Pregenerated sensors for ZFR (Homo sapiens)
Ensembl gene IDs: ENSG00000056097Ensembl transcript IDs: ENST00000265069.13, ENST00000502988.5, ENST00000505204.1, ENST00000505366.1, ENST00000507465.1, ENST00000514356.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCAGCCGGCTGGGCACTGCGGCGGGCACGAAGAGTCGGGTCCCATaGCGGGACAAGAGACACAGAGGAGCCGAGACGCCGAGGGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: PSRLGTAAGTKSRVP*RDKRHRGAETPREG Trigger: GCCCTCCCTCGGCGTCTCGGCTCCTCTGTGTCTCTTGTCCCGCCATGGGACCCGACTCTTCGTGCCCGCCGCAGTGCCCAGCCGGCTGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505204.1 |
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| CDS GCA 90 bp | GTTGCCGGTCGCCATTTTGGCATCTTCCCCCAGCCGGCTGGGCACTaGGGCGGGCACGAAGAGTCGGGTCCCATGGCGGGACAAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: VAGRHFGIFPQPAGH*GGHEESGPMAGQET Trigger: TGTCTCTTGTCCCGCCATGGGACCCGACTCTTCGTGCCCGCCGCAGTGCCCAGCCGGCTGGGGGAAGATGCCAAAATGGCGACCGGCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505204.1 |
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| CDS CCA 90 bp | CAAAGTAGTTGCCGGTCGCCATTTTGGCATCTTCCCCCAGCCGGCTaGGCACTGCGGCGGGCACGAAGAGTCGGGTCCCATGGCGGGACA | + |
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Preference number: 5 (lower is better) Translates to: QSSCRSPFWHLPPAG*ALRRARRVGSHGGT Trigger: TGTCCCGCCATGGGACCCGACTCTTCGTGCCCGCCGCAGTGCCCAGCCGGCTGGGGGAAGATGCCAAAATGGCGACCGGCAACTACTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505204.1 |
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| CDS GCA 90 bp | GGTGGTCCCTGTCCAGGCAGCTGTTGCAGCAGCAGCAGCAGCTGCTaGTGCTGCCTGCTTCTGTTGCTGCTGCTGCTGTTGATAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: GGPCPGSCCSSSSSC*CCLLLLLLLLLIVG Trigger: TCCTACTATCAACAGCAGCAGCAGCAACAGAAGCAGGCAGCAGCAGCAGCTGCTGCTGCTGCTGCAACAGCTGCCTGGACAGGGACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265069.13 ENST00000505366.1 |
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| CDS GCA 90 bp | GGTCCCTGTCCAGGCAGCTGTTGCAGCAGCAGCAGCAGCTGCTGCTaGTGCCTGCTTCTGTTGCTGCTGCTGCTGTTGATAGTAGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GPCPGSCCSSSSSCC*CLLLLLLLLLIVGR Trigger: TCTTCCTACTATCAACAGCAGCAGCAGCAACAGAAGCAGGCAGCAGCAGCAGCTGCTGCTGCTGCTGCAACAGCTGCCTGGACAGGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265069.13 ENST00000505366.1 |
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| CDS GCA 90 bp | AAAGGTGGTCCCTGTCCAGGCAGCTGTTGCAGCAGCAGCAGCAGCTaGTGCTGCTGCCTGCTTCTGTTGCTGCTGCTGCTGTTGATAGTA | + |
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Preference number: 5 (lower is better) Translates to: KGGPCPGSCCSSSSS*CCCLLLLLLLLLIV Trigger: TACTATCAACAGCAGCAGCAGCAACAGAAGCAGGCAGCAGCAGCAGCTGCTGCTGCTGCTGCAACAGCTGCCTGGACAGGGACCACCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265069.13 ENST00000505366.1 |
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| CDS TCA 90 bp | GGATTGAATTGGCAAAATGCAGTGAGGAATGGGTGTTTGACCAGGTaGGCAAGACACTTCCTTAAGGTAGCATCAGTGTCACATGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GLNWQNAVRNGCLTR*ARHFLKVASVSHEP Trigger: TGGCTCATGTGACACTGATGCTACCTTAAGGAAGTGTCTTGCTCACCTGGTCAAACACCCATTCCTCACTGCATTTTGCCAATTCAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514356.5 |
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| CDS TCA 72 bp | GGGCCGCAGCCGCCGCCGCCGCCGCCCCGCTGTGGGTaGATCCAAAGTAGTTGCCGGTCGCCATTTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GPQPPPPPPRCG*IQSSCRSPFWH Trigger: ATGCCAAAATGGCGACCGGCAACTACTTTGGATTCACCCACAGCGGGGCGGCGGCGGCGGCGGCTGCGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000265069.13 ENST00000505204.1 ENST00000505366.1 |
