RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP90 (Homo sapiens)

Ensembl gene IDs: ENSG00000184939

Ensembl transcript IDs: ENST00000398253.6, ENST00000563169.7, ENST00000564558.5, ENST00000566573.5, ENST00000569109.5, ENST00000569323.5, ENST00000570495.5, ENST00000570884.1, ENST00000571382.5, ENST00000571720.2, ENST00000571809.5, ENST00000573113.3, ENST00000573161.1, ENST00000573685.5, ENST00000576305.5, ENST00000576805.5, ENST00000611381.4

Found 628 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACACATATGTCCTGGGCTCCCTCCCTGTCAATGAAGATGTGCTaGGTTTCAGAGTGGTGGCTGGATCTAGGCCAAGCACCAAACACA +
Preference number: 1 (lower is better)
Translates to: ATHMSWAPSLSMKMC*VSEWWLDLGQAPNT
Trigger: TGTGTTTGGTGCTTGGCCTAGATCCAGCCACCACTCTGAAACTCAGCACATCTTCATTGACAGGGAGGGAGCCCAGGACATATGTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR GCA 90 bp TCTTTGGGAGGCAGCTCTTGTGTAAAAGGAATCAATGTCCAGTTGTaGCCAAATTGGTCTGCATGGTCAATGTCAACACACCAACAAAGG +
Preference number: 1 (lower is better)
Translates to: SLGGSSCVKGINVQL*PNWSAWSMSTHQQR
Trigger: CCTTTGTTGGTGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR GCA 90 bp TGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTaGAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGA +
Preference number: 1 (lower is better)
Translates to: CKRSCVQWDTSDTSC*KCDDLTSGLVFQSG
Trigger: TCCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR GCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTaGTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCT +
Preference number: 1 (lower is better)
Translates to: ACKRSCVQWDTSDTS*CKCDDLTSGLVFQS
Trigger: AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR CCA 90 bp CTGCATGCCATCCATGATGAGAGAAAGGCAATGAATCCTGCTATGTaGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGAC +
Preference number: 1 (lower is better)
Translates to: LHAIHDERKAMNPAM*HAKNPVGKVHHQYD
Trigger: GTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCAGGATTCATTGCCTTTCTCTCATCATGGATGGCATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR GCA 90 bp CTCTTGTGTAAAAGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTaGATGGTCAATGTCAACACACCAACAAAGGTTCTGGAAGTTCCT +
Preference number: 1 (lower is better)
Translates to: LLCKRNQCPVVPKLV*MVNVNTPTKVLEVP
Trigger: AGGAACTTCCAGAACCTTTGTTGGTGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCTTTTACACAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR CCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTaGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACT +
Preference number: 1 (lower is better)
Translates to: SQESSNVACKRSCVQ*DTSDTSCCKCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR GCA 90 bp TCCCAAATTGCTTCCAAGGGTCTCACATTCACTAGGCCTTATTCTTaGAGGAATGTTCAGTTGTGTAACCAAATTGGTGTTCAATCTAGA +
Preference number: 1 (lower is better)
Translates to: SQIASKGLTFTRPYS*RNVQLCNQIGVQSR
Trigger: TCTAGATTGAACACCAATTTGGTTACACAACTGAACATTCCTGCAAGAATAAGGCCTAGTGAATGTGAGACCCTTGGAAGCAATTTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGCTCCCGGGTTCCAGTaGTCCTCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVAPGFQ*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACTGGAACCCGGGAGC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGCTCCCGGGTTCCAGTaGTCCTCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTAPGFQ*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACTGGAACCCGGGAGC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGCTCCCGGGTTCCAGTaGTCCTCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAAPGFQ*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACTGGAACCCGGGAGC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGCTCCCGGGTTCCAGTaGTCCTCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: CYVACKESSRKGSPSIRPAPGFQ*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACTGGAACCCGGGAGC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGTGTCCAGGCTGGTCTTaGACTCCTGGGTTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKCPGWS*TPGFKQ
Trigger: CTGCTTGAACCCAGGAGTTCAAGACCAGCCTGGACA...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGATGGAGCAGGCCACTaGAGCTTAGCTGATGCTTTA +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQDGAGH*SLADAL
Trigger: TAAAGCATCAGCTAAGCTTCAGTGGCCTGCTCCATC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGTGATCTCAGCTCACTaGAGTCTCTGCTCCCGGGTT +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKVISAH*SLCSRV
Trigger: AACCCGGGAGCAGAGACTGCAGTGAGCTGAGATCAC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGAGCCTCCTGAGTAGCTaGGACTACCACTGCATGCCA +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKSLLSS*DYHCMP
Trigger: TGGCATGCAGTGGTAGTCCCAGCTACTCAGGAGGCT...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATCAGTAGGGAGGGTCTaGGTAGAATTACCCATTGTC +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQSVGRV*VELPIV
Trigger: GACAATGGGTAATTCTACTCAGACCCTCCCTACTGA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGTGGAATGCAGTAGTGTaGTCTCAGCTCACTGCAGTC +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKWNAVV*SQLTAV
Trigger: GACTGCAGTGAGCTGAGATCACACTACTGCATTCCA...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGTGGAATGCAGTAGTGTaGTCTCAGCTCACTGCAGTC +
Preference number: 2 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWWNAVV*SQLTAV
Trigger: GACTGCAGTGAGCTGAGATCACACTACTGCATTCCA...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAGCTGGGACTACCACTaGATGCCACCATGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHASWDYH*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCAGTGGTAGTCCCAGCT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGATGTGTGTGTGTCTTaGTCTGTTGCTCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWDVCVS*SVAQAG
Trigger: TCCAGCCTGAGCAACAGAGCAAGACACACACACATC...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGTGCCCAAATTGGTCTaGATGGTCAATGTCAACACA +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQVPKLV*MVNVNT
Trigger: TGTGTTGACATTGACCATGCAGACCAATTTGGGCAC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTCACTGGCAAGGCCATaGGGCCCCAAATCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVSLARP*GPKSRK
Trigger: TTTCCTGGATTTGGGGCCCCATGGCCTTGCCAGTGA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAGCCTCCTGAGTAGCTaGGACTACCACTGCATGCCA +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVSLLSS*DYHCMP
Trigger: TGGCATGCAGTGGTAGTCCCAGCTACTCAGGAGGCT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGCCACACATATGTCCTaGGCTCCCTCCCTGTCAATG +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVATHMS*APSLSM
Trigger: CATTGACAGGGAGGGAGCCCAGGACATATGTGTGGC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGTCAATGAAGATGTGCTaGGTTTCAGAGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKSMKMC*VSEWWL
Trigger: CAGCCACCACTCTGAAACTCAGCACATCTTCATTGA...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCATGTGTGACCTCGTGTTaGGTGAGGGATGTGCCATGC +
Preference number: 2 (lower is better)
Translates to: CYVACKESSRKGSPSIRPCVTSC*VRDVPC
Trigger: GCATGGCACATCCCTCACTCAACACGAGGTCACACA...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGTGATCTCAGCTCACTaGAGTCTCTGCTCCCGGGTT +
Preference number: 2 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSVISAH*SLCSRV
Trigger: AACCCGGGAGCAGAGACTGCAGTGAGCTGAGATCAC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCTCACTGGCAAGGCCATaGGGCCCCAAATCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHASLARP*GPKSRK
Trigger: TTTCCTGGATTTGGGGCCCCATGGCCTTGCCAGTGA...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAGCCTCCTGAGTAGCTaGGACTACCACTGCATGCCA +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHASLLSS*DYHCMP
Trigger: TGGCATGCAGTGGTAGTCCCAGCTACTCAGGAGGCT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGGAGTCATTAGGGGATaGAGCAGGCCACTGAAGCTT +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVGVIRG*SRPLKL
Trigger: AAGCTTCAGTGGCCTGCTCCATCCCCTAATGACTCC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACACAAGTCAAGATGTTaGAACTTGATGATATCCTGC +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQHKSRC*NLMISC
Trigger: GCAGGATATCATCAAGTTTCAACATCTTGACTTGTG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACTGTTGTTTTCCCATTaGTCTGATACTGTAGGCTTA +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQLLFSH*SDTVGL
Trigger: TAAGCCTACAGTATCAGATCAATGGGAAAACAACAG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGATGGAGCAGGCCACTaGAGCTTAGCTGATGCTTTA +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIDGAGH*SLADAL
Trigger: TAAAGCATCAGCTAAGCTTCAGTGGCCTGCTCCATC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGATGAGAGAAAGGCAATaGATCCTGCTATGTGGCATG +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKMRERQ*ILLCGM
Trigger: CATGCCACATAGCAGGATTCATTGCCTTTCTCTCAT...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAAGCCTTCTGGTCAATaGGCCACACATATGTCCTGG +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVKPSGQ*ATHMSW
Trigger: CCAGGACATATGTGTGGCTCATTGACCAGAAGGCTT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGTGTTTAGTAAGAGCTaGACTTCGGCTGAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQVFSKS*TSAEVF
Trigger: AAAAACTTCAGCCGAAGTTCAGCTCTTACTAAACAC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATGTCCAACCCATAGGTaGCCATTAAATGTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQCPTHR*PLNVCV
Trigger: TACACAAACATTTAATGGGCACCTATGGGTTGGACA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGTGCCCAAATTGGTCTaGATGGTCAATGTCAACACA +
Preference number: 2 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWVPKLV*MVNVNT
Trigger: TGTGTTGACATTGACCATGCAGACCAATTTGGGCAC...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGATCAATGTCCAGTTGTaGCCAAATTGGTCTGCATGG +
Preference number: 2 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWINVQL*PNWSAW
Trigger: CCATGCAGACCAATTTGGGCACAACTGGACATTGAT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGGAGTCATTAGGGGATaGAGCAGGCCACTGAAGCTT +
Preference number: 2 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSGVIRG*SRPLKL
Trigger: AAGCTTCAGTGGCCTGCTCCATCCCCTAATGACTCC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGTTTTCCCATTGATCTaGTACTGTAGGCTTAAGAAA +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQVFPLI*YCRLKK
Trigger: TTTCTTAAGCCTACAGTATCAGATCAATGGGAAAAC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACCACTGAAGCTTAGCTaGTGCTTTACTAATAGAAAA +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQPLKLS*CFTNRK
Trigger: TTTTCTATTAGTAAAGCATCAGCTAAGCTTCAGTGG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTCAGTAGGGAGGGTCTaGGTAGAATTACCCATTGTC +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVSVGRV*VELPIV
Trigger: GACAATGGGTAATTCTACTCAGACCCTCCCTACTGA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACAAATCCAGGAAACCTaGATTTTTAACCCAGCTTTA +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQQIQET*IFNPAL
Trigger: TAAAGCTGGGTTAAAAATGCAGGTTTCCTGGATTTG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGATGTGTGTGTGTCTTaGTCTGTTGCTCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTDVCVS*SVAQAG
Trigger: TCCAGCCTGAGCAACAGAGCAAGACACACACACATC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATACTTGGGTGCTGCTaGATGCCATCCATGATGAGA +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIILGCC*MPSMMR
Trigger: TCTCATCATGGATGGCATGCAGCAGCACCCAAGTAT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAGAATACTTGGGTGCTaGTGCATGCCATCCATGATG +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIRILGC*CMPSMM
Trigger: CATCATGGATGGCATGCAGCAGCACCCAAGTATTCT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGCTATGCTGTAGTTACTaGTTTGGTAAGGTTTGCCTC +
Preference number: 2 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWLCCSY*FGKVCL
Trigger: GAGGCAAACCTTACCAAAGCAGTAACTACAGCATAG...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVTRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp ACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGAGGTTGTTTGTGCAAGTaGACAAAGAACCCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: TSCCKCDDLTSGLVFQSGGCLCK*TKNPPK
Trigger: CTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACC...TCCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR TCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGCACAAGTCAAGATGTTaGAACTTGATGATATCCTGC +
Preference number: 2 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWHKSRC*NLMISC
Trigger: GCAGGATATCATCAAGTTTCAACATCTTGACTTGTG...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTGTAAGAGCTGCAGTTaGGTGCAGTTGTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVCKSCS*VQLSSN
Trigger: ATTGCTTGACAACTGCACTCAACTGCAGCTCTTACA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGTTGATCTAATTCTTTaGATGGTGACTTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKVDLIL*MVTSWS
Trigger: ACTCCAGGAAGTCACCATTCAAAGAATTAGATCAAC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACAATATCTTGCCCCATaGTTCATATTTAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIQYLAP*FIFRAG
Trigger: CCCAGCCCTAAATATGAATCATGGGGCAAGATATTG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGGCAAATGTGATGATTTaGCTTCAGGCCTGGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LLTSQESSNVACKRSCVQANVMI*LQAWSS
Trigger: GGAAGACCAGGCCTGAAGTCAAATCATCACATTTGC...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
3UTR-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAATGTTGAGTAAGCGATaGGCGTCGACTAAAGGCTTC +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTMLSKR*ASTKGF
Trigger: GAAGCCTTTAGTCGACGCTCATCGCTTACTCAACAT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACATTGCTCAGGCTGGAATaGAGTAGTGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTLLRLE*SSVISA
Trigger: AGCTGAGATCACACTACTGCATTCCAGCCTGAGCAA...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTTTGCTCAGGCTGGAATaGAGTAGTGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSLLRLE*SSVISA
Trigger: AGCTGAGATCACACTACTGCATTCCAGCCTGAGCAA...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGTGCCCAAATTGGTCTaGATGGTCAATGTCAACACA +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIVPKLV*MVNVNT
Trigger: TGTGTTGACATTGACCATGCAGACCAATTTGGGCAC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGTGCCCAAATTGGTCTaGATGGTCAATGTCAACACA +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVVPKLV*MVNVNT
Trigger: TGTGTTGACATTGACCATGCAGACCAATTTGGGCAC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAAGAATACTTGGGTGCTaGTGCATGCCATCCATGATG +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTRILGC*CMPSMM
Trigger: CATCATGGATGGCATGCAGCAGCACCCAAGTATTCT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCCTGGGTATCCATAAGTaGATGGTTCATGGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHALGIHK*MVHGCW
Trigger: CCAACAGCCATGAACCATGCACTTATGGATACCCAG...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGACCACTTCACATCTTTaGCTTTCAGTCTTCATCTGT +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKTTSHL*LSVFIC
Trigger: ACAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGT...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGACCACTTCACATCTTTaGCTTTCAGTCTTCATCTGT +
Preference number: 2 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWTTSHL*LSVFIC
Trigger: ACAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAACAAGGCAAAATTTATaGCAATGGGCAATTAGACTT +
Preference number: 2 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQTRQNL*QWAIRL
Trigger: AAGTCTAATTGCCCATTGCCATAAATTTTGCCTTGT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAGAATGAAGAATACTTaGGTGCTGCTGCATGCCATC +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIRMKNT*VLLHAI
Trigger: GATGGCATGCAGCAGCACCCAAGTATTCTTCATTCT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAGAATGAAGAATACTTaGGTGCTGCTGCATGCCATC +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVRMKNT*VLLHAI
Trigger: GATGGCATGCAGCAGCACCCAAGTATTCTTCATTCT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTTRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSTRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGGGGCAGCACTCAGTTaGTTACAATTCATGCCATTC +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAGAALS*LQFMPF
Trigger: GAATGGCATGAATTGTAACCAACTGAGTGCTGCCCC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGTAGCCCTAAAAGGCTaGGTATCCATAAGTGCATGG +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAVALKG*VSISAW
Trigger: CCATGCACTTATGGATACCCAGCCTTTTAGGGCTAC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGCCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 2 (lower is better)
Translates to: LLTSQESSNVACKRSCVQPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
3UTR-3UTR CCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCTGTTGCCTGTCTAACTaGCTGCTAACATCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVCCLSN*LLTSQE
Trigger: CTCCTGGGATGTTAGCAGCCAGTTAGACAGGCAACA...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR CAA 90 bp AGGCAGCTCTTGTGTAAAAGGAATCAATGTCCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTCAACACACCAACAAAGGTTCTGGAA +
Preference number: 2 (lower is better)
Translates to: RQLLCKRNQCPVVPK*VCMVNVNTPTKVLE
Trigger: TTCCAGAACCTTTGTTGGTGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCTTTTACACAAGAGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR CAA 90 bp CTATCTTTGGGAGGCAGCTCTTGTGTAAAAGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACACCAACAA +
Preference number: 2 (lower is better)
Translates to: LSLGGSSCVKGINVQ*CPNWSAWSMSTHQQ
Trigger: TTGTTGGTGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACATGTAAGAGCTGCAGTTaGGTGCAGTTGTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTCKSCS*VQLSSN
Trigger: ATTGCTTGACAACTGCACTCAACTGCAGCTCTTACA...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGTTTTCCCATTGATCTaGTACTGTAGGCTTAAGAAA +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKVFPLI*YCRLKK
Trigger: TTTCTTAAGCCTACAGTATCAGATCAATGGGAAAAC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTCAATATCTTGCCCCATaGTTCATATTTAGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSQYLAP*FIFRAG
Trigger: CCCAGCCCTAAATATGAATCATGGGGCAAGATATTG...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTATGAGAGAAAGGCAATaGATCCTGCTATGTGGCATG +
Preference number: 2 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSMRERQ*ILLCGM
