RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP36 (Homo sapiens)

Ensembl gene IDs: ENSG00000128016

Ensembl transcript IDs: ENST00000594045.2, ENST00000594442.2, ENST00000597629.3, ENST00000652583.1

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCCAGCGGTGCGAAGCCAGGGGGTGGGGGCACCCAGCCACAGCTaGGGCCCTCCACTAGGCTGGTGGAGCGGCCAGGCAGGCGGGAGG +
Preference number: 1 (lower is better)
Translates to: EPAVRSQGVGAPSHS*GPPLGWWSGQAGGR
Trigger: CCTCCCGCCTGCCTGGCCGCTCCACCAGCCTAGTGGAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCCCTGGCTTCGCACCGCTGGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR CCA 90 bp GACATAGCTCAGTCTTGTAGCGCGAGGGGGTGGTGGAGGTTGCAGTaGGCGAAGTGGGTGAGGGTGACAGCTCAGGGCCCAGGCGGGGAG +
Preference number: 1 (lower is better)
Translates to: DIAQSCSARGWWRLQ*AKWVRVTAQGPGGE
Trigger: CTCCCCGCCTGGGCCCTGAGCTGTCACCCTCACCCACTTCGCCCACTGCAACCTCCACCACCCCCTCGCGCTACAAGACTGAGCTATGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR CCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATaGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGT +
Preference number: 1 (lower is better)
Translates to: IRINKVVINKGPIDL*VGFGNGFGYLLLEG
Trigger: ACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp TGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGCAAACTGGCACTCAGGCAGGCGGGAGGTaGCCCCAGACGGGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: WGGDWPGAARPGHGQTGTQAGGR*PQTGWS
Trigger: ACTCCAGCCCGTCTGGGGTCACCTCCCGCCTGCCTG...AGTGCCAGTTTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR-3UTR CCA 90 bp GTGCGAAGCCAGGGGGTGGGGGCACCCAGCCACAGCTGCGGCCCTCCACTAGGCGACTCAGTCCCTCCATaGTCGGATGGCACGGGCACG +
Preference number: 2 (lower is better)
Translates to: VRSQGVGAPSHSCGPPLGDSVPP*SDGTGT
Trigger: CGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTC...GCCTAGTGGAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCCCTGGCTTCGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR-3UTR CCA 90 bp CAAACTGGCACTTGGCCCCGTAGCGGCAGCGCCCACTCTCTGAGAAGGTCCGACCCCTCCATGGTCGGATaGCACGGGCACGTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: QTGTWPRSGSAHSLRRSDPSMVG*HGHVRA
Trigger: AGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGG...GTCGGACCTTCTCAGAGAGTGGGCGCTGCCGCTACGGGGCCAAGTGCCAGTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR-3UTR CCA 90 bp TCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGTGTAGCGCGAGGGGGTaGTGGAGGTTGCAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: SVLYLGWRLAWRSSPRPWCSARG*WRLQWA
Trigger: CGCCCACTGCAACCTCCACCACCCCCTCGCGCTACA...CCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR CAA 90 bp AGGTCCGACATAGCTCAGTCTTGTAGCGCGAGGGGGTGGTGGAGGTaGCAGTGGGCGAAGTGGGTGAGGGTGACAGCTCAGGGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RSDIAQSCSARGWWR*QWAKWVRVTAQGPG
Trigger: GCCTGGGCCCTGAGCTGTCACCCTCACCCACTTCGCCCACTGCAACCTCCACCACCCCCTCGCGCTACAAGACTGAGCTATGTCGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR-3UTR CCA 90 bp AGTTCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGTGGAGGTTGCAGTaGGCGAAGTGGGTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: SSVLYLGWRLAWRSSPRPWWRLQ*AKWVRV
Trigger: CACCCTCACCCACTTCGCCCACTGCAACCTCCACCA...TGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR-3UTR GCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGGCACACTTGGGGACCTaGCCCAGCGTGAGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQAHLGT*PSVRSG
Trigger: CCCTGACCTCACGCTGGGGCAGGTCCCCAAGTGTGC...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp TCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGCAATTGCAGTGGGCGAAGTaGGTGAGGGTGACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: SCIWGGDWPGAARPGHGQLQWAK*VRVTAQ
Trigger: CTGAGCTGTCACCCTCACCCACTTCGCCCACTGCAA...TTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR-3UTR TCA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACGGACCTGCCCCAGCGTaGGGTCAGGGGAGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDGPAPA*GQGSGL
Trigger: TAACCCACTCCCCTGACCTCACGCTGGGGCAGGTCC...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGACAGTGCAAGAGACGTaGCTCCCCGCTGAGATCCAG +
Preference number: 2 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQTVQET*LPAEIQ
Trigger: CTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTGT...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGACGTGGCTCCCCGCTaGGATCCAGCTGATCTGACC +
Preference number: 2 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPDVAPR*DPADLT
Trigger: GGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTC...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGCCGCTGAGATCCAGCTaGTCTGACCGGGCAGTCACT +
Preference number: 2 (lower is better)
Translates to: GPLIYGWGLATALATCFWPLRSS*SDRAVT
Trigger: AGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGG...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAAGTCCCCACAGCCCTaGGGTCCATGCAGAGACCAC +
Preference number: 2 (lower is better)
Translates to: GPLIYGWGLATALATCFWKSPQP*GPCRDH
Trigger: GTGGTCTCTGCATGGACCCCAGGGCTGTGGGGACTT...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCGGACCTGCCCCAGCGTaGGGTCAGGGGAGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGGPAPA*GQGSGL
Trigger: TAACCCACTCCCCTGACCTCACGCTGGGGCAGGTCC...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR GCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCCAGCCCTGGGGTCCATaGAGAGACCACAGTGCAAGA +
Preference number: 2 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGQPWGP*RDHSAR
Trigger: TCTTGCACTGTGGTCTCTGCATGGACCCCAGGGCTG...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCATCTAGGAGACAGATTTaGGCAGGGAAGAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPSRRQI*AGKRWG
Trigger: CCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGA...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGTCTAGGAGACAGATTTaGGCAGGGAAGAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: GPLIYGWGLATALATCFWSRRQI*AGKRWG
Trigger: CCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGA...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR GCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAACAGCCCTGGGGTCCATaGAGAGACCACAGTGCAAGA +
Preference number: 2 (lower is better)
Translates to: SYQETLEPQVYKNWRGSEQPWGP*RDHSAR
