Pregenerated sensors for ZFP57 (Homo sapiens)
Ensembl gene IDs: ENSG00000204644, ENSG00000206510, ENSG00000226858Ensembl transcript IDs: ENST00000376883.2, ENST00000383628.6, ENST00000416974.5, ENST00000432222.1, ENST00000435906.5, ENST00000437216.5, ENST00000446005.5, ENST00000448114.5, ENST00000488757.6, ENST00000547542.2, ENST00000547911.2, ENST00000548001.2, ENST00000548337.1, ENST00000548574.1, ENST00000548769.1, ENST00000549167.1, ENST00000549501.2, ENST00000552809.1, ENST00000552898.2, ENST00000552987.2, ENST00000553137.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGCTTCTTCTTCACCCGTGCCTCCCTCCAGCAATCTCTCTTCATaGCTTCCTGCAGGGTGGCAGCTACCTCGCCCACCCATGGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: LASSSPVPPSSNLSS*LPAGWQLPRPPMGA Trigger: CGCTCCCATGGGTGGGCGAGGTAGCTGCCACCCTGCAGGAAGCCATGAAGAGAGATTGCTGGAGGGAGGCACGGGTGAAGAAGAAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CCA 90 bp | CCCGTGCCTCCCTCCAGCAATCTCTCTTCATGGCTTCCTGCAGGGTaGCAGCTACCTCGCCCACCCATGGGAGCGTCTTCTGTACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: PVPPSSNLSSWLPAG*QLPRPPMGASSVQV Trigger: AACCTGTACAGAAGACGCTCCCATGGGTGGGCGAGGTAGCTGCCACCCTGCAGGAAGCCATGAAGAGAGATTGCTGGAGGGAGGCACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS GCA 90 bp | TTCTTCACCCGTGCCTCCCTCCAGCAATCTCTCTTCATGGCTTCCTaGAGGGTGGCAGCTACCTCGCCCACCCATGGGAGCGTCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: FFTRASLQQSLFMAS*RVAATSPTHGSVFC Trigger: ACAGAAGACGCTCCCATGGGTGGGCGAGGTAGCTGCCACCCTGCAGGAAGCCATGAAGAGAGATTGCTGGAGGGAGGCACGGGTGAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CCA 90 bp | TTATCCACTCCTGGCCTGGTGCCCAGGCCTGACTGGATTCCTTCCTaGGGCTATCTACCTCCCAGTAACTGGGCAGATGGAGAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSTPGLVPRPDWIPS*GYLPPSNWADGEAQ Trigger: CTGGGCCTCTCCATCTGCCCAGTTACTGGGAGGTAGATAGCCCCAGGAAGGAATCCAGTCAGGCCTGGGCACCAGGCCAGGAGTGGATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CCA 90 bp | GGGACCTGGCCACTGGTGCATGGTTCACATCCAAAAGCCCCTGGATaGACCTCTGGCTTCTGGCGATGGGTGTCTGGAATTCAGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GTWPLVHGSHPKAPG*TSGFWRWVSGIQPG Trigger: CCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | AGGCCTGACTGGATTCCTTCCTGGGGCTATCTACCTCCCAGTAACTaGGCAGATGGAGAGGCCCAGCAAAGGCCCCAGGGTTTGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: RPDWIPSWGYLPPSN*ADGEAQQRPQGLMW Trigger: CCACATCAAACCCTGGGGCCTTTGCTGGGCCTCTCCATCTGCCCAGTTACTGGGAGGTAGATAGCCCCAGGAAGGAATCCAGTCAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CCA 90 bp | GCCACTGGTGCATGGTTCACATCCAAAAGCCCCTGGATGGACCTCTaGCTTCTGGCGATGGGTGTCTGGAATTCAGCCTGGGTGCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ATGAWFTSKSPWMDL*LLAMGVWNSAWVPG Trigger: TCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | TCCTGGGACCTGGCCACTGGTGCATGGTTCACATCCAAAAGCCCCTaGATGGACCTCTGGCTTCTGGCGATGGGTGTCTGGAATTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SWDLATGAWFTSKSP*MDLWLLAMGVWNSA Trigger: GGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAGGTCCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | GGCTCCTGGTTTTGGTGTATCTTCTGGTGGCGTTTGAGCTCAGACTaGTCCCGGAAGCTCTTCCCACACACAGAGCATGAATGGGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GSWFWCIFWWRLSSD*SRKLFPHTEHEWGR Trigger: CCGGCCCCATTCATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | CCTCTGGCTTCTGGCGATGGGTGTCTGGAATTCAGCCTGGGTGCCTaGAATCCTCAAAGTACACTCCTGGTTTCCATCCACTGGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PLASGDGCLEFSLGA*NPQSTLLVSIHWLL Trigger: CAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | GTGCATGGTTCACATCCAAAAGCCCCTGGATGGACCTCTGGCTTCTaGCGATGGGTGTCTGGAATTCAGCCTGGGTGCCTGGAATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: VHGSHPKAPGWTSGF*RWVSGIQPGCLESS Trigger: TGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | CAGAGGGTTCCAGTGATGGGTGCCTGGGTCCTGGTCACAGGTGCTTaGTTCTTAAGTACAGATGCCTGGTTCTGGGCCATAGGACCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QRVPVMGAWVLVTGA*FLSTDAWFWAIGPS Trigger: TGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGGAACCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS GCA 90 bp | TGGACCTCTGGCTTCTGGCGATGGGTGTCTGGAATTCAGCCTGGGTaGCTGGAATCCTCAAAGTACACTCCTGGTTTCCATCCACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: WTSGFWRWVSGIQPG*LESSKYTPGFHPLA Trigger: AGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | CACTCCTGGTTTCCATCCACTGGCTCCTGGTTTTGGTGTATCTTCTaGTGGCGTTTGAGCTCAGACTGGTCCCGGAAGCTCTTCCCACAC | + |
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Preference number: 5 (lower is better) Translates to: HSWFPSTGSWFWCIF*WRLSSDWSRKLFPH Trigger: GTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | TCTCTTCATGGCTTCCTGCAGGGTGGCAGCTACCTCGCCCACCCATaGGAGCGTCTTCTGTACAGGTTCGATTGGCTTCAGCTGTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SLHGFLQGGSYLAHP*ERLLYRFDWLQLFK Trigger: TTTGAACAGCTGAAGCCAATCGAACCTGTACAGAAGACGCTCCCATGGGTGGGCGAGGTAGCTGCCACCCTGCAGGAAGCCATGAAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS TCA 90 bp | TTCCATCCACTGGCTCCTGGTTTTGGTGTATCTTCTGGTGGCGTTTaGGCTCAGACTGGTCCCGGAAGCTCTTCCCACACACAGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: FHPLAPGFGVSSGGV*AQTGPGSSSHTQSM Trigger: CATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS GCA 90 bp | GGGTGCCTGGGTCCTGGTCACAGGTGCTTGGTTCTTAAGTACAGATaGCTGGTTCTGGGCCATAGGACCCTCAGTTCTAAATATGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: GCLGPGHRCLVLKYR*LVLGHRTLSSKYGF Trigger: GAACCCATATTTAGAACTGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS GCA 90 bp | ATGAGAGTTGGATCTGGCATCCTGACAGAGGGTTCCAGTGATGGGTaGCTGGGTCCTGGTCACAGGTGCTTGGTTCTTAAGTACAGATGC | + |
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Preference number: 5 (lower is better) Translates to: MRVGSGILTEGSSDG*LGPGHRCLVLKYRC Trigger: GCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGGAACCCTCTGTCAGGATGCCAGATCCAACTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | GCCTGGGTCCTGGTCACAGGTGCTTGGTTCTTAAGTACAGATGCCTaGTTCTGGGCCATAGGACCCTCAGTTCTAAATATGGGTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: AWVLVTGAWFLSTDA*FWAIGPSVLNMGSW Trigger: CCAGGAACCCATATTTAGAACTGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | ATCCTCAAAGTACACTCCTGGTTTCCATCCACTGGCTCCTGGTTTTaGTGTATCTTCTGGTGGCGTTTGAGCTCAGACTGGTCCCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: ILKVHSWFPSTGSWF*CIFWWRLSSDWSRK Trigger: CTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | GTCTGGAATTCAGCCTGGGTGCCTGGAATCCTCAAAGTACACTCCTaGTTTCCATCCACTGGCTCCTGGTTTTGGTGTATCTTCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VWNSAWVPGILKVHS*FPSTGSWFWCIFWW Trigger: CCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | AGCTACCTCGCCCACCCATGGGAGCGTCTTCTGTACAGGTTCGATTaGCTTCAGCTGTTCAAACATCTTCTCTTCTGTGGTGTCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SYLAHPWERLLYRFD*LQLFKHLLFCGVSF Trigger: GAAAGAGACACCACAGAAGAGAAGATGTTTGAACAGCTGAAGCCAATCGAACCTGTACAGAAGACGCTCCCATGGGTGGGCGAGGTAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS TCA 90 bp | GCACCCGGGTCTCTCTCCACTGTTCCTCTTCTTGCTCAAGCTTGGTaGTTAGCTCTGGCTTATGCAGAAAGATTCTGGCCACAGATGTTA | + |