Trigger: CATGCCACATAGCAGGATTCATTGCCTTTCTCTCAT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAATGAGAGAAAGGCAATaGATCCTGCTATGTGGCATG +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTMRERQ*ILLCGM
Trigger: CATGCCACATAGCAGGATTCATTGCCTTTCTCTCAT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACACACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCCACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCAGCTGGGACTACCACTaGATGCCACCATGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSSWDYH*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCAGTGGTAGTCCCAGCT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCCAAATTGGTCTGCATaGTCAATGTCAACACACCAA +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVPNWSA*SMSTHQ
Trigger: TTGGTGTGTTGACATTGACCATGCAGACCAATTTGG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACCAAATTGGTCTGCATaGTCAATGTCAACACACCAA +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIPNWSA*SMSTHQ
Trigger: TTGGTGTGTTGACATTGACCATGCAGACCAATTTGG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAGAATGAAGAATACTTaGGTGCTGCTGCATGCCATC +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHARMKNT*VLLHAI
Trigger: GATGGCATGCAGCAGCACCCAAGTATTCTTCATTCT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGTATCCATAAGTGCATaGTTCATGGCTGTTGGGACT +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAVSISA*FMAVGT
Trigger: AGTCCCAACAGCCATGAACCATGCACTTATGGATAC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAGATCATGTGTGCAGTaGGATACTTCTGATACATCC +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVRSCVQ*DTSDTS
Trigger: GGATGTATCAGAAGTATCCCACTGCACACATGATCT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGTTGATCTAATTCTTTaGATGGTGACTTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIVDLIL*MVTSWS
Trigger: ACTCCAGGAAGTCACCATTCAAAGAATTAGATCAAC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACTGTTGTTTTCCCATTaGTCTGATACTGTAGGCTTA +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSILLFSH*SDTVGL
Trigger: TAAGCCTACAGTATCAGATCAATGGGAAAACAACAG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGTAAAGTCTGTAATGTaGCTAAAGTCTTCCCCACAG +
Preference number: 2 (lower is better)
Translates to: CYVACKESSRKGSPSIRPVKSVM*LKSSPQ
Trigger: CTGTGGGGAAGACTTTAGTCACATTACAGACTTTAC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAGAGCTGCAGTTGAGTaGAGTTGTCAAGCAATTTTT +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVRAAVE*SCQAIF
Trigger: AAAAATTGCTTGACAACTGCACTCAACTGCAGCTCT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAGAGCTGCAGTTGAGTaGAGTTGTCAAGCAATTTTT +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIRAAVE*SCQAIF
Trigger: AAAAATTGCTTGACAACTGCACTCAACTGCAGCTCT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATATGTCCAACCCATAGGTaGCCATTAAATGTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSICPTHR*PLNVCV
Trigger: TACACAAACATTTAATGGGCACCTATGGGTTGGACA...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAAAGGCAATGAATCCTaGTATGTGGCATGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVKGNES*YVACKE
Trigger: TTCTTTGCATGCCACATAGCAGGATTCATTGCCTTT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAGATTTGGTTGTTTGTaGAAGTGGACAAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIRFGCL*KWTKNP
Trigger: AGGGTTCTTTGTCCACTTGCACAAACAACCAAATCT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGACAAGGCAAAATTTATaGCAATGGGCAATTAGACTT +
Preference number: 2 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKTRQNL*QWAIRL
Trigger: AAGTCTAATTGCCCATTGCCATAAATTTTGCCTTGT...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTATGAATCCTGCTATGTaGCATGCAAAGAATCCAGTA +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVMNPAM*HAKNPV
Trigger: TACTGGATTCTTTGCATGCCACATAGCAGGATTCAT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGCCACACATATGTCCTaGGCTCCCTCCCTGTCAATG +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSATHMS*APSLSM
Trigger: CATTGACAGGGAGGGAGCCCAGGACATATGTGTGGC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCCCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 2 (lower is better)
Translates to: SNVACKRSCVQWDTSDTSPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...GGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGTAATTATTTTCTTCTaGGTGGATGCCTCTGATCCC +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAVIIFF*VDASDP
Trigger: GGGATCAGAGGCATCCACCCAGAAGAAAATAATTAC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR CAA 90 bp TGGCTTGGAAACTTGATATCCTGCTCATGGGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACAAGT +
Preference number: 2 (lower is better)
Translates to: WLGNLISCSWVNTQD*VVCASGQRTLLRTS
Trigger: ACTTGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCATGAGCAGGATATCAAGTTTCCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGTTGATCTAATTCTTTaGATGGTGACTTCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: CYVACKESSRKGSPSIRPVDLIL*MVTSWS
Trigger: ACTCCAGGAAGTCACCATTCAAAGAATTAGATCAAC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAAGTGGTTGGGCTAGTTaGTCTAATTCTTTGAATGGT +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTSGWAS*SNSLNG
Trigger: ACCATTCAAAGAATTAGATCAACTAGCCCAACCACT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAGTGGTTGGGCTAGTTaGTCTAATTCTTTGAATGGT +
Preference number: 2 (lower is better)
Translates to: CYVACKESSRKGSPSIRPSGWAS*SNSLNG
Trigger: ACCATTCAAAGAATTAGATCAACTAGCCCAACCACT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTCTGTTGTTTTCCCATTaGTCTGATACTGTAGGCTTA +
Preference number: 2 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSLLFSH*SDTVGL
Trigger: TAAGCCTACAGTATCAGATCAATGGGAAAACAACAG...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAGAGCTGCAGTTGAGTaGAGTTGTCAAGCAATTTTT +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHARAAVE*SCQAIF
Trigger: AAAAATTGCTTGACAACTGCACTCAACTGCAGCTCT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCTGTCCAACCCATAGGTaGCCATTAAATGTTTGTGTA +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHACPTHR*PLNVCV
Trigger: TACACAAACATTTAATGGGCACCTATGGGTTGGACA...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAAAGGCAATGAATCCTaGTATGTGGCATGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAKGNES*YVACKE
Trigger: TTCTTTGCATGCCACATAGCAGGATTCATTGCCTTT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGAGATTTGGTTGTTTGTaGAAGTGGACAAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: VRDHVCSGILLIHPAANVRFGCL*KWTKNP
Trigger: AGGGTTCTTTGTCCACTTGCACAAACAACCAAATCT...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR GCA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGAGATTTGGTTGTTTGTaGAAGTGGACAAAGAACCCT +
Preference number: 2 (lower is better)
Translates to: LLTSQESSNVACKRSCVQRFGCL*KWTKNP
Trigger: AGGGTTCTTTGTCCACTTGCACAAACAACCAAATCT...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
3UTR-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 2 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVSDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR CCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGGCTGTATCATACTGTaGAAACCACTTCACATCTTT +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTGCIIL*KPLHIF
Trigger: AAAGATGTGAAGTGGTTTCCACAGTATGATACAGCC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGAAAGTGCTTTTTCATaGGCATGCCATAAAAAGTAC +
Preference number: 2 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIESAFS*ACHKKY
Trigger: GTACTTTTTATGGCATGCCCATGAAAAAGCACTTTC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCGGTTGTTTGTGCAAGTaGACAAAGAACCCTCCTAAG +
Preference number: 2 (lower is better)
Translates to: SNVACKRSCVQWDTSDTSGCLCK*TKNPPK
Trigger: CTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACC...GGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 2 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR CCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGTTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 2 (lower is better)
Translates to: VRDHVCSGILLIHPAANVFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR CCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 2 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR CAA 90 bp TGGAATAAATGTTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTTaGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: WNKCSRVVKNLILTV*SVFAWLVRGRELLE
Trigger: CTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTGGAACATTTATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
3UTR-3UTR TCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCCACAAGTCAAGATGTTaGAACTTGATGATATCCTGC +
Preference number: 2 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVHKSRC*NLMISC
Trigger: GCAGGATATCATCAAGTTTCAACATCTTGACTTGTG...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGTTTTCCCATTGATCTaGTACTGTAGGCTTAAGAAA +
Preference number: 2 (lower is better)
Translates to: CYVACKESSRKGSPSIRPVFPLI*YCRLKK
Trigger: TTTCTTAAGCCTACAGTATCAGATCAATGGGAAAAC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGATGGAGCAGGCCACTaGAGCTTAGCTGATGCTTTA +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSDGAGH*SLADAL
Trigger: TAAAGCATCAGCTAAGCTTCAGTGGCCTGCTCCATC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACACAAATCCAGGAAACCTaGATTTTTAACCCAGCTTTA +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTQIQET*IFNPAL
Trigger: TAAAGCTGGGTTAAAAATGCAGGTTTCCTGGATTTG...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCATGATGTTACAAGGATaGATTTCACGTAGCCCTAAA +
Preference number: 2 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAMMLQG*ISRSPK
Trigger: TTTAGGGCTACGTGAAATGCATCCTTGTAACATCAT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGGGAAACTTGATATCCTaGTCATGGGTAAATACACAA +
Preference number: 2 (lower is better)
Translates to: VRDHVCSGILLIHPAANVGNLIS*SWVNTQ
Trigger: TTGTGTATTTACCCATGAGCAGGATATCAAGTTTCC...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR GCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAAGGAAACTTGATATCCTaGTCATGGGTAAATACACAA +
Preference number: 2 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKGNLIS*SWVNTQ
Trigger: TTGTGTATTTACCCATGAGCAGGATATCAAGTTTCC...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR GCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 2 (lower is better)
Translates to: SQESSNVACKRSCVQWDTSDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CCA 90 bp AGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTAGGGGCAGAGAACTTCTaGAGGTCCTTACTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: RVVKNLILTVLSVFAWLVGAENF*RSLLSH
Trigger: ATGGCTAAGTAAGGACCTCCAGAAGTTCTCTGCCCC...TACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
3UTR-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCATACTTGGGTGCTGCTaGATGCCATCCATGATGAGA +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSILGCC*MPSMMR
Trigger: TCTCATCATGGATGGCATGCAGCAGCACCCAAGTAT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAACAAGGCAAAATTTATaGCAATGGGCAATTAGACTT +
Preference number: 2 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTTRQNL*QWAIRL
Trigger: AAGTCTAATTGCCCATTGCCATAAATTTTGCCTTGT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSTRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGTAGCCCTAAAAGGCTaGGTATCCATAAGTGCATGG +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSVALKG*VSISAW
Trigger: CCATGCACTTATGGATACCCAGCCTTTTAGGGCTAC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTTGATATCCTGCTCATaGGTAAATACACAAGATTTG +
Preference number: 2 (lower is better)
Translates to: SQESSNVACKRSCVQWDTLISCS*VNTQDL
Trigger: CAAATCTTGTGTATTTACCCATGAGCAGGATATCAA...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGTTGATATCCTGCTCATaGGTAAATACACAAGATTTG +
Preference number: 2 (lower is better)
Translates to: VRDHVCSGILLIHPAANVLISCS*VNTQDL
Trigger: CAAATCTTGTGTATTTACCCATGAGCAGGATATCAA...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR CCA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTTGATATCCTGCTCATaGGTAAATACACAAGATTTG +
Preference number: 2 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTLISCS*VNTQDL
Trigger: CAAATCTTGTGTATTTACCCATGAGCAGGATATCAA...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR GCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAGGAAACTTGATATCCTaGTCATGGGTAAATACACAA +
Preference number: 2 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTGNLIS*SWVNTQ
Trigger: TTGTGTATTTACCCATGAGCAGGATATCAAGTTTCC...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCAAAGGCAATGAATCCTaGTATGTGGCATGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSKGNES*YVACKE
Trigger: TTCTTTGCATGCCACATAGCAGGATTCATTGCCTTT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCCCACTGAAGCTTAGCTaGTGCTTTACTAATAGAAAA +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSPLKLS*CFTNRK
Trigger: TTTTCTATTAGTAAAGCATCAGCTAAGCTTCAGTGG...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGAAAGTGCTTTTTCATaGGCATGCCATAAAAAGTAC +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSESAFS*ACHKKY
Trigger: GTACTTTTTATGGCATGCCCATGAAAAAGCACTTTC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCTTGAATATTCCATTTTaGATCACAGAGGAGAGACTA +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSLNIPF*ITEERL
Trigger: TAGTCTCTCCTCTGTGATGCAAAATGGAATATTCAA...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCACAAGGCAAAATTTATaGCAATGGGCAATTAGACTT +
Preference number: 2 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSTRQNL*QWAIRL
Trigger: AAGTCTAATTGCCCATTGCCATAAATTTTGCCTTGT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR TCA 72 bp ATGTCCTGGGCTCCCTCCCTGTCAATGAAGATGTGCTaGGTTTCAGAGTGGTGGCTGGATCTAGGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: MSWAPSLSMKMC*VSEWWLDLGQA
Trigger: TGCTTGGCCTAGATCCAGCCACCACTCTGAAACTCAGCACATCTTCATTGACAGGGAGGGAGCCCAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGGGGGCAGCACTCAGTaGGTTACAATTCATGCCATT +
Preference number: 3 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQGGSTQ*VTIHAI
Trigger: AATGGCATGAATTGTAACCAACTGAGTGCTGCCCCC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGGGGGCAGCACTCAGTaGGTTACAATTCATGCCATT +
Preference number: 3 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKGGSTQ*VTIHAI
Trigger: AATGGCATGAATTGTAACCAACTGAGTGCTGCCCCC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR CCA 72 bp CACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATaGTTCATGGCTGTTGGGACTAAGAAAGCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: HVALKGWVSISA*FMAVGTKKAFW
Trigger: CCAGAAGGCTTTCTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAAACCACTTCACATCTTaGGCTTTCAGTCTTCATCTG +
Preference number: 3 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQNHFTS*AFSLHL
Trigger: CAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGTT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCA +
Preference number: 3 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKGINVQ*CPNWSA
Trigger: TGCAGACCAATTTGGGCACAACTGGACATTGATTCC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGT +
Preference number: 3 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQFGRQL*CKRNQC
Trigger: ACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTC +
Preference number: 3 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIPVVPK*VCMVNV
Trigger: GACATTGACCATGCAGACCAATTTGGGCACAACTGG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGAAGAATGAAGAATACTaGGGTGCTGCTGCATGCCAT +
Preference number: 3 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWKNEEY*GAAACH
Trigger: ATGGCATGCAGCAGCACCCAAGTATTCTTCATTCTT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGGGGGCAGCACTCAGTaGGTTACAATTCATGCCATT +
Preference number: 3 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVGGSTQ*VTIHAI
Trigger: AATGGCATGAATTGTAACCAACTGAGTGCTGCCCCC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGAAAAAGCTGTTGACATaGGGGGTCACAAGTCAAGAT +
Preference number: 3 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWKKLLT*GVTSQD
Trigger: ATCTTGACTTGTGACCCCCAATGTCAACAGCTTTTT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGAACCACTTCACATCTTaGGCTTTCAGTCTTCATCTG +
Preference number: 3 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKNHFTS*AFSLHL
Trigger: CAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGTT...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCCCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTC +
Preference number: 3 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAPVVPK*VCMVNV
Trigger: GACATTGACCATGCAGACCAATTTGGGCACAACTGG...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACACCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTC +
Preference number: 3 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTPVVPK*VCMVNV
Trigger: GACATTGACCATGCAGACCAATTTGGGCACAACTGG...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCA +
Preference number: 3 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIGINVQ*CPNWSA
Trigger: TGCAGACCAATTTGGGCACAACTGGACATTGATTCC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAATTGAATATTCCATTTaGCATCACAGAGGAGAGACT +
Preference number: 3 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQIEYSI*HHRGET
Trigger: AGTCTCTCCTCTGTGATGCAAAATGGAATATTCAAT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGCATAAACAAGGTGTTTaGGATGGTCAGCATCTCAGA +
Preference number: 3 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWHKQGV*DGQHLR
Trigger: TCTGAGATGCTGACCATCCAAAACACCTTGTTTATG...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR TCA 72 bp AGCCCATGGGAGTCATTAGGGGATGGAGCAGGCCACTaGAGCTTAGCTGATGCTTTACTAATAGAAAAGCAT +
Preference number: 3 (lower is better)
Translates to: SPWESLGDGAGH*SLADALLIEKH
Trigger: ATGCTTTTCTATTAGTAAAGCATCAGCTAAGCTTCAGTGGCCTGCTCCATCCCCTAATGACTCCCATGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCA +
Preference number: 3 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSGINVQ*CPNWSA
Trigger: TGCAGACCAATTTGGGCACAACTGGACATTGATTCC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR TCA 72 bp CCTGACAGGCATCCTAGCCAATCAGTAGGGAGGGTCTaGGTAGAATTACCCATTGTCAAACTATGTATCAGA +
Preference number: 3 (lower is better)
Translates to: PDRHPSQSVGRV*VELPIVKLCIR
Trigger: TCTGATACATAGTTTGACAATGGGTAATTCTACTCAGACCCTCCCTACTGATTGGCTAGGATGCCTGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR GCA 72 bp GGCAGCTCTTGTGTAAAAGGAATCAATGTCCAGTTGTaGCCAAATTGGTCTGCATGGTCAATGTCAACACAC +
