCACACAGAATGTACAAAGGTAGACAGAAACAGGAAGGTGACTaGGCTCAGGGCCCACCAGGAATTCTGACAGCACAAGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: YAHRMYKGRQKQEGD*AQGPPGILTAQDLG
Trigger: TCCCAGGTCTTGTGCTGTCAGAATTCCTGGTGGGCCCTGAGCCCAGTCACCTTCCTGTTTCTGTCTACCTTTGTACATTCTGTGTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS-3UTR CAA 90 bp TCCCACCCCCAATTAAGTATTGACAATACACAAATTCTAAAACATGAAGCTGTTGAGCGCACCAGCTTCTaGGCGTCGCGGCGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: SHPQLSIDNTQILKHEAVERTSF*ASRRAD
Trigger: GTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCTC...AACAGCTTCATGTTTTAGAATTTGTGTATTGTCAATACTTAATTGGGGGTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CAA 90 bp CTGGCTATTAGAGGCGAACAGGCTCCACTGCAGACCAGAAGCCTGAGTTCCTACGTGAGAAAGTCAAACTaGGCGTCACACTGCATACAT +
Preference number: 5 (lower is better)
Translates to: LAIRGEQAPLQTRSLSSYVRKSN*ASHCIH
Trigger: ATGTATGCAGTGTGACGCCAAGTTTGACTTTCTCAC...GTAGGAACTCAGGCTTCTGGTCTGCAGTGGAGCCTGTTCGCCTCTAATAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS-3UTR CAA 90 bp CCCCACGTTCCCCTTGGTGAAGTATCAAAGGATCACTCACAGCCCAGAAGCCCCAAATACATGAGTGAGTaGCATTTCCCAGCACAAGCA +
Preference number: 5 (lower is better)
Translates to: PHVPLGEVSKDHSQPRSPKYMSE*HFPAQA
Trigger: TGCTTGTGCTGGGAAATGCAACTCACTCATGTATTT...GGGGCTTCTGGGCTGTGAGTGATCCTTTGATACTTCACCAAGGGGAACGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS CCA 90 bp TCAGGTTTCTCTGAGTTTCCAAACGTGACGAGGAAGGTGGCTCCTTaGGAACACAAAAGCAAACGTGAGAACAGGGCCTGCTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SGFSEFPNVTRKVAP*EHKSKRENRACFFS
Trigger: GGAAAAGAAGCAGGCCCTGTTCTCACGTTTGCTTTTGTGTTCCCAAGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGAGAAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556795.1
CDS TCA 90 bp TCTCTGGTTATTGGAAAGACGACAAGTCATAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAGGAAGGTGGCTCCGCTCAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SLVIGKTTSHSFRFL*VSKRDEEGGSAQEH
Trigger: GTGCTCCTGAGCGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACTATGACTTGTCGTCTTTCCAATAACCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000554630.5
ENST00000555163.2
ENST00000555501.1
CDS TCA 90 bp TCTCTGGTTATTGGAAAGACGACAAGTCATAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAGGAAGGTGGCTCCTCCTTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: SLVIGKTTSHSFRFL*VSKRDEEGGSSLSG
Trigger: CCCGGACAAGGAGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACTATGACTTGTCGTCTTTCCAATAACCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS CCA 90 bp AGGCACAGAGAAGCTGTAAGACTCACAAGCCAGGGCTCACAAGGCTaGACTTTGTTGGCCAAGAGTGTTCTATGCACACAGAATGTACAA +
Preference number: 5 (lower is better)
Translates to: RHREAVRLTSQGSQG*TLLAKSVLCTQNVQ
Trigger: TTGTACATTCTGTGTGCATAGAACACTCTTGGCCAACAAAGTCCAGCCTTGTGAGCCCTGGCTTGTGAGTCTTACAGCTTCTCTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 90 bp AGGGCTGAAGTGCTGGCTCCCGATGAGCCACCATTCAGACCTTTTTaGGGATCTCAGTTATTGCATTTGGGGCTTTATCCTTGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RAEVLAPDEPPFRPF*GSQLLHLGLYPWFE
Trigger: TTCAAACCAAGGATAAAGCCCCAAATGCAATAACTGAGATCCCCAAAAAGGTCTGAATGGTGGCTCATCGGGAGCCAGCACTTCAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS-3UTR CAA 90 bp AGGCTCTGCTGTTCCAAGCGACTCAGTCCTGGTGACCACACGTACTCCAAGCTCAAGTATCTCTGGTTATaGGAAAGACGACAAGTCATA +
Preference number: 5 (lower is better)
Translates to: RLCCSKRLSPGDHTYSKLKYLWL*ERRQVI
Trigger: TATGACTTGTCGTCTTTCCAATAACCAGAGATACTT...GAGCTTGGAGTACGTGTGGTCACCAGGACTGAGTCGCTTGGAACAGCAGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS TCA 90 bp AGGAAAGGACGTGCTGGCATTTACCTCCAGGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAATGTGTACAATTTCGATTTCATAGT +
Preference number: 5 (lower is better)
Translates to: RKGRAGIYLQEGSLL*GSARWKCVQFRFHS
Trigger: ACTATGAAATCGAAATTGTACACATTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGGTAAATGCCAGCACGTCCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553724.1
ENST00000554630.5
ENST00000556795.1
CDS CCA 90 bp GGCAAATGTCCCTTTGTTGTCTTACAGTTTAAGTCTCCACTCACCTaGCGAGTTCTAAAGCCACTGAGTAAATACACGCCCCGCGAAAGA +
Preference number: 5 (lower is better)
Translates to: GKCPFVVLQFKSPLT*RVLKPLSKYTPRER
Trigger: TCTTTCGCGGGGCGTGTATTTACTCAGTGGCTTTAGAACTCGCCAGGTGAGTGGAGACTTAAACTGTAAGACAACAAAGGGACATTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS-3UTR CAA 90 bp TTTCCCAGCACAAGCAGGATTAATCCCTGTGGTACGCAAGGAGCAGGCTCTGCTAAGTATCTCTGGTTATaGGAAAGACGACAAGTCATA +
Preference number: 5 (lower is better)
Translates to: FPSTSRINPCGTQGAGSAKYLWL*ERRQVI
Trigger: TATGACTTGTCGTCTTTCCAATAACCAGAGATACTT...AGCAGAGCCTGCTCCTTGCGTACCACAGGGATTAATCCTGCTTGTGCTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000311141.7
CDS TCA 90 bp TCTCTGGTTATTGGAAAGACGACAAGTCATAGTTTCAGGTTTCTCTaGGTTTCCAAACGTGACGAGGAAGGTGGCTCCTTGGGAACACAA +