Trigger: TCTTGCACTGTGGTCTCTGCATGGACCCCAGGGCTG...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCAAGTCCCCACAGCCCTaGGGTCCATGCAGAGACCAC +
Preference number: 2 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGKSPQP*GPCRDH
Trigger: GTGGTCTCTGCATGGACCCCAGGGCTGTGGGGACTT...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAAACTGGAGGGGCAGTaGAGGCCTATTATTCACAGC +
Preference number: 2 (lower is better)
Translates to: GPLIYGWGLATALATCFWKLEGQ*RPIIHS
Trigger: GCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTT...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACCAGGTCTATAAAAACTaGAGGGGCAGTGAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDQVYKN*RGSEGL
Trigger: TAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR CAA 90 bp ATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTaGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: IDLWVGFGNGFGYLL*EGNLSTRIPPQERF
Trigger: GAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGGTGAGGTCAGGGGAGTaGGTTAATGCATTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: GPLIYGWGLATALATCFWVRSGE*VNAFWK
Trigger: TTTCCAGAATGCATTAACCCACTCCCCTGACCTCAC...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTACACCATCATGAATACTaGGCTTGCACACTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLHHHEY*ACTLGD
Trigger: GTCCCCAAGTGTGCAAGCTCAGTATTCATGATGGTG...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATAAACTGGAGGGGCAGTaGAGGCCTATTATTCACAGC +
Preference number: 2 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNKLEGQ*RPIIHS
Trigger: GCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTT...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGAGTGAGGTCAGGGGAGTaGGTTAATGCATTCTGGAAA +
Preference number: 2 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGVRSGE*VNAFWK
Trigger: TTTCCAGAATGCATTAACCCACTCCCCTGACCTCAC...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCCACCATCATGAATACTaGGCTTGCACACTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGHHHEY*ACTLGD
Trigger: GTCCCCAAGTGTGCAAGCTCAGTATTCATGATGGTG...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTTGGAGGGTAATTTaGGCACCAGGATTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGFWRVI*APGFPL
Trigger: GAGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAA...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR TCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGGACGTGGCTCCCCGCTaGGATCCAGCTGATCTGACC +
Preference number: 2 (lower is better)
Translates to: IRINKVVINKGPIDLWVGDVAPR*DPADLT
Trigger: GGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTC...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCCAGGTCTATAAAAACTaGAGGGGCAGTGAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGQVYKN*RGSEGL
Trigger: TAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGACAGTGCAAGAGACGTaGCTCCCCGCTGAGATCCAG +
Preference number: 2 (lower is better)
Translates to: IRINKVVINKGPIDLWVGTVQET*LPAEIQ
Trigger: CTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTGT...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGTGGGTTAATGCATTCTaGAAAAGGGGATTACTTGAT +
Preference number: 2 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKWVNAF*KRGLLD
Trigger: ATCAAGTAATCCCCTTTTCCAGAATGCATTAACCCA...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR CCA 72 bp CCAGCCTGGGCTGGACTCAGTCCCTCCATGGTCGGATaGCACGGGCACGTCAGGGCTCAGCGACAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: PAWAGLSPSMVG*HGHVRAQRQEA
Trigger: AGCCTCCTGTCGCTGAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCCAGCCCAGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594045.2
3UTR-3UTR CAA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAACTGAGCTTGCACACTaGGGGACCTGCCCCAGCGTG +
Preference number: 3 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPTELAH*GTCPSV
Trigger: CACGCTGGGGCAGGTCCCCAAGTGTGCAAGCTCAGT...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CAA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCACTGAGCTTGCACACTaGGGGACCTGCCCCAGCGTG +
Preference number: 3 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGTELAH*GTCPSV
Trigger: CACGCTGGGGCAGGTCCCCAAGTGTGCAAGCTCAGT...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CAA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTAGGGGGAGAGGGTTCATaGCCTCCCTTAAATATGCTA +
Preference number: 3 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLGGEGS*PPLNML
Trigger: TAGCATATTTAAGGGAGGCAATGAACCCTCTCCCCC...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR CCA 72 bp AATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATaGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTT +
Preference number: 3 (lower is better)
Translates to: NKVVINKGPIDL*VGFGNGFGYLL
Trigger: AAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR-3UTR CAA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGGGGGGAGAGGGTTCATaGCCTCCCTTAAATATGCTA +
Preference number: 3 (lower is better)
Translates to: IRINKVVINKGPIDLWVGGGEGS*PPLNML
Trigger: TAGCATATTTAAGGGAGGCAATGAACCCTCTCCCCC...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
41% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AGCCAGCGGTGCGAAGCCAGGGGGTGGGGGCACCCAGCCACAGCTGCGGCCCTCGGCCCTCCACTAGGCTaGTGGAGCGGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SQRCEARGWGHPATAAALGPPLG*WSGQAG
Trigger: GCCTGCCTGGCCGCTCCACCAGCCTAGTGGAGGGCC...GAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCCCTGGCTTCGCACCGCTGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR GCA 90 bp AGCCAGCGGTGCGAAGCCAGGGGGTGGGGGCACCCAGCCACAGCTGCGGCCCTCGTACCGGGGATGCCGTaGGGCGGGGACTCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SQRCEARGWGHPATAAALVPGMP*GGDSPR
Trigger: ACGAGGTGAGTCCCCGCCGCACGGCATCCCCGGTAC...GAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCCCTGGCTTCGCACCGCTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp GGGGTGGGGGCACCCAGCCACAGCTGCGGCCCTCCACTAGGCTGGTGGAGCGGCCCCTCCATGGTCGGATaGCACGGGCACGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GVGAPSHSCGPPLGWWSGPSMVG*HGHVRA
Trigger: AGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGG...GCCGCTCCACCAGCCTAGTGGAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp GTGCGAAGCCAGGGGGTGGGGGCACCCAGCCACAGCTGCGGCCCTCCACTAGGCATTTGGGGTGGCGATTaGCCTGGCGCAGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: VRSQGVGAPSHSCGPPLGIWGGD*PGAARP