Preference number: 3 (lower is better)
Translates to: GSSCVKGINVQL*PNWSAWSMSTH
Trigger: GTGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCTTTTACACAAGAGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR GCA 72 bp TCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTaGAAATGTGATGATTTGACTTCAGGCCTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: SCVQWDTSDTSC*KCDDLTSGLVF
Trigger: GAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR GCA 72 bp AGATCATGTGTGCAGTGGGATACTTCTGATACATCCTaGTGCAAATGTGATGATTTGACTTCAGGCCTGGTC +
Preference number: 3 (lower is better)
Translates to: RSCVQWDTSDTS*CKCDDLTSGLV
Trigger: GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAAAAAGCTGTTGACATaGGGGGTCACAAGTCAAGAT +
Preference number: 3 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVKKLLT*GVTSQD
Trigger: ATCTTGACTTGTGACCCCCAATGTCAACAGCTTTTT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAAGAATGAAGAATACTaGGGTGCTGCTGCATGCCAT +
Preference number: 3 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAKNEEY*GAAACH
Trigger: ATGGCATGCAGCAGCACCCAAGTATTCTTCATTCTT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGATTGAATATTCCATTTaGCATCACAGAGGAGAGACT +
Preference number: 3 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKIEYSI*HHRGET
Trigger: AGTCTCTCCTCTGTGATGCAAAATGGAATATTCAAT...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAGGGCAGATCTGCCATaGAATATTCCATTTTGCATC +
Preference number: 3 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIRADLP*NIPFCI
Trigger: GATGCAAAATGGAATATTCAATGGCAGATCTGCCCT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACATAAACAAGGTGTTTaGGATGGTCAGCATCTCAGA +
Preference number: 3 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIHKQGV*DGQHLR
Trigger: TCTGAGATGCTGACCATCCAAAACACCTTGTTTATG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGATACACAAGATTTGGTaGTTTGTGCAAGTGGACAAA +
Preference number: 3 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWIHKIW*FVQVDK
Trigger: TTTGTCCACTTGCACAAACAACCAAATCTTGTGTAT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR CAA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAAAAAGCTGTTGACATaGGGGGTCACAAGTCAAGAT +
Preference number: 3 (lower is better)
Translates to: CYVACKESSRKGSPSIRPKKLLT*GVTSQD
Trigger: ATCTTGACTTGTGACCCCCAATGTCAACAGCTTTTT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTTTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGT +
Preference number: 3 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSFGRQL*CKRNQC
Trigger: ACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAA...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTAGGGCAGATCTGCCATaGAATATTCCATTTTGCATC +
Preference number: 3 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSRADLP*NIPFCI
Trigger: GATGCAAAATGGAATATTCAATGGCAGATCTGCCCT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAGGGCAGATCTGCCATaGAATATTCCATTTTGCATC +
Preference number: 3 (lower is better)
Translates to: FINFRNSGGSTQLVTIHARADLP*NIPFCI
Trigger: GATGCAAAATGGAATATTCAATGGCAGATCTGCCCT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTACAAGATTTGGTTGTTaGTGCAAGTGGACAAAGAAC +
Preference number: 3 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSTRFGC*CKWTKN
Trigger: GTTCTTTGTCCACTTGCACAAACAACCAAATCTTGT...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR GCA 72 bp GCTTCCAAGGGTCTCACATTCACTAGGCCTTATTCTTaGAGGAATGTTCAGTTGTGTAACCAAATTGGTGTT +
Preference number: 3 (lower is better)
Translates to: ASKGLTFTRPYS*RNVQLCNQIGV
Trigger: AACACCAATTTGGTTACACAACTGAACATTCCTGCAAGAATAAGGCCTAGTGAATGTGAGACCCTTGGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR CAA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGACAAGATTTGGTTGTTaGTGCAAGTGGACAAAGAAC +
Preference number: 3 (lower is better)
Translates to: VRDHVCSGILLIHPAANVTRFGC*CKWTKN
Trigger: GTTCTTTGTCCACTTGCACAAACAACCAAATCTTGT...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR CAA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGA +
Preference number: 3 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSVNTQD*VVCASG
Trigger: TCCACTTGCACAAACAACCAAATCTTGTGTATTTAC...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR CCA 72 bp AGGCTGTATCATACTGTGGAAACCACTTCACATCTTTaGCTTTCAGTCTTCATCTGTACAATGAAGTGGTTG +
Preference number: 3 (lower is better)
Translates to: RLYHTVETTSHL*LSVFICTMKWL
Trigger: CAACCACTTCATTGTACAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAATTGAATATTCCATTTaGCATCACAGAGGAGAGACT +
Preference number: 3 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTIEYSI*HHRGET
Trigger: AGTCTCTCCTCTGTGATGCAAAATGGAATATTCAAT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGATACACAAGATTTGGTaGTTTGTGCAAGTGGACAAA +
Preference number: 3 (lower is better)
Translates to: LLTSQESSNVACKRSCVQIHKIW*FVQVDK
Trigger: TTTGTCCACTTGCACAAACAACCAAATCTTGTGTAT...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
3UTR-3UTR CAA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATACACAAGATTTGGTaGTTTGTGCAAGTGGACAAA +
Preference number: 3 (lower is better)
Translates to: VRDHVCSGILLIHPAANVIHKIW*FVQVDK
Trigger: TTTGTCCACTTGCACAAACAACCAAATCTTGTGTAT...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR-3UTR CAA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGA +
Preference number: 3 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSVNTQD*VVCASG
Trigger: TCCACTTGCACAAACAACCAAATCTTGTGTATTTAC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564558.5
3UTR-3UTR CAA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATGCAAATGTGATGATTaGACTTCAGGCCTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTCKCDD*TSGLVF
Trigger: GAAGACCAGGCCTGAAGTCAAATCATCACATTTGCA...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CAA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCCATGGTTCATGGCTGTaGGGACTAAGAAAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSHGSWL*GLRKPS
Trigger: AGAAGGCTTTCTTAGTCCCAACAGCCATGAACCATG...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCACAAGATTTGGTTGTTaGTGCAAGTGGACAAAGAAC +
Preference number: 3 (lower is better)
Translates to: SNVACKRSCVQWDTSDTSTRFGC*CKWTKN
Trigger: GTTCTTTGTCCACTTGCACAAACAACCAAATCTTGT...GGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CAA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGA +
Preference number: 3 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSVNTQD*VVCASG
Trigger: TCCACTTGCACAAACAACCAAATCTTGTGTATTTAC...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
3UTR CCA 72 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTaGGATACTTCTGATACATCCTGCTGCAAATGTGAT +
Preference number: 3 (lower is better)
Translates to: SSNVACKRSCVQ*DTSDTSCCKCD
Trigger: ATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CAA 90 bp TCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGA +
Preference number: 3 (lower is better)
Translates to: SNVACKRSCVQWDTSDTSVNTQD*VVCASG
Trigger: TCCACTTGCACAAACAACCAAATCTTGTGTATTTAC...GGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR-3UTR CAA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCTTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGT +
Preference number: 3 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSFGRQL*CKRNQC
Trigger: ACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAA...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR-3UTR CAA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAATACACAAGATTTGGTaGTTTGTGCAAGTGGACAAA +
Preference number: 3 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTIHKIW*FVQVDK
Trigger: TTTGTCCACTTGCACAAACAACCAAATCTTGTGTAT...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
3UTR TCA 72 bp AAAGCTGTTGACATTGGGGGTCACAAGTCAAGATGTTaGAACTTGATGATATCCTGCATACATATATTCAAA +
Preference number: 3 (lower is better)
Translates to: KAVDIGGHKSRC*NLMISCIHIFK
Trigger: TTTGAATATATGTATGCAGGATATCATCAAGTTTCAACATCTTGACTTGTGACCCCCAATGTCAACAGCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACCTCGGGGCCATTCCTaGCTCGCCAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQPRGHS*LARARL
Trigger: GAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAACCGGGGTCGGACAATaGCCGCAGCGGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQTGVGQ*PQRWGR
Trigger: TCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGATCTGCGGAGGGGCTaGCCAAAGGGGCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKDLRRG*PKGPQP
Trigger: CGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGGTCCGATCTGCGGAGGGGCTaGCCAAAGGGGCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: QFCQYLHGLYGAENFWRSDLRRG*PKGPQP
Trigger: CGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATC...GGACCTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611381.4
CDS-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAAATGTCACTGATTCCTaGGGCGCGGCGGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQNVTDS*GAAVGG
Trigger: GCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCCCTCGGGGCCATTCCTaGCTCGCCAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAPRGHS*LARARL
Trigger: GAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGG...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGAATGTCACTGATTCCTaGGGCGCGGCGGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWNVTDS*GAAVGG
Trigger: GCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGGGCAGGAGCGCCTCTaGGGGGCTCCGGATTTCGCG +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAGQERL*GAPDFA
Trigger: CGCGAAATCCGGAGCCCCCCAGAGGCGCTCCTGCCC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAATCTTTGAATGTCACTaGTTCCTGGGGCGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQIFECH*FLGRGG
Trigger: ACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGAT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATGTCCAGGCTGGTCTTaGACTCCTGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQCPGWS*TPGFKQ
Trigger: CTGCTTGAACCCAGGAGTTCAAGACCAGCCTGGACA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCCCTCGGGGCCATTCCTaGCTCGCCAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SNVACKRSCVQWDTSDTSPRGHS*LARARL
Trigger: GAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGG...GGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
CDS-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGATCTGCGGAGGGGCTaGCCAAAGGGGCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSDLRRG*PKGPQP
Trigger: CGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGATCTGCGGAGGGGCTaGCCAAAGGGGCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPDLRRG*PKGPQP
Trigger: CGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCGATCTGCGGAGGGGCTaGCCAAAGGGGCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVDLRRG*PKGPQP
Trigger: CGGCTGAGGCCCCTTTGGGCAGCCCCTCCGCAGATC...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTGCTCCCGGGTTCCAGTaGTCCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SQESSNVACKRSCVQWDTAPGFQ*SSHLSL
Trigger: GAGGCTGAGGTGGGAGGATCACTGGAACCCGGGAGC...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGGTTATCTCCAATTCTaGTCTGCGGAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWGYLQF*SAEGLP
Trigger: GGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACC...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACACCTCGGGGCCATTCCTaGCTCGCCAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTPRGHS*LARARL
Trigger: GAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGG...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
CDS-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGGGCAGAACTGGAAGTaGGCCTGCGCACTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTGQNWK*ACALGA
Trigger: GGCTCCGAGTGCGCAGGCGCACTTCCAGTTCTGCCC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAATGTCACTGATTCCTaGGGCGCGGCGGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSINVTDS*GAAVGG
Trigger: GCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGGAGTCATTAGGGGATaGAGCAGGCCACTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQGVIRG*SRPLKL
Trigger: AAGCTTCAGTGGCCTGCTCCATCCCCTAATGACTCC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCACCGGGGTCGGACAATaGCCGCAGCGGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVTGVGQ*PQRWGR
Trigger: TCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGGGGCAGGAGCGCCTCTaGGGGGCTCCGGATTTCGCG +
Preference number: 4 (lower is better)
Translates to: CEKSDSHSFVSICMACTGGQERL*GAPDFA
Trigger: CGCGAAATCCGGAGCCCCCCAGAGGCGCTCCTGCCC...CCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000611381.4
CDS-3UTR CCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTGCGGTGGGGCAGAACTaGAAGTGCGCCTGCGCACTC +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCAVGQN*KCACAL
Trigger: GAGTGCGCAGGCGCACTTCCAGTTCTGCCCCACCGC...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATGGAATGCAGTAGTGTaGTCTCAGCTCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQWNAVV*SQLTAV
Trigger: GACTGCAGTGAGCTGAGATCACACTACTGCATTCCA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAAAATGTCACTGATTCCTaGGGCGCGGCGGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKNVTDS*GAAVGG
Trigger: GCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATT...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGTCACTGGCAAGGCCATaGGGCCCCAAATCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKSLARP*GPKSRK
Trigger: TTTCCTGGATTTGGGGCCCCATGGCCTTGCCAGTGA...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGTCACTGGCAAGGCCATaGGGCCCCAAATCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWSLARP*GPKSRK
Trigger: TTTCCTGGATTTGGGGCCCCATGGCCTTGCCAGTGA...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAACCGGGGTCGGACAATaGCCGCAGCGGTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLTGVGQ*PQRWGR
Trigger: TCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGT...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTCAGAATCACCGCCTCTaGGGGGCTCCGGATTTCGCG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSQNHRL*GAPDFA
Trigger: CGCGAAATCCGGAGCCCCCCAGAGGCGGTGATTCTG...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000563169.7
ENST00000564558.5
CDS-3UTR CCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTCAATGGCCGCAGCGGTaGGGCAGAACTGGAAGTGCG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCQWPQR*GRTGSA
Trigger: CGCACTTCCAGTTCTGCCCCACCGCTGCGGCCATTG...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS-3UTR TCA 90 bp CAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGGTCCCTGTATAAGCTCCTCTaGGCAGGGTCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: QFCQYLHGLYGAENFWRSLYKLL*AGSTWY
Trigger: GTACCATGTCGACCCTGCTCAGAGGAGCTTATACAG...GGACCTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGCAAATGTGATGATTTaGCTTCAGGCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQANVMI*LQAWSS
Trigger: GGAAGACCAGGCCTGAAGTCAAATCATCACATTTGC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAATGTTGAGTAAGCGATaGGCGTCGACTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQMLSKR*ASTKGF
Trigger: GAAGCCTTTAGTCGACGCTCATCGCTTACTCAACAT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGTTATCTCCAATTCTaGTCTGCGGAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSGYLQF*SAEGLP
Trigger: GGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACC...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCCCTCGGGGCCATTCCTaGCTCGCCAGGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSPRGHS*LARARL
Trigger: GAGCCGGGCCCTGGCGAGGCAGGAATGGCCCCGAGG...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATTGCTCAGGCTGGAATaGAGTAGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQLLRLE*SSVISA
Trigger: AGCTGAGATCACACTACTGCATTCCAGCCTGAGCAA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQTRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTCAGAATCACCGCCTCTaGGGGGCTCCGGATTTCGCG +
Preference number: 4 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTQNHRL*GAPDFA
Trigger: CGCGAAATCCGGAGCCCCCCAGAGGCGGTGATTCTG...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000576805.5
CDS-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTATCTTTGAATGTCACTaGTTCCTGGGGCGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVIFECH*FLGRGG
Trigger: ACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGAT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATATGTGTGACCTCGTGTTaGGTGAGGGATGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSICVTSC*VRDVPC
Trigger: GCATGGCACATCCCTCACTCAACACGAGGTCACACA...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATGTAAGAGCTGCAGTTaGGTGCAGTTGTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQCKSCS*VQLSSN
Trigger: ATTGCTTGACAACTGCACTCAACTGCAGCTCTTACA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGATGGAGCAGGCCACTaGAGCTTAGCTGATGCTTTA +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKDGAGH*SLADAL
Trigger: TAAAGCATCAGCTAAGCTTCAGTGGCCTGCTCCATC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGGTTATCTCCAATTCTaGTCTGCGGAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPGYLQF*SAEGLP
Trigger: GGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAAGGTTATCTCCAATTCTaGTCTGCGGAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKGYLQF*SAEGLP
Trigger: GGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACC...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTAGCTGGGACTACCACTaGATGCCACCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSSWDYH*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCAGTGGTAGTCCCAGCT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTCTCCAATTCTGATCTaGGGAGGGGCTGCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVSPILI*GGAAQR
Trigger: CCTTTGGGCAGCCCCTCCGCAGATCAGAATTGGAGA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTTCTCCAATTCTGATCTaGGGAGGGGCTGCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSSPILI*GGAAQR
Trigger: CCTTTGGGCAGCCCCTCCGCAGATCAGAATTGGAGA...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACAAATGTCACTGATTCCTaGGGCGCGGCGGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTNVTDS*GAAVGG
Trigger: GCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATT...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAGCCTCCTGAGTAGCTaGGACTACCACTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSISLLSS*DYHCMP
