Pregenerated sensors for ZFYVE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165861Ensembl transcript IDs: ENST00000318876.9, ENST00000394207.6, ENST00000553891.5, ENST00000554145.1, ENST00000554250.1, ENST00000555072.1, ENST00000556040.1, ENST00000556143.6, ENST00000556761.1
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CCTCGATACGCCCCGAGTGCCTTTCATATGTATATATaGGAGAGAGATATACACATATATATTCATTATTTT | + |
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Preference number: 3 (lower is better) Translates to: PRYAPSAFHMYI*ERDIHIYIHYF Trigger: AAAATAATGAATATATATGTGTATATCTCTCTCTCATATATACATATGAAAGGCACTCGGGGCGTATCGAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000318876.9 ENST00000556143.6 |
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| CDS GCA 90 bp | TGGCCAGGTTTGAGTCTTATCCGCTCATGGTTTCTCAGGCGCTCCTaGCGATGGAGCTCCTCCTCGCAGCGGAGACACTGCAGACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: WPGLSLIRSWFLRRS*RWSSSSQRRHCRLQ Trigger: CTGCAGTCTGCAGTGTCTCCGCTGCGAGGAGGAGCTCCATCGGCAGGAGCGCCTGAGAAACCATGAGCGGATAAGACTCAAACCTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 90 bp | ACTCCCGGGTGCCGGGGAGAACGGGTGGTGTTATTCTCTAGTAGCTaGTCCAAAGCACGCCGAAGCCCAGAAAAGTCCGTGGGAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: TPGCRGERVVLFSSS*SKARRSPEKSVGGL Trigger: CAACCCTCCCACGGACTTTTCTGGGCTTCGGCGTGCTTTGGAGCAGCTACTAGAGAATAACACCACCCGTTCTCCCCGGCACCCGGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | GGCCCCCAGGAGCCCTTCCGTATCGATCACTGCTACTTTGTGAACTaGGTCATAGGCTGCCCACACTCCCACAGTGCAGGACTCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: GPQEPFRIDHCYFVN*VIGCPHSHSAGLLG Trigger: ACCCAGGAGTCCTGCACTGTGGGAGTGTGGGCAGCCTATGACCCAGTTCACAAAGTAGCAGTGATCGATACGGAAGGGCTCCTGGGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS TCA 90 bp | GAAGTCACAGCCTTGGTGGGTCCAAGGCTAAGCTCGGACACCGACTaGGCCATGAAGTTCATCCCGTCCAACAGGCGCTGGGCAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: EVTALVGPRLSSDTD*AMKFIPSNRRWAAL Trigger: CAATGCTGCCCAGCGCCTGTTGGACGGGATGAACTTCATGGCTCAGTCGGTGTCCGAGCTTAGCCTTGGACCCACCAAGGCTGTGACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554145.1 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 |
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| CDS GCA 90 bp | CCTAGTGGTATGTCAATGGCTGTCACCACGGCTCCCAGAGTGTTCTaGACGGCCTCGCCCACCTTCCGAGCAATGAGCGTTCCACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PSGMSMAVTTAPRVF*TASPTFRAMSVPPS Trigger: TGAAGGTGGAACGCTCATTGCTCGGAAGGTGGGCGAGGCCGTGCAGAACACTCTGGGAGCCGTGGTGACAGCCATTGACATACCACTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 ENST00000556761.1 |
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| CDS CCA 90 bp | GGTTTGAGTCTTATCCGCTCATGGTTTCTCAGGCGCTCCTGCCGATaGAGCTCCTCCTCGCAGCGGAGACACTGCAGACTGCAGCACTCA | + |
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Preference number: 5 (lower is better) Translates to: GLSLIRSWFLRRSCR*SSSSQRRHCRLQHS Trigger: TGAGTGCTGCAGTCTGCAGTGTCTCCGCTGCGAGGAGGAGCTCCATCGGCAGGAGCGCCTGAGAAACCATGAGCGGATAAGACTCAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 90 bp | CTCAGGCGCTCCTGCCGATGGAGCTCCTCCTCGCAGCGGAGACACTaGAGACTGCAGCACTCATCACACTCAAAGATAGCTTCATCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LRRSCRWSSSSQRRH*RLQHSSHSKIASSV Trigger: GACTGATGAAGCTATCTTTGAGTGTGATGAGTGCTGCAGTCTGCAGTGTCTCCGCTGCGAGGAGGAGCTCCATCGGCAGGAGCGCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 90 bp | CCCTTCCGTATCGATCACTGCTACTTTGTGAACTGGGTCATAGGCTaGCCACACTCCCACAGTGCAGGACTCCTGGGTCGGGGAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: PFRIDHCYFVNWVIG*PHSHSAGLLGRGGF Trigger: AAAACCTCCCCGACCCAGGAGTCCTGCACTGTGGGAGTGTGGGCAGCCTATGACCCAGTTCACAAAGTAGCAGTGATCGATACGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 90 bp | AGCGTAACTTTCCTGGCACATCAGCCCCGGATTCAGGCCCTTCTCTaGTGGGGAAGTCTGGGCACTCATACTCACGCTGGTAAGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: SVTFLAHQPRIQALL*WGSLGTHTHAGKET Trigger: TGTTTCCTTACCAGCGTGAGTATGAGTGCCCAGACTTCCCCAGCAGAGAAGGGCCTGAATCCGGGGCTGATGTGCCAGGAAAGTTACGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | TGGCACATCAGCCCCGGATTCAGGCCCTTCTCTGCTGGGGAAGTCTaGGCACTCATACTCACGCTGGTAAGGAAACACACCCACCATATA | + |