Preference number: 5 (lower is better)
Translates to: SLVIGKTTSHSFRFL*VSKRDEEGGSLGTQ
Trigger: TTGTGTTCCCAAGGAGCCACCTTCCTCGTCACGTTTGGAAACTCAGAGAAACCTGAAACTATGACTTGTCGTCTTTCCAATAACCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556795.1
CDS TCA 90 bp CAGAGAGCTGTCAATTGCTGGGTAACCCTCCCGCTGAGACAGAACTaGGAAAGTACATCTGCTGCGGTATCTTCATTTATGCTTTATAAA +
Preference number: 5 (lower is better)
Translates to: QRAVNCWVTLPLRQN*ESTSAAVSSFMLYK
Trigger: TTTATAAAGCATAAATGAAGATACCGCAGCAGATGTACTTTCTCAGTTCTGTCTCAGCGGGAGGGTTACCCAGCAATTGACAGCTCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS-3UTR CAA 90 bp TGCTTTATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAGTTTCACAAAGAACCTaGGCATGGACCACCCCGTGG +
Preference number: 5 (lower is better)
Translates to: CFINPLIRSNISLKSTKVVSQRT*AWTTPW
Trigger: CCACGGGGTGGTCCATGCCAAGGTTCTTTGTGAAAC...TACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTATAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS TCA 90 bp TGGAGGGTCTTTTGGCTTCTGATGATTAAGGGCTCGGCTGAATATTaGCCAAGAATCATCCATGTTCTAAGCACAATAATCCTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: WRVFWLLMIKGSAEY*PRIIHVLSTIILKR
Trigger: TCTTTTGAGGATTATTGTGCTTAGAACATGGATGATTCTTGGTCAATATTCAGCCGAGCCCTTAATCATCAGAAGCCAAAAGACCCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 90 bp ATGAGCCACCATTCAGACCTTTTTGGGGATCTCAGTTATTGCATTTaGGGCTTTATCCTTGGTTTGAATCCAACAATAAACCGAATGATA +
Preference number: 5 (lower is better)
Translates to: MSHHSDLFGDLSYCI*GFILGLNPTINRMI
Trigger: TATCATTCGGTTTATTGTTGGATTCAAACCAAGGATAAAGCCCCAAATGCAATAACTGAGATCCCCAAAAAGGTCTGAATGGTGGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 90 bp AAACCGAATGATACGTTAGAGCATTTAGAGCAGAGGAAATCATTATaGCATGCTGAGGCAAATGTCCCTTTGTTGTCTTACAGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: KPNDTLEHLEQRKSL*HAEANVPLLSYSLS
Trigger: ACTTAAACTGTAAGACAACAAAGGGACATTTGCCTCAGCATGTCATAATGATTTCCTCTGCTCTAAATGCTCTAACGTATCATTCGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS-3UTR CAA 90 bp AATGTGTACAATTTCGATTTCATAGTGGCTGTCTCCATCCAGAAACAAGTATCTAAGTATCTCTGGTTATaGGAAAGACGACAAGTCATA +
Preference number: 5 (lower is better)
Translates to: NVYNFDFIVAVSIQKQVSKYLWL*ERRQVI
Trigger: TATGACTTGTCGTCTTTCCAATAACCAGAGATACTT...AGATACTTGTTTCTGGATGGAGACAGCCACTATGAAATCGAAATTGTACACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556610.5
CDS-3UTR CAA 90 bp ATAAACCCACTTATCAGATCCAACATCTCTCTTAAGTCAACCAAAGTAAGTGAAAAGTATCTCTGGTTATaGGAAAGACGACAAGTCATA +
Preference number: 5 (lower is better)
Translates to: INPLIRSNISLKSTKVSEKYLWL*ERRQVI
Trigger: TATGACTTGTCGTCTTTCCAATAACCAGAGATACTT...TTCACTTACTTTGGTTGACTTAAGAGAGATGTTGGATCTGATAAGTGGGTTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555163.2
CDS GCA 72 bp GCACTCCCCGGGCCACGCCTAAACGCGAGGCCCCTGTaGCGGCCGCTGCACACGCGCACCTCCTGTCGCCAG +
Preference number: 6 (lower is better)
Translates to: ALPGPRLNARPL*RPLHTRTSCRQ
Trigger: CTGGCGACAGGAGGTGCGCGTGTGCAGCGGCCGGCACAGGGGCCTCGCGTTTAGGCGTGGCCCGGGGAGTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553512.5
ENST00000553724.1
ENST00000555501.1
CDS TCA 72 bp GCCGCCTCCTGCTCACTCCAGATGGCAGGGGGACCCTaGCGCCGGCACGAGCGCAGCACGAGGACGCCGCCA +
Preference number: 6 (lower is better)
Translates to: AASCSLQMAGGP*RRHERSTRTPP
Trigger: TGGCGGCGTCCTCGTGCTGCGCTCGTGCCGGCGTCAGGGTCCCCCTGCCATCTGGAGTGAGCAGGAGGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 90 bp TGTTCGGGCACCATGCGCAGGCCGCTCGGGGAGCGCACCAGCTTCTaGGCGTCGCGGCGCGCGGACACCTCGGAGGACATGACGCCGCCT +
Preference number: 6 (lower is better)
Translates to: CSGTMRRPLGERTSF*ASRRADTSEDMTPP
Trigger: AGGCGGCGTCATGTCCTCCGAGGTGTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCTCCCCGAGCGGCCTGCGCATGGTGCCCGAACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000553512.5
ENST00000554255.5
ENST00000554630.5
CDS TCA 72 bp GTGCCACGGGGGCGGGCGCCAGGCCTGGGGACGCCCTaGAGATGCTTCCTCAGCTGGAGGACCCAGGCACAG +
Preference number: 6 (lower is better)
Translates to: VPRGRAPGLGTP*RCFLSWRTQAQ
Trigger: CTGTGCCTGGGTCCTCCAGCTGAGGAAGCATCTTCAGGGCGTCCCCAGGCCTGGCGCCCGCCCCCGTGGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp CAGGCCGGTGTGTGCCACGGGGGCGGGCGCCAGGCCTaGGGACGCCCTGAAGATGCTTCCTCAGCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: QAGVCHGGGRQA*GRPEDASSAGG
Trigger: TCCTCCAGCTGAGGAAGCATCTTCAGGGCGTCCCCAGGCCTGGCGCCCGCCCCCGTGGCACACACCGGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 72 bp ACCATGCGCAGGCCGCTCGGGGAGCGCACCAGCTTCTaGGCGTCGCGGCGCGCGGACACCTCGGAGGACATG +
Preference number: 6 (lower is better)
Translates to: TMRRPLGERTSF*ASRRADTSEDM
Trigger: CATGTCCTCCGAGGTGTCCGCGCGCCGCGACGCCAAGAAGCTGGTGCGCTCCCCGAGCGGCCTGCGCATGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000553512.5
ENST00000554255.5
ENST00000554630.5
ENST00000556610.5