Trigger: TGGCATGCAGTGGTAGTCCCAGCTACTCAGGAGGCT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGCCACACATATGTCCTaGGCTCCCTCCCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIATHMS*APSLSM
Trigger: CATTGACAGGGAGGGAGCCCAGGACATATGTGTGGC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTACAGAATCACCGCCTCTaGGGGGCTCCGGATTTCGCG +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLQNHRL*GAPDFA
Trigger: CGCGAAATCCGGAGCCCCCCAGAGGCGGTGATTCTG...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000576805.5
CDS-3UTR CCA 90 bp CAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGGTCCGGGGCAGAGAACTTCTaGAGGTCCTTACTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: QFCQYLHGLYGAENFWRSGAENF*RSLLSH
Trigger: ATGGCTAAGTAAGGACCTCCAGAAGTTCTCTGCCCC...GGACCTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR TCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTATCTTTGAATGTCACTaGTTCCTGGGGCGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSIFECH*FLGRGG
Trigger: ACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGAT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAATCTTTGAATGTCACTaGTTCCTGGGGCGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPIFECH*FLGRGG
Trigger: ACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGAT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCTGTATAAGCTCCTCTaGGCAGGGTCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVLYKLL*AGSTWY
Trigger: GTACCATGTCGACCCTGCTCAGAGGAGCTTATACAG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGCAAATGTGATGATTTaGCTTCAGGCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWANVMI*LQAWSS
Trigger: GGAAGACCAGGCCTGAAGTCAAATCATCACATTTGC...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTGTGTGACCTCGTGTTaGGTGAGGGATGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: SQESSNVACKRSCVQWDTCVTSC*VRDVPC
Trigger: GCATGGCACATCCCTCACTCAACACGAGGTCACACA...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCTGTGTGACCTCGTGTTaGGTGAGGGATGTGCCATGC +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHACVTSC*VRDVPC
Trigger: GCATGGCACATCCCTCACTCAACACGAGGTCACACA...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGAGAGTGCTTTCATCTTaGGTGAGAGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKRVLSS*VRDVLC
Trigger: GCACAGCACATCTCTCACTCAAGATGAAAGCACTCT...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGATGTTGAGTAAGCGATaGGCGTCGACTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWMLSKR*ASTKGF
Trigger: GAAGCCTTTAGTCGACGCTCATCGCTTACTCAACAT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCATGTCCAGGCTGGTCTTaGACTCCTGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPCPGWS*TPGFKQ
Trigger: CTGCTTGAACCCAGGAGTTCAAGACCAGCCTGGACA...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACATGTCCAGGCTGGTCTTaGACTCCTGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTCPGWS*TPGFKQ
Trigger: CTGCTTGAACCCAGGAGTTCAAGACCAGCCTGGACA...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTTGTCCAGGCTGGTCTTaGACTCCTGGGTTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCCPGWS*TPGFKQ
Trigger: CTGCTTGAACCCAGGAGTTCAAGACCAGCCTGGACA...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACTATGCTGTAGTTACTaGTTTGGTAAGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQLCCSY*FGKVCL
Trigger: GAGGCAAACCTTACCAAAGCAGTAACTACAGCATAG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTGTGATCTCAGCTCACTaGAGTCTCTGCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCVISAH*SLCSRV
Trigger: AACCCGGGAGCAGAGACTGCAGTGAGCTGAGATCAC...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCGTGATCTCAGCTCACTaGAGTCTCTGCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVVISAH*SLCSRV
Trigger: AACCCGGGAGCAGAGACTGCAGTGAGCTGAGATCAC...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGTGATCTCAGCTCACTaGAGTCTCTGCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTVISAH*SLCSRV
Trigger: AACCCGGGAGCAGAGACTGCAGTGAGCTGAGATCAC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTCCAATTCTGATCTaGGGAGGGGCTGCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SDSHSFVSICMACTGQRTSPILI*GGAAQR
Trigger: CCTTTGGGCAGCCCCTCCGCAGATCAGAATTGGAGA...AGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611381.4
CDS-3UTR GCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTAACTGGAAGTGCGCCTaGGCACTCGGAGCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILANWKCA*ALGASL
Trigger: GAGCGAGGCTCCGAGTGCGCAGGCGCACTTCCAGTT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS-3UTR GCA 90 bp CAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGGTCCTGTTTCCTAGCTTGCTaGAAGGGGAACATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QFCQYLHGLYGAENFWRSCFLAC*KGNICC
Trigger: GCAGCAAATGTTCCCCTTGCAGCAAGCTAGGAAACA...GGACCTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGCCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAAGATCATGTGTGCAGTaGGATACTTCTGATACATCC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQRSCVQ*DTSDTS
Trigger: GGATGTATCAGAAGTATCCCACTGCACACATGATCT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAGCCTCCTGAGTAGCTaGGACTACCACTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPSLLSS*DYHCMP
Trigger: TGGCATGCAGTGGTAGTCCCAGCTACTCAGGAGGCT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGAGTCATTAGGGGATaGAGCAGGCCACTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSGVIRG*SRPLKL
Trigger: AAGCTTCAGTGGCCTGCTCCATCCCCTAATGACTCC...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWTRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGGGGCAGCACTCAGTTaGTTACAATTCATGCCATTC +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKGAALS*LQFMPF
Trigger: GAATGGCATGAATTGTAACCAACTGAGTGCTGCCCC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGCCACACATATGTCCTaGGCTCCCTCCCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSATHMS*APSLSM
Trigger: CATTGACAGGGAGGGAGCCCAGGACATATGTGTGGC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGCCACACATATGTCCTaGGCTCCCTCCCTGTCAATG +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAATHMS*APSLSM
Trigger: CATTGACAGGGAGGGAGCCCAGGACATATGTGTGGC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGTAGCCCTAAAAGGCTaGGTATCCATAAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWVALKG*VSISAW
Trigger: CCATGCACTTATGGATACCCAGCCTTTTAGGGCTAC...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTATCTTTGAATGTCACTaGTTCCTGGGGCGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTIFECH*FLGRGG
Trigger: ACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGAT...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGCTGTATAAGCTCCTCTaGGCAGGGTCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: LLTSQESSNVACKRSCVQLYKLL*AGSTWY
Trigger: GTACCATGTCGACCCTGCTCAGAGGAGCTTATACAG...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
CDS-3UTR TCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAACTGTATAAGCTCCTCTaGGCAGGGTCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKLYKLL*AGSTWY
Trigger: GTACCATGTCGACCCTGCTCAGAGGAGCTTATACAG...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp ACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGAGCAAATGTGATGATTTaGCTTCAGGCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSCCKCDDLTSGLVFQSGANVMI*LQAWSS
Trigger: GGAAGACCAGGCCTGAAGTCAAATCATCACATTTGC...TCCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCACTGGGTGGATGCCTCTaGTCCCAGATGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSLGGCL*SQMSLP
Trigger: TGGAAGAGACATCTGGGATCAGAGGCATCCACCCAG...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCCTGGGTGGATGCCTCTaGTCCCAGATGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVLGGCL*SQMSLP
Trigger: TGGAAGAGACATCTGGGATCAGAGGCATCCACCCAG...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGTGTAAGAGCTGCAGTTaGGTGCAGTTGTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKCKSCS*VQLSSN
Trigger: ATTGCTTGACAACTGCACTCAACTGCAGCTCTTACA...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGTTGATCTAATTCTTTaGATGGTGACTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQVDLIL*MVTSWS
Trigger: ACTCCAGGAAGTCACCATTCAAAGAATTAGATCAAC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAAGTGGTTGGGCTAGTTaGTCTAATTCTTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQSGWAS*SNSLNG
Trigger: ACCATTCAAAGAATTAGATCAACTAGCCCAACCACT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATATGGAATGCAGTAGTGTaGTCTCAGCTCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIWNAVV*SQLTAV
Trigger: GACTGCAGTGAGCTGAGATCACACTACTGCATTCCA...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGATGGAGCAGGCCACTaGAGCTTAGCTGATGCTTTA +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVDGAGH*SLADAL
Trigger: TAAAGCATCAGCTAAGCTTCAGTGGCCTGCTCCATC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAAGCCTTCTGGTCAATaGGCCACACATATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIKPSGQ*ATHMSW
Trigger: CCAGGACATATGTGTGGCTCATTGACCAGAAGGCTT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATGCTTTGGTAAGGTTTaGCTCTCTTATGAATCCTCA +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQCFGKV*LSYESS
Trigger: TGAGGATTCATAAGAGAGGCAAACCTTACCAAAGCA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGCACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCAGCTGGGACTACCACTaGATGCCACCATGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SNVACKRSCVQWDTSDTSSWDYH*MPPCPA
Trigger: AGCTGGGCATGGTGGCATGCAGTGGTAGTCCCAGCT...GGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCGTGATCTCAGCTCACTaGAGTCTCTGCTCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVVISAH*SLCSRV
Trigger: AACCCGGGAGCAGAGACTGCAGTGAGCTGAGATCAC...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAAAAGGCAATGAATCCTaGTATGTGGCATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQKGNES*YVACKE
Trigger: TTCTTTGCATGCCACATAGCAGGATTCATTGCCTTT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp ACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGACTGGGTATCCATAAGTaGATGGTTCATGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TSCCKCDDLTSGLVFQSGLGIHK*MVHGCW
Trigger: CCAACAGCCATGAACCATGCACTTATGGATACCCAG...TCCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCTCTCCAATTCTGATCTaGGGAGGGGCTGCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVSPILI*GGAAQR
Trigger: CCTTTGGGCAGCCCCTCCGCAGATCAGAATTGGAGA...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAATTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATATGTTGCCTGTCTAACTaGCTGCTAACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSICCLSN*LLTSQE
Trigger: CTCCTGGGATGTTAGCAGCCAGTTAGACAGGCAACA...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGGCTGTATCATACTGTaGAAACCACTTCACATCTTT +
Preference number: 4 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQGCIIL*KPLHIF
Trigger: AAAGATGTGAAGTGGTTTCCACAGTATGATACAGCC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCAGCCTCCTGAGTAGCTaGGACTACCACTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVSLLSS*DYHCMP
Trigger: TGGCATGCAGTGGTAGTCCCAGCTACTCAGGAGGCT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGGAGTCATTAGGGGATaGAGCAGGCCACTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAGVIRG*SRPLKL
Trigger: AAGCTTCAGTGGCCTGCTCCATCCCCTAATGACTCC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGCAGTGGGATACTTCTaGTACATCCTGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSAVGYF*YILLQM
Trigger: CATTTGCAGCAGGATGTATCAGAAGTATCCCACTGC...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGAGATGTGCTGTGCTTaGAATCTATGCTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKEMCCA*NLCCSY
Trigger: GTAACTACAGCATAGATTTCAAGCACAGCACATCTC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAGAGTGCTTTCATCTTaGGTGAGAGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVRVLSS*VRDVLC
Trigger: GCACAGCACATCTCTCACTCAAGATGAAAGCACTCT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAAGAGTGCTTTCATCTTaGGTGAGAGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIRVLSS*VRDVLC
Trigger: GCACAGCACATCTCTCACTCAAGATGAAAGCACTCT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTTGGAATGCAGTAGTGTaGTCTCAGCTCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCWNAVV*SQLTAV
Trigger: GACTGCAGTGAGCTGAGATCACACTACTGCATTCCA...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATATCAATGAAGATGTGCTaGGTTTCAGAGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSISMKMC*VSEWWL
Trigger: CAGCCACCACTCTGAAACTCAGCACATCTTCATTGA...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GCTGCTTGCTGGAATAAATGTTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTGGTTATCTCCAATTCTaGTCTGCGGAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AACWNKCSRVVKNLILTVGYLQF*SAEGLP
Trigger: GGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACC...AACTGTGAGAATCAGATTTTTCACAACTCTGGAACATTTATTCCAGCAAGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611381.4
CDS-3UTR TCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGTCAGTACTAGTCCTTaGTCCTCAGGAACTCAAGAG +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIVSTSP*SSGTQE
Trigger: CTCTTGAGTTCCTGAGGATCAAGGACTAGTACTGAC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGCTATGCTGTAGTTACTaGTTTGGTAAGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKLCCSY*FGKVCL
Trigger: GAGGCAAACCTTACCAAAGCAGTAACTACAGCATAG...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGATGTGTGTGTGTCTTaGTCTGTTGCTCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPDVCVS*SVAQAG
Trigger: TCCAGCCTGAGCAACAGAGCAAGACACACACACATC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGATGTGTGTGTGTCTTaGTCTGTTGCTCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHADVCVS*SVAQAG
Trigger: TCCAGCCTGAGCAACAGAGCAAGACACACACACATC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTATACTTGGGTGCTGCTaGATGCCATCCATGATGAGA +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSILGCC*MPSMMR
Trigger: TCTCATCATGGATGGCATGCAGCAGCACCCAAGTAT...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCTGGGTATCCATAAGTaGATGGTTCATGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVLGIHK*MVHGCW
Trigger: CCAACAGCCATGAACCATGCACTTATGGATACCCAG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTCCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTTGTTGCCTGTCTAACTaGCTGCTAACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSCCLSN*LLTSQE
Trigger: CTCCTGGGATGTTAGCAGCCAGTTAGACAGGCAACA...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTTGCCTGTCTAACTaGCTGCTAACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKCCLSN*LLTSQE
Trigger: CTCCTGGGATGTTAGCAGCCAGTTAGACAGGCAACA...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
CDS-3UTR CCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGCCTCCTGAGTAGCTaGGACTACCACTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLSLLSS*DYHCMP
Trigger: TGGCATGCAGTGGTAGTCCCAGCTACTCAGGAGGCT...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCGGAGTCATTAGGGGATaGAGCAGGCCACTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVGVIRG*SRPLKL
Trigger: AAGCTTCAGTGGCCTGCTCCATCCCCTAATGACTCC...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGCCAAATTGGTCTGCATaGTCAATGTCAACACACCAA +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKPNWSA*SMSTHQ
Trigger: TTGGTGTGTTGACATTGACCATGCAGACCAATTTGG...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSITRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp CTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGGAGGCAGACAAATCCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LTVLSVFAWLVRGRELLEEADKS*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGGATTTGTCTGCCTC...CTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR TCA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACACTGTATAAGCTCCTCTaGGCAGGGTCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTLYKLL*AGSTWY
Trigger: GTACCATGTCGACCCTGCTCAGAGGAGCTTATACAG...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGCAAATGTGATGATTTaGCTTCAGGCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTANVMI*LQAWSS
Trigger: GGAAGACCAGGCCTGAAGTCAAATCATCACATTTGC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTGCAGTGGGATACTTCTaGTACATCCTGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCAVGYF*YILLQM
Trigger: CATTTGCAGCAGGATGTATCAGAAGTATCCCACTGC...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAAGCAGTGGGATACTTCTaGTACATCCTGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKAVGYF*YILLQM
Trigger: CATTTGCAGCAGGATGTATCAGAAGTATCCCACTGC...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTCTGGGTGGATGCCTCTaGTCCCAGATGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILALGGCL*SQMSLP
Trigger: TGGAAGAGACATCTGGGATCAGAGGCATCCACCCAG...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCAGAGTGCTTTCATCTTaGGTGAGAGATGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVRVLSS*VRDVLC
Trigger: GCACAGCACATCTCTCACTCAAGATGAAAGCACTCT...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCATGTTGAGTAAGCGATaGGCGTCGACTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAMLSKR*ASTKGF
Trigger: GAAGCCTTTAGTCGACGCTCATCGCTTACTCAACAT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAATGTTGAGTAAGCGATaGGCGTCGACTAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPMLSKR*ASTKGF
Trigger: GAAGCCTTTAGTCGACGCTCATCGCTTACTCAACAT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGCTGTTGTTTTCCCATTaGTCTGATACTGTAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWLLFSH*SDTVGL
Trigger: TAAGCCTACAGTATCAGATCAATGGGAAAACAACAG...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTTCAGTAGGGAGGGTCTaGGTAGAATTACCCATTGTC +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSSVGRV*VELPIV
Trigger: GACAATGGGTAATTCTACTCAGACCCTCCCTACTGA...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCAAGCCTTCTGGTCAATaGGCCACACATATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVKPSGQ*ATHMSW
Trigger: CCAGGACATATGTGTGGCTCATTGACCAGAAGGCTT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTGTCAGTACTAGTCCTTaGTCCTCAGGAACTCAAGAG +
Preference number: 4 (lower is better)
Translates to: SQESSNVACKRSCVQWDTVSTSP*SSGTQE
Trigger: CTCTTGAGTTCCTGAGGATCAAGGACTAGTACTGAC...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
CDS-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCATTGCTCAGGCTGGAATaGAGTAGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPLLRLE*SSVISA