Trigger: TGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAAT...GCCTAGTGGAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCCCTGGCTTCGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR TCA 90 bp CCTGGGCTGGACTCAGTCCCTCCATGGTCGGATGGCACGGGCACGTCAGGGCTCATCACCAAGCTGGTCTaGGCGGGAGGCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGLDSVPPWSDGTGTSGLITKLV*AGGRGP
Trigger: GGGGCCCCTGCCTCCCGCTCAGACCAGCTTGGTGAT...GAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCCAGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR GCA 90 bp CCTGGGCTGGACTCAGTCCCTCCATGGTCGGATGGCACGGGCACGTCAGGGCTCTGCAGGTACCGGGGATaGCGTGCGGCGGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: PGLDSVPPWSDGTGTSGLCRYRG*RAAGTH
Trigger: GTGAGTCCCCGCCGCACGGCATCCCCGGTACCTGCA...GAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCCAGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR GCA 90 bp GTGCGAAGCCAGGGGGTGGGGGCACCCAGCCACAGCTGCGGCCCTCCACTAGGCACTCGGACTCAGGCATaGAGGTACCGGGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: VRSQGVGAPSHSCGPPLGTRTQA*RYRGCR
Trigger: ACGGCATCCCCGGTACCTGCATGCCTGAGTCCGAGT...GCCTAGTGGAGGGCCGCAGCTGTGGCTGGGTGCCCCCACCCCCTGGCTTCGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp CGGGAGGTGACCCCAGACGGGCTGGAGTCGGAGGGGCTCAGGCTCCAGGGTCCCTGGTGGAGGTTGCAGTaGGCGAAGTGGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: REVTPDGLESEGLRLQGPWWRLQ*AKWVRV
Trigger: CACCCTCACCCACTTCGCCCACTGCAACCTCCACCA...GGGACCCTGGAGCCTGAGCCCCTCCGACTCCAGCCCGTCTGGGGTCACCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR TCA 90 bp TCCATGGTCGGATGGCACGGGCACGTCAGGGCTCAGCGACAGGAGGCTCTCCAACAGGCAGGCGGGAGGTaGCCCCAGACGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SMVGWHGHVRAQRQEALQQAGGR*PQTGWS
Trigger: ACTCCAGCCCGTCTGGGGTCACCTCCCGCCTGCCTG...TTGGAGAGCCTCCTGTCGCTGAGCCCTGACGTGCCCGTGCCATCCGACCATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR GCA 90 bp CCTGGGCTGGACTCAGTCCCTCCATGGTCGGATGGCACGGGCACGTCAGGGCTCTCCCGGGCTGGAGTTTaGGGCGCTAGAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGLDSVPPWSDGTGTSGLSRAGV*GAREVG
Trigger: CCCCACCTCTCTAGCGCCGCAAACTCCAGCCCGGGA...GAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCCAGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp TCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGGGTGGCGATTGGCCTaGCGCAGCTCGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SVLYLGWRLAWRSSPRPWGWRLA*RSSPRP
Trigger: TGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCC...CCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp AGTTCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCACCTCCACTAGGCTGGTaGAGCGGCCAGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSVLYLGWRLAWRSSPRPPPLGW*SGQAGG
Trigger: CCCGCCTGCCTGGCCGCTCCACCAGCCTAGTGGAGG...TGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp GGACTCAGTCCCTCCATGGTCGGATGGCACGGGCACGTCAGGGCTCAGCGACAGTGTAGCGCGAGGGGGTaGTGGAGGTTGCAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLSPSMVGWHGHVRAQRQCSARG*WRLQWA
Trigger: CGCCCACTGCAACCTCCACCACCCCCTCGCGCTACA...CTGTCGCTGAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp TCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGGGCAAACTGGCACTTaGCCCCGTAGCGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SVLYLGWRLAWRSSPRPWGQTGT*PRSGSA
Trigger: GGCGCTGCCGCTACGGGGCCAAGTGCCAGTTTGCCC...CCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp TGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGCAAACTGGCACTGCGGCGCTAGAGAGGTaGGGACTCGGACTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: WGGDWPGAARPGHGQTGTAALER*GLGLRH
Trigger: ATGCCTGAGTCCGAGTCCCCACCTCTCTAGCGCCGC...AGTGCCAGTTTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp CTGGGCTGGACTCAGTCCCTCCATGGTCGGATGGCACGGGCACGTCAGGGCTCAGACTCAGTCCCTCCATaGTCGGATGGCACGGGCACG +
Preference number: 4 (lower is better)
Translates to: LGWTQSLHGRMARARQGSDSVPP*SDGTGT
Trigger: CGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTC...TGAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCCAGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp AGTTCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCAAGCTCGCCCAGGCCATaGGCAAACTGGCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSVLYLGWRLAWRSSPRPSSPRP*ANWHLA
Trigger: GGCCAAGTGCCAGTTTGCCCATGGCCTGGGCGAGCT...TGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp TCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGCTAGGGAGCCCCAGTTaGAGAAGGGAGGCAAGCGTC +
Preference number: 4 (lower is better)
Translates to: SVLYLGWRLAWRSSPRPWLGSPS*RREASV
Trigger: GACGCTTGCCTCCCTTCTCCAACTGGGGCTCCCTAG...CCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp CTGGGCTGGACTCAGTCCCTCCATGGTCGGATGGCACGGGCACGTCAGGGCTCAGTCTTGTATTTGGGGTaGCGATTGGCCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGWTQSLHGRMARARQGSVLYLG*RLAWRS
Trigger: GCTGCGCCAGGCCAATCGCCACCCCAAATACAAGAC...TGAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCCAGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp TCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGTTGCAGTGGGCGAAGTaGGTGAGGGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SVLYLGWRLAWRSSPRPWLQWAK*VRVTAQ
Trigger: CTGAGCTGTCACCCTCACCCACTTCGCCCACTGCAA...CCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR TCA 90 bp CCCCGTAGCGGCAGCGCCCACTCTCTGAGAAGGTCCGACATAGCTCAGTCTTGTTGTAACGGTTGGCCATaGGGGGTGTCGGCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: PRSGSAHSLRRSDIAQSCCNGWP*GVSAES
Trigger: ACTCTCGGCCGACACCCCTCATGGCCAACCGTTACA...ACAAGACTGAGCTATGTCGGACCTTCTCAGAGAGTGGGCGCTGCCGCTACGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGAGGGCGAGAAGGAGCTaGAGGACAGGGAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQRARRS*RTGKGR
Trigger: CCGGCCCTTCCCTGTCCTCCAGCTCCTTCTCGCCCT...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGGGGGCTGCCACGGGCTaGGGTGGTGCAAAAACTCCC +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQGAATG*GGAKTP
Trigger: GGGAGTTTTTGCACCACCCCAGCCCGTGGCAGCCCC...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR CAA 72 bp ATAGCTCAGTCTTGTAGCGCGAGGGGGTGGTGGAGGTaGCAGTGGGCGAAGTGGGTGAGGGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: IAQSCSARGWWR*QWAKWVRVTAQ