CDS TCA 72 bp CACTCACCACGTCGCTGGGGCACGACCACGGGCTGCTaGGAAAGCTGGGCCCTGCCACCTCCCCACGCACCC +
Preference number: 6 (lower is better)
Translates to: HSPRRWGTTTGC*ESWALPPPHAP
Trigger: GGGTGCGTGGGGAGGTGGCAGGGCCCAGCTTTCTCAGCAGCCCGTGGTCGTGCCCCAGCGACGTGGTGAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp CGAACGGGCTTCCGAAGGCGCGGTGTTCGGGCACCATaGGCAGGCCGCTCGGGGAGCGCACCAGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: RTGFRRRGVRAP*AGRSGSAPASW
Trigger: CCAAGAAGCTGGTGCGCTCCCCGAGCGGCCTGCGCATGGTGCCCGAACACCGCGCCTTCGGAAGCCCGTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216602.10
ENST00000311141.7
ENST00000553512.5
ENST00000554255.5
ENST00000554630.5
ENST00000556610.5
CDS TCA 72 bp CTGGGCCCTGCCACCTCCCCACGCACCCAAGCAGCCTaGGGCAGGCAGGGTTGTGACGCAGGACGGTGGACT +
Preference number: 6 (lower is better)
Translates to: LGPATSPRTQAA*GRQGCDAGRWT
Trigger: AGTCCACCGTCCTGCGTCACAACCCTGCCTGCCTCAGGCTGCTTGGGTGCGTGGGGAGGTGGCAGGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp CAGGGTTGTGACGCAGGACGGTGGACTGGCCGCCTGTaGCCAGGCTCCAGAGCCAATGCGGTGGGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: QGCDAGRWTGRL*PGSRANAVGCR
Trigger: CCTGCACCCCACCGCATTGGCTCTGGAGCCTGGGCACAGGCGGCCAGTCCACCGTCCTGCGTCACAACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp AGCACTCAGGGCCGGCTCTTCTGCCGGTTGGTGGAGTaGGCACCAAGGCTGCAGTCGGAGGCCCACCGACCG +
Preference number: 6 (lower is better)
Translates to: STQGRLFCRLVE*APRLQSEAHRP
Trigger: CGGTCGGTGGGCCTCCGACTGCAGCCTTGGTGCCCACTCCACCAACCGGCAGAAGAGCCGGCCCTGAGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 72 bp CCCCCATCAGCACTCAGGGCCGGCTCTTCTGCCGGTTaGTGGAGTGGGCACCAAGGCTGCAGTCGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PPSALRAGSSAG*WSGHQGCSRRP
Trigger: GGGCCTCCGACTGCAGCCTTGGTGCCCACTCCACCAACCGGCAGAAGAGCCGGCCCTGAGTGCTGATGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 72 bp GGCTCTTCTGCCGGTTGGTGGAGTGGGCACCAAGGCTaGAGTCGGAGGCCCACCGACCGTGCTTGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GSSAGWWSGHQG*SRRPTDRAWRP
Trigger: AGGCCTCCAAGCACGGTCGGTGGGCCTCCGACTGCAGCCTTGGTGCCCACTCCACCAACCGGCAGAAGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 72 bp CCATCAGCACTCAGGGCCGGCTCTTCTGCCGGTTGGTaGAGTGGGCACCAAGGCTGCAGTCGGAGGCCCACC +
Preference number: 6 (lower is better)
Translates to: PSALRAGSSAGW*SGHQGCSRRPT
Trigger: GGTGGGCCTCCGACTGCAGCCTTGGTGCCCACTCCACCAACCGGCAGAAGAGCCGGCCCTGAGTGCTGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 72 bp AGAGGCTCCCAAGGGCAGGTGAGCCCCCACGCCCCCTaGCCTCAGCCTGTTCAGGGCTGGCAGGTACTGACA +
Preference number: 6 (lower is better)
Translates to: RGSQGQVSPHAP*PQPVQGWQVLT
Trigger: TGTCAGTACCTGCCAGCCCTGAACAGGCTGAGGCCAGGGGGCGTGGGGGCTCACCTGCCCTTGGGAGCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp GGTCACGGGCCATCTCCCCAGACCCAGCACCCATGTTaGGGACTGGTCTCTGGGACCCAGGCTCCCCGTCTT +
Preference number: 6 (lower is better)
Translates to: GHGPSPQTQHPC*GLVSGTQAPRL
Trigger: AAGACGGGGAGCCTGGGTCCCAGAGACCAGTCCCCAACATGGGTGCTGGGTCTGGGGAGATGGCCCGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CAA 90 bp CCAGGCGGCCACCAGCCCCAAGGCGGTGGCCAGCACATCCTAACCTaGTGCTGCTCCAAGAGTAGCCTGGCAGTGAGGGCTGGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: PGGHQPQGGGQHILT*CCSKSSLAVRAGAQ
Trigger: CTGAGCACCAGCCCTCACTGCCAGGCTACTCTTGGAGCAGCACAAGGTTAGGATGTGCTGGCCACCGCCTTGGGGCTGGTGGCCGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 72 bp CCACTGCTTAGGACGCCCTCGCGCCTCGGGGCGCCATaGGCTGGGCACACATTAGGGGCAAGACACTTCACG +
Preference number: 6 (lower is better)
Translates to: PLLRTPSRLGAP*AGHTLGARHFT
Trigger: CGTGAAGTGTCTTGCCCCTAATGTGTGCCCAGCTCATGGCGCCCCGAGGCGCGAGGGCGTCCTAAGCAGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp CACCCTCCGTCCCCGGCACTGTATACTGCAGGAACATaGCTGTGGCCCGTGCGTTGCCTCCTCCAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: HPPSPALYTAGT*LWPVRCLLQEG
Trigger: TCCCTCCTGGAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGGAGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311141.7
CDS GCA 72 bp GGTGGGGTGGGAGAGGGACCAAGACACTCAGCCGGGTaGCCCAGGGCCCGGGACAAACAACAAGAGCCACAT +
Preference number: 6 (lower is better)
Translates to: GGVGEGPRHSAG*PRARDKQQEPH
Trigger: ATGTGGCTCTTGTTGTTTGTCCCGGGCCCTGGGGCACCCGGCTGAGTGTCTTGGTCCCTCTCCCACCCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 72 bp CCGTCCCCGGCACTGTATACTGCAGGAACATGCCTGTaGCCCGTGCGTTGCCTCCTTCAGAGGCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: PSPALYTAGTCL*PVRCLLQRQAG
Trigger: GCCAGCCTGCCTCTGAAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000555501.1
CDS CCA 72 bp CACCAAGGCTGCAGTCGGAGGCCCACCGACCGTGCTTaGAGGCCTGAGCAACCTATGACACGCTGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: HQGCSRRPTDRA*RPEQPMTRCPL
Trigger: CAGGGGACAGCGTGTCATAGGTTGCTCAGGCCTCCAAGCACGGTCGGTGGGCCTCCGACTGCAGCCTTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 72 bp GCTGTGCTAGCACCCACTTCACAAACGAGGCGAGCATaGGGAGGTGCTGATTCTGGGGCTGCGCGCCAGCCG +