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Preference number: 5 (lower is better) Translates to: WHISPGFRPFSAGEV*ALILTLVRKHTHHI Trigger: TATATGGTGGGTGTGTTTCCTTACCAGCGTGAGTATGAGTGCCCAGACTTCCCCAGCAGAGAAGGGCCTGAATCCGGGGCTGATGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | GTAACTTTCCTGGCACATCAGCCCCGGATTCAGGCCCTTCTCTGCTaGGGAAGTCTGGGCACTCATACTCACGCTGGTAAGGAAACACAC | + |
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Preference number: 5 (lower is better) Translates to: VTFLAHQPRIQALLC*GSLGTHTHAGKETH Trigger: GTGTGTTTCCTTACCAGCGTGAGTATGAGTGCCCAGACTTCCCCAGCAGAGAAGGGCCTGAATCCGGGGCTGATGTGCCAGGAAAGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | ACCCTGAGCCAGGCACAAGGCCACGACCAGACCTTGATTACTAACTaGGCCTCAGATGCTGAACACAGAAAGGGTAGCCGGAAACCCACA | + |
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Preference number: 5 (lower is better) Translates to: TLSQAQGHDQTLITN*ASDAEHRKGSRKPT Trigger: TGTGGGTTTCCGGCTACCCTTTCTGTGTTCAGCATCTGAGGCCCAGTTAGTAATCAAGGTCTGGTCGTGGCCTTGTGCCTGGCTCAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS TCA 90 bp | CCATCCAGGGGGAGTCAGTGGAAGCAGATGTTTTGGGCACTACACTaGCTTCCTCGCCTCTCTCATAGCAGGCCTTGCAGGTATACACTC | + |
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Preference number: 5 (lower is better) Translates to: PSRGSQWKQMFWALH*LPRLSHSRPCRYTL Trigger: GAGTGTATACCTGCAAGGCCTGCTATGAGAGAGGCGAGGAAGTCAGTGTAGTGCCCAAAACATCTGCTTCCACTGACTCCCCCTGGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554250.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS CCA 90 bp | GTGAGTTGCACACTCACCGTGGCCAACTCAGAACCACTAACTCCCTaGCAGGGAAGAACGGAGACACACCAGGAATCCCTCTGGCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: VSCTLTVANSEPLTP*QGRTETHQESLWLY Trigger: ATAAAGCCAGAGGGATTCCTGGTGTGTCTCCGTTCTTCCCTGCCAGGGAGTTAGTGGTTCTGAGTTGGCCACGGTGAGTGTGCAACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556040.1 |
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| CDS GCA 90 bp | AGGCCTTGCAGGTATACACTCGGTTGTCATACTGGTGGGAGTATCTaGAGCGGCTCTTGGCTTCATGAGGCACTCCTTCCTTCCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: RPCRYTLGCHTGGSI*SGSWLHEALLPSHD Trigger: ATCATGGGAAGGAAGGAGTGCCTCATGAAGCCAAGAGCCGCTGCAGATACTCCCACCAGTATGACAACCGAGTGTATACCTGCAAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554250.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS TCA 90 bp | AGTGGTGGCCTTGAGCTCCTTGGTGAAGTGCTTCAGATAAGCTTCTaGGGCATCCCCAAGGAATTTGAAGAGGTCGTTATGCAGCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: SGGLELLGEVLQISF*GIPKEFEEVVMQPV Trigger: GACCGGCTGCATAACGACCTCTTCAAATTCCTTGGGGATGCCTCAGAAGCTTATCTGAAGCACTTCACCAAGGAGCTCAAGGCCACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | CACACATGCACAATCTCTGTCCGCACCACCGTATCCACAGGATCTTaGTTTCCAAACCAGTACTGCCGACCAGACCAGGCATATTTTGCG | + |
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Preference number: 5 (lower is better) Translates to: HTCTISVRTTVSTGS*FPNQYCRPDQAYFA Trigger: CGCAAAATATGCCTGGTCTGGTCGGCAGTACTGGTTTGGAAACCAAGATCCTGTGGATACGGTGGTGCGGACAGAGATTGTGCATGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318876.9 |
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| CDS CCA 90 bp | GGAAAGGAAGCCTGGTGGACAGTGAGTTTCCTTTCACTAAGTGTCTaGGTTGAAGCTGGGTGCTCTCTTGCTCTGGGTGCTGTAGCGTTA | + |
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Preference number: 5 (lower is better) Translates to: GKEAWWTVSFLSLSV*VEAGCSLALGAVAL Trigger: TAACGCTACAGCACCCAGAGCAAGAGAGCACCCAGCTTCAACCCAGACACTTAGTGAAAGGAAACTCACTGTCCACCAGGCTTCCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556761.1 |