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Preference number: 5 (lower is better) Translates to: APGSLSTVPLLAQAW*LALAYAERFWPQML Trigger: TAACATCTGTGGCCAGAATCTTTCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGACCCGGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000549501.2 ENST00000552898.2 ENST00000552987.2 |
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| CDS CCA 90 bp | GTACAGGTTCGATTGGCTTCAGCTGTTCAAACATCTTCTCTTCTGTaGTGTCTCTTTCTAGCTTTATCCACTCCTGGCCTGGTGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VQVRLASAVQTSSLL*CLFLALSTPGLVPR Trigger: CCTGGGCACCAGGCCAGGAGTGGATAAAGCTAGAAAGAGACACCACAGAAGAGAAGATGTTTGAACAGCTGAAGCCAATCGAACCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS GCA 90 bp | ATTTATGTTTCAAGATGCTCACTGCCTCCTTTGTTTTGTCTCCTTTaGAGGCCTTCTCTCTTAGGCCTCTTCTCCTGGGGGTATGGATCC | + |
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Preference number: 5 (lower is better) Translates to: IYVSRCSLPPLFCLL*RPSLLGLFSWGYGS Trigger: GGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGAAGGCCTGCAAAGGAGACAAAACAAAGGAGGCAGTGAGCATCTTGAAACATAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 90 bp | AGCTCTTTCTTCTTGCCTTCTGAAAGGCCTTCTGTGTTTGGGAGATaGACAAACTCTCTCCACTGTTCCTCTTCTTGCTCAAGCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SSFFLPSERPSVFGR*TNSLHCSSSCSSLV Trigger: CACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGTTTGTCCATCTCCCAAACACAGAAGGCCTTTCAGAAGGCAAGAAGAAAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS TCA 90 bp | GATGGACAAACTCTCTCCACTGTTCCTCTTCTTGCTCAAGCTTGGTaGTTAGCTCTGGCTTATGCAGAAAGATTCTGGCCACAGATGTTA | + |
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Preference number: 5 (lower is better) Translates to: DGQTLSTVPLLAQAW*LALAYAERFWPQML Trigger: TAACATCTGTGGCCAGAATCTTTCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGTTTGTCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS GCA 90 bp | TCTGTGTTTGGGAGATGGACAAACTCTCTCCACTGTTCCTCTTCTTaGTCAAGCTTGGTGATTAGCTCTGGCTTATGCAGAAAGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: SVFGRWTNSLHCSSS*SSLVISSGLCRKIL Trigger: CAGAATCTTTCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGTTTGTCCATCTCCCAAACACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS GCA 72 bp | CGTGCCTCCCTCCAGCAATCTCTCTTCATGGCTTCCTaGAGGGTGGCAGCTACCTCGCCCACCCATGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RASLQQSLFMAS*RVAATSPTHGS Trigger: GCTCCCATGGGTGGGCGAGGTAGCTGCCACCCTGCAGGAAGCCATGAAGAGAGATTGCTGGAGGGAGGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
||
| CDS CCA 72 bp | TCTTCACCCGTGCCTCCCTCCAGCAATCTCTCTTCATaGCTTCCTGCAGGGTGGCAGCTACCTCGCCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPVPPSSNLSS*LPAGWQLPRPP Trigger: GGGTGGGCGAGGTAGCTGCCACCCTGCAGGAAGCCATGAAGAGAGATTGCTGGAGGGAGGCACGGGTGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
||
| CDS GCA 72 bp | GCCACTGGCCCAGGATCACCCGGCATTTATGGTGGCTaGTCTGGCACAGGTCCTTGCCTTTATAGCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ATGPGSPGIYGG*SGTGPCLYSPS Trigger: GGAGGGGCTATAAAGGCAAGGACCTGTGCCAGAGCAGCCACCATAAATGCCGGGTGATCCTGGGCCAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | CCTGGCCTGGTGCCCAGGCCTGACTGGATTCCTTCCTaGGGCTATCTACCTCCCAGTAACTGGGCAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLVPRPDWIPS*GYLPPSNWADG Trigger: TCCATCTGCCCAGTTACTGGGAGGTAGATAGCCCCAGGAAGGAATCCAGTCAGGCCTGGGCACCAGGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