Trigger: AGCTGAGATCACACTACTGCATTCCAGCCTGAGCAA...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGAAAGGCAATGAATCCTaGTATGTGGCATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWKGNES*YVACKE
Trigger: TTCTTTGCATGCCACATAGCAGGATTCATTGCCTTT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTATACTTGGGTGCTGCTaGATGCCATCCATGATGAGA +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSILGCC*MPSMMR
Trigger: TCTCATCATGGATGGCATGCAGCAGCACCCAAGTAT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTAGAATACTTGGGTGCTaGTGCATGCCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCRILGC*CMPSMM
Trigger: CATCATGGATGGCATGCAGCAGCACCCAAGTATTCT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACACTGGGTATCCATAAGTaGATGGTTCATGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTLGIHK*MVHGCW
Trigger: CCAACAGCCATGAACCATGCACTTATGGATACCCAG...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCACTGGGTATCCATAAGTaGATGGTTCATGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPLGIHK*MVHGCW
Trigger: CCAACAGCCATGAACCATGCACTTATGGATACCCAG...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGTTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAACCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGGCTGTATCATACTGTaGAAACCACTTCACATCTTT +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKGCIIL*KPLHIF
Trigger: AAAGATGTGAAGTGGTTTCCACAGTATGATACAGCC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGTAGCCCTAAAAGGCTaGGTATCCATAAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTVALKG*VSISAW
Trigger: CCATGCACTTATGGATACCCAGCCTTTTAGGGCTAC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR CAA 72 bp GGAGGCAGCTCTTGTGTAAAAGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCATGGTCAATGTCAACA +
Preference number: 4 (lower is better)
Translates to: GGSSCVKGINVQ*CPNWSAWSMST
Trigger: TGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCTTTTACACAAGAGCTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTCTGTATAAGCTCCTCTaGGCAGGGTCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILALYKLL*AGSTWY
Trigger: GTACCATGTCGACCCTGCTCAGAGGAGCTTATACAG...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTGCAAATGTGATGATTTaGCTTCAGGCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTANVMI*LQAWSS
Trigger: GGAAGACCAGGCCTGAAGTCAAATCATCACATTTGC...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTCAATATCTTGCCCCATaGTTCATATTTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCQYLAP*FIFRAG
Trigger: CCCAGCCCTAAATATGAATCATGGGGCAAGATATTG...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACACAATATCTTGCCCCATaGTTCATATTTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTQYLAP*FIFRAG
Trigger: CCCAGCCCTAAATATGAATCATGGGGCAAGATATTG...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCATGAGAGAAAGGCAATaGATCCTGCTATGTGGCATG +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAMRERQ*ILLCGM
Trigger: CATGCCACATAGCAGGATTCATTGCCTTTCTCTCAT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCTCAATGAAGATGTGCTaGGTTTCAGAGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVSMKMC*VSEWWL
Trigger: CAGCCACCACTCTGAAACTCAGCACATCTTCATTGA...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAAGCCTTCTGGTCAATaGGCCACACATATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLKPSGQ*ATHMSW
Trigger: CCAGGACATATGTGTGGCTCATTGACCAGAAGGCTT...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGGTTATCTCCAATTCTaGTCTGCGGAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSGYLQF*SAEGLP
Trigger: GGGCAGCCCCTCCGCAGATCAGAATTGGAGATAACC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGTCAGTACTAGTCCTTaGTCCTCAGGAACTCAAGAG +
Preference number: 4 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSVSTSP*SSGTQE
Trigger: CTCTTGAGTTCCTGAGGATCAAGGACTAGTACTGAC...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGTCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWSDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCTTCCAGTTTTCCTGTTaGCTGTCTAACTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAFQFSC*LSNWLL
Trigger: TAGCAGCCAGTTAGACAGGCAACAGGAAAACTGGAA...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTTTCCAGTTTTCCTGTTaGCTGTCTAACTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCFQFSC*LSNWLL
Trigger: TAGCAGCCAGTTAGACAGGCAACAGGAAAACTGGAA...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTCACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTCACTGCATGCCACCATaGCCAGCTAATTTTTGGATT +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCHCMPP*PANFWI
Trigger: AATCCAAAAATTAGCTGGGCATGGTGGCATGCAGTG...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGTGCCCAAATTGGTCTaGATGGTCAATGTCAACACA +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSVPKLV*MVNVNT
Trigger: TGTGTTGACATTGACCATGCAGACCAATTTGGGCAC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTATCAATGTCCAGTTGTaGCCAAATTGGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCINVQL*PNWSAW
Trigger: CCATGCAGACCAATTTGGGCACAACTGGACATTGAT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCATACTTGGGTGCTGCTaGATGCCATCCATGATGAGA +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVILGCC*MPSMMR
Trigger: TCTCATCATGGATGGCATGCAGCAGCACCCAAGTAT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCAGAATACTTGGGTGCTaGTGCATGCCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVRILGC*CMPSMM
Trigger: CATCATGGATGGCATGCAGCAGCACCCAAGTATTCT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGGGAACATTTGCTGCTTaGTGGAATAAATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LTVLSVFAWLVRGRELLEGTFAA*WNKCSR
Trigger: TCTGGAACATTTATTCCAGCAAGCAGCAAATGTTCC...CTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp CTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGTTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: LTVLSVFAWLVRGRELLEFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...CTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCCCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACATGTTGCCTGTCTAACTaGCTGCTAACATCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTCCLSN*LLTSQE
Trigger: CTCCTGGGATGTTAGCAGCCAGTTAGACAGGCAACA...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
CDS-3UTR CCA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGAAAGTGCTTTTTCATaGGCATGCCATAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKESAFS*ACHKKY
Trigger: GTACTTTTTATGGCATGCCCATGAAAAAGCACTTTC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGAAAGTGCTTTTTCATaGGCATGCCATAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWESAFS*ACHKKY
Trigger: GTACTTTTTATGGCATGCCCATGAAAAAGCACTTTC...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAGAATGAAGAATACTTaGGTGCTGCTGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPRMKNT*VLLHAI
Trigger: GATGGCATGCAGCAGCACCCAAGTATTCTTCATTCT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGTATCCATAAGTGCATaGTTCATGGCTGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPVSISA*FMAVGT
Trigger: AGTCCCAACAGCCATGAACCATGCACTTATGGATAC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGTATCCATAAGTGCATaGTTCATGGCTGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTVSISA*FMAVGT
Trigger: AGTCCCAACAGCCATGAACCATGCACTTATGGATAC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGGTTGTTTGTGCAAGTaGACAAAGAACCCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSGCLCK*TKNPPK
Trigger: CTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCGGTTGTTTGTGCAAGTaGACAAAGAACCCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVGCLCK*TKNPPK
Trigger: CTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACC...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGGGTTGTTTGTGCAAGTaGACAAAGAACCCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: VRDHVCSGILLIHPAANVGCLCK*TKNPPK
Trigger: CTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACC...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp CAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTCTGTATAAGCTCCTCTaGGCAGGGTCGACATGGTAC +
Preference number: 4 (lower is better)
Translates to: QSCEKSDSHSFVSICMACLYKLL*AGSTWY
Trigger: GTACCATGTCGACCCTGCTCAGAGGAGCTTATACAG...ACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR TCA 90 bp TCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCGCAGTGGGATACTTCTaGTACATCCTGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: SNVACKRSCVQWDTSDTSAVGYF*YILLQM
Trigger: CATTTGCAGCAGGATGTATCAGAAGTATCCCACTGC...GGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
CDS-3UTR TCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGGAGATGTGCTGTGCTTaGAATCTATGCTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: VRDHVCSGILLIHPAANVEMCCA*NLCCSY
Trigger: GTAACTACAGCATAGATTTCAAGCACAGCACATCTC...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTGTAAAGTCTGTAATGTaGCTAAAGTCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCVKSVM*LKSSPQ
Trigger: CTGTGGGGAAGACTTTAGTCACATTACAGACTTTAC...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGTAAAGTCTGTAATGTaGCTAAAGTCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAVKSVM*LKSSPQ
Trigger: CTGTGGGGAAGACTTTAGTCACATTACAGACTTTAC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTGTAAAGTCTGTAATGTaGCTAAAGTCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SQESSNVACKRSCVQWDTVKSVM*LKSSPQ
Trigger: CTGTGGGGAAGACTTTAGTCACATTACAGACTTTAC...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGTAAAGTCTGTAATGTaGCTAAAGTCTTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSVKSVM*LKSSPQ
Trigger: CTGTGGGGAAGACTTTAGTCACATTACAGACTTTAC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCACAAGTCAAGATGTTaGAACTTGATGATATCCTGC +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVHKSRC*NLMISC
Trigger: GCAGGATATCATCAAGTTTCAACATCTTGACTTGTG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGTTGATCTAATTCTTTaGATGGTGACTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSVDLIL*MVTSWS
Trigger: ACTCCAGGAAGTCACCATTCAAAGAATTAGATCAAC...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTGATGGAGCAGGCCACTaGAGCTTAGCTGATGCTTTA +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILADGAGH*SLADAL
Trigger: TAAAGCATCAGCTAAGCTTCAGTGGCCTGCTCCATC...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCATGAGAGAAAGGCAATaGATCCTGCTATGTGGCATG +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVMRERQ*ILLCGM
Trigger: CATGCCACATAGCAGGATTCATTGCCTTTCTCTCAT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACATCAGTAGGGAGGGTCTaGGTAGAATTACCCATTGTC +
Preference number: 4 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTSVGRV*VELPIV
Trigger: GACAATGGGTAATTCTACTCAGACCCTCCCTACTGA...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTAAGCCTTCTGGTCAATaGGCCACACATATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAKPSGQ*ATHMSW
Trigger: CCAGGACATATGTGTGGCTCATTGACCAGAAGGCTT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTCTTAGCCATTCTTGCTaGCATCACTCAGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: SDSHSFVSICMACTGQRTLSHSC*HHSGFF
Trigger: AAAGAATCCTGAGTGATGTCAGCAAGAATGGCTAAG...AGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR GCA 90 bp ACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGATCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 4 (lower is better)
Translates to: TSCCKCDDLTSGLVFQSGSDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...TCCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp ACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGAACTTCTGATACATCCTaGTGCAAATGTGATGATTTG +
Preference number: 4 (lower is better)
Translates to: TSCCKCDDLTSGLVFQSGTSDTS*CKCDDL
Trigger: CAAATCATCACATTTGCAGCAGGATGTATCAGAAGT...TCCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCATTCCAGTTTTCCTGTTaGCTGTCTAACTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSFQFSC*LSNWLL
Trigger: TAGCAGCCAGTTAGACAGGCAACAGGAAAACTGGAA...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACATTATGTCCCAAATTaGTTCCAAGGGTCTCACATT +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIHYVPN*FQGSHI
Trigger: AATGTGAGACCCTTGGAAGCAATTTGGGACATAATG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTGCTTTGGTAAGGTTTaGCTCTCTTATGAATCCTCA +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVCFGKV*LSYESS
Trigger: TGAGGATTCATAAGAGAGGCAAACCTTACCAAAGCA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGCTATGCTGTAGTTACTaGTTTGGTAAGGTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: VRDHVCSGILLIHPAANVLCCSY*FGKVCL
Trigger: GAGGCAAACCTTACCAAAGCAGTAACTACAGCATAG...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTAGAGCTGCAGTTGAGTaGAGTTGTCAAGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSRAAVE*SCQAIF
Trigger: AAAAATTGCTTGACAACTGCACTCAACTGCAGCTCT...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTGTCCAACCCATAGGTaGCCATTAAATGTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVCPTHR*PLNVCV
Trigger: TACACAAACATTTAATGGGCACCTATGGGTTGGACA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCTCTCCAATTCTGATCTaGGGAGGGGCTGCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSSPILI*GGAAQR
Trigger: CCTTTGGGCAGCCCCTCCGCAGATCAGAATTGGAGA...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTAGATCACCTCTGGCTTaGAAACTTGATATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSRSPLA*KLDIQE
Trigger: CTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000570495.5
CDS-3UTR CCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTTTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACACCTGGTCTTCCAGTCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTPGLPV*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGACTGGAAGACCAGG...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAGATCATGTGTGCAGTaGGATACTTCTGATACATCC +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPRSCVQ*DTSDTS
Trigger: GGATGTATCAGAAGTATCCCACTGCACACATGATCT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGAGATCATGTGTGCAGTaGGATACTTCTGATACATCC +
Preference number: 4 (lower is better)
Translates to: LLTSQESSNVACKRSCVQRSCVQ*DTSDTS
Trigger: GGATGTATCAGAAGTATCCCACTGCACACATGATCT...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564558.5
ENST00000571809.5
CDS-3UTR CCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCAGATCATGTGTGCAGTaGGATACTTCTGATACATCC +
Preference number: 4 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVRSCVQ*DTSDTS
Trigger: GGATGTATCAGAAGTATCCCACTGCACACATGATCT...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAAAGATCATGTGTGCAGTaGGATACTTCTGATACATCC +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKRSCVQ*DTSDTS
Trigger: GGATGTATCAGAAGTATCCCACTGCACACATGATCT...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAAGTAATTATTTTCTTCTaGGTGGATGCCTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKVIIFF*VDASDP
Trigger: GGGATCAGAGGCATCCACCCAGAAGAAAATAATTAC...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGTAATTATTTTCTTCTaGGTGGATGCCTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTVIIFF*VDASDP
Trigger: GGGATCAGAGGCATCCACCCAGAAGAAAATAATTAC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTATGTTTATAAAGGGATaGGCTCTGACCAAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCMFIKG*ALTKSP
Trigger: AGGGCTTTTGGTCAGAGCCCATCCCTTTATAAACAT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAATGTTTATAAAGGGATaGGCTCTGACCAAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPMFIKG*ALTKSP
Trigger: AGGGCTTTTGGTCAGAGCCCATCCCTTTATAAACAT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCTCACTGGCAAGGCCATaGGGCCCCAAATCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSSLARP*GPKSRK
Trigger: TTTCCTGGATTTGGGGCCCCATGGCCTTGCCAGTGA...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAACCAAATTGGTCTGCATaGTCAATGTCAACACACCAA +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKPNWSA*SMSTHQ
Trigger: TTGGTGTGTTGACATTGACCATGCAGACCAATTTGG...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCAGAATGAAGAATACTTaGGTGCTGCTGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVRMKNT*VLLHAI
Trigger: GATGGCATGCAGCAGCACCCAAGTATTCTTCATTCT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
3UTR CAA 72 bp GGCTGGGAAAATTTATCTATCTTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGTCCAGTTGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GWENLSIFGRQL*CKRNQCPVVPK
Trigger: TTTGGGCACAACTGGACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAAGATAGATAAATTTTCCCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTGCAGTGGGATACTTCTaGTACATCCTGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAAVGYF*YILLQM
Trigger: CATTTGCAGCAGGATGTATCAGAAGTATCCCACTGC...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAGCAGTGGGATACTTCTaGTACATCCTGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTAVGYF*YILLQM
Trigger: CATTTGCAGCAGGATGTATCAGAAGTATCCCACTGC...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
CDS-3UTR TCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGTGTTTAGTAAGAGCTaGACTTCGGCTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTVFSKS*TSAEVF
Trigger: AAAAACTTCAGCCGAAGTTCAGCTCTTACTAAACAC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTGTGTTTAGTAAGAGCTaGACTTCGGCTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCVFSKS*TSAEVF
Trigger: AAAAACTTCAGCCGAAGTTCAGCTCTTACTAAACAC...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCACACAAGTCAAGATGTTaGAACTTGATGATATCCTGC +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPHKSRC*NLMISC
Trigger: GCAGGATATCATCAAGTTTCAACATCTTGACTTGTG...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTAGTGGTTGGGCTAGTTaGTCTAATTCTTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCSGWAS*SNSLNG
Trigger: ACCATTCAAAGAATTAGATCAACTAGCCCAACCACT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGTTTTCCCATTGATCTaGTACTGTAGGCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVVFPLI*YCRLKK
Trigger: TTTCTTAAGCCTACAGTATCAGATCAATGGGAAAAC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTCTGTTGTTTTCCCATTaGTCTGATACTGTAGGCTTA +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCLLFSH*SDTVGL
Trigger: TAAGCCTACAGTATCAGATCAATGGGAAAACAACAG...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCCACTGAAGCTTAGCTaGTGCTTTACTAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVPLKLS*CFTNRK
Trigger: TTTTCTATTAGTAAAGCATCAGCTAAGCTTCAGTGG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTTCAATGAAGATGTGCTaGGTTTCAGAGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILASMKMC*VSEWWL