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| CDS CCA 72 bp | CTGGGCACTGCGGCGGGCACGAAGAGTCGGGTCCCATaGCGGGACAAGAGACACAGAGGAGCCGAGACGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGTAAGTKSRVP*RDKRHRGAETP Trigger: CGGCGTCTCGGCTCCTCTGTGTCTCTTGTCCCGCCATGGGACCCGACTCTTCGTGCCCGCCGCAGTGCCCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505204.1 |
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| CDS CAA 72 bp | AGAATAGGCTACACCCGAAGCTGGCTGCTGGCTATATaGGGCCGCAGCCGCCGCCGCCGCCGCCCCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RIGYTRSWLLAI*GRSRRRRRPAV Trigger: CACAGCGGGGCGGCGGCGGCGGCGGCTGCGGCCCAATATAGCCAGCAGCCAGCTTCGGGTGTAGCCTATTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000265069.13 ENST00000505204.1 ENST00000505366.1 |
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| CDS CAA 90 bp | AGTTGGATGAGAATAGGCTACACCCGAAGCTGGCTGCTGGCTATATaGGGCCGCAGCCGCCGCCGCCGCCGCCCCGCTGTGGGTGAATCC | + |
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Preference number: 6 (lower is better) Translates to: SWMRIGYTRSWLLAI*GRSRRRRRPAVGES Trigger: GGATTCACCCACAGCGGGGCGGCGGCGGCGGCGGCTGCGGCCCAATATAGCCAGCAGCCAGCTTCGGGTGTAGCCTATTCTCATCCAACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000265069.13 ENST00000505204.1 ENST00000505366.1 |
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| CDS CAA 90 bp | TGCTGGTGGCCCCAGCTACTTGGGGGACTGAGGCGGGAGGATCGCTaGAGCCTGGGATCGTTTACTGGCTGCAGTAAGCTGAGATTGCGC | + |
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Preference number: 6 (lower is better) Translates to: CWWPQLLGGLRREDR*SLGSFTGCSKLRLR Trigger: GCGCAATCTCAGCTTACTGCAGCCAGTAAACGATCCCAGGCTCAAGCGATCCTCCCGCCTCAGTCCCCCAAGTAGCTGGGGCCACCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502988.5 |
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| CDS CAA 72 bp | CCCCAGCTACTTGGGGGACTGAGGCGGGAGGATCGCTaGAGCCTGGGATCGTTTACTGGCTGCAGTAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PQLLGGLRREDR*SLGSFTGCSKL Trigger: CAGCTTACTGCAGCCAGTAAACGATCCCAGGCTCAAGCGATCCTCCCGCCTCAGTCCCCCAAGTAGCTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502988.5 |
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| CDS CAA 72 bp | AGCAGCAGCAGCAGCTGCTGCTGCTGCCTGCTTCTGTaGCTGCTGCTGCTGTTGATAGTAGGAAGATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSCCCCLLL*LLLLLIVGRCS Trigger: GCTGCATCTTCCTACTATCAACAGCAGCAGCAGCAACAGAAGCAGGCAGCAGCAGCAGCTGCTGCTGCTGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000265069.13 ENST00000505366.1 |
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| CDS CAA 72 bp | ATGACGTATTCACAGTACAATTGTTTGCTGCAATGCTaGAAGGAGAGGCAGTCGGCTTTGAAGCAGATACAG | + |
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Preference number: 6 (lower is better) Translates to: MTYSQYNCLLQC*KERQSALKQIQ Trigger: CTGTATCTGCTTCAAAGCCGACTGCCTCTCCTTCAAGCATTGCAGCAAACAATTGTACTGTGAATACGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265069.13 |
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| CDS CAA 72 bp | TCACCATACCCGAGGTTACATCTAAAATGGATTGAATaGGCAAAATGCAGTGAGGAATGGGTGTTTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: SPYPRLHLKWIE*AKCSEEWVFDQ Trigger: CTGGTCAAACACCCATTCCTCACTGCATTTTGCCAATTCAATCCATTTTAGATGTAACCTCGGGTATGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514356.5 |
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| CDS CCA 72 bp | TCTGAACTGCCTGTAACTCCTCTTCAGTTGGATAAATaGTGGCATGTTTTGTCATTACATAACGGTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: SELPVTPLQLDK*WHVLSLHNGHQ Trigger: CTGATGACCGTTATGTAATGACAAAACATGCCACCATTTATCCAACTGAAGAGGAGTTACAGGCAGTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000265069.13 ENST00000507465.1 |
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