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| CDS GCA 90 bp | ATACCTTGCAGGTATACACTCGGTTGTCATACTGGTGGGAGTATCTaGAGCGGCTCTTGGCTTCATGAGGCACTCCTTCCTTCCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: IPCRYTLGCHTGGSI*SGSWLHEALLPSHD Trigger: ATCATGGGAAGGAAGGAGTGCCTCATGAAGCCAAGAGCCGCTGCAGATACTCCCACCAGTATGACAACCGAGTGTATACCTGCAAGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554145.1 |
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| CDS TCA 90 bp | CATACTCACGCTGGTAAGGAAACACACCCACCATATAATAGTCACTaGGCTTGCCCCGGGGGTGAAGACGAAGATTTGAGTCTGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: HTHAGKETHPPYNSH*ACPGGEDEDLSLKT Trigger: AGTCTTCAGACTCAAATCTTCGTCTTCACCCCCGGGGCAAGCTCAGTGACTATTATATGGTGGGTGTGTTTCCTTACCAGCGTGAGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | TATACACTCGGTTGTCATACTGGTGGGAGTATCTGCAGCGGCTCTTaGCTTCATGAGGCACTCCTTCCTTCCCATGATTCATGCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: YTLGCHTGGSICSGS*LHEALLPSHDSCFS Trigger: AGAAAAGCATGAATCATGGGAAGGAAGGAGTGCCTCATGAAGCCAAGAGCCGCTGCAGATACTCCCACCAGTATGACAACCGAGTGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554145.1 ENST00000554250.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS TCA 90 bp | CTGGGCAGCATTGTTGTTGTCCTTCAGAAACCCATCAGTCTGAAATaGAAACGCAGGCTTCCATCATGCTCTGAGAAGGGAGTGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LGSIVVVLQKPISLK*KRRLPSCSEKGVKG Trigger: TCCTTTCACTCCCTTCTCAGAGCATGATGGAAGCCTGCGTTTTCATTTCAGACTGATGGGTTTCTGAAGGACAACAACAATGCTGCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556040.1 |
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| CDS CCA 90 bp | GAGCTTTCTAGTAACGCGTTATCTGAGAATGGAAAGGAAGCCTGGTaGACAGTGAGTTTCCTTTCACTAAGTGTCTGGGTTGAAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ELSSNALSENGKEAW*TVSFLSLSVWVEAG Trigger: CCCAGCTTCAACCCAGACACTTAGTGAAAGGAAACTCACTGTCCACCAGGCTTCCTTTCCATTCTCAGATAACGCGTTACTAGAAAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556761.1 |
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| CDS TCA 90 bp | AAAGATGTGGTCAAAATTGACTTGGAAGGGTCTTTTATGGCTATCTaGGAGAGGTCTGATGGGTTCACGGTGGTGGGTTCATCGGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: KDVVKIDLEGSFMAI*ERSDGFTVVGSSVG Trigger: TCCAACCGATGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGACCACATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | AAGGGTCTTTTATGGCTATCTGAGAGAGGTCTGATGGGTTCACGGTaGTGGGTTCATCGGTTGGACATCAGCTACAAAGTTTTGGTAATG | + |
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Preference number: 5 (lower is better) Translates to: KGLLWLSERGLMGSR*WVHRLDISYKVLVM Trigger: CATTACCAAAACTTTGTAGCTGATGTCCAACCGATGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAGCCATAAAAGACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | GTGCAAGCAAAGATGTGGTCAAAATTGACTTGGAAGGGTCTTTTATaGCTATCTGAGAGAGGTCTGATGGGTTCACGGTGGTGGGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VQAKMWSKLTWKGLL*LSERGLMGSRWWVH Trigger: ATGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGACCACATCTTTGCTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | GGTCTTTTATGGCTATCTGAGAGAGGTCTGATGGGTTCACGGTGGTaGGTTCATCGGTTGGACATCAGCTACAAAGTTTTGGTAATGAAA | + |
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Preference number: 5 (lower is better) Translates to: GLLWLSERGLMGSRW*VHRLDISYKVLVMK Trigger: TTTCATTACCAAAACTTTGTAGCTGATGTCCAACCGATGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAGCCATAAAAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | CAAGAGCTTTCTAGTAACGCGTTATCTGAGAATGGAAAGGAAGCCTaGTGGACAGTGAGTTTCCTTTCACTAAGTGTCTGGGTTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: QELSSNALSENGKEA*WTVSFLSLSVWVEA Trigger: AGCTTCAACCCAGACACTTAGTGAAAGGAAACTCACTGTCCACCAGGCTTCCTTTCCATTCTCAGATAACGCGTTACTAGAAAGCTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556761.1 |