Preference number: 6 (lower is better)
Translates to: AVLAPTSQTRRA*GGADSGAARQP
Trigger: CGGCTGGCGCGCAGCCCCAGAATCAGCACCTCCCCATGCTCGCCTCGTTTGTGAAGTGGGTGCTAGCACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp CACCCTCCGTCCCCGGCACTGTATACTGCAGGAACATaGCTGTGGCCCGTGCGTTGCCTCCTTCAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: HPPSPALYTAGT*LWPVRCLLQRQ
Trigger: CTGCCTCTGAAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGGAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216602.10
ENST00000555501.1
CDS GCA 72 bp GAGGGCGAGAGAACGTCAGAGAAGCAGAACGCCCCGTaGACAGCCCACAGCATCGCCACAGACACGAGGAGC +
Preference number: 6 (lower is better)
Translates to: EGERTSEKQNAP*TAHSIATDTRS
Trigger: GCTCCTCGTGTCTGTGGCGATGCTGTGGGCTGTGCACGGGGCGTTCTGCTTCTCTGACGTTCTCTCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554255.5
CDS GCA 72 bp AGCCTGCTTCTGAGGGGCGTGGGTCCCAGCTGTGCCTaGCGCCTCCACTTAGAACAGCAAGCCGGATGCGTT +
Preference number: 6 (lower is better)
Translates to: SLLLRGVGPSCA*RLHLEQQAGCV
Trigger: AACGCATCCGGCTTGCTGTTCTAAGTGGAGGCGGCAGGCACAGCTGGGACCCACGCCCCTCAGAAGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp TCTCAGCAGCCCCAAATGGAGCGTGGCCTGGTGAGGTaGCTGCTCCGACCACCACAGAGCCTGCTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: SQQPQMERGLVR*LLRPPQSLLLR
Trigger: CCTCAGAAGCAGGCTCTGTGGTGGTCGGAGCAGGCACCTCACCAGGCCACGCTCCATTTGGGGCTGCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp CCGTCCCCGGCACTGTATACTGCAGGAACATGCCTGTaGCCCGTGCGTTGCCTCCTGGAGGAGAGAGACGAG +
Preference number: 6 (lower is better)
Translates to: PSPALYTAGTCL*PVRCLLEERDE
Trigger: CTCGTCTCTCTCCTCCAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CAA 90 bp GTCCCCGGCACTGTATACTGCAGGAACATGCCTGTGGCCCGTGCGTaGCCTCCTGGAGGAGAGAGACGAGGTAAGACGGCCCAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: VPGTVYCRNMPVARA*PPGGERRGKTAQRR
Trigger: CCTCCTTTGGGCCGTCTTACCTCGTCTCTCTCCTCCAGGAGGCAACGCACGGGCCACAGGCATGTTCCTGCAGTATACAGTGCCGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CAA 90 bp CCTGCGGGAGATGCACCCAGCGTAACCATGGGGCCTGAGGTGGGCTaGGGGTTTGACTGTCTCGCAGCAGAGCATGCATCCTGGCACTTC +
Preference number: 6 (lower is better)
Translates to: PAGDAPSVTMGPEVG*GFDCLAAEHASWHF
Trigger: GAAGTGCCAGGATGCATGCTCTGCTGCGAGACAGTCAAACCCCAAGCCCACCTCAGGCCCCATGGTTACGCTGGGTGCATCTCCCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp TGCGGGACCCAGGACGCCTCGCCTCCCTCAGCTTCATaGGAACAAGACCCTCGTGCTCTGGGGTCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: CGTQDASPPSAS*EQDPRALGSLV
Trigger: TACCAAGGACCCCAGAGCACGAGGGTCTTGTTCTCATGAAGCTGAGGGAGGCGAGGCGTCCTGGGTCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp CCCCAAGGCGGTGGCCAGCACATCCTAACCTTGTGCTaGTCCAAGAGTAGCCTGGCAGTGAGGGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: PQGGGQHILTLC*SKSSLAVRAGA
Trigger: AGCACCAGCCCTCACTGCCAGGCTACTCTTGGAGCAGCACAAGGTTAGGATGTGCTGGCCACCGCCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 72 bp CAGCCCCAAGGCGGTGGCCAGCACATCCTAACCTTGTaGTGCTCCAAGAGTAGCCTGGCAGTGAGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: QPQGGGQHILTL*CSKSSLAVRAG
Trigger: ACCAGCCCTCACTGCCAGGCTACTCTTGGAGCAGCACAAGGTTAGGATGTGCTGGCCACCGCCTTGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 72 bp TGGATCATAGCCATGGCCGTCTGTCACCCTGTCTTCTaGAGCCGCCTCCGCCTTCACCACAGCACACGTGGC +
Preference number: 6 (lower is better)
Translates to: WIIAMAVCHPVF*SRLRLHHSTRG
Trigger: GCCACGTGTGCTGTGGTGAAGGCGGAGGCGGCTGCAGAAGACAGGGTGACAGACGGCCATGGCTATGATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp CACAAGCCCAAGGTCACACCCCACTGTGGGCAGCCATaGCCACCCGGCCAACTCCTTAGAAAAACCAGCCGG +
Preference number: 6 (lower is better)
Translates to: HKPKVTPHCGQP*PPGQLLRKTSR
Trigger: CCGGCTGGTTTTTCTAAGGAGTTGGCCGGGTGGCCATGGCTGCCCACAGTGGGGTGTGACCTTGGGCTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp CAGGTTTCACAAAGAACCTTGGCATGGACCACCCCGTaGACAGAAGCCAGGTGGCGAGGGGAGGAACGGGCC +
Preference number: 6 (lower is better)
Translates to: QVSQRTLAWTTP*TEARWRGEERA
Trigger: GGCCCGTTCCTCCCCTCGCCACCTGGCTTCTGTCCACGGGGTGGTCCATGCCAAGGTTCTTTGTGAAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553724.1
ENST00000555163.2
ENST00000602552.1
CDS CCA 72 bp TCCTATTGTCCCCACCCCCACCGGAAGACAGGGTGCTaGGGTCTGAAGGGCTCTACTGAGACTGGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: SYCPHPHRKTGC*GLKGSTETGQS
Trigger: GCTCTGCCCAGTCTCAGTAGAGCCCTTCAGACCCCAGCACCCTGTCTTCCGGTGGGGGTGGGGACAATAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CAA 90 bp ACAGCTGGCCTCACCCAGGAGTCAGAGGCCTCAGCCATCCCACCGTaGAGAAGCGGCGTCAGCACAGAGGGGATTGTCACTACAAAGGCC +
Preference number: 6 (lower is better)
Translates to: TAGLTQESEASAIPP*RSGVSTEGIVTTKA