Trigger: CTGAGCTGTCACCCTCACCCACTTCGCCCACTGCAACCTCCACCACCCCCTCGCGCTACAAGACTGAGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCGGCCCTCCACTAGGCTaGTGGAGCGGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGGPPLG*WSGQAG
Trigger: GCCTGCCTGGCCGCTCCACCAGCCTAGTGGAGGGCC...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACGGGCAAACTGGCACTTaGCCCCGTAGCGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDGQTGT*PRSGSA
Trigger: GGCGCTGCCGCTACGGGGCCAAGTGCCAGTTTGCCC...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CCCCGTAGCGGCAGCGCCCACTCTCTGAGAAGGTCCGACATAGCTCAGTCTTGTTCCAAATCACCAAGCTaGTCTGAGCGGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRSGSAHSLRRSDIAQSCSKSPS*SEREAG
Trigger: CCCTGCCTCCCGCTCAGACCAGCTTGGTGATTTGGA...ACAAGACTGAGCTATGTCGGACCTTCTCAGAGAGTGGGCGCTGCCGCTACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp TCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGCAAGTTCCGTCTTGTATTTaGGGTGGCGATTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCIWGGDWPGAARPGHGQVPSCI*GGDWPG
Trigger: GCCAGGCCAATCGCCACCCCAAATACAAGACGGAAC...TTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGGGCAACAGACTGGGGTaGGGTCTCTTCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQGNRLG*GLFEPG
Trigger: CCCTGGCTCGAAGAGACCCCACCCCAGTCTGTTGCC...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGCCGCTGAGATCCAGCTaGTCTGACCGGGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQPLRSS*SDRAVT
Trigger: AGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGG...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACCCCTCCATGGTCGGATaGCACGGGCACGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDPSMVG*HGHVRA
Trigger: AGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGG...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCGGGCAAACTGGCACTTaGCCCCGTAGCGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGGQTGT*PRSGSA
Trigger: GGCGCTGCCGCTACGGGGCCAAGTGCCAGTTTGCCC...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACGACGTGGCTCCCCGCTaGGATCCAGCTGATCTGACC +
Preference number: 4 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDDVAPR*DPADLT
Trigger: GGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTC...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR GCA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGCACACTTGGGGACCTaGCCCAGCGTGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPAHLGT*PSVRSG
Trigger: CCCTGACCTCACGCTGGGGCAGGTCCCCAAGTGTGC...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATGGCCCTCCACTAGGCTaGTGGAGCGGCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNGPPLG*WSGQAG
Trigger: GCCTGCCTGGCCGCTCCACCAGCCTAGTGGAGGGCC...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCCAGGCAGGCGGGAGGTaGCCCCAGACGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGQAGGR*PQTGWS
Trigger: ACTCCAGCCCGTCTGGGGTCACCTCCCGCCTGCCTG...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCGCAGGCCGGAGAAGCTaGTGCTCTGGCGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGAGRRS*CSGEAQ
Trigger: CTGTGCTTCGCCAGAGCATCAGCTTCTCCGGCCTGC...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGAAACAGAGATGCGATTaGAGATGGGGAGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQKQRCD*RWGVAG
Trigger: CCCGGCGACTCCCCATCTTCAATCGCATCTCTGTTT...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCGACGTGGCTCCCCGCTaGGATCCAGCTGATCTGACC +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGDVAPR*DPADLT
Trigger: GGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTC...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGAGGACCTGCCCCAGCGTaGGGTCAGGGGAGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGGPAPA*GQGSGL
Trigger: TAACCCACTCCCCTGACCTCACGCTGGGGCAGGTCC...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGACTCAGTCCCTCCATaGTCGGATGGCACGGGCACG +
Preference number: 4 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPDSVPP*SDGTGT
Trigger: CGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTC...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGATGTAGCGCGAGGGGGTaGTGGAGGTTGCAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGCSARG*WRLQWA
Trigger: CGCCCACTGCAACCTCCACCACCCCCTCGCGCTACA...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAATTTGGGGTGGCGATTaGCCTGGCGCAGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPIWGGD*PGAARP
Trigger: TGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAAT...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CCCCGTAGCGGCAGCGCCCACTCTCTGAGAAGGTCCGACATAGCTCAGTCTTGTGACTCACCTCGTAGATaGCAGTCAGATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: PRSGSAHSLRRSDIAQSCDSPRR*QSDPWC
Trigger: ACACCATGGATCTGACTGCCATCTACGAGGTGAGTC...ACAAGACTGAGCTATGTCGGACCTTCTCAGAGAGTGGGCGCTGCCGCTACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTTCCGTCTTGTATTTaGGGTGGCGATTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQVPSCI*GGDWPG
Trigger: GCCAGGCCAATCGCCACCCCAAATACAAGACGGAAC...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCGGCAACAGACTGGGGTaGGGTCTCTTCGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGGNRLG*GLFEPG
Trigger: CCCTGGCTCGAAGAGACCCCACCCCAGTCTGTTGCC...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGTCTAGGAGACAGATTTaGGCAGGGAAGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQSRRQI*AGKRWG
Trigger: CCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGA...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGCAGGCAGGCGGGAGGTaGCCCCAGACGGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKQAGGR*PQTGWS
Trigger: ACTCCAGCCCGTCTGGGGTCACCTCCCGCCTGCCTG...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGTGTAACGGTTGGCCATaGGGGGTGTCGGCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: GPLIYGWGLATALATCFWCNGWP*GVSAES
Trigger: ACTCTCGGCCGACACCCCTCATGGCCAACCGTTACA...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATGGACCTGCCCCAGCGTaGGGTCAGGGGAGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNGPAPA*GQGSGL
Trigger: TAACCCACTCCCCTGACCTCACGCTGGGGCAGGTCC...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACTTGCAGTGGGCGAAGTaGGTGAGGGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDLQWAK*VRVTAQ