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| CDS CCA 90 bp | TTCATCCTCCATAAAGTGCAAGCAAAGATGTGGTCAAAATTGACTTaGAAGGGTCTTTTATGGCTATCTGAGAGAGGTCTGATGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: FILHKVQAKMWSKLT*KGLLWLSERGLMGS Trigger: TGAACCCATCAGACCTCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGACCACATCTTTGCTTGCACTTTATGGAGGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 90 bp | ATTTGGTTTGATGGTTTCATCCTCCATAAAGTGCAAGCAAAGATGTaGTCAAAATTGACTTGGAAGGGTCTTTTATGGCTATCTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: IWFDGFILHKVQAKM*SKLTWKGLLWLSER Trigger: TCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGACCACATCTTTGCTTGCACTTTATGGAGGATGAAACCATCAAACCAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 72 bp | TGGTCCCAGCCACGAGAAGGAACAGCCCGGCGGTCATaGGAGCACTCATCACAGAAGCCCTGTCCGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: WSQPREGTARRS*EHSSQKPCPQA Trigger: GGCCTGCGGACAGGGCTTCTGTGATGAGTGCTCCCATGACCGCCGGGCTGTTCCTTCTCGTGGCTGGGACCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 |
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| CDS CAA 90 bp | CGGCAGATCCATCCTCATCTCCATCTCCGCCACCCTCCTCCTTCGTaGCCTCCCGGGCTTCCTCCTCTCCTGTTGTCAGTTGGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: RQIHPHLHLRHPPPS*PPGLPPLLLSVGIS Trigger: GCTGATCCCAACTGACAACAGGAGAGGAGGAAGCCCGGGAGGCAACGAAGGAGGAGGGTGGCGGAGATGGAGATGAGGATGGATCTGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS TCA 72 bp | CAGGGAAACGGCCCAGCTTCCGGAACCGGTCCTGGATaGGCTTCTCTGGCACCTCTGAGGGATGATCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: QGNGPASGTGPG*ASLAPLRDDQS Trigger: GCTCTGATCATCCCTCAGAGGTGCCAGAGAAGCTCATCCAGGACCGGTTCCGGAAGCTGGGCCGTTTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS TCA 72 bp | GCCTTGGTGGGTCCAAGGCTAAGCTCGGACACCGACTaGGCCATGAAGTTCATCCCGTCCAACAGGCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALVGPRLSSDTD*AMKFIPSNRRW Trigger: CCAGCGCCTGTTGGACGGGATGAACTTCATGGCTCAGTCGGTGTCCGAGCTTAGCCTTGGACCCACCAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554145.1 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 |
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| CDS TCA 72 bp | GAGTGTTCTGCACGGCCTCGCCCACCTTCCGAGCAATaGGCGTTCCACCTTCATCGTCCACTTGTGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: ECSARPRPPSEQ*AFHLHRPLVPR Trigger: CCGAGGCACAAGTGGACGATGAAGGTGGAACGCTCATTGCTCGGAAGGTGGGCGAGGCCGTGCAGAACACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 ENST00000556761.1 |
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| CDS CCA 72 bp | CTTATCCGCTCATGGTTTCTCAGGCGCTCCTGCCGATaGAGCTCCTCCTCGCAGCGGAGACACTGCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: LIRSWFLRRSCR*SSSSQRRHCRL Trigger: CAGTCTGCAGTGTCTCCGCTGCGAGGAGGAGCTCCATCGGCAGGAGCGCCTGAGAAACCATGAGCGGATAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 72 bp | TTCCTGGCACATCAGCCCCGGATTCAGGCCCTTCTCTaGTGGGGAAGTCTGGGCACTCATACTCACGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: FLAHQPRIQALL*WGSLGTHTHAG Trigger: ACCAGCGTGAGTATGAGTGCCCAGACTTCCCCAGCAGAGAAGGGCCTGAATCCGGGGCTGATGTGCCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 72 bp | TTGAGTCTTATCCGCTCATGGTTTCTCAGGCGCTCCTaGCGATGGAGCTCCTCCTCGCAGCGGAGACACTGC | + |
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Preference number: 6 (lower is better) Translates to: LSLIRSWFLRRS*RWSSSSQRRHC Trigger: GCAGTGTCTCCGCTGCGAGGAGGAGCTCCATCGGCAGGAGCGCCTGAGAAACCATGAGCGGATAAGACTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 72 bp | CACGGTGGCCCCCAGGAGCCCTTCCGTATCGATCACTaGTACTTTGTGAACTGGGTCATAGGCTGCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: HGGPQEPFRIDH*YFVNWVIGCPH Trigger: GTGTGGGCAGCCTATGACCCAGTTCACAAAGTAGCAGTGATCGATACGGAAGGGCTCCTGGGGGCCACCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 72 bp | ATGTCAATGGCTGTCACCACGGCTCCCAGAGTGTTCTaGACGGCCTCGCCCACCTTCCGAGCAATGAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: MSMAVTTAPRVF*TASPTFRAMSV Trigger: AACGCTCATTGCTCGGAAGGTGGGCGAGGCCGTGCAGAACACTCTGGGAGCCGTGGTGACAGCCATTGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 ENST00000556761.1 |