Trigger: GGCCTTTGTAGTGACAATCCCCTCTGTGCTGACGCCGCTTCTCAACGGTGGGATGGCTGAGGCCTCTGACTCCTGGGTGAGGCCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 72 bp AGGAAGGTGACTGGGCTCAGGGCCCACCAGGAATTCTaGCAGCACAAGACCTGGGAACTGGGCAGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: RKVTGLRAHQEF*QHKTWELGRWP
Trigger: TGGCCACCTGCCCAGTTCCCAGGTCTTGTGCTGTCAGAATTCCTGGTGGGCCCTGAGCCCAGTCACCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp GAGAGCAGTCCGGGAGGCTGTGTTGCCCTGGCCTCCTaGGGCACTGGCCTTCATCTGATGCCCCTAAACACT +
Preference number: 6 (lower is better)
Translates to: ESSPGGCVALAS*GTGLHLMPLNT
Trigger: AGTGTTTAGGGGCATCAGATGAAGGCCAGTGCCTCAGGAGGCCAGGGCAACACAGCCTCCCGGACTGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS GCA 72 bp CCTGGGGTGACCCCCGCTTCTCCAGACCCTACCCTTTaGACCTGGGCATCTATACCTTGCAGCCTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: PGVTPASPDPTL*TWASIPCSLLK
Trigger: CTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGGAGAAGCGGGGGTCACCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp TGGGGACTGGTCTCTGGGACCCAGGCTCCCCGTCTTTaGGCGGTGACCAGCTGTTCCAGTGACAATGACTCA +
Preference number: 6 (lower is better)
Translates to: WGLVSGTQAPRL*AVTSCSSDNDS
Trigger: TGAGTCATTGTCACTGGAACAGCTGGTCACCGCCCAAAGACGGGGAGCCTGGGTCCCAGAGACCAGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CAA 72 bp GATGCACCCAGCGTAACCATGGGGCCTGAGGTGGGCTaGGGGTTTGACTGTCTCGCAGCAGAGCATGCATCC +
Preference number: 6 (lower is better)
Translates to: DAPSVTMGPEVG*GFDCLAAEHAS
Trigger: GGATGCATGCTCTGCTGCGAGACAGTCAAACCCCAAGCCCACCTCAGGCCCCATGGTTACGCTGGGTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 72 bp GCCTGGGGTGACCCCCGCTTCTCCAGACCCTACCCTTaGCACCTGGGCATCTATACCTTGCAGCCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: AWGDPRFSRPYP*HLGIYTLQPAQ
Trigger: TTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGGAGAAGCGGGGGTCACCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CAA 90 bp CCCCGCTTCTCCAGACCCTACCCTTTGCACCTGGGCATCTATACCTaGCAGCCTGCTCAAGGCAACCAGCTTGATGCCATCCCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: PRFSRPYPLHLGIYT*QPAQGNQLDAIPAP
Trigger: TGGAGCCGGGATGGCATCAAGCTGGTTGCCTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGGAGAAGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 72 bp TCACCCAGGAGTCAGAGGCCTCAGCCATCCCACCGTTaGGAAGCGGCGTCAGCACAGAGGGGATTGTCACTA +
Preference number: 6 (lower is better)
Translates to: SPRSQRPQPSHR*EAASAQRGLSL
Trigger: TAGTGACAATCCCCTCTGTGCTGACGCCGCTTCTCAACGGTGGGATGGCTGAGGCCTCTGACTCCTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 72 bp TGTGCCTGCCGCCTCCACTTAGAACAGCAAGCCGGATaGGTTGACCACTTGCAGGGGGTTCCTAGCTCGAAC +
Preference number: 6 (lower is better)
Translates to: CACRLHLEQQAG*VDHLQGVPSSN
Trigger: GTTCGAGCTAGGAACCCCCTGCAAGTGGTCAACGCATCCGGCTTGCTGTTCTAAGTGGAGGCGGCAGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp AGGAAATGCACCAGGGGTTTAGTCTGCACAGACGCCTaGAGGAGGAGGGCTGAAGTGCTGGCTCCCGATGAG +
Preference number: 6 (lower is better)
Translates to: RKCTRGLVCTDA*RRRAEVLAPDE
Trigger: CTCATCGGGAGCCAGCACTTCAGCCCTCCTCCTGCAGGCGTCTGTGCAGACTAAACCCCTGGTGCATTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS GCA 72 bp CAACACTGGGGAACCTTGCCTGTCAGTGTAACGTCCTaGCTAGGCTCTAGAGCAGGGCGACCATGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: QHWGTLPVSVTS*LGSRAGRPWLC
Trigger: GCAGAGCCATGGTCGCCCTGCTCTAGAGCCTAGGCAGGACGTTACACTGACAGGCAAGGTTCCCCAGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp ACACCCCGCTTTGGTCCTCGCTGTCAGAGACCTCGGTaGCGGGTGGTGAACCAGAAACAGGTGTGGGTTCAA +
Preference number: 6 (lower is better)
Translates to: TPRFGPRCQRPR*RVVNQKQVWVQ
Trigger: TTGAACCCACACCTGTTTCTGGTTCACCACCCGCCACCGAGGTCTCTGACAGCGAGGACCAAAGCGGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp TCTGCACAGACGCCTGCAGGAGGAGGGCTGAAGTGCTaGCTCCCGATGAGCCACCATTCAGACCTTTTTGGG +
Preference number: 6 (lower is better)
Translates to: SAQTPAGGGLKC*LPMSHHSDLFG
Trigger: CCCAAAAAGGTCTGAATGGTGGCTCATCGGGAGCCAGCACTTCAGCCCTCCTCCTGCAGGCGTCTGTGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS CCA 72 bp GTGACCCCCGCTTCTCCAGACCCTACCCTTTGCACCTaGGCATCTATACCTTGCAGCCTGCTCAAGGCAACC +
Preference number: 6 (lower is better)
Translates to: VTPASPDPTLCT*ASIPCSLLKAT
Trigger: GGTTGCCTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGGAGAAGCGGGGGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 72 bp TGGTCTCTGGGACCCAGGCTCCCCGTCTTTGGGCGGTaGCCAGCTGTTCCAGTGACAATGACTCAATTCCAG +
Preference number: 6 (lower is better)
Translates to: WSLGPRLPVFGR*PAVPVTMTQFQ
Trigger: CTGGAATTGAGTCATTGTCACTGGAACAGCTGGTCACCGCCCAAAGACGGGGAGCCTGGGTCCCAGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 72 bp TGGCGGGTGGTGAACCAGAAACAGGTGTGGGTTCAATaGACCAGCGACGGAACGGTGGGAGTCAAAGGGGTC +
Preference number: 6 (lower is better)
Translates to: WRVVNQKQVWVQ*TSDGTVGVKGV