Trigger: CTGAGCTGTCACCCTCACCCACTTCGCCCACTGCAA...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGGGGTGGCGATTGGCCTaGCGCAGCTCGCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKGWRLA*RSSPRP
Trigger: TGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCC...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGTCTTCGCTAGGGTTGTaGATGAAGTGGCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQSSLGL*MKWQRE
Trigger: CTCTCGCTGCCACTTCATCCACAACCCTAGCGAAGA...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGCGAAGCACAGGAGGGTaGCCCGGGGCCGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKRSTGG*PGAARS
Trigger: AGACCTGGCGGCCCCGGGCCACCCTCCTGTGCTTCG...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR GCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGCAGCCCTGGGGTCCATaGAGAGACCACAGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: GPLIYGWGLATALATCFWQPWGP*RDHSAR
Trigger: TCTTGCACTGTGGTCTCTGCATGGACCCCAGGGCTG...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTGTAGCGCGAGGGGGTaGTGGAGGTTGCAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGCSARG*WRLQWA
Trigger: CGCCCACTGCAACCTCCACCACCCCCTCGCGCTACA...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAAGCTCGCCCAGGCCATaGGCAAACTGGCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: SYQETLEPQVYKNWRGSESSPRP*ANWHLA
Trigger: GGCCAAGTGCCAGTTTGCCCATGGCCTGGGCGAGCT...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATAGCTCGCCCAGGCCATaGGCAAACTGGCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNSSPRP*ANWHLA
Trigger: GGCCAAGTGCCAGTTTGCCCATGGCCTGGGCGAGCT...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATATTTGGGGTGGCGATTaGCCTGGCGCAGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNIWGGD*PGAARP
Trigger: TGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAAT...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGGAGAAGCTGATGCTCTaGCGAAGCACAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GPLIYGWGLATALATCFWEKLML*RSTGGW
Trigger: CCACCCTCCTGTGCTTCGCCAGAGCATCAGCTTCTC...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCAGGGCGAGAAGGAGCTaGAGGACAGGGAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGRARRS*RTGKGR
Trigger: CCGGCCCTTCCCTGTCCTCCAGCTCCTTCTCGCCCT...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATGGAGGGGCAACAGACTaGGGTGGGGTCTCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNGGATD*GGVSSS
Trigger: GCTCGAAGAGACCCCACCCCAGTCTGTTGCCCCTCC...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAATGCCACGGGCTGGGGTaGTGCAAAAACTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SYQETLEPQVYKNWRGSECHGLG*CKNSRL
Trigger: GAGGCGGGAGTTTTTGCACCACCCCAGCCCGTGGCA...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCGGGGCTGCCACGGGCTaGGGTGGTGCAAAAACTCCC +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGGAATG*GGAKTP
Trigger: GGGAGTTTTTGCACCACCCCAGCCCGTGGCAGCCCC...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR CAA 72 bp GGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATTaGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GNGFGYLLLEGN*STRIPPQERFQ
Trigger: CTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
3UTR CAA 72 bp TGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTaGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WVGFGNGFGYLL*EGNLSTRIPPQ
Trigger: CTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAACCGCTGAGATCCAGCTaGTCTGACCGGGCAGTCACT +
Preference number: 4 (lower is better)
Translates to: SYQETLEPQVYKNWRGSEPLRSS*SDRAVT
Trigger: AGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGG...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR GCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGACCAGGCTGCTGCCGCTaGTGGCATATTCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGPGCCR*WHIHQG
Trigger: ACCCTGATGAATATGCCAGCAGCGGCAGCAGCCTGG...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR GCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAACACGGGCTGGGGTGGTaGAAAAACTCCCGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: SYQETLEPQVYKNWRGSEHGLGW*KNSRLE
Trigger: TTCGAGGCGGGAGTTTTTGCACCACCCCAGCCCGTG...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR GCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGACAGCCCTGGGGTCCATaGAGAGACCACAGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGQPWGP*RDHSAR
Trigger: TCTTGCACTGTGGTCTCTGCATGGACCCCAGGGCTG...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATGGTGGAGGTTGCAGTaGGCGAAGTGGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLWWRLQ*AKWVRV
Trigger: CACCCTCACCCACTTCGCCCACTGCAACCTCCACCA...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGAGTCTTGTATTTGGGGTaGCGATTGGCCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGVLYLG*RLAWRS
Trigger: GCTGCGCCAGGCCAATCGCCACCCCAAATACAAGAC...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTAGGCTGCTGCCGCTGCTaGCATATTCATCAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLGCCRC*HIHQGR
Trigger: CCGACCCTGATGAATATGCCAGCAGCGGCAGCAGCC...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATAAGTCCCCACAGCCCTaGGGTCCATGCAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNKSPQP*GPCRDH
Trigger: GTGGTCTCTGCATGGACCCCAGGGCTGTGGGGACTT...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGGCCCATTGATTTATaGGTGGGGTTTGGCAACGGC +
Preference number: 4 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPGPIDL*VGFGNG
Trigger: GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCC...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGAGAGATCCAGCTGATCTaGCCGGGCAGTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGEIQLI*PGSHFV
Trigger: GACAAAGTGACTGCCCGGTCAGATCAGCTGGATCTC...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR GCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCCACGGGCTGGGGTGGTaGAAAAACTCCCGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGHGLGW*KNSRLE
Trigger: TTCGAGGCGGGAGTTTTTGCACCACCCCAGCCCGTG...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGTCTTGTATTTGGGGTaGCGATTGGCCTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SYQETLEPQVYKNWRGSEVLYLG*RLAWRS
Trigger: GCTGCGCCAGGCCAATCGCCACCCCAAATACAAGAC...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGGGAGGCTCTCGTAGATaGCAGTCAGATCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: GPLIYGWGLATALATCFWGGSRR*QSDPWC