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| CDS CCA 72 bp | CTGGCACATCAGCCCCGGATTCAGGCCCTTCTCTGCTaGGGAAGTCTGGGCACTCATACTCACGCTGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: LAHQPRIQALLC*GSLGTHTHAGK Trigger: CTTACCAGCGTGAGTATGAGTGCCCAGACTTCCCCAGCAGAGAAGGGCCTGAATCCGGGGCTGATGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 90 bp | CTCCTCCTTCGTTGCCTCCCGGGCTTCCTCCTCTCCTGTTGTCAGTaGGGATCAGCTGATCGGAGTGAACTTCTCCCAGCTCGGACTAAC | + |
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Preference number: 6 (lower is better) Translates to: LLLRCLPGFLLSCCQ*GSADRSELLPARTN Trigger: GTTAGTCCGAGCTGGGAGAAGTTCACTCCGATCAGCTGATCCCAACTGACAACAGGAGAGGAGGAAGCCCGGGAGGCAACGAAGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318876.9 |
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| CDS CCA 72 bp | AGCCCCGGATTCAGGCCCTTCTCTGCTGGGGAAGTCTaGGCACTCATACTCACGCTGGTAAGGAAACACACC | + |
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Preference number: 6 (lower is better) Translates to: SPGFRPFSAGEV*ALILTLVRKHT Trigger: GGTGTGTTTCCTTACCAGCGTGAGTATGAGTGCCCAGACTTCCCCAGCAGAGAAGGGCCTGAATCCGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 72 bp | ACGTCGCACACTTGTTGCAGCTCAGAATCTGGGAGTTaGGCCTCCAGTAGGCAGGGGCGATCTGGTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TSHTCCSSESGS*ASSRQGRSGLS Trigger: TGACAGACCAGATCGCCCCTGCCTACTGGAGGCCCAACTCCCAGATTCTGAGCTGCAACAAGTGTGCGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554145.1 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 |
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| CDS CCA 72 bp | TGGCCGCGTCCTTTACCAGACCTAGTGGTATGTCAATaGCTGTCACCACGGCTCCCAGAGTGTTCTGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: WPRPLPDLVVCQ*LSPRLPECSAR Trigger: CCGTGCAGAACACTCTGGGAGCCGTGGTGACAGCCATTGACATACCACTAGGTCTGGTAAAGGACGCGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 |
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| CDS CCA 72 bp | GGAGGATTTCGTGGTCAGGCACCCAGTACGCAGGCCTaGCCGCGTCCTTTACCAGACCTAGTGGTATGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: GGFRGQAPSTQA*PRPLPDLVVCQ Trigger: TTGACATACCACTAGGTCTGGTAAAGGACGCGGCCAGGCCTGCGTACTGGGTGCCTGACCACGAAATCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000555072.1 ENST00000556040.1 ENST00000556143.6 |
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| CDS CAA 72 bp | CGTTGCCTCCCGGGCTTCCTCCTCTCCTGTTGTCAGTaGGGATCAGCTGATCGGAGTGAACTTCTCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RCLPGFLLSCCQ*GSADRSELLPA Trigger: AGCTGGGAGAAGTTCACTCCGATCAGCTGATCCCAACTGACAACAGGAGAGGAGGAAGCCCGGGAGGCAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318876.9 |
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| CDS TCA 72 bp | AGCTGTGCGCCATCTGGTCATCGGGGATCTCACCGCTaGAGCGGTCACTTAGTGCCTCACATCATTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SCAPSGHRGSHR*SGHLVPHIIPQ Trigger: CTGTGGAATGATGTGAGGCACTAAGTGACCGCTTCAGCGGTGAGATCCCCGATGACCAGATGGCGCACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555072.1 |
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| CDS GCA 72 bp | TCCTGCCGATGGAGCTCCTCCTCGCAGCGGAGACACTaGAGACTGCAGCACTCATCACACTCAAAGATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCRWSSSSQRRH*RLQHSSHSKIA Trigger: AGCTATCTTTGAGTGTGATGAGTGCTGCAGTCTGCAGTGTCTCCGCTGCGAGGAGGAGCTCCATCGGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 72 bp | ATCGATCACTGCTACTTTGTGAACTGGGTCATAGGCTaGCCACACTCCCACAGTGCAGGACTCCTGGGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: IDHCYFVNWVIG*PHSHSAGLLGR Trigger: CCGACCCAGGAGTCCTGCACTGTGGGAGTGTGGGCAGCCTATGACCCAGTTCACAAAGTAGCAGTGATCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS GCA 72 bp | TGCCGGGGAGAACGGGTGGTGTTATTCTCTAGTAGCTaGTCCAAAGCACGCCGAAGCCCAGAAAAGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRGERVVLFSSS*SKARRSPEKSV Trigger: CACGGACTTTTCTGGGCTTCGGCGTGCTTTGGAGCAGCTACTAGAGAATAACACCACCCGTTCTCCCCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 72 bp | ACACTCACCGTGGCCAACTCAGAACCACTAACTCCCTaGCAGGGAAGAACGGAGACACACCAGGAATCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLTVANSEPLTP*QGRTETHQESL Trigger: GAGGGATTCCTGGTGTGTCTCCGTTCTTCCCTGCCAGGGAGTTAGTGGTTCTGAGTTGGCCACGGTGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556040.1 |