||
| CDS CCA 72 bp | GGCTTCCTGCAGGGTGGCAGCTACCTCGCCCACCCATaGGAGCGTCTTCTGTACAGGTTCGATTGGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GFLQGGSYLAHP*ERLLYRFDWLQ Trigger: CTGAAGCCAATCGAACCTGTACAGAAGACGCTCCCATGGGTGGGCGAGGTAGCTGCCACCCTGCAGGAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
||
| CDS TCA 72 bp | TGCTTCCATTCCTCCCCAGCCATAGTGGGGACATCATaGGAGAAGCCAAGCCACTGGCCCAGGATCACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CFHSSPAIVGTS*EKPSHWPRITR Trigger: CCGGGTGATCCTGGGCCAGTGGCTTGGCTTCTCTCATGATGTCCCCACTATGGCTGGGGAGGAATGGAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | CTGGCCACTGGTGCATGGTTCACATCCAAAAGCCCCTaGATGGACCTCTGGCTTCTGGCGATGGGTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LATGAWFTSKSP*MDLWLLAMGVW Trigger: CCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS TCA 72 bp | TCTAGCTTTATCCACTCCTGGCCTGGTGCCCAGGCCTaGCTGGATTCCTTCCTGGGGCTATCTACCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSFIHSWPGAQA*LDSFLGLSTSQ Trigger: CTGGGAGGTAGATAGCCCCAGGAAGGAATCCAGTCAGGCCTGGGCACCAGGCCAGGAGTGGATAAAGCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
||
| CDS CCA 72 bp | TCACATCCAAAAGCCCCTGGATGGACCTCTGGCTTCTaGCGATGGGTGTCTGGAATTCAGCCTGGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHPKAPGWTSGF*RWVSGIQPGCL Trigger: CAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CAA 90 bp | ACAGAGGGTTCCAGTGATGGGTGCCTGGGTCCTGGTCACAGGTGCTaGGTTCTTAAGTACAGATGCCTGGTTCTGGGCCATAGGACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TEGSSDGCLGPGHRC*VLKYRCLVLGHRTL Trigger: GAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGGAACCCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | GCATGGTTCACATCCAAAAGCCCCTGGATGGACCTCTaGCTTCTGGCGATGGGTGTCTGGAATTCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AWFTSKSPWMDL*LLAMGVWNSAW Trigger: CCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS TCA 72 bp | CTGGCTCCTGGTTTTGGTGTATCTTCTGGTGGCGTTTaGGCTCAGACTGGTCCCGGAAGCTCTTCCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: LAPGFGVSSGGV*AQTGPGSSSHT Trigger: TGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | CCATCCACTGGCTCCTGGTTTTGGTGTATCTTCTGGTaGCGTTTGAGCTCAGACTGGTCCCGGAAGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSTGSWFWCIFW*RLSSDWSRKLF Trigger: GAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | CCACTGGTGCATGGTTCACATCCAAAAGCCCCTGGATaGACCTCTGGCTTCTGGCGATGGGTGTCTGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: PLVHGSHPKAPG*TSGFWRWVSGI Trigger: AATTCCAGACACCCATCGCCAGAAGCCAGAGGTCCATCCAGGGGCTTTTGGATGTGAACCATGCACCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 72 bp | CCAGTGATGGGTGCCTGGGTCCTGGTCACAGGTGCTTaGTTCTTAAGTACAGATGCCTGGTTCTGGGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: PVMGAWVLVTGA*FLSTDAWFWAI Trigger: TATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACCCAGGCACCCATCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CAA 72 bp | ACTGGCTCCTGGTTTTGGTGTATCTTCTGGTGGCGTTaGAGCTCAGACTGGTCCCGGAAGCTCTTCCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: TGSWFWCIFWWR*SSDWSRKLFPH Trigger: GTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS TCA 72 bp | ACTTGCTGCAATGGAAGCAGTAGTTGGGCGGCTCTGTaGGGTGGGCCTTCTGGTGTCTGGAGAGATAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: TCCNGSSSWAAL*GGPSGVWRDRI Trigger: AATCCTATCTCTCCAGACACCAGAAGGCCCACCTCACAGAGCCGCCCAACTACTGCTTCCATTGCAGCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS GCA 72 bp | GGCTTCTGGCGATGGGTGTCTGGAATTCAGCCTGGGTaGCTGGAATCCTCAAAGTACACTCCTGGTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GFWRWVSGIQPG*LESSKYTPGFH Trigger: ATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 72 bp | TTTCCATCCACTGGCTCCTGGTTTTGGTGTATCTTCTaGTGGCGTTTGAGCTCAGACTGGTCCCGGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FPSTGSWFWCIF*WRLSSDWSRKL Trigger: GAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 72 bp | TCTGGCGATGGGTGTCTGGAATTCAGCCTGGGTGCCTaGAATCCTCAAAGTACACTCCTGGTTTCCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGDGCLEFSLGA*NPQSTLLVSIH Trigger: GTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | CTCTGGCTTCTGGCGATGGGTGTCTGGAATTCAGCCTaGGTGCCTGGAATCCTCAAAGTACACTCCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LWLLAMGVWNSA*VPGILKVHSWF Trigger: AAACCAGGAGTGTACTTTGAGGATTCCAGGCACCCAGGCTGAATTCCAGACACCCATCGCCAGAAGCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | TCTCTCTTAGGCCTCTTCTCCTGGGGGTATGGATCCTaGGGGGAGATTGATCACCTCCATGCTTCCATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLGLFSWGYGS*GEIDHLHASIP Trigger: AGGAATGGAAGCATGGAGGTGATCAATCTCCCCCCAGGATCCATACCCCCAGGAGAAGAGGCCTAAGAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CAA 90 bp | TTTCCATCCACTGGCTCCTGGTTTTGGTGTATCTTCTGGTGGCGTTaGAGCTCAGACTGGTCCCGGAAGCTCTTCCCACACACAGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FPSTGSWFWCIFWWR*SSDWSRKLFPHTEH Trigger: ATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | GTACACTCCTGGTTTCCATCCACTGGCTCCTGGTTTTaGTGTATCTTCTGGTGGCGTTTGAGCTCAGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VHSWFPSTGSWF*CIFWWRLSSDW Trigger: CCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CAA 90 bp | CAGCTACCTCGCCCACCCATGGGAGCGTCTTCTGTACAGGTTCGATaGGCTTCAGCTGTTCAAACATCTTCTCTTCTGTGGTGTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QLPRPPMGASSVQVR*ASAVQTSSLLWCLF Trigger: AAAGAGACACCACAGAAGAGAAGATGTTTGAACAGCTGAAGCCAATCGAACCTGTACAGAAGACGCTCCCATGGGTGGGCGAGGTAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
||
| CDS GCA 72 bp | GGTCCTGGTCACAGGTGCTTGGTTCTTAAGTACAGATaGCTGGTTCTGGGCCATAGGACCCTCAGTTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GPGHRCLVLKYR*LVLGHRTLSSK Trigger: TTTAGAACTGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS CCA 72 bp | TTTTGGTGTATCTTCTGGTGGCGTTTGAGCTCAGACTaGTCCCGGAAGCTCTTCCCACACACAGAGCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: FWCIFWWRLSSD*SRKLFPHTEHE Trigger: TTCATGCTCTGTGTGTGGGAAGAGCTTCCGGGACCAGTCTGAGCTCAAACGCCACCAGAAGATACACCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS TCA 72 bp | CAAAGAACAATGGGGGCAACAGAAGACATTGAGTCTTaGGGGCTTCACTGGATGAGAGTTGGATCTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: QRTMGATEDIES*GLHWMRVGSGI Trigger: GATGCCAGATCCAACTCTCATCCAGTGAAGCCCTCAAGACTCAATGTCTTCTGTTGCCCCCATTGTTCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
||
| CDS GCA 72 bp | GGGAGATGGACAAACTCTCTCCACTGTTCCTCTTCTTaGTCAAGCTTGGTGATTAGCTCTGGCTTATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GRWTNSLHCSSS*SSLVISSGLCR Trigger: TCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGTTTGTCCATCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CCA 72 bp | TGGAATCCTCAAAGTACACTCCTGGTTTCCATCCACTaGCTCCTGGTTTTGGTGTATCTTCTGGTGGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: WNPQSTLLVSIH*LLVLVYLLVAF Trigger: AAACGCCACCAGAAGATACACCAAAACCAGGAGCCAGTGGATGGAAACCAGGAGTGTACTTTGAGGATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CCA 72 bp | CTGGTCACAGGTGCTTGGTTCTTAAGTACAGATGCCTaGTTCTGGGCCATAGGACCCTCAGTTCTAAATATG | + |