Trigger: GACCCCTTTGACTCCCACCGTTCCGTCGCTGGTTCATTGAACCCACACCTGTTTCTGGTTCACCACCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp TTGGTCCTCGCTGTCAGAGACCTCGGTGGCGGGTGGTaGACCAGAAACAGGTGTGGGTTCAATGAACCAGCG +
Preference number: 6 (lower is better)
Translates to: LVLAVRDLGGGW*TRNRCGFNEPA
Trigger: CGCTGGTTCATTGAACCCACACCTGTTTCTGGTTCACCACCCGCCACCGAGGTCTCTGACAGCGAGGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp CTCGAACCTCCTCATGACCAAGGGACGAAGTCACCGTaGACACGCTCACCCTCAGCACCAAAGGCACGGAAC +
Preference number: 6 (lower is better)
Translates to: LEPPHDQGTKSP*TRSPSAPKARN
Trigger: GTTCCGTGCCTTTGGTGCTGAGGGTGAGCGTGTTCACGGTGACTTCGTCCCTTGGTCATGAGGAGGTTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp GGCAGGCAGTGGCGAGAAGGAGCAACCAAGAGCCGGTaGGAGAACGGAAGGAAAGCAACATGGGTTACGGCA +
Preference number: 6 (lower is better)
Translates to: GRQWREGATKSR*ENGRKATWVTA
Trigger: TGCCGTAACCCATGTTGCTTTCCTTCCGTTCTCTCACCGGCTCTTGGTTGCTCCTTCTCGCCACTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS GCA 72 bp CACTCCTCAGGGCAGCTGCCTGATCCCAAAAGTGCATaGTCCTCTTGTCACCCACGCATGGCACCAAACCCT +
Preference number: 6 (lower is better)
Translates to: HSSGQLPDPKSA*SSCHPRMAPNP
Trigger: AGGGTTTGGTGCCATGCGTGGGTGACAAGAGGAGCATGCACTTTTGGGATCAGGCAGCTGCCCTGAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000556795.1
CDS GCA 72 bp CCAAAGCTCACCAGGAAATGCACCAGGGGTTTAGTCTaGACAGACGCCTGCAGGAGGAGGGCTGAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: PKLTRKCTRGLV*TDACRRRAEVL
Trigger: CAGCACTTCAGCCCTCCTCCTGCAGGCGTCTGTGCAGACTAAACCCCTGGTGCATTTCCTGGTGAGCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS GCA 72 bp AGCAGGGCGACCATGGCTCTGCCTACCGCCTGCATTTaGCTGATAAAGCACCACTGGATCATAGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: SRATMALPTACI*LIKHHWIIAMA
Trigger: GGCCATGGCTATGATCCAGTGGTGCTTTATCAGGCAAATGCAGGCGGTAGGCAGAGCCATGGTCGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp AAGGATGAAACAAGGTGTGACAAGCACACCCCGCTTTaGTCCTCGCTGTCAGAGACCTCGGTGGCGGGTGGT +
Preference number: 6 (lower is better)
Translates to: KDETRCDKHTPL*SSLSETSVAGG
Trigger: ACCACCCGCCACCGAGGTCTCTGACAGCGAGGACCAAAGCGGGGTGTGCTTGTCACACCTTGTTTCATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp TTGGGGTTTGACTGTCTCGCAGCAGAGCATGCATCCTaGCACTTCAGGTCCCTCCACACTGGACCCAACAGC +
Preference number: 6 (lower is better)
Translates to: LGFDCLAAEHAS*HFRSLHTGPNS
Trigger: GCTGTTGGGTCCAGTGTGGAGGGACCTGAAGTGCCAGGATGCATGCTCTGCTGCGAGACAGTCAAACCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 72 bp GAGCAGGGCGACCATGGCTCTGCCTACCGCCTGCATTaGCCTGATAAAGCACCACTGGATCATAGCCATGGC +
Preference number: 6 (lower is better)
Translates to: EQGDHGSAYRLH*PDKAPLDHSHG
Trigger: GCCATGGCTATGATCCAGTGGTGCTTTATCAGGCAAATGCAGGCGGTAGGCAGAGCCATGGTCGCCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 72 bp CATCTATACCTTGCAGCCTGCTCAAGGCAACCAGCTTaGTGCCATCCCGGCTCCACACACATCCCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: HLYLAACSRQPA*CHPGSTHIPEL
Trigger: GAGCTCAGGGATGTGTGTGGAGCCGGGATGGCATCAAGCTGGTTGCCTTGAGCAGGCTGCAAGGTATAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 72 bp TGGCTGGCAAAGGTTTACTATCTGGCCTTGAAAGAATaGGTGTGTGGCCTGCCCTACAGGGCCCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: WLAKVYYLALKE*VCGLPYRAQAG
Trigger: GCCAGCCTGGGCCCTGTAGGGCAGGCCACACACTCATTCTTTCAAGGCCAGATAGTAAACCTTTGCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS GCA 72 bp GACAAACAACAAGAGCCACATCACCACGAGAGGCCTTaGTCTCGGCTAATTGAGGCGCTGCTATGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: DKQQEPHHHERP*SRLIEALLCPG
Trigger: CCCAGGGCATAGCAGCGCCTCAATTAGCCGAGAGCAAGGCCTCTCGTGGTGATGTGGCTCTTGTTGTTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS GCA 72 bp CCAGACCCTACCCTTTGCACCTGGGCATCTATACCTTaGAGCCTGCTCAAGGCAACCAGCTTGATGCCATCC +
Preference number: 6 (lower is better)
Translates to: PDPTLCTWASIP*SLLKATSLMPS
Trigger: GGATGGCATCAAGCTGGTTGCCTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp CTCCTCTTGTCACCCACGCATGGCACCAAACCCTCCTaGCTTAGGAAAGGACGTGCTGGCATTTACCTCCAG +
Preference number: 6 (lower is better)
Translates to: LLLSPTHGTKPS*LRKGRAGIYLQ
Trigger: CTGGAGGTAAATGCCAGCACGTCCTTTCCTAAGCCAGGAGGGTTTGGTGCCATGCGTGGGTGACAAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000556795.1
CDS CCA 72 bp CCCGGAGGCTGGTGTAAGCGTGAATGTCTTTTTCTATaGCAAGAAGGTGGGCAGGCAGTGGCGAGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: PGGWCKRECLFL*QEGGQAVARRS
Trigger: GCTCCTTCTCGCCACTGCCTGCCCACCTTCTTGCCATAGAAAAAGACATTCACGCTTACACCAGCCTCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS CAA 72 bp GACCCATGGGATGCAGCCTCCCATGAACTTGATGACTaGGGAGGGAAGCCCCATCGTAGGCAATCACTGACC +
Preference number: 6 (lower is better)
Translates to: DPWDAASHELDD*GGKPHRRQSLT
Trigger: GGTCAGTGATTGCCTACGATGGGGCTTCCCTCCCAAGTCATCAAGTTCATGGGAGGCTGCATCCCATGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 72 bp CCCGTGCGTTGCCTCCTCCAGGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAATGTGTACAATTTCGA +