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| CDS CAA 90 bp | CAGAACAGCCTGACCCTGAGCCAGGCACAAGGCCACGACCAGACCTaGATTACTAACTGGGCCTCAGATGCTGAACACAGAAAGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QNSLTLSQAQGHDQT*ITNWASDAEHRKGS Trigger: GCTACCCTTTCTGTGTTCAGCATCTGAGGCCCAGTTAGTAATCAAGGTCTGGTCGTGGCCTTGTGCCTGGCTCAGGGTCAGGCTGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS TCA 72 bp | GGGAGTCAGTGGAAGCAGATGTTTTGGGCACTACACTaGCTTCCTCGCCTCTCTCATAGCAGGCCTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSQWKQMFWALH*LPRLSHSRPCR Trigger: CCTGCAAGGCCTGCTATGAGAGAGGCGAGGAAGTCAGTGTAGTGCCCAAAACATCTGCTTCCACTGACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554250.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS GCA 72 bp | TCCAAACCAGTACTGCCGACCAGACCAGGCATATTTTaGGAGACCCATCCAGGGGGAGTCAGTGGAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKPVLPTRPGIF*ETHPGGVSGSR Trigger: TCTGCTTCCACTGACTCCCCCTGGATGGGTCTCGCAAAATATGCCTGGTCTGGTCGGCAGTACTGGTTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318876.9 |
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| CDS CCA 72 bp | GAGCCCTTCCGTATCGATCACTGCTACTTTGTGAACTaGGTCATAGGCTGCCCACACTCCCACAGTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: EPFRIDHCYFVN*VIGCPHSHSAG Trigger: TCCTGCACTGTGGGAGTGTGGGCAGCCTATGACCCAGTTCACAAAGTAGCAGTGATCGATACGGAAGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 72 bp | CAGGCACAAGGCCACGACCAGACCTTGATTACTAACTaGGCCTCAGATGCTGAACACAGAAAGGGTAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QAQGHDQTLITN*ASDAEHRKGSR Trigger: CCGGCTACCCTTTCTGTGTTCAGCATCTGAGGCCCAGTTAGTAATCAAGGTCTGGTCGTGGCCTTGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS CAA 72 bp | TTCCAAACCAGTACTGCCGACCAGACCAGGCATATTTaGCGAGACCCATCCAGGGGGAGTCAGTGGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FQTSTADQTRHI*RDPSRGSQWKQ Trigger: CTGCTTCCACTGACTCCCCCTGGATGGGTCTCGCAAAATATGCCTGGTCTGGTCGGCAGTACTGGTTTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318876.9 |
||
| CDS CAA 72 bp | CACAATCTCTGTCCGCACCACCGTATCCACAGGATCTaGGTTTCCAAACCAGTACTGCCGACCAGACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HNLCPHHRIHRI*VSKPVLPTRPG Trigger: GCCTGGTCTGGTCGGCAGTACTGGTTTGGAAACCAAGATCCTGTGGATACGGTGGTGCGGACAGAGATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318876.9 |
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| CDS CAA 72 bp | CTGACCCTGAGCCAGGCACAAGGCCACGACCAGACCTaGATTACTAACTGGGCCTCAGATGCTGAACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTLSQAQGHDQT*ITNWASDAEHR Trigger: TCTGTGTTCAGCATCTGAGGCCCAGTTAGTAATCAAGGTCTGGTCGTGGCCTTGTGCCTGGCTCAGGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS TCA 72 bp | AGCTGTGCGCCATCTGGTCATCGGGGATCTCACCGCTaGAGCGGTCACTTAGTGCATCATTCCACAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCAPSGHRGSHR*SGHLVHHSTVS Trigger: AGAAACTGTGGAATGATGCACTAAGTGACCGCTTCAGCGGTGAGATCCCCGATGACCAGATGGCGCACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394207.6 |
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| CDS CCA 72 bp | ACAATCTCTGTCCGCACCACCGTATCCACAGGATCTTaGTTTCCAAACCAGTACTGCCGACCAGACCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TISVRTTVSTGS*FPNQYCRPDQA Trigger: TGCCTGGTCTGGTCGGCAGTACTGGTTTGGAAACCAAGATCCTGTGGATACGGTGGTGCGGACAGAGATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318876.9 |
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| CDS CCA 72 bp | GCCTGGTGGACAGTGAGTTTCCTTTCACTAAGTGTCTaGGTTGAAGCTGGGTGCTCTCTTGCTCTGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AWWTVSFLSLSV*VEAGCSLALGA Trigger: AGCACCCAGAGCAAGAGAGCACCCAGCTTCAACCCAGACACTTAGTGAAAGGAAACTCACTGTCCACCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556761.1 |