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Preference number: 6 (lower is better) Translates to: LVTGAWFLSTDA*FWAIGPSVLNM Trigger: CATATTTAGAACTGAGGGTCCTATGGCCCAGAACCAGGCATCTGTACTTAAGAACCAAGCACCTGTGACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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| CDS CAA 90 bp | GGGAGATGGACAAACTCTCTCCACTGTTCCTCTTCTTGCTCAAGCTaGGTGATTAGCTCTGGCTTATGCAGAAAGATTCTGGCCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: GRWTNSLHCSSSCSS*VISSGLCRKILATD Trigger: ATCTGTGGCCAGAATCTTTCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGTTTGTCCATCTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CAA 90 bp | AAGGCCATTTATTTATGTTTCAAGATGCTCACTGCCTCCTTTGTTTaGTCTCCTTTGCAGGCCTTCTCTCTTAGGCCTCTTCTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: KAIYLCFKMLTASFV*SPLQAFSLRPLLLG Trigger: CCCCAGGAGAAGAGGCCTAAGAGAGAAGGCCTGCAAAGGAGACAAAACAAAGGAGGCAGTGAGCATCTTGAAACATAAATAAATGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000432222.1 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS TCA 72 bp | ACTCTCTCCACTGTTCCTCTTCTTGCTCAAGCTTGGTaGTTAGCTCTGGCTTATGCAGAAAGATTCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TLSTVPLLAQAW*LALAYAERFWP Trigger: TGGCCAGAATCTTTCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS TCA 72 bp | TCTCTCTCCACTGTTCCTCTTCTTGCTCAAGCTTGGTaGTTAGCTCTGGCTTATGCAGAAAGATTCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLSTVPLLAQAW*LALAYAERFWP Trigger: TGGCCAGAATCTTTCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGAGGAACAGTGGAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000549501.2 ENST00000552898.2 ENST00000552987.2 |
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| CDS CCA 72 bp | TTCTTGCCTTCTGAAAGGCCTTCTGTGTTTGGGAGATaGACAAACTCTCTCCACTGTTCCTCTTCTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: FLPSERPSVFGR*TNSLHCSSSCS Trigger: TGAGCAAGAAGAGGAACAGTGGAGAGAGTTTGTCCATCTCCCAAACACAGAAGGCCTTTCAGAAGGCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CAA 72 bp | GCTCTTTCTTCTTGCCTTCTGAAAGGCCTTCTGTGTTaGGGAGATGGACAAACTCTCTCCACTGTTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: ALSSCLLKGLLC*GDGQTLSTVPL Trigger: AAGAGGAACAGTGGAGAGAGTTTGTCCATCTCCCAAACACAGAAGGCCTTTCAGAAGGCAAGAAGAAAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000552809.1 ENST00000553137.1 |
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| CDS CAA 72 bp | TTTTTGTTCTGCTGTCCAAATTCTCCTCTTCCACAATaGAGAACAATTTTGCTTCCCTCAAAGCTGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: FLFCCPNSPLPQ*RTILLPSKLGH Trigger: GTGGCCCAGCTTTGAGGGAAGCAAAATTGTTCTCAATTGTGGAAGAGGAGAATTTGGACAGCAGAACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 |
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| CDS GCA 72 bp | TCTTCTTGCTCAAGCTTGGTGATTAGCTCTGGCTTATaGAGAAAGATTCTGGCCACAGATGTTAGATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SSCSSLVISSGL*RKILATDVRFL Trigger: TAAGAATCTAACATCTGTGGCCAGAATCTTTCTGCATAAGCCAGAGCTAATCACCAAGCTTGAGCAAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000376883.2 ENST00000383628.6 ENST00000416974.5 ENST00000435906.5 ENST00000437216.5 ENST00000446005.5 ENST00000448114.5 ENST00000488757.6 ENST00000547542.2 ENST00000547911.2 ENST00000548001.2 ENST00000548337.1 ENST00000548574.1 ENST00000548769.1 ENST00000549167.1 ENST00000549501.2 ENST00000552809.1 ENST00000552898.2 ENST00000552987.2 ENST00000553137.1 |
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