Trigger: ACACCATGGATCTGACTGCCATCTACGAGAGCCTCC...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCTCTTCGCTAGGGTTGTaGATGAAGTGGCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGSSLGL*MKWQRE
Trigger: CTCTCGCTGCCACTTCATCCACAACCCTAGCGAAGA...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATGAGAAGCTGATGCTCTaGCGAAGCACAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNEKLML*RSTGGW
Trigger: CCACCCTCCTGTGCTTCGCCAGAGCATCAGCTTCTC...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGGGAGGGGCAACAGACTaGGGTGGGGTCTCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKGGATD*GGVSSS
Trigger: GCTCGAAGAGACCCCACCCCAGTCTGTTGCCCCTCC...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCGGCTGCTGCCGCTGCTaGCATATTCATCAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGGCCRC*HIHQGR
Trigger: CCGACCCTGATGAATATGCCAGCAGCGGCAGCAGCC...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATACAGTGCAAGAGACGTaGCTCCCCGCTGAGATCCAG +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNTVQET*LPAEIQ
Trigger: CTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTGT...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCTTTTGGAGGGTAATTTaGGCACCAGGATTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGFWRVI*APGFPL
Trigger: GAGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAA...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGTGGTGGAGGTTGCAGTaGGCGAAGTGGGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKWWRLQ*AKWVRV
Trigger: CACCCTCACCCACTTCGCCCACTGCAACCTCCACCA...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGAAGTCCCCACAGCCCTaGGGTCCATGCAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKKSPQP*GPCRDH
Trigger: GTGGTCTCTGCATGGACCCCAGGGCTGTGGGGACTT...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAATCTAGGAGACAGATTTaGGCAGGGAAGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SYQETLEPQVYKNWRGSESRRQI*AGKRWG
Trigger: CCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGA...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCGTTTGGCAACGGCTTTaGCTACTTGCTTTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGVWQRL*LLAFGG
Trigger: CCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAAC...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTAGGGCCCATTGATTTATaGGTGGGGTTTGGCAACGGC +
Preference number: 4 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLGPIDL*VGFGNG
Trigger: GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCC...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCGAGATCCAGCTGATCTaGCCGGGCAGTCACTTTGTC +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGEIQLI*PGSHFV
Trigger: GACAAAGTGACTGCCCGGTCAGATCAGCTGGATCTC...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGCCTCCACTAGGCTGGTaGAGCGGCCAGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: IRINKVVINKGPIDLWVGPPLGW*SGQAGG
Trigger: CCCGCCTGCCTGGCCGCTCCACCAGCCTAGTGGAGG...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCGTTCCGTCTTGTATTTaGGGTGGCGATTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGVPSCI*GGDWPG
Trigger: GCCAGGCCAATCGCCACCCCAAATACAAGACGGAAC...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGACAGTGCAAGAGACGTaGCTCCCCGCTGAGATCCAG +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKTVQET*LPAEIQ
Trigger: CTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTGT...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCGTGAGGTCAGGGGAGTaGGTTAATGCATTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGVRSGE*VNAFWK
Trigger: TTTCCAGAATGCATTAACCCACTCCCCTGACCTCAC...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGTTTATGGGTGGGGTTTaGCAACGGCTTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: GPLIYGWGLATALATCFWFMGGV*QRLWLL
Trigger: AAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAA...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGAAACAGAGATGCGATTaGAGATGGGGAGTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKKQRCD*RWGVAG
Trigger: CCCGGCGACTCCCCATCTTCAATCGCATCTCTGTTT...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAATTTTGGAGGGTAATTTaGGCACCAGGATTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SYQETLEPQVYKNWRGSEFWRVI*APGFPL
Trigger: GAGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAA...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACACTGGAACCTCAGTGGGTTAATGCATTCTaGAAAAGGGGATTACTTGAT +
Preference number: 4 (lower is better)
Translates to: PGFPLRRGSSYQETLEPQWVNAF*KRGLLD
Trigger: ATCAAGTAATCCCCTTTTCCAGAATGCATTAACCCA...CTGAGGTTCCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACGTTACCAGGAGACACTaGAACCTCAGGTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDVTRRH*NLRSIK
Trigger: TTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAAC...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGATTTATGGGTGGGGTTTaGCAACGGCTTTGGCTACTT +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGFMGGV*QRLWLL
Trigger: AAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAA...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR GCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGGCACACTTGGGGACCTaGCCCAGCGTGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: IRINKVVINKGPIDLWVGAHLGT*PSVRSG
Trigger: CCCTGACCTCACGCTGGGGCAGGTCCCCAAGTGTGC...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGCCCTCCATGGTCGGATaGCACGGGCACGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IRINKVVINKGPIDLWVGPSMVG*HGHVRA
Trigger: AGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGG...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATCAGGTCTATAAAAACTaGAGGGGCAGTGAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNQVYKN*RGSEGL
Trigger: TAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATCCATTGATTTATGGGTaGGGTTTGGCAACGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNPLIYG*GLATAL
Trigger: CAAAGCCGTTGCCAAACCCCACCCATAAATCAATGG...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGGCAGGCCGGAGAAGCTaGTGCTCTGGCGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: IRINKVVINKGPIDLWVGAGRRS*CSGEAQ
Trigger: CTGTGCTTCGCCAGAGCATCAGCTTCTCCGGCCTGC...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGCACCATCATGAATACTaGGCTTGCACACTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKHHHEY*ACTLGD