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| CDS CAA 72 bp | AAGTTCATCCCGTCCAACAGGCGCTGGGCAGCATTGTaGTTGTCCTTCAGAAACCCATCAGTTCCAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KFIPSNRRWAAL*LSFRNPSVPGH Trigger: GTGGCCTGGAACTGATGGGTTTCTGAAGGACAACAACAATGCTGCCCAGCGCCTGTTGGACGGGATGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554145.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS GCA 72 bp | AGGTATACACTCGGTTGTCATACTGGTGGGAGTATCTaGAGCGGCTCTTGGCTTCATGAGGCACTCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RYTLGCHTGGSI*SGSWLHEALLP Trigger: AGGAAGGAGTGCCTCATGAAGCCAAGAGCCGCTGCAGATACTCCCACCAGTATGACAACCGAGTGTATACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554145.1 ENST00000554250.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS GCA 72 bp | AGGACATTCGATCACATACCCAGACCAGGCATATTTTaGGAGACCCATCCAGGGGGAGTCAGTGGAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTFDHIPRPGIF*ETHPGGVSGSR Trigger: TCTGCTTCCACTGACTCCCCCTGGATGGGTCTCGCAAAATATGCCTGGTCTGGGTATGTGATCGAATGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000394207.6 ENST00000553891.5 ENST00000554250.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS CAA 72 bp | ATGAAGTTCATCCCGTCCAACAGGCGCTGGGCAGCATaGTTGTTGTCCTTCAGAAACCCATCAGTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: MKFIPSNRRWAA*LLSFRNPSVPG Trigger: GCCTGGAACTGATGGGTTTCTGAAGGACAACAACAATGCTGCCCAGCGCCTGTTGGACGGGATGAACTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000318876.9 ENST00000394207.6 ENST00000553891.5 ENST00000554145.1 ENST00000555072.1 ENST00000556143.6 |
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| CDS CAA 90 bp | CCACACATGCACAATCTCTGTCCGCACCACCGTATCCACAGGATCTaGGTTTCCAAACCAGTACTGCCGACCAGACCAGGCATATTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PHMHNLCPHHRIHRI*VSKPVLPTRPGIFC Trigger: GCAAAATATGCCTGGTCTGGTCGGCAGTACTGGTTTGGAAACCAAGATCCTGTGGATACGGTGGTGCGGACAGAGATTGTGCATGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318876.9 |
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| CDS CAA 90 bp | CAGATGCTGAACACAGAAAGGGTAGCCGGAAACCCACATGCCTCTTaGTTACACTTGCAATCAACAGCACTACAGAGGCACAGCGACTAC | + |
|
Preference number: 6 (lower is better) Translates to: QMLNTERVAGNPHAS*LHLQSTALQRHSDY Trigger: GTAGTCGCTGTGCCTCTGTAGTGCTGTTGATTGCAAGTGTAACAAAGAGGCATGTGGGTTTCCGGCTACCCTTTCTGTGTTCAGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS TCA 72 bp | GCTTCAGATAAGCTTCTGAGGCATCCCCAAGGAATTTaGAGAGGTCGTTATGCAGCCGGTCTGCATGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASDKLLRHPQGI*RGRYAAGLHEF Trigger: GAACTCATGCAGACCGGCTGCATAACGACCTCTTCAAATTCCTTGGGGATGCCTCAGAAGCTTATCTGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CCA 72 bp | TGGCTATCTGAGAGAGGTCTGATGGGTTCACGGTGGTaGGTTCATCGGTTGGACATCAGCTACAAAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WLSERGLMGSRW*VHRLDISYKVL Trigger: CAAAACTTTGTAGCTGATGTCCAACCGATGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 72 bp | GACATTCGATCACATACCTTGCAGGTATACACTCGGTaGTCATACTGGTGGGAGTATCTGCAGCGGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DIRSHTLQVYTR*SYWWEYLQRLL Trigger: CAAGAGCCGCTGCAGATACTCCCACCAGTATGACAACCGAGTGTATACCTGCAAGGTATGTGATCGAATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554145.1 |
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| CDS GCA 72 bp | AACAAAACAGAGAGGCAGGTAGGTATGGTACATGTCTaGTCAGCTGAGAAAGTCAACAAGACCCCGGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NKTERQVGMVHV*SAEKVNKTPEQ Trigger: TTGCTCCGGGGTCTTGTTGACTTTCTCAGCTGAGCAGACATGTACCATACCTACCTGCCTCTCTGTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556761.1 |