Trigger: CAGCCACCACTCTGAAACTCAGCACATCTTCATTGA...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATATCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSISDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCCATTATGTCCCAAATTaGTTCCAAGGGTCTCACATT +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAHYVPN*FQGSHI
Trigger: AATGTGAGACCCTTGGAAGCAATTTGGGACATAATG...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTCATTATGTCCCAAATTaGTTCCAAGGGTCTCACATT +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCHYVPN*FQGSHI
Trigger: AATGTGAGACCCTTGGAAGCAATTTGGGACATAATG...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAACATTATGTCCCAAATTaGTTCCAAGGGTCTCACATT +
Preference number: 4 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKHYVPN*FQGSHI
Trigger: AATGTGAGACCCTTGGAAGCAATTTGGGACATAATG...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTTGCTTTGGTAAGGTTTaGCTCTCTTATGAATCCTCA +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCCFGKV*LSYESS
Trigger: TGAGGATTCATAAGAGAGGCAAACCTTACCAAAGCA...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATACAAATCCAGGAAACCTaGATTTTTAACCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIQIQET*IFNPAL
Trigger: TAAAGCTGGGTTAAAAATGCAGGTTTCCTGGATTTG...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAGTGCCCAAATTGGTCTaGATGGTCAATGTCAACACA +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLVPKLV*MVNVNT
Trigger: TGTGTTGACATTGACCATGCAGACCAATTTGGGCAC...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAAAGGCAATGAATCCTaGTATGTGGCATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPKGNES*YVACKE
Trigger: TTCTTTGCATGCCACATAGCAGGATTCATTGCCTTT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAGATTTGGTTGTTTGTaGAAGTGGACAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPRFGCL*KWTKNP
Trigger: AGGGTTCTTTGTCCACTTGCACAAACAACCAAATCT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp AAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAAAATGTTTCCTAGCTTaGTGCAAGGGGAACATTTGC +
Preference number: 4 (lower is better)
Translates to: KSDSHSFVSICMACTGQRKCFLA*CKGNIC
Trigger: GCAAATGTTCCCCTTGCAGCAAGCTAGGAAACATTT...TCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp AAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAAGATCACCTCTGGCTTaGAAACTTGATATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KSDSHSFVSICMACTGQRRSPLA*KLDIQE
Trigger: CTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCT...TCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: SQESSNVACKRSCVQWDTFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
CDS-3UTR CCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCACCACTTCACATCTTTaGCTTTCAGTCTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVTTSHL*LSVFIC
Trigger: ACAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGT...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGGGCTGTATCATACTGTaGAAACCACTTCACATCTTT +
Preference number: 4 (lower is better)
Translates to: VRDHVCSGILLIHPAANVGCIIL*KPLHIF
Trigger: AAAGATGTGAAGTGGTTTCCACAGTATGATACAGCC...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAATGAATCCTGCTATGTaGCATGCAAAGAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPMNPAM*HAKNPV
Trigger: TACTGGATTCTTTGCATGCCACATAGCAGGATTCAT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCATGAATCCTGCTATGTaGCATGCAAAGAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAMNPAM*HAKNPV
Trigger: TACTGGATTCTTTGCATGCCACATAGCAGGATTCAT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACAAGAATGAAGAATACTTaGGTGCTGCTGCATGCCATC +
Preference number: 4 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTRMKNT*VLLHAI
Trigger: GATGGCATGCAGCAGCACCCAAGTATTCTTCATTCT...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTACAAGGTGTTTTGGATaGTCAGCATCTCAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILATRCFG*SASQKG
Trigger: GCCCTTCTGAGATGCTGACCATCCAAAACACCTTGT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTGGGGCAGCACTCAGTTaGTTACAATTCATGCCATTC +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAGAALS*LQFMPF
Trigger: GAATGGCATGAATTGTAACCAACTGAGTGCTGCCCC...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAGGGGCAGCACTCAGTTaGTTACAATTCATGCCATTC +
Preference number: 4 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTGAALS*LQFMPF
Trigger: GAATGGCATGAATTGTAACCAACTGAGTGCTGCCCC...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTGTAGCCCTAAAAGGCTaGGTATCCATAAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAVALKG*VSISAW
Trigger: CCATGCACTTATGGATACCCAGCCTTTTAGGGCTAC...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp ACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGGATTGATATCCTGCTCATaGGTAAATACACAAGATTTG +
Preference number: 4 (lower is better)
Translates to: TSCCKCDDLTSGLVFQSGLISCS*VNTQDL
Trigger: CAAATCTTGTGTATTTACCCATGAGCAGGATATCAA...TCCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp TTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTGGGGCAGAGAACTTCTaGAGGTCCTTACTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FQSCEKSDSHSFVSICMAGAENF*RSLLSH
Trigger: ATGGCTAAGTAAGGACCTCCAGAAGTTCTCTGCCCC...AGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
3UTR CAA 72 bp TGTTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTTaGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: CSRVVKNLILTV*SVFAWLVRGRE
Trigger: TTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTGGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR TCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGTTTTCCCATTGATCTaGTACTGTAGGCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSVFPLI*YCRLKK
Trigger: TTTCTTAAGCCTACAGTATCAGATCAATGGGAAAAC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCACCACTGAAGCTTAGCTaGTGCTTTACTAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPPLKLS*CFTNRK
Trigger: TTTTCTATTAGTAAAGCATCAGCTAAGCTTCAGTGG...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTACTTCTGATACATCCTaGTGCAAATGTGATGATTTG +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCTSDTS*CKCDDL
Trigger: CAAATCATCACATTTGCAGCAGGATGTATCAGAAGT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTACTTCTGATACATCCTaGTGCAAATGTGATGATTTG +
Preference number: 4 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSTSDTS*CKCDDL
Trigger: CAAATCATCACATTTGCAGCAGGATGTATCAGAAGT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGACTTCTGATACATCCTaGTGCAAATGTGATGATTTG +
Preference number: 4 (lower is better)
Translates to: VRDHVCSGILLIHPAANVTSDTS*CKCDDL
Trigger: CAAATCATCACATTTGCAGCAGGATGTATCAGAAGT...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTTTCCAGTTTTCCTGTTaGCTGTCTAACTGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAFQFSC*LSNWLL
Trigger: TAGCAGCCAGTTAGACAGGCAACAGGAAAACTGGAA...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTATCAATGTCCAGTTGTaGCCAAATTGGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAINVQL*PNWSAW
Trigger: CCATGCAGACCAATTTGGGCACAACTGGACATTGAT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATATTGAATATTCCATTTTaGATCACAGAGGAGAGACTA +
Preference number: 4 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSILNIPF*ITEERL
Trigger: TAGTCTCTCCTCTGTGATGCAAAATGGAATATTCAA...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAATGATGTTACAAGGATaGATTTCACGTAGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTMMLQG*ISRSPK
Trigger: TTTAGGGCTACGTGAAATGCATCCTTGTAACATCAT...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTATGATGTTACAAGGATaGATTTCACGTAGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCMMLQG*ISRSPK
Trigger: TTTAGGGCTACGTGAAATGCATCCTTGTAACATCAT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAAGATTTGGTTGTTTGTaGAAGTGGACAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSRFGCL*KWTKNP
Trigger: AGGGTTCTTTGTCCACTTGCACAAACAACCAAATCT...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTAGATTTGGTTGTTTGTaGAAGTGGACAAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTRFGCL*KWTKNP
Trigger: AGGGTTCTTTGTCCACTTGCACAAACAACCAAATCT...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TGTTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGTGTTTCCTAGCTTGCTaGAAGGGGAACATTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CSRVVKNLILTVLSVFAWCFLAC*KGNICC
Trigger: GCAGCAAATGTTCCCCTTGCAGCAAGCTAGGAAACA...CCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTGGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCACCACTTCACATCTTTaGCTTTCAGTCTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVTTSHL*LSVFIC
Trigger: ACAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGGAAAGTGCTTTTTCATaGGCATGCCATAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LLTSQESSNVACKRSCVQESAFS*ACHKKY
Trigger: GTACTTTTTATGGCATGCCCATGAAAAAGCACTTTC...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGAAAGTGCTTTTTCATaGGCATGCCATAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPESAFS*ACHKKY
Trigger: GTACTTTTTATGGCATGCCCATGAAAAAGCACTTTC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAGGTTGTTTGTGCAAGTaGACAAAGAACCCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTGCLCK*TKNPPK
Trigger: CTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACC...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
CDS-3UTR CCA 90 bp GATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTTTGATATCCTGCTCATaGGTAAATACACAAGATTTG +
Preference number: 4 (lower is better)
Translates to: DTSCCKCDDLTSGLVFQSLISCS*VNTQDL
Trigger: CAAATCTTGTGTATTTACCCATGAGCAGGATATCAA...AGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGCAAATGTGATGATTTaGCTTCAGGCCTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSANVMI*LQAWSS
Trigger: GGAAGACCAGGCCTGAAGTCAAATCATCACATTTGC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGCAGTGGGATACTTCTaGTACATCCTGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSAVGYF*YILLQM
Trigger: CATTTGCAGCAGGATGTATCAGAAGTATCCCACTGC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCGTTTTCCCATTGATCTaGTACTGTAGGCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVVFPLI*YCRLKK
Trigger: TTTCTTAAGCCTACAGTATCAGATCAATGGGAAAAC...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCCCACTGAAGCTTAGCTaGTGCTTTACTAATAGAAAA +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVPLKLS*CFTNRK
Trigger: TTTTCTATTAGTAAAGCATCAGCTAAGCTTCAGTGG...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCATCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 4 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSSDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCTCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVSDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCTGATACATCCTGCTaGAAATGTGATGATTTGACT +
Preference number: 4 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTSDTSC*KCDDLT
Trigger: AGTCAAATCATCACATTTGCAGCAGGATGTATCAGA...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTACTTCTGATACATCCTaGTGCAAATGTGATGATTTG +
Preference number: 4 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTTSDTS*CKCDDL
Trigger: CAAATCATCACATTTGCAGCAGGATGTATCAGAAGT...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCACTTCTGATACATCCTaGTGCAAATGTGATGATTTG +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVTSDTS*CKCDDL
Trigger: CAAATCATCACATTTGCAGCAGGATGTATCAGAAGT...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCTTGCTCAGGCTGGAATaGAGTAGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSLLRLE*SSVISA
Trigger: AGCTGAGATCACACTACTGCATTCCAGCCTGAGCAA...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAAAGGCAATGAATCCTaGTATGTGGCATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLKGNES*YVACKE
Trigger: TTCTTTGCATGCCACATAGCAGGATTCATTGCCTTT...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCAGAATACTTGGGTGCTaGTGCATGCCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSRILGC*CMPSMM
Trigger: CATCATGGATGGCATGCAGCAGCACCCAAGTATTCT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCATTGAATATTCCATTTTaGATCACAGAGGAGAGACTA +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPLNIPF*ITEERL
Trigger: TAGTCTCTCCTCTGTGATGCAAAATGGAATATTCAA...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTAGATCACCTCTGGCTTaGAAACTTGATATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILARSPLA*KLDIQE
Trigger: CTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000570495.5
CDS-3UTR CCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTATGTTTATAAAGGGATaGGCTCTGACCAAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAMFIKG*ALTKSP
Trigger: AGGGCTTTTGGTCAGAGCCCATCCCTTTATAAACAT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAATGTTTATAAAGGGATaGGCTCTGACCAAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTMFIKG*ALTKSP
Trigger: AGGGCTTTTGGTCAGAGCCCATCCCTTTATAAACAT...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CCA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCACAAGGCAAAATTTATaGCAATGGGCAATTAGACTT +
Preference number: 4 (lower is better)
Translates to: FINFRNSGGSTQLVTIHATRQNL*QWAIRL
Trigger: AAGTCTAATTGCCCATTGCCATAAATTTTGCCTTGT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAACAAGGCAAAATTTATaGCAATGGGCAATTAGACTT +
Preference number: 4 (lower is better)
Translates to: CYVACKESSRKGSPSIRPTRQNL*QWAIRL
Trigger: AAGTCTAATTGCCCATTGCCATAAATTTTGCCTTGT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGGGGCAGCACTCAGTTaGTTACAATTCATGCCATTC +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSGAALS*LQFMPF
Trigger: GAATGGCATGAATTGTAACCAACTGAGTGCTGCCCC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCTTGATATCCTGCTCATaGGTAAATACACAAGATTTG +
Preference number: 4 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVLISCS*VNTQDL
Trigger: CAAATCTTGTGTATTTACCCATGAGCAGGATATCAA...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp TGTTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGGAGGCAGACAAATCCTaGATAGAAAGGTCGTTGGAT +
Preference number: 4 (lower is better)
Translates to: CSRVVKNLILTVLSVFAWEADKS*IERSLD
Trigger: ATCCAACGACCTTTCTATCCAGGATTTGTCTGCCTC...CCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTGGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp AAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACATTTGCTGCTTGCTaGAATAAATGTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: KSDSHSFVSICMACTGQRTFAAC*NKCSRV
Trigger: AACTCTGGAACATTTATTCCAGCAAGCAGCAAATGT...TCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
3UTR CAA 72 bp AACTTGATATCCTGCTCATGGGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTA +
Preference number: 4 (lower is better)
Translates to: NLISCSWVNTQD*VVCASGQRTLL
Trigger: TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCATGAGCAGGATATCAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR TCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAGTGTTTAGTAAGAGCTaGACTTCGGCTGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTVFSKS*TSAEVF
Trigger: AAAAACTTCAGCCGAAGTTCAGCTCTTACTAAACAC...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR TCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTGTTGATCTAATTCTTTaGATGGTGACTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAVDLIL*MVTSWS
Trigger: ACTCCAGGAAGTCACCATTCAAAGAATTAGATCAAC...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCCAATATCTTGCCCCATaGTTCATATTTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSQYLAP*FIFRAG
Trigger: CCCAGCCCTAAATATGAATCATGGGGCAAGATATTG...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp TTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTCTTAGCCATTCTTGCTaGCATCACTCAGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: FQSCEKSDSHSFVSICMALSHSC*HHSGFF
Trigger: AAAGAATCCTGAGTGATGTCAGCAAGAATGGCTAAG...AGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR GCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAACTTCTGATACATCCTaGTGCAAATGTGATGATTTG +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLTSDTS*CKCDDL
Trigger: CAAATCATCACATTTGCAGCAGGATGTATCAGAAGT...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATGCTTTGGTAAGGTTTaGCTCTCTTATGAATCCTCA +
Preference number: 4 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTCFGKV*LSYESS
Trigger: TGAGGATTCATAAGAGAGGCAAACCTTACCAAAGCA...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR GCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTTGTCCAACCCATAGGTaGCCATTAAATGTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILACPTHR*PLNVCV
Trigger: TACACAAACATTTAATGGGCACCTATGGGTTGGACA...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCTTGAATATTCCATTTTaGATCACAGAGGAGAGACTA +
Preference number: 4 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVLNIPF*ITEERL
Trigger: TAGTCTCTCCTCTGTGATGCAAAATGGAATATTCAA...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAGGAAACTTGATATCCTaGTCATGGGTAAATACACAA +
Preference number: 4 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLGNLIS*SWVNTQ
Trigger: TTGTGTATTTACCCATGAGCAGGATATCAAGTTTCC...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR GCA 90 bp TTCCAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTAAATGTTTCCTAGCTTaGTGCAAGGGGAACATTTGC +
Preference number: 4 (lower is better)
Translates to: FQSCEKSDSHSFVSICMAKCFLA*CKGNIC
Trigger: GCAAATGTTCCCCTTGCAGCAAGCTAGGAAACATTT...AGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp CAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTAGATCACCTCTGGCTTaGAAACTTGATATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: QSCEKSDSHSFVSICMACRSPLA*KLDIQE
Trigger: CTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCT...ACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTACCACTTCACATCTTTaGCTTTCAGTCTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILATTSHL*LSVFIC
Trigger: ACAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTATGAATCCTGCTATGTaGCATGCAAAGAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAMNPAM*HAKNPV
Trigger: TACTGGATTCTTTGCATGCCACATAGCAGGATTCAT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGTATCCATAAGTGCATaGTTCATGGCTGTTGGGACT +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSVSISA*FMAVGT
Trigger: AGTCCCAACAGCCATGAACCATGCACTTATGGATAC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCATTGATATCCTGCTCATaGGTAAATACACAAGATTTG +
Preference number: 4 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSLISCS*VNTQDL