Trigger: GTCCCCAAGTGTGCAAGCTCAGTATTCATGATGGTG...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR TCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGAAACTGGAGGGGCAGTaGAGGCCTATTATTCACAGC +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKKLEGQ*RPIIHS
Trigger: GCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTT...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTGCCACGGGCTGGGGTaGTGCAAAAACTCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: IRINKVVINKGPIDLWVGCHGLG*CKNSRL
Trigger: GAGGCGGGAGTTTTTGCACCACCCCAGCCCGTGGCA...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGAGTTACCAGGAGACACTaGAACCTCAGGTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGVTRRH*NLRSIK
Trigger: TTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAAC...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGGTTTGGCAACGGCTTTaGCTACTTGCTTTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKVWQRL*LLAFGG
Trigger: CCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAAC...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCATGGGTTAATGCATTCTaGAAAAGGGGATTACTTGAT +
Preference number: 4 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPWVNAF*KRGLLD
Trigger: ATCAAGTAATCCCCTTTTCCAGAATGCATTAACCCA...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGCAGGTCTATAAAAACTaGAGGGGCAGTGAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKQVYKN*RGSEGL
Trigger: TAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGCCATTGATTTATGGGTaGGGTTTGGCAACGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKPLIYG*GLATAL
Trigger: CAAAGCCGTTGCCAAACCCCACCCATAAATCAATGG...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTGCAGTGGGCGAAGTaGGTGAGGGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: IRINKVVINKGPIDLWVGLQWAK*VRVTAQ
Trigger: CTGAGCTGTCACCCTCACCCACTTCGCCCACTGCAA...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CCA 90 bp ATTAGAATAAATAAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGGTGAGGTCAGGGGAGTaGGTTAATGCATTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: IRINKVVINKGPIDLWVGVRSGE*VNAFWK
Trigger: TTTCCAGAATGCATTAACCCACTCCCCTGACCTCAC...CCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTTATTTATTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS TCA 90 bp GTGGTGGTGGTGAGGTCCGGCGGCCAGAGGGCAGGCCGGAGAAGCTaGTGCTCTGGCGAAGCACAGGAGGGTGGCCCGGGGCCGCCAGGT +
Preference number: 5 (lower is better)
Translates to: VVVVRSGGQRAGRRS*CSGEAQEGGPGPPG
Trigger: ACCTGGCGGCCCCGGGCCACCCTCCTGTGCTTCGCCAGAGCATCAGCTTCTCCGGCCTGCCCTCTGGCCGCCGGACCTCACCACCACCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS TCA 90 bp GGAGCTGGAGGACAGGGAAGGGCCGGCCAGGCCTGGTGGTGGTGGTaGGGTCCGGCGGCCAGAGGGCAGGCCGGAGAAGCTGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: GAGGQGRAGQAWWWW*GPAARGQAGEADAL
Trigger: CAGAGCATCAGCTTCTCCGGCCTGCCCTCTGGCCGCCGGACCTCACCACCACCACCAGGCCTGGCCGGCCCTTCCCTGTCCTCCAGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS CCA 90 bp GGTGAGGTCCGGCGGCCAGAGGGCAGGCCGGAGAAGCTGATGCTCTaGCGAAGCACAGGAGGGTGGCCCGGGGCCGCCAGGTCTTCGCTA +
Preference number: 5 (lower is better)
Translates to: GEVRRPEGRPEKLML*RSTGGWPGAARSSL
Trigger: TAGCGAAGACCTGGCGGCCCCGGGCCACCCTCCTGTGCTTCGCCAGAGCATCAGCTTCTCCGGCCTGCCCTCTGGCCGCCGGACCTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS CCA 90 bp AAGGGAGGCAAGCGTCCCGGGCTGGAGTTTGCGGCGCTAGAGAGGTaGGGACTCGGACTCAGGCATGCAGGTACCGGGGATGCCGTGCGG +
Preference number: 5 (lower is better)
Translates to: KGGKRPGLEFAALER*GLGLRHAGTGDAVR
Trigger: CCGCACGGCATCCCCGGTACCTGCATGCCTGAGTCCGAGTCCCCACCTCTCTAGCGCCGCAAACTCCAGCCCGGGACGCTTGCCTCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS CCA 90 bp GAGGGCAGGCCGGAGAAGCTGATGCTCTGGCGAAGCACAGGAGGGTaGCCCGGGGCCGCCAGGTCTTCGCTAGGGTTGTGGATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: EGRPEKLMLWRSTGG*PGAARSSLGLWMKW
Trigger: CCACTTCATCCACAACCCTAGCGAAGACCTGGCGGCCCCGGGCCACCCTCCTGTGCTTCGCCAGAGCATCAGCTTCTCCGGCCTGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS GCA 90 bp GGAGCCCCAGTTGGAGAAGGGAGGCAAGCGTCCCGGGCTGGAGTTTaGGGCGCTAGAGAGGTGGGGACTCGGACTCAGGCATGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GAPVGEGRQASRAGV*GAREVGTRTQACRY
Trigger: GTACCTGCATGCCTGAGTCCGAGTCCCCACCTCTCTAGCGCCGCAAACTCCAGCCCGGGACGCTTGCCTCCCTTCTCCAACTGGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS-3UTR CAA 90 bp TCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGCAATATTTGGGGTGGCGATaGGCCTGGCGCAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: SCIWGGDWPGAARPGHGQYLGWR*AWRSSP
Trigger: GGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATA...TTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS CCA 90 bp AGCGGCCCTGGAGGTAGAACTTGTGACAGAGTTCCGTCTTGTATTTaGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: SGPGGRTCDRVPSCI*GGDWPGAARPGHGQ
Trigger: TTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGAACTCTGTCACAAGTTCTACCTCCAGGGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS-3UTR CAA 90 bp TCCGTCTTGTATTTGGGGTGGCGATTGGCCTGGCGCAGCTCGCCCAGGCCATGGAGTTCCGTCTTGTATTaGGGGTGGCGATTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SVLYLGWRLAWRSSPRPWSSVLY*GWRLAW
Trigger: CCAGGCCAATCGCCACCCCAAATACAAGACGGAACT...CCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATACAAGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS TCA 90 bp TGGGGTCCATGCAGAGACCACAGTGCAAGAGACGTGGCTCCCCGCTaGGATCCAGCTGATCTGACCGGGCAGTCACTTTGTCACTCAGAA +
Preference number: 5 (lower is better)
Translates to: WGPCRDHSARDVAPR*DPADLTGQSLCHSE
Trigger: TTCTGAGTGACAAAGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTGTGGTCTCTGCATGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS-3UTR CAA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCTATTTGGGGTGGCGATaGGCCTGGCGCAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGYLGWR*AWRSSP
Trigger: GGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATA...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS TCA 90 bp CAGAGACCACAGTGCAAGAGACGTGGCTCCCCGCTGAGATCCAGCTaGTCTGACCGGGCAGTCACTTTGTCACTCAGAAACAGAGATGCG +
Preference number: 5 (lower is better)
Translates to: QRPQCKRRGSPLRSS*SDRAVTLSLRNRDA