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| CDS CCA 72 bp | TTATGGCTATCTGAGAGAGGTCTGATGGGTTCACGGTaGTGGGTTCATCGGTTGGACATCAGCTACAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LWLSERGLMGSR*WVHRLDISYKV Trigger: AACTTTGTAGCTGATGTCCAACCGATGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAGCCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 72 bp | AACACAGAAAGGGTAGCCGGAAACCCACATGCCTCTTaGTTACACTTGCAATCAACAGCACTACAGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NTERVAGNPHAS*LHLQSTALQRH Trigger: GTGCCTCTGTAGTGCTGTTGATTGCAAGTGTAACAAAGAGGCATGTGGGTTTCCGGCTACCCTTTCTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS CAA 90 bp | AACACAGAAAGGGTAGCCGGAAACCCACATGCCTCTTTGTTACACTaGCAATCAACAGCACTACAGAGGCACAGCGACTACTATCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: NTERVAGNPHASLLH*QSTALQRHSDYYPC Trigger: ACAAGGATAGTAGTCGCTGTGCCTCTGTAGTGCTGTTGATTGCAAGTGTAACAAAGAGGCATGTGGGTTTCCGGCTACCCTTTCTGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS CAA 90 bp | CTATCTGAGAGAGGTCTGATGGGTTCACGGTGGTGGGTTCATCGGTaGGACATCAGCTACAAAGTTTTGGTAATGAAAGAAAGTGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSERGLMGSRWWVHR*DISYKVLVMKESGQ Trigger: CTGACCACTTTCTTTCATTACCAAAACTTTGTAGCTGATGTCCAACCGATGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS TCA 72 bp | GTCAAAATTGACTTGGAAGGGTCTTTTATGGCTATCTaGGAGAGGTCTGATGGGTTCACGGTGGTGGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VKIDLEGSFMAI*ERSDGFTVVGS Trigger: TGAACCCACCACCGTGAACCCATCAGACCTCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS TCA 72 bp | CTTGAGCTCCTTGGTGAAGTGCTTCAGATAAGCTTCTaGGGCATCCCCAAGGAATTTGAAGAGGTCGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LELLGEVLQISF*GIPKEFEEVVM Trigger: CATAACGACCTCTTCAAATTCCTTGGGGATGCCTCAGAAGCTTATCTGAAGCACTTCACCAAGGAGCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 72 bp | TCTTCTGCCTCCAGTGACTCCTGGAGATTACTGACATaGTACACAGTAACAGGGTGTCTCCTTTTGTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSASSDSWRLLT*YTVTGCLLLLP Trigger: GGGTAACAAAAGGAGACACCCTGTTACTGTGTACAATGTCAGTAATCTCCAGGAGTCACTGGAGGCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 72 bp | ATCAACAGCACTACAGAGGCACAGCGACTACTATCCTaGTATGAGGACACAGGGGAAAAAGAAATCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: INSTTEAQRLLS*YEDTGEKEISA Trigger: GGCTGAGATTTCTTTTTCCCCTGTGTCCTCATACAAGGATAGTAGTCGCTGTGCCTCTGTAGTGCTGTTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554250.1 |
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| CDS CCA 72 bp | AAGATGTGGTCAAAATTGACTTGGAAGGGTCTTTTATaGCTATCTGAGAGAGGTCTGATGGGTTCACGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KMWSKLTWKGLL*LSERGLMGSRW Trigger: CCACCGTGAACCCATCAGACCTCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGACCACATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 72 bp | AGAGGTCTGATGGGTTCACGGTGGTGGGTTCATCGGTaGGACATCAGCTACAAAGTTTTGGTAATGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGLMGSRWWVHR*DISYKVLVMKE Trigger: TTCTTTCATTACCAAAACTTTGTAGCTGATGTCCAACCGATGAACCCACCACCGTGAACCCATCAGACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 90 bp | GGTTCACGGTGGTGGGTTCATCGGTTGGACATCAGCTACAAAGTTTaGGTAATGAAAGAAAGTGGTCAGGAGCTTTTCAATATAATTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GSRWWVHRLDISYKV*VMKESGQELFNIIR Trigger: TCGAATTATATTGAAAAGCTCCTGACCACTTTCTTTCATTACCAAAACTTTGTAGCTGATGTCCAACCGATGAACCCACCACCGTGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 90 bp | GATGGTTTCATCCTCCATAAAGTGCAAGCAAAGATGTGGTCAAAATaGACTTGGAAGGGTCTTTTATGGCTATCTGAGAGAGGTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: DGFILHKVQAKMWSK*TWKGLLWLSERGLM Trigger: CATCAGACCTCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGACCACATCTTTGCTTGCACTTTATGGAGGATGAAACCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS TCA 72 bp | TCCTCCATAAAGTGCAAGCAAAGATGTGGTCAAAATTaGCTTGGAAGGGTCTTTTATGGCTATCTGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSIKCKQRCGQN*LGRVFYGYLRE Trigger: CTCTCTCAGATAGCCATAAAAGACCCTTCCAAGTCAATTTTGACCACATCTTTGCTTGCACTTTATGGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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| CDS CAA 72 bp | TTTGCTGCCTCTAAGACTCTTGTATTAGCAGCAACGTaGATTTGGTTTGATGGTTTCATCCTCCATAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FAASKTLVLAAT*IWFDGFILHKV Trigger: CACTTTATGGAGGATGAAACCATCAAACCAAATCAACGTTGCTGCTAATACAAGAGTCTTAGAGGCAGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318876.9 ENST00000553891.5 ENST00000556143.6 |
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