Trigger: CAAATCTTGTGTATTTACCCATGAGCAGGATATCAA...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CCA 90 bp TGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGACATTTGCTGCTTGCTaGAATAAATGTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: CEKSDSHSFVSICMACTGTFAAC*NKCSRV
Trigger: AACTCTGGAACATTTATTCCAGCAAGCAGCAAATGT...CCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGAGATGTGCTGTGCTTaGAATCTATGCTGTAGTTAC +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSEMCCA*NLCCSY
Trigger: GTAACTACAGCATAGATTTCAAGCACAGCACATCTC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTCAAATCCAGGAAACCTaGATTTTTAACCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAQIQET*IFNPAL
Trigger: TAAAGCTGGGTTAAAAATGCAGGTTTCCTGGATTTG...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTATGATGTTACAAGGATaGATTTCACGTAGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: YIPKLSKNPLILNQNILAMMLQG*ISRSPK
Trigger: TTTAGGGCTACGTGAAATGCATCCTTGTAACATCAT...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp CAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTGGAACATTTGCTGCTTaGTGGAATAAATGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QSCEKSDSHSFVSICMACGTFAA*WNKCSR
Trigger: TCTGGAACATTTATTCCAGCAAGCAGCAAATGTTCC...ACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGTAATTATTTTCTTCTaGGTGGATGCCTCTGATCCC +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSVIIFF*VDASDP
Trigger: GGGATCAGAGGCATCCACCCAGAAGAAAATAATTAC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCCCAAATTGGTCTGCATaGTCAATGTCAACACACCAA +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSPNWSA*SMSTHQ
Trigger: TTGGTGTGTTGACATTGACCATGCAGACCAATTTGG...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR TCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCAGTGGTTGGGCTAGTTaGTCTAATTCTTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSSGWAS*SNSLNG
Trigger: ACCATTCAAAGAATTAGATCAACTAGCCCAACCACT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCAGAGCTGCAGTTGAGTaGAGTTGTCAAGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSRAAVE*SCQAIF
Trigger: AAAAATTGCTTGACAACTGCACTCAACTGCAGCTCT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCTGTCCAACCCATAGGTaGCCATTAAATGTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSCPTHR*PLNVCV
Trigger: TACACAAACATTTAATGGGCACCTATGGGTTGGACA...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CCA 90 bp AGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTATTTGAAGATCACCTCTaGCTTGGAAACTTGATATCC +
Preference number: 4 (lower is better)
Translates to: RVVKNLILTVLSVFAWLVFEDHL*LGNLIS
Trigger: GGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAA...TACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCCAAATCCAGGAAACCTaGATTTTTAACCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSQIQET*IFNPAL
Trigger: TAAAGCTGGGTTAAAAATGCAGGTTTCCTGGATTTG...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR GCA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGGAAACTTGATATCCTaGTCATGGGTAAATACACAA +
Preference number: 4 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSGNLIS*SWVNTQ
Trigger: TTGTGTATTTACCCATGAGCAGGATATCAAGTTTCC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS CCA 90 bp GGCCCGGCTCCGGGGCAGGAGCCGCGCACTCAGAATCACCGCCTCTaGGGGGCTCCGGATTTCGCGACCTCCGGCCCACCCAGAGCCTCG +
Preference number: 5 (lower is better)
Translates to: GPAPGQEPRTQNHRL*GAPDFATSGPPRAS
Trigger: CGAGGCTCTGGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCAGAGGCGGTGATTCTGAGTGCGCGGCTCCTGCCCCGGAGCCGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573685.5
ENST00000576805.5
CDS CCA 90 bp GGAGGCACCGACCTCTCTTCTCCGCTCCAGGTCCGCGCTCGGGGCTaGCGGCGGGGGTGCCGGGAGGGAAGCGGCAGGCTAGTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGTDLSSPLQVRARG*RRGCREGSGRLVAG
Trigger: CCCTGCAACTAGCCTGCCGCTTCCCTCCCGGCACCCCCGCCGCCAGCCCCGAGCGCGGACCTGGAGCGGAGAAGAGAGGTCGGTGCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571382.5
CDS CCA 90 bp CAAAGGGGCCTCAGCCGCACCGGGGTCGGACAATGGCCGCAGCGGTaGGGCAGAACTGGAAGTGCGCCTGCGCACTCGGAGCCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: QRGLSRTGVGQWPQR*GRTGSAPAHSEPRS
Trigger: GGAGCGAGGCTCCGAGTGCGCAGGCGCACTTCCAGTTCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAGGCCCCTTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS CCA 90 bp CAGAGCAAGACTCTCTCTTCTCCGCTCCAGGTCCGCGCTCGGGGCTaGCGGCGGGGGTGCCGGGAGGGAAGCGGCAGGCTAGTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: QSKTLSSPLQVRARG*RRGCREGSGRLVAG
Trigger: CCCTGCAACTAGCCTGCCGCTTCCCTCCCGGCACCCCCGCCGCCAGCCCCGAGCGCGGACCTGGAGCGGAGAAGAGAGAGTCTTGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569109.5
ENST00000576305.5
CDS GCA 90 bp GGTGCACCAGAAGTGGAGTCTGACTCGTGCAGCTCCGCTGACTGCTaGTGGGCAGGGGGCCCCGCCCAAGCTCTACGTCCTGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GAPEVESDSCSSADC*WAGGPAQALRPEPW
Trigger: CCAAGGCTCAGGACGTAGAGCTTGGGCGGGGCCCCCTGCCCAGCAGCAGTCAGCGGAGCTGCACGAGTCAGACTCCACTTCTGGTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570884.1
ENST00000571382.5
CDS GCA 90 bp GCAAGACTCAAGGTACCAGGTGCACCAGAAGTGGAGTCTGACTCGTaGAGCTCCGCTGACTGCTGCTGGGCAGGGGGCCCCGCCCAAGCT +
Preference number: 5 (lower is better)
Translates to: ARLKVPGAPEVESDS*SSADCCWAGGPAQA
Trigger: AGCTTGGGCGGGGCCCCCTGCCCAGCAGCAGTCAGCGGAGCTGCACGAGTCAGACTCCACTTCTGGTGCACCTGGTACCTTGAGTCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570884.1
ENST00000571382.5
CDS GCA 90 bp CGCAGGGGGTCGCGCAGCCAGACTCCGTCCCGGCAGTTGTCGAGTTaGAAGGCGCGAAACCCACCAGGTGCTAAAAGCCAGCAGCCATGT +
Preference number: 5 (lower is better)
Translates to: RRGSRSQTPSRQLSS*KARNPPGAKSQQPC
Trigger: ACATGGCTGCTGGCTTTTAGCACCTGGTGGGTTTCGCGCCTTGCAACTCGACAACTGCCGGGACGGAGTCTGGCTGCGCGACCCCCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000569109.5
ENST00000576305.5
CDS CCA 90 bp GCCTGGGCAACAGAGCAAGACTCAAGGTACCAGGTGCACCAGAAGTaGAGTCTGACTCGTGCAGCTCCGCTGACTGCTGCTGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: AWATEQDSRYQVHQK*SLTRAAPLTAAGQG
Trigger: CCCCTGCCCAGCAGCAGTCAGCGGAGCTGCACGAGTCAGACTCCACTTCTGGTGCACCTGGTACCTTGAGTCTTGCTCTGTTGCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570884.1
ENST00000571382.5
CDS CCA 90 bp GCCCGGCTCCGGGGCAGGAGCTTTGAAGGAATGAAAATTAGAAGATaGCTAGCTGGGCGTGATGGCTCCCAGCTACTCAGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: ARLRGRSFEGMKIRR*LAGRDGSQLLRRLR
Trigger: CCTCAGCCTCCTGAGTAGCTGGGAGCCATCACGCCCAGCTAGCCATCTTCTAATTTTCATTCCTTCAAAGCTCCTGCCCCGGAGCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000569109.5
ENST00000571382.5
ENST00000576305.5
CDS-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAGTGTGTGACCTCGTGTaGAGTGAGGGATGTGCCATG +
Preference number: 5 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQVCDLV*SEGCAM
Trigger: CATGGCACATCCCTCACTCAACACGAGGTCACACAC...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGTGTGTGACCTCGTGTaGAGTGAGGGATGTGCCATG +
Preference number: 5 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKVCDLV*SEGCAM
Trigger: CATGGCACATCCCTCACTCAACACGAGGTCACACAC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACATGGTTCATGGCTGTaGGGACTAAGAAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQHGSWL*GLRKPS
Trigger: AGAAGGCTTTCTTAGTCCCAACAGCCATGAACCATG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAACTCTGGCTTGGAAACTaGATATCCAAGAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQLWLGN*ISKRNQ
Trigger: CTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAG...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000570495.5
CDS-3UTR CAA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGCCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTC +
Preference number: 5 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWPVVPK*VCMVNV
Trigger: GACATTGACCATGCAGACCAATTTGGGCACAACTGG...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGGTGTGTGACCTCGTGTaGAGTGAGGGATGTGCCATG +
Preference number: 5 (lower is better)
Translates to: VRDHVCSGILLIHPAANVVCDLV*SEGCAM
Trigger: CATGGCACATCCCTCACTCAACACGAGGTCACACAC...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp GAAAGCCTTCTGGTCAATGAGCCACACATATGTCCTGGGCTCCCTCCCTGTCAAAAAAAGCTGTTGACATaGGGGGTCACAAGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: ESLLVNEPHICPGLPPCQKKLLT*GVTSQD
Trigger: ATCTTGACTTGTGACCCCCAATGTCAACAGCTTTTT...TTGACAGGGAGGGAGCCCAGGACATATGTGTGGCTCATTGACCAGAAGGCTTTC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS CCA 90 bp TCTTTGAATGTCACTGATTCCTTTGAAGGAATGAAAATTAGAAGATaGCTAGCTGGGCGTGATGGCTCCCAGCTACTCAGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SLNVTDSFEGMKIRR*LAGRDGSQLLRRLR
Trigger: CCTCAGCCTCCTGAGTAGCTGGGAGCCATCACGCCCAGCTAGCCATCTTCTAATTTTCATTCCTTCAAAGGAATCAGTGACATTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570884.1
CDS-3UTR CAA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGCATTATGTCCCAAATaGCTTCCAAGGGTCTCACAT +
Preference number: 5 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKALCPK*LPRVSH
Trigger: ATGTGAGACCCTTGGAAGCAATTTGGGACATAATGC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCGTGTGTGACCTCGTGTaGAGTGAGGGATGTGCCATG +
Preference number: 5 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVVCDLV*SEGCAM
Trigger: CATGGCACATCCCTCACTCAACACGAGGTCACACAC...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGGACTAAGGCTGTAGTTACTGCTTaGGTAAGGTTTGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ALKGWVSISAWFMAVGTKAVVTA*VRFASL
Trigger: AAGAGAGGCAAACCTTACCAAAGCAGTAACTACAGC...CTTAGTCCCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTC +
Preference number: 5 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVPVVPK*VCMVNV
Trigger: GACATTGACCATGCAGACCAATTTGGGCACAACTGG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGGGGGCAGCACTCAGTaGGTTACAATTCATGCCATT +
Preference number: 5 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIGGSTQ*VTIHAI
Trigger: AATGGCATGAATTGTAACCAACTGAGTGCTGCCCCC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTTCTGGAGGTCCCTGCAAGGGGAACATTaGCTGCTTGCTGGAATAAAT +
Preference number: 5 (lower is better)
Translates to: QFCQYLHGLYGAENFWRSLQGEH*LLAGIN
Trigger: ATTTATTCCAGCAAGCAGCAAATGTTCCCCTTGCAG...GGACCTCCAGAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CAA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGAACCACTTCACATCTTaGGCTTTCAGTCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWNHFTS*AFSLHL
Trigger: CAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGTT...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTCCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTC +
Preference number: 5 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCPVVPK*VCMVNV
Trigger: GACATTGACCATGCAGACCAATTTGGGCACAACTGG...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVGINVQ*CPNWSA
Trigger: TGCAGACCAATTTGGGCACAACTGGACATTGATTCC...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATGGCTGTTGGTTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGT +
Preference number: 5 (lower is better)
Translates to: SRSPKRLGIHKCMVHGCWFGRQL*CKRNQC
Trigger: ACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAA...CCAACAGCCATGAACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTGGGGGCAGCACTCAGTaGGTTACAATTCATGCCATT +
Preference number: 5 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSGGSTQ*VTIHAI
Trigger: AATGGCATGAATTGTAACCAACTGAGTGCTGCCCCC...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS TCA 90 bp TACGGGGCAGAGAACTTCTGGAGGTCCTTACTTAGCCATTCTTGCTaGCATCACTCAGGATTCTTTCTTGGAAGTTTCTGTCTTCTTTCG +
Preference number: 5 (lower is better)
Translates to: YGAENFWRSLLSHSC*HHSGFFLGSFCLLS
Trigger: CGAAAGAAGACAGAAACTTCCAAGAAAGAATCCTGAGTGATGTCAGCAAGAATGGCTAAGTAAGGACCTCCAGAAGTTCTCTGCCCCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CAA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAGCATTATGTCCCAAATaGCTTCCAAGGGTCTCACAT +
Preference number: 5 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIALCPK*LPRVSH
Trigger: ATGTGAGACCCTTGGAAGCAATTTGGGACATAATGC...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAGINVQ*CPNWSA
Trigger: TGCAGACCAATTTGGGCACAACTGGACATTGATTCC...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAAGAATGAAGAATACTaGGGTGCTGCTGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVKNEEY*GAAACH
Trigger: ATGGCATGCAGCAGCACCCAAGTATTCTTCATTCTT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTCATGGTTCATGGCTGTaGGGACTAAGAAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCHGSWL*GLRKPS
Trigger: AGAAGGCTTTCTTAGTCCCAACAGCCATGAACCATG...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS TCA 90 bp AAGCGTTATTTATTAGAGCACAATATGAGACAATACACAGTAAGGTaGGGTGCTGCAGGCGCTCAAAGCACAAAAGATTGGGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: KRYLLEHNMRQYTVR*GAAGAQSTKDWERE
Trigger: CTCCCTCTCCCAATCTTTTGTGCTTTGAGCGCCTGCAGCACCTCACCTTACTGTGTATTGTCTCATATTGTGCTCTAATAAATAACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573161.1
CDS GCA 90 bp TTTATTAGAGCACAATATGAGACAATACACAGTAAGGTGAGGTGCTaGAGGCGCTCAAAGCACAAAAGATTGGGAGAGGGAGAGAACACT +
Preference number: 5 (lower is better)
Translates to: FIRAQYETIHSKVRC*RRSKHKRLGEGENT
Trigger: AGTGTTCTCTCCCTCTCCCAATCTTTTGTGCTTTGAGCGCCTGCAGCACCTCACCTTACTGTGTATTGTCTCATATTGTGCTCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573161.1
CDS GCA 90 bp TGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTaGAAATGTGATGATTTGACTTCAGGCCTGGTCTTCCAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: CKRSCVQWDTSDTSC*KCDDLTSGLVFQSE
Trigger: TTCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571720.2
CDS-3UTR CAA 90 bp TCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGAACTCTCTGGCTTGGAAACTaGATATCCAAGAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: SDSHSFVSICMACTGQRTLWLGN*ISKRNQ
Trigger: CTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAG...AGTTCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCTGCAAATGTGATGATTaGACTTCAGGCCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: FINFRNSGGSTQLVTIHACKCDD*TSGLVF
Trigger: GAAGACCAGGCCTGAAGTCAAATCATCACATTTGCA...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAGCATTATGTCCCAAATaGCTTCCAAGGGTCTCACAT +
Preference number: 5 (lower is better)
Translates to: CYVACKESSRKGSPSIRPALCPK*LPRVSH
Trigger: ATGTGAGACCCTTGGAAGCAATTTGGGACATAATGC...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp AGGAATCAATGTCCAGTTGTGCCCAAATTGGTCTGCATGGTCAATGTCAACACAGCTGTAGTTACTGCTTaGGTAAGGTTTGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: RNQCPVVPKLVCMVNVNTAVVTA*VRFASL
Trigger: AAGAGAGGCAAACCTTACCAAAGCAGTAACTACAGC...TGTGTTGACATTGACCATGCAGACCAATTTGGGCACAACTGGACATTGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTGCTGTAGTTACTGCTTaGGTAAGGTTTGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCAVVTA*VRFASL
Trigger: AAGAGAGGCAAACCTTACCAAAGCAGTAACTACAGC...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAGGATGAGAAATAGCTaGCTGACTAAAAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FINFRNSGGSTQLVTIHARMRNS*LTKSLL
Trigger: GAGCAGGCTTTTAGTCAGCAAGCTATTTCTCATCCT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAGGATGAGAAATAGCTaGCTGACTAAAAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: CYVACKESSRKGSPSIRPRMRNS*LTKSLL
Trigger: GAGCAGGCTTTTAGTCAGCAAGCTATTTCTCATCCT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CTGCTAACATCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGAGGATGAGAAATAGCTaGCTGACTAAAAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LLTSQESSNVACKRSCVQRMRNS*LTKSLL
Trigger: GAGCAGGCTTTTAGTCAGCAAGCTATTTCTCATCCT...CTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp TTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATGAGTAGGATGAGAAATAGCTaGCTGACTAAAAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FLKVVHYGDPQTTSSIMSRMRNS*LTKSLL
Trigger: GAGCAGGCTTTTAGTCAGCAAGCTATTTCTCATCCT...ACTCATTATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAACCACTTCACATCTTaGGCTTTCAGTCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVNHFTS*AFSLHL
Trigger: CAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGTT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCAAAGAATGAAGAATACTaGGGTGCTGCTGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: CYVACKESSRKGSPSIRPKNEEY*GAAACH
Trigger: ATGGCATGCAGCAGCACCCAAGTATTCTTCATTCTT...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTAGGGCAGATCTGCCATaGAATATTCCATTTTGCATC +
Preference number: 5 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVRADLP*NIPFCI
Trigger: GATGCAAAATGGAATATTCAATGGCAGATCTGCCCT...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTCATAAACAAGGTGTTTaGGATGGTCAGCATCTCAGA +
Preference number: 5 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVHKQGV*DGQHLR
Trigger: TCTGAGATGCTGACCATCCAAAACACCTTGTTTATG...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACAGGGGGCAGCACTCAGTaGGTTACAATTCATGCCATT +
Preference number: 5 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTGGSTQ*VTIHAI
Trigger: AATGGCATGAATTGTAACCAACTGAGTGCTGCCCCC...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp AAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGACAGTTTTGTCAGTATTaGCATGGCTTGTACGGGGCA +
Preference number: 5 (lower is better)
Translates to: KSDSHSFVSICMACTGQRQFCQY*HGLYGA
Trigger: TGCCCCGTACAAGCCATGCAAATACTGACAAAACTG...TCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS GCA 90 bp TTATTTATTAGAGCACAATATGAGACAATACACAGTAAGGTGAGGTaGTGCAGGCGCTCAAAGCACAAAAGATTGGGAGAGGGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LFIRAQYETIHSKVR*CRRSKHKRLGEGEN
Trigger: GTTCTCTCCCTCTCCCAATCTTTTGTGCTTTGAGCGCCTGCAGCACCTCACCTTACTGTGTATTGTCTCATATTGTGCTCTAATAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573161.1
CDS-3UTR CAA 90 bp CAAGGATGCATTTCACGTAGCCCTAAAAGGCTGGGTATCCATAAGTGCATGGTTTGCAGGAATGTTCAGTaGTGTAACCAAATTGGTGTT +
Preference number: 5 (lower is better)
Translates to: QGCISRSPKRLGIHKCMVCRNVQ*CNQIGV
Trigger: AACACCAATTTGGTTACACAACTGAACATTCCTGCA...AACCATGCACTTATGGATACCCAGCCTTTTAGGGCTACGTGAAATGCATCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTAAAAAGCTGTTGACATaGGGGGTCACAAGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: SQESSNVACKRSCVQWDTKKLLT*GVTSQD