Preference number: 6 (lower is better)
Translates to: PVRCLLQEGSLL*GSARWKCVQFR
Trigger: TCGAAATTGTACACATTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGGAGGCAACGCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311141.7
CDS TCA 72 bp ATGACTTGGGAGGGAAGCCCCATCGTAGGCAATCACTaGCCTCTCAGGAGACCCCTCCATCAGACACACATC +
Preference number: 6 (lower is better)
Translates to: MTWEGSPIVGNH*PLRRPLHQTHI
Trigger: GATGTGTGTCTGATGGAGGGGTCTCCTGAGAGGTCAGTGATTGCCTACGATGGGGCTTCCCTCCCAAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS TCA 72 bp CCACCCCCACTCAGCGGCCTCAGCTCACCTTTCTGGTaGGAAAGTCAAACTTGGCGTCACACTGCATACATC +
Preference number: 6 (lower is better)
Translates to: PPPLSGLSSPFW*ESQTWRHTAYI
Trigger: GATGTATGCAGTGTGACGCCAAGTTTGACTTTCTCACCAGAAAGGTGAGCTGAGGCCGCTGAGTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS GCA 72 bp CCCCATGGCAAGGTGGTACTGTCCCGGCACCTCAGATaGTTGGTCGGCCTAAGGGTAAAGGTGGAATTGAAA +
Preference number: 6 (lower is better)
Translates to: PHGKVVLSRHLR*LVGLRVKVELK
Trigger: TTTCAATTCCACCTTTACCCTTAGGCCGACCAAGCATCTGAGGTGCCGGGACAGTACCACCTTGCCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp CTTCTGCAGCCGCCTCCGCCTTCACCACAGCACACGTaGCTGGCAAAGGTTTACTATCTGGCCTTGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LLQPPPPSPQHT*LAKVYYLALKE
Trigger: TTCTTTCAAGGCCAGATAGTAAACCTTTGCCAGCCACGTGTGCTGTGGTGAAGGCGGAGGCGGCTGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp CTGCCTACCGCCTGCATTTGCCTGATAAAGCACCACTaGATCATAGCCATGGCCGTCTGTCACCCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: LPTACICLIKHH*IIAMAVCHPVF
Trigger: GAAGACAGGGTGACAGACGGCCATGGCTATGATCCAGTGGTGCTTTATCAGGCAAATGCAGGCGGTAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CAA 72 bp ACCAGCGACGGAACGGTGGGAGTCAAAGGGGTCCTCTaGGGAGAGATGGAGGGTCTTTTGGCTTCTGATGAT +
Preference number: 6 (lower is better)
Translates to: TSDGTVGVKGVL*GEMEGLLASDD
Trigger: ATCATCAGAAGCCAAAAGACCCTCCATCTCTCCCAAGAGGACCCCTTTGACTCCCACCGTTCCGTCGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 72 bp AACATGGGTTACGGCACACGCATCTGTCAGCACAGTTaGCAGATAACGGGATGCGAGCTCCCCGTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: NMGYGTRICQHS*QITGCELPVSR
Trigger: TCTGCTGACGGGGAGCTCGCATCCCGTTATCTGCAAACTGTGCTGACAGATGCGTGTGCCGTAACCCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553724.1
ENST00000602552.1
CDS CAA 72 bp GTTCAGGGCTGGCAGGTACTGACAGAGAGCTGTCAATaGCTGGGTAACCCTCCCGCTGAGACAGAACTGAGA +
Preference number: 6 (lower is better)
Translates to: VQGWQVLTESCQ*LGNPPAETELR
Trigger: TCTCAGTTCTGTCTCAGCGGGAGGGTTACCCAGCAATTGACAGCTCTCTGTCAGTACCTGCCAGCCCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CAA 72 bp TCCAGACCCTACCCTTTGCACCTGGGCATCTATACCTaGCAGCCTGCTCAAGGCAACCAGCTTGATGCCATC +
Preference number: 6 (lower is better)
Translates to: SRPYPLHLGIYT*QPAQGNQLDAI
Trigger: GATGGCATCAAGCTGGTTGCCTTGAGCAGGCTGCAAGGTATAGATGCCCAGGTGCAAAGGGTAGGGTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CAA 90 bp GTTGAAAGAGACCCATGGGATGCAGCCTCCCATGAACTTGATGACTaGGGAGGGAAGCCCCATCGTAGGCAATCACTGACCTCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: VERDPWDAASHELDD*GGKPHRRQSLTSQE
Trigger: CTCCTGAGAGGTCAGTGATTGCCTACGATGGGGCTTCCCTCCCAAGTCATCAAGTTCATGGGAGGCTGCATCCCATGGGTCTCTTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CAA 90 bp CCTCAGCCTGTTCAGGGCTGGCAGGTACTGACAGAGAGCTGTCAATaGCTGGGTAACCCTCCCGCTGAGACAGAACTGAGAAAGTACATC +
Preference number: 6 (lower is better)
Translates to: PQPVQGWQVLTESCQ*LGNPPAETELRKYI
Trigger: GATGTACTTTCTCAGTTCTGTCTCAGCGGGAGGGTTACCCAGCAATTGACAGCTCTCTGTCAGTACCTGCCAGCCCTGAACAGGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS GCA 72 bp CTCGCCTCCCTCAGCTTCATGAGAACAAGACCCTCGTaGTCTGGGGTCCTTGGTAAGGATGAAACAAGGTGT +
Preference number: 6 (lower is better)
Translates to: LASLSFMRTRPS*SGVLGKDETRC
Trigger: ACACCTTGTTTCATCCTTACCAAGGACCCCAGAGCACGAGGGTCTTGTTCTCATGAAGCTGAGGGAGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp AGCTCTTCAGTCAGGGCTGGTGTTGAAAGAGACCCATaGGATGCAGCCTCCCATGAACTTGATGACTTGGGA +
Preference number: 6 (lower is better)
Translates to: SSSVRAGVERDP*DAASHELDDLG
Trigger: TCCCAAGTCATCAAGTTCATGGGAGGCTGCATCCCATGGGTCTCTTTCAACACCAGCCCTGACTGAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 72 bp AGAGCATGCATCCTGGCACTTCAGGTCCCTCCACACTaGACCCAACAGCAGTTCACCTTAACAACGCCTTTT +
Preference number: 6 (lower is better)
Translates to: RACILALQVPPH*TQQQFTLTTPF
Trigger: AAAAGGCGTTGTTAAGGTGAACTGCTGTTGGGTCCAGTGTGGAGGGACCTGAAGTGCCAGGATGCATGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 72 bp CATGGCAAGGTGGTACTGTCCCGGCACCTCAGATGCTaGGTCGGCCTAAGGGTAAAGGTGGAATTGAAATCA +
Preference number: 6 (lower is better)
Translates to: HGKVVLSRHLRC*VGLRVKVELKS
Trigger: TGATTTCAATTCCACCTTTACCCTTAGGCCGACCAAGCATCTGAGGTGCCGGGACAGTACCACCTTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 90 bp CTGAAGCCCCATGGCAAGGTGGTACTGTCCCGGCACCTCAGATGCTaGGTCGGCCTAAGGGTAAAGGTGGAATTGAAATCAGTTAGAAAT +
Preference number: 6 (lower is better)
Translates to: LKPHGKVVLSRHLRC*VGLRVKVELKSVRN
Trigger: ATTTCTAACTGATTTCAATTCCACCTTTACCCTTAGGCCGACCAAGCATCTGAGGTGCCGGGACAGTACCACCTTGCCATGGGGCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp CGTGCTGGCATTTACCTCCAGGAGGGAAGCCTTCTGTaGGGATCTGCACGGTGGAAATGTGTACAATTTCGA +
Preference number: 6 (lower is better)
Translates to: RAGIYLQEGSLL*GSARWKCVQFR
Trigger: TCGAAATTGTACACATTTCCACCGTGCAGATCCTCACAGAAGGCTTCCCTCCTGGAGGTAAATGCCAGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553724.1
ENST00000554630.5
ENST00000556795.1
CDS TCA 72 bp GAGGAAGGTGGCTCCTTGGGAACACAAAAGCAAACGTaGGAACAGGGCCTGCTTCTTTTCCACCTAACCCTT +
Preference number: 6 (lower is better)
Translates to: EEGGSLGTQKQT*EQGLLLFHLTL
Trigger: AAGGGTTAGGTGGAAAAGAAGCAGGCCCTGTTCTCACGTTTGCTTTTGTGTTCCCAAGGAGCCACCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556795.1
CDS CCA 72 bp GAAGCTGTAAGACTCACAAGCCAGGGCTCACAAGGCTaGACTTTGTTGGCCAAGAGTGTTCTATGCACACAG +
Preference number: 6 (lower is better)
Translates to: EAVRLTSQGSQG*TLLAKSVLCTQ
Trigger: CTGTGTGCATAGAACACTCTTGGCCAACAAAGTCCAGCCTTGTGAGCCCTGGCTTGTGAGTCTTACAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp AGAATCAGCACAGTCACTTTCCACGGAAACAGGGCATaGCTGACACTCAAAATGAGCCATAACGGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: RISTVTFHGNRA*LTLKMSHNGWV
Trigger: CACCCAGCCGTTATGGCTCATTTTGAGTGTCAGCCATGCCCTGTTTCCGTGGAAAGTGACTGTGCTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CCA 72 bp ACCAAAGTAAGTGAATTCAGGTTTCACAAAGAACCTTaGCATGGACCACCCCGTGGACAGAAGCCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: TKVSEFRFHKEP*HGPPRGQKPGG
Trigger: GCCACCTGGCTTCTGTCCACGGGGTGGTCCATGCCAAGGTTCTTTGTGAAACCTGAATTCACTTACTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553724.1
ENST00000555163.2
ENST00000602552.1
CDS CAA 90 bp AACAATACACTGCTGAAGAGAGCAGCTCTTCAGTCAGGGCTGGTGTaGAAAGAGACCCATGGGATGCAGCCTCCCATGAACTTGATGACT +
Preference number: 6 (lower is better)
Translates to: NNTLLKRAALQSGLV*KETHGMQPPMNLMT
Trigger: AGTCATCAAGTTCATGGGAGGCTGCATCCCATGGGTCTCTTTCAACACCAGCCCTGACTGAAGAGCTGCTCTCTTCAGCAGTGTATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554757.1
CDS CCA 72 bp AGAATGTACAAAGGTAGACAGAAACAGGAAGGTGACTaGGCTCAGGGCCCACCAGGAATTCTGACAGCACAA +
Preference number: 6 (lower is better)
Translates to: RMYKGRQKQEGD*AQGPPGILTAQ
Trigger: TTGTGCTGTCAGAATTCCTGGTGGGCCCTGAGCCCAGTCACCTTCCTGTTTCTGTCTACCTTTGTACATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS CAA 72 bp GTAAGACTCACAAGCCAGGGCTCACAAGGCTGGACTTaGTTGGCCAAGAGTGTTCTATGCACACAGAATGTA +
Preference number: 6 (lower is better)
Translates to: VRLTSQGSQGWT*LAKSVLCTQNV
Trigger: TACATTCTGTGTGCATAGAACACTCTTGGCCAACAAAGTCCAGCCTTGTGAGCCCTGGCTTGTGAGTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp GTCAATTGCTGGGTAACCCTCCCGCTGAGACAGAACTaGGAAAGTACATCTGCTGCGGTATCTTCATTTATG +
Preference number: 6 (lower is better)
Translates to: VNCWVTLPLRQN*ESTSAAVSSFM
Trigger: CATAAATGAAGATACCGCAGCAGATGTACTTTCTCAGTTCTGTCTCAGCGGGAGGGTTACCCAGCAATTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp CCCTTTGTTGTCTTACAGTTTAAGTCTCCACTCACCTaGCGAGTTCTAAAGCCACTGAGTAAATACACGCCC +
Preference number: 6 (lower is better)
Translates to: PFVVLQFKSPLT*RVLKPLSKYTP
Trigger: GGGCGTGTATTTACTCAGTGGCTTTAGAACTCGCCAGGTGAGTGGAGACTTAAACTGTAAGACAACAAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 72 bp GATACGTTAGAGCATTTAGAGCAGAGGAAATCATTATaGCATGCTGAGGCAAATGTCCCTTTGTTGTCTTAC +
Preference number: 6 (lower is better)
Translates to: DTLEHLEQRKSL*HAEANVPLLSY
Trigger: GTAAGACAACAAAGGGACATTTGCCTCAGCATGTCATAATGATTTCCTCTGCTCTAAATGCTCTAACGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS TCA 72 bp TTTTGGCTTCTGATGATTAAGGGCTCGGCTGAATATTaGCCAAGAATCATCCATGTTCTAAGCACAATAATC +
Preference number: 6 (lower is better)
Translates to: FWLLMIKGSAEY*PRIIHVLSTII
Trigger: GATTATTGTGCTTAGAACATGGATGATTCTTGGTCAATATTCAGCCGAGCCCTTAATCATCAGAAGCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555501.1
CDS TCA 72 bp AGAGCATTTAGAGCAGAGGAAATCATTATGACATGCTaGGGCAAATGTCCCTTTGTTGTCTTACAGTTTAAG +
Preference number: 6 (lower is better)
Translates to: RAFRAEEIIMTC*GKCPFVVLQFK
Trigger: CTTAAACTGTAAGACAACAAAGGGACATTTGCCTCAGCATGTCATAATGATTTCCTCTGCTCTAAATGCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553724.1
CDS CCA 72 bp TGGGGATCTCAGTTATTGCATTTGGGGCTTTATCCTTaGTTTGAATCCAACAATAAACCGAATGATACGTTA +
Preference number: 6 (lower is better)
Translates to: WGSQLLHLGLYP*FESNNKPNDTL
Trigger: TAACGTATCATTCGGTTTATTGTTGGATTCAAACCAAGGATAAAGCCCCAAATGCAATAACTGAGATCCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553724.1