Trigger: ATCTTGACTTGTGACCCCCAATGTCAACAGCTTTTT...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCAACCACTTCACATCTTaGGCTTTCAGTCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: FINFRNSGGSTQLVTIHANHFTS*AFSLHL
Trigger: CAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGTT...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTCCAGTTGTGCCCAAATaGGTCTGCATGGTCAATGTC +
Preference number: 5 (lower is better)
Translates to: YIPKLSKNPLILNQNILAPVVPK*VCMVNV
Trigger: GACATTGACCATGCAGACCAATTTGGGCACAACTGG...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGT +
Preference number: 5 (lower is better)
Translates to: SQESSNVACKRSCVQWDTFGRQL*CKRNQC
Trigger: ACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAA...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCATTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGT +
Preference number: 5 (lower is better)
Translates to: CYVACKESSRKGSPSIRPFGRQL*CKRNQC
Trigger: ACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAA...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TCCCAGGAGTCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTAGGGCAGATCTGCCATaGAATATTCCATTTTGCATC +
Preference number: 5 (lower is better)
Translates to: SQESSNVACKRSCVQWDTRADLP*NIPFCI
Trigger: GATGCAAAATGGAATATTCAATGGCAGATCTGCCCT...AGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTAGGGCAGATCTGCCATaGAATATTCCATTTTGCATC +
Preference number: 5 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCRADLP*NIPFCI
Trigger: GATGCAAAATGGAATATTCAATGGCAGATCTGCCCT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCCATAAACAAGGTGTTTaGGATGGTCAGCATCTCAGA +
Preference number: 5 (lower is better)
Translates to: FINFRNSGGSTQLVTIHAHKQGV*DGQHLR
Trigger: TCTGAGATGCTGACCATCCAAAACACCTTGTTTATG...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACACATGGTTCATGGCTGTaGGGACTAAGAAAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTHGSWL*GLRKPS
Trigger: AGAAGGCTTTCTTAGTCCCAACAGCCATGAACCATG...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp AAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACGGGGCAGAGACTGCAAGGGGAACATTaGCTGCTTGCTGGAATAAAT +
Preference number: 5 (lower is better)
Translates to: KSDSHSFVSICMACTGQRLQGEH*LLAGIN
Trigger: ATTTATTCCAGCAAGCAGCAAATGTTCCCCTTGCAG...TCTCTGCCCCGTACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS CCA 90 bp ATCCTGCTCATGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTaGACAAAGAACCCTCCTAAGGACAAGTCAGTACTAGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: ILLMGKYTRFGCLCK*TKNPPKDKSVLVLD
Trigger: ATCAAGGACTAGTACTGACTTGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCATGAGCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS CCA 90 bp AATAAGGAAATAAGTGAGCAGGACTGTGTTAGGCACAGATACAAATaGAACAGGATCACAGCCCATCTTAGGATCCTATATGCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: NKEISEQDCVRHRYK*NRITAHLRILYALH
Trigger: ATGGAGAGCATATAGGATCCTAAGATGGGCTGTGATCCTGTTCCATTTGTATCTGTGCCTAACACAGTCCTGCTCACTTATTTCCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571720.2
CDS-3UTR CAA 90 bp TTTATAAACTTCCGTAACAGTGGGGGCAGCACTCAGTTGGTTACAATTCATGCCTGCAGGAATGTTCAGTaGTGTAACCAAATTGGTGTT +
Preference number: 5 (lower is better)
Translates to: FINFRNSGGSTQLVTIHACRNVQ*CNQIGV
Trigger: AACACCAATTTGGTTACACAACTGAACATTCCTGCA...GGCATGAATTGTAACCAACTGAGTGCTGCCCCCACTGTTACGGAAGTTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGCAGGAATGTTCAGTaGTGTAACCAAATTGGTGTT +
Preference number: 5 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKCRNVQ*CNQIGV
Trigger: AACACCAATTTGGTTACACAACTGAACATTCCTGCA...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp TGCTATGTGGCATGCAAAGAATCCAGTAGGAAAGGTTCACCATCAATACGACCATCCAGGATAAATTCCTaGATCTGTTCCATTAGGGAA +
Preference number: 5 (lower is better)
Translates to: CYVACKESSRKGSPSIRPSRINS*ICSIRE
Trigger: TTCCCTAATGGAACAGATCAAGGAATTTATCCTGGA...TGGTCGTATTGATGGTGAACCTTTCCTACTGGATTCTTTGCATGCCACATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGTCCAGGATAAATTCCTaGATCTGTTCCATTAGGGAA +
Preference number: 5 (lower is better)
Translates to: VRDHVCSGILLIHPAANVSRINS*ICSIRE
Trigger: TTCCCTAATGGAACAGATCAAGGAATTTATCCTGGA...CACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp ATGCCATTCCTGAAAGTAGTCCACTATGGGGATCCCCAAACAACCAGTAGCATAATTGAATATTCCATTTaGCATCACAGAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: MPFLKVVHYGDPQTTSSIIEYSI*HHRGET
Trigger: AGTCTCTCCTCTGTGATGCAAAATGGAATATTCAAT...TATGCTACTGGTTGTTTGGGGATCCCCATAGTGGACTACTTTCAGGAATGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CAAAGTCCAACATACAGGCATATCATCCCCAACCAGCTACATACATGTAGCTGTACAAGATTTGGTTGTTaGTGCAAGTGGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: QSPTYRHIIPNQLHTCSCTRFGC*CKWTKN
Trigger: GTTCTTTGTCCACTTGCACAAACAACCAAATCTTGT...ACAGCTACATGTATGTAGCTGGTTGGGGATGATATGCCTGTATGTTGGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp CAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTCAGTATTTGCATGGCTaGTACGGGGCAGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: QSCEKSDSHSFVSICMACQYLHG*YGAENF
Trigger: GAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTG...ACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CAA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCTGCAGGAATGTTCAGTaGTGTAACCAAATTGGTGTT +
Preference number: 5 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVCRNVQ*CNQIGV
Trigger: AACACCAATTTGGTTACACAACTGAACATTCCTGCA...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp CCTTATAGGCTGTATCATACTGTGGAAACCACTTCACATCTTTGGCTTTCAGTCTCCAGGATAAATTCCTaGATCTGTTCCATTAGGGAA +
Preference number: 5 (lower is better)
Translates to: PYRLYHTVETTSHLWLSVSRINS*ICSIRE
Trigger: TTCCCTAATGGAACAGATCAAGGAATTTATCCTGGA...GACTGAAAGCCAAAGATGTGAAGTGGTTTCCACAGTATGATACAGCCTATAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAACCACTTCACATCTTaGGCTTTCAGTCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLNHFTS*AFSLHL
Trigger: CAGATGAAGACTGAAAGCCAAAGATGTGAAGTGGTT...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp TCTTCTAATGTAGCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACAAAGAATGAAGAATACTaGGGTGCTGCTGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: SSNVACKRSCVQWDTSDTKNEEY*GAAACH
Trigger: ATGGCATGCAGCAGCACCCAAGTATTCTTCATTCTT...TGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCATTGAATATTCCATTTaGCATCACAGAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVIEYSI*HHRGET
Trigger: AGTCTCTCCTCTGTGATGCAAAATGGAATATTCAAT...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564558.5
CDS-3UTR CAA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGGGGGCAGCACTCAGTaGGTTACAATTCATGCCATT +
Preference number: 5 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSGGSTQ*VTIHAI
Trigger: AATGGCATGAATTGTAACCAACTGAGTGCTGCCCCC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp GCATGTAAGAGATCATGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAAATACACAAGATTTGGTaGTTTGTGCAAGTGGACAAA +
Preference number: 5 (lower is better)
Translates to: ACKRSCVQWDTSDTSCCKIHKIW*FVQVDK
Trigger: TTTGTCCACTTGCACAAACAACCAAATCTTGTGTAT...TTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CAA 90 bp GATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAGGCCTGGTCGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGA +
Preference number: 5 (lower is better)
Translates to: DTSDTSCCKCDDLTSGLVVNTQD*VVCASG
Trigger: TCCACTTGCACAAACAACCAAATCTTGTGTATTTAC...GACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CAA 90 bp AGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACAGTATTTGCATGGCTaGTACGGGGCAGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: RVVKNLILTVLSVFAWLVQYLHG*YGAENF
Trigger: GAAGTTCTCTGCCCCGTACAAGCCATGCAAATACTG...TACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CAA 90 bp CAGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTCTCTGGCTTGGAAACTaGATATCCAAGAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: QSCEKSDSHSFVSICMACLWLGN*ISKRNQ
Trigger: CTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAG...ACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CAA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCGGAATCAATGTCCAGTaGTGCCCAAATTGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSGINVQ*CPNWSA
Trigger: TGCAGACCAATTTGGGCACAACTGGACATTGATTCC...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp TACATTCCCAAGCTCTCTAAGAATCCTCTGATCCTGAATCAGAACATTTTAGCTTTTGGGAGGCAGCTCTaGTGTAAAAGGAATCAATGT +
Preference number: 5 (lower is better)
Translates to: YIPKLSKNPLILNQNILAFGRQL*CKRNQC
Trigger: ACATTGATTCCTTTTACACAAGAGCTGCCTCCCAAA...AGCTAAAATGTTCTGATTCAGGATCAGAGGATTCTTAGAGAGCTTGGGAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS-3UTR CAA 90 bp AATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAAGGACAACAAGATTTGGTTGTTaGTGCAAGTGGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: NTQDLVVCASGQRTLLRTTRFGC*CKWTKN
Trigger: GTTCTTTGTCCACTTGCACAAACAACCAAATCTTGT...TGTCCTTAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CAA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTTCAATACACAAGATTTGGTaGTTTGTGCAAGTGGACAAA +
Preference number: 5 (lower is better)
Translates to: VQWDTSDTSCCKCDDLTSIHKIW*FVQVDK
Trigger: TTTGTCCACTTGCACAAACAACCAAATCTTGTGTAT...TGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CAA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTATACACAAGATTTGGTaGTTTGTGCAAGTGGACAAA +
Preference number: 5 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTIHKIW*FVQVDK
Trigger: TTTGTCCACTTGCACAAACAACCAAATCTTGTGTAT...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CAA 90 bp TGTGTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTTGACTGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGA +
Preference number: 5 (lower is better)
Translates to: CVQWDTSDTSCCKCDDLTVNTQD*VVCASG
Trigger: TCCACTTGCACAAACAACCAAATCTTGTGTATTTAC...AGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CAA 90 bp AGAGTTGTGAAAAATCTGATTCTCACAGTTTTGTCAGTATTTGCATGGCTTGTACAGTTTTGTCAGTATTaGCATGGCTTGTACGGGGCA +
Preference number: 5 (lower is better)
Translates to: RVVKNLILTVLSVFAWLVQFCQY*HGLYGA
Trigger: TGCCCCGTACAAGCCATGCAAATACTGACAAAACTG...TACAAGCCATGCAAATACTGACAAAACTGTGAGAATCAGATTTTTCACAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS-3UTR CAA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCCTCTGGCTTGGAAACTaGATATCCAAGAGAAACCAG +
Preference number: 5 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSLWLGN*ISKRNQ
Trigger: CTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAG...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000570495.5
CDS-3UTR CAA 90 bp TGGGTAAATACACAAGATTTGGTTGTTTGTGCAAGTGGACAAAGAACCCTCCTAGTAAATACACAAGATTaGGTTGTTTGTGCAAGTGGA +
Preference number: 5 (lower is better)
Translates to: WVNTQDLVVCASGQRTLLVNTQD*VVCASG
Trigger: TCCACTTGCACAAACAACCAAATCTTGTGTATTTAC...TAGGAGGGTTCTTTGTCCACTTGCACAAACAACCAAATCTTGTGTATTTACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000564558.5
ENST00000569323.5
ENST00000571809.5
ENST00000576805.5
CDS-3UTR CAA 90 bp AAGTCACTAGTAGTTCAACCATCTACAGTTTCTGTTAAATTGTGGTTTGTAAGCATTGAATATTCCATTTaGCATCACAGAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: KSLVVQPSTVSVKLWFVSIEYSI*HHRGET
Trigger: AGTCTCTCCTCTGTGATGCAAAATGGAATATTCAAT...GCTTACAAACCACAATTTAACAGAAACTGTAGATGGTTGAACTACTAGTGACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398253.6
ENST00000563169.7
ENST00000564558.5
ENST00000570495.5
CDS GCA 72 bp CAGGCTAGTTGCAGGGGAGGCGCCTCGCCCAGCACCTaGCGCAGGGGGTCGCGCAGCCAGACTCCGTCCCGG +
Preference number: 6 (lower is better)
Translates to: QASCRGGASPST*RRGSRSQTPSR
Trigger: CCGGGACGGAGTCTGGCTGCGCGACCCCCTGCGGCAGGTGCTGGGCGAGGCGCCTCCCCTGCAACTAGCCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000569109.5
ENST00000571382.5
ENST00000576305.5
CDS CCA 72 bp GCCCGGCTCCGGGGCAGGAGTCAGAATCACCGCCTCTaGGGGGCTCCGGATTTCGCGACCTCCGGCCCACCC +
Preference number: 6 (lower is better)
Translates to: ARLRGRSQNHRL*GAPDFATSGPP
Trigger: GGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCAGAGGCGGTGATTCTGACTCCTGCCCCGGAGCCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563169.7
ENST00000564558.5
ENST00000566573.5
CDS CCA 72 bp CCGGGGCAGGAGCCGCGCACTCAGAATCACCGCCTCTaGGGGGCTCCGGATTTCGCGACCTCCGGCCCACCC +
Preference number: 6 (lower is better)
Translates to: PGQEPRTQNHRL*GAPDFATSGPP
Trigger: GGGTGGGCCGGAGGTCGCGAAATCCGGAGCCCCCCAGAGGCGGTGATTCTGAGTGCGCGGCTCCTGCCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573685.5
ENST00000576805.5
CDS CCA 72 bp CTCAGCCGCACCGGGGTCGGACAATGGCCGCAGCGGTaGGGCAGAACTGGAAGTGCGCCTGCGCACTCGGAG +
Preference number: 6 (lower is better)
Translates to: LSRTGVGQWPQR*GRTGSAPAHSE
Trigger: CTCCGAGTGCGCAGGCGCACTTCCAGTTCTGCCCCACCGCTGCGGCCATTGTCCGACCCCGGTGCGGCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS GCA 72 bp CGGACAATGGCCGCAGCGGTGGGGCAGAACTGGAAGTaGGCCTGCGCACTCGGAGCCTCGCTCCTGCAACCC +
Preference number: 6 (lower is better)
Translates to: RTMAAAVGQNWK*ACALGASLLQP
Trigger: GGGTTGCAGGAGCGAGGCTCCGAGTGCGCAGGCGCACTTCCAGTTCTGCCCCACCGCTGCGGCCATTGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570495.5
CDS CCA 72 bp GTGGAGTCTGACTCGTGCAGCTCCGCTGACTGCTGCTaGGCAGGGGGCCCCGCCCAAGCTCTACGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: VESDSCSSADCC*AGGPAQALRPE
Trigger: CTCAGGACGTAGAGCTTGGGCGGGGCCCCCTGCCCAGCAGCAGTCAGCGGAGCTGCACGAGTCAGACTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570884.1
ENST00000571382.5
CDS CAA 72 bp CGCAGGGGGTCGCGCAGCCAGACTCCGTCCCGGCAGTaGTCGAGTTGCAAGGCGCGAAACCCACCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: RRGSRSQTPSRQ*SSCKARNPPGA
Trigger: AGCACCTGGTGGGTTTCGCGCCTTGCAACTCGACAACTGCCGGGACGGAGTCTGGCTGCGCGACCCCCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000569109.5
ENST00000571382.5
ENST00000576305.5
CDS CAA 90 bp AGCACCTGCCGCAGGGGGTCGCGCAGCCAGACTCCGTCCCGGCAGTaGTCGAGTTGCAAGGCGCGAAACCCACCAGGTGCTAAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: STCRRGSRSQTPSRQ*SSCKARNPPGAKSQ
Trigger: CTGGCTTTTAGCACCTGGTGGGTTTCGCGCCTTGCAACTCGACAACTGCCGGGACGGAGTCTGGCTGCGCGACCCCCTGCGGCAGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000569109.5
ENST00000571382.5
ENST00000576305.5
CDS GCA 72 bp AAGGTACCAGGTGCACCAGAAGTGGAGTCTGACTCGTaGAGCTCCGCTGACTGCTGCTGGGCAGGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: KVPGAPEVESDS*SSADCCWAGGP
Trigger: GGGGCCCCCTGCCCAGCAGCAGTCAGCGGAGCTGCACGAGTCAGACTCCACTTCTGGTGCACCTGGTACCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570884.1
ENST00000571382.5
CDS GCA 72 bp TCGCGCAGCCAGACTCCGTCCCGGCAGTTGTCGAGTTaGAAGGCGCGAAACCCACCAGGTGCTAAAAGCCAG +
Preference number: 6 (lower is better)
Translates to: SRSQTPSRQLSS*KARNPPGAKSQ
Trigger: CTGGCTTTTAGCACCTGGTGGGTTTCGCGCCTTGCAACTCGACAACTGCCGGGACGGAGTCTGGCTGCGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000569109.5
ENST00000571382.5
ENST00000576305.5
CDS CCA 72 bp ACAGAGCAAGACTCAAGGTACCAGGTGCACCAGAAGTaGAGTCTGACTCGTGCAGCTCCGCTGACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: TEQDSRYQVHQK*SLTRAAPLTAA
Trigger: AGCAGCAGTCAGCGGAGCTGCACGAGTCAGACTCCACTTCTGGTGCACCTGGTACCTTGAGTCTTGCTCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570884.1
ENST00000571382.5
CDS CCA 72 bp CGGGGCAGGAGCTTTGAAGGAATGAAAATTAGAAGATaGCTAGCTGGGCGTGATGGCTCCCAGCTACTCAGG +
Preference number: 6 (lower is better)
Translates to: RGRSFEGMKIRR*LAGRDGSQLLR
Trigger: CCTGAGTAGCTGGGAGCCATCACGCCCAGCTAGCCATCTTCTAATTTTCATTCCTTCAAAGCTCCTGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000569109.5
ENST00000571382.5
ENST00000576305.5
CDS GCA 72 bp GCACAATATGAGACAATACACAGTAAGGTGAGGTGCTaGAGGCGCTCAAAGCACAAAAGATTGGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: AQYETIHSKVRC*RRSKHKRLGEG
Trigger: TCCCTCTCCCAATCTTTTGTGCTTTGAGCGCCTGCAGCACCTCACCTTACTGTGTATTGTCTCATATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573161.1
CDS CCA 72 bp GTCACTGATTCCTTTGAAGGAATGAAAATTAGAAGATaGCTAGCTGGGCGTGATGGCTCCCAGCTACTCAGG +
Preference number: 6 (lower is better)
Translates to: VTDSFEGMKIRR*LAGRDGSQLLR
Trigger: CCTGAGTAGCTGGGAGCCATCACGCCCAGCTAGCCATCTTCTAATTTTCATTCCTTCAAAGGAATCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570884.1
CDS GCA 72 bp AGAGCACAATATGAGACAATACACAGTAAGGTGAGGTaGTGCAGGCGCTCAAAGCACAAAAGATTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: RAQYETIHSKVR*CRRSKHKRLGE
Trigger: CTCTCCCAATCTTTTGTGCTTTGAGCGCCTGCAGCACCTCACCTTACTGTGTATTGTCTCATATTGTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573161.1
CDS CAA 90 bp GTGCAGTGGGATACTTCTGATACATCCTGCTGCAAATGTGATGATTaGACTTCAGGCCTGGTCTTCCAGTCTGAAAGAAATCCAAAGTAC +
Preference number: 6 (lower is better)
Translates to: VQWDTSDTSCCKCDD*TSGLVFQSERNPKY
Trigger: GTACTTTGGATTTCTTTCAGACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571720.2
CDS TCA 72 bp GAGAACTTCTGGAGGTCCTTACTTAGCCATTCTTGCTaGCATCACTCAGGATTCTTTCTTGGAAGTTTCTGT +
Preference number: 6 (lower is better)
Translates to: ENFWRSLLSHSC*HHSGFFLGSFC
Trigger: ACAGAAACTTCCAAGAAAGAATCCTGAGTGATGTCAGCAAGAATGGCTAAGTAAGGACCTCCAGAAGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573113.3
ENST00000611381.4
CDS TCA 72 bp TTATTAGAGCACAATATGAGACAATACACAGTAAGGTaGGGTGCTGCAGGCGCTCAAAGCACAAAAGATTGG +
Preference number: 6 (lower is better)
Translates to: LLEHNMRQYTVR*GAAGAQSTKDW
Trigger: CCAATCTTTTGTGCTTTGAGCGCCTGCAGCACCTCACCTTACTGTGTATTGTCTCATATTGTGCTCTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573161.1
CDS CCA 72 bp ATAAGTGAGCAGGACTGTGTTAGGCACAGATACAAATaGAACAGGATCACAGCCCATCTTAGGATCCTATAT +
Preference number: 6 (lower is better)
Translates to: ISEQDCVRHRYK*NRITAHLRILY
Trigger: ATATAGGATCCTAAGATGGGCTGTGATCCTGTTCCATTTGTATCTGTGCCTAACACAGTCCTGCTCACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571720.2
CDS CCA 72 bp AATACTGCATTTTCTCAGTTTGTAAAGTATAACCCTTaGAGATCAAGGAGGTCCTTGATCAGGAGGCAAATC +
Preference number: 6 (lower is better)
Translates to: NTAFSQFVKYNP*RSRRSLIRRQI
Trigger: GATTTGCCTCCTGATCAAGGACCTCCTTGATCTCCAAGGGTTATACTTTACAAACTGAGAAAATGCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571720.2
CDS CCA 72 bp TGGGTTAGGCAAGTGAATGCATTTGTCAAAACCAACTaGATGGTACATATAAGACTTGTACATTTCACTGCA +
Preference number: 6 (lower is better)
Translates to: WVRQVNAFVKTN*MVHIRLVHFTA
Trigger: TGCAGTGAAATGTACAAGTCTTATATGTACCATCCAGTTGGTTTTGACAAATGCATTCACTTGCCTAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571720.2