Trigger: CGCATCTCTGTTTCTGAGTGACAAAGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTGTGGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS-3UTR CAA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGACTGAGCTTGCACACTaGGGGACCTGCCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: GPLIYGWGLATALATCFWTELAH*GTCPSV
Trigger: CACGCTGGGGCAGGTCCCCAAGTGTGCAAGCTCAGT...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAATATTTGGGGTGGCGATaGGCCTGGCGCAGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: SYQETLEPQVYKNWRGSEYLGWR*AWRSSP
Trigger: GGGCGAGCTGCGCCAGGCCAATCGCCACCCCAAATA...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp AGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAACTGAGCTTGCACACTaGGGGACCTGCCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SYQETLEPQVYKNWRGSETELAH*GTCPSV
Trigger: CACGCTGGGGCAGGTCCCCAAGTGTGCAAGCTCAGT...TTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp TTGGAGGGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAAGTTCCGTCTTGTATTaGGGGTGGCGATTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LEGNLSTRIPPQERFQLPSSVLY*GWRLAW
Trigger: CCAGGCCAATCGCCACCCCAAATACAAGACGGAACT...TGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGGTCTTCGCTAGGGTaGTGGATGAAGTGGCAGCGA +
Preference number: 5 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGRSSLG*WMKWQR
Trigger: TCGCTGCCACTTCATCCACAACCCTAGCGAAGACCT...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGGAAACAGAGATGCGATaGAAGATGGGGAGTCGCCGG +
Preference number: 5 (lower is better)
Translates to: GPLIYGWGLATALATCFWETEMR*KMGSRR
Trigger: CCGGCGACTCCCCATCTTCAATCGCATCTCTGTTTC...CCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATCAATGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACGACCGGGCAGTCACTTaGTCACTCAGAAACAGAGAT +
Preference number: 5 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDDRAVT*SLRNRD
Trigger: ATCTCTGTTTCTGAGTGACAAAGTGACTGCCCGGTC...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GGTAATTTGAGCACCAGGATTCCCCCTCAGGAGAGGTTCCAGTTACCAGGAGACGGGGGAGAGGGTTCATaGCCTCCCTTAAATATGCTA +
Preference number: 5 (lower is better)
Translates to: GNLSTRIPPQERFQLPGDGGEGS*PPLNML
Trigger: TAGCATATTTAAGGGAGGCAATGAACCCTCTCCCCC...GTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCTCAAATTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTAAGGTCTTCGCTAGGGTaGTGGATGAAGTGGCAGCGA +
Preference number: 5 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLRSSLG*WMKWQR
Trigger: TCGCTGCCACTTCATCCACAACCCTAGCGAAGACCT...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATGAAACAGAGATGCGATaGAAGATGGGGAGTCGCCGG +
Preference number: 5 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNETEMR*KMGSRR
Trigger: CCGGCGACTCCCCATCTTCAATCGCATCTCTGTTTC...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGAGGTTTGGCAACGGCTTaGGCTACTTGCTTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGGLATA*ATCFWR
Trigger: CCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACC...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GGTTCCAGTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCATTTATGGGTGGGGTTaGGCAACGGCTTTGGCTACT +
Preference number: 5 (lower is better)
Translates to: GSSYQETLEPQVYKNWRGIYGWG*ATALAT
Trigger: AGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAAT...GCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTCCTGGTAACTGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTAGGTTTGGCAACGGCTTaGGCTACTTGCTTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLGLATA*ATCFWR
Trigger: CCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACC...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GATTTATGGGTGGGGTTTGGCAACGGCTTTGGCTACTTGCTTTTGGAGGGTAATGACCGGGCAGTCACTTaGTCACTCAGAAACAGAGAT +
Preference number: 5 (lower is better)
Translates to: DLWVGFGNGFGYLLLEGNDRAVT*SLRNRD
Trigger: ATCTCTGTTTCTGAGTGACAAAGTGACTGCCCGGTC...ATTACCCTCCAAAAGCAAGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCGGGGGAGAGGGTTCATaGCCTCCCTTAAATATGCTA +
Preference number: 5 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGGGEGS*PPLNML
Trigger: TAGCATATTTAAGGGAGGCAATGAACCCTCTCCCCC...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCCTTTTGGAGGGTAATTaGAGCACCAGGATTCCCCCT +
Preference number: 5 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGLLEGN*STRIPP
Trigger: AGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAAG...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp TTCACAGCACATAAGATTCTAGGAGACAGATTTGGGCAGGGAAGAGGTGGGGGATTTGGCTACTTGCTTTaGGAGGGTAATTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: FTAHKILGDRFGQGRGGGFGYLL*EGNLST
Trigger: GGTGCTCAAATTACCCTCCAAAAGCAAGTAGCCAAA...TCCCCCACCTCTTCCCTGCCCAAATCTGTCTCCTAGAATCTTATGTGCTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp AAAGTCGTCATAAATAAAGGGCCCATTGATTTATGGGTGGGGTTTGGCAACGGCATTTATGGGTGGGGTTaGGCAACGGCTTTGGCTACT +
Preference number: 5 (lower is better)
Translates to: KVVINKGPIDLWVGFGNGIYGWG*ATALAT
Trigger: AGTAGCCAAAGCCGTTGCCAAACCCCACCCATAAAT...GCCGTTGCCAAACCCCACCCATAAATCAATGGGCCCTTTATTTATGACGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp CAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTCACAGCACATAAGCTTTTGGAGGGTAATTaGAGCACCAGGATTCCCCCT +
Preference number: 5 (lower is better)
Translates to: QVYKNWRGSEGLLFTAHKLLEGN*STRIPP
Trigger: AGGGGGAATCCTGGTGCTCAAATTACCCTCCAAAAG...CTTATGTGCTGTGAATAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS-3UTR CAA 90 bp GAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGTGAAGGCCTATTATTTGGCTACTTGCTTTaGGAGGGTAATTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: ETLEPQVYKNWRGSEGLLFGYLL*EGNLST
Trigger: GGTGCTCAAATTACCCTCCAAAAGCAAGTAGCCAAA...TAATAGGCCTTCACTGCCCCTCCAGTTTTTATAGACCTGAGGTTCCAGTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS TCA 72 bp GGACAGGGAAGGGCCGGCCAGGCCTGGTGGTGGTGGTaGGGTCCGGCGGCCAGAGGGCAGGCCGGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: GQGRAGQAWWWW*GPAARGQAGEA
Trigger: AGCTTCTCCGGCCTGCCCTCTGGCCGCCGGACCTCACCACCACCACCAGGCCTGGCCGGCCCTTCCCTGTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS TCA 72 bp GTGAGGTCCGGCGGCCAGAGGGCAGGCCGGAGAAGCTaGTGCTCTGGCGAAGCACAGGAGGGTGGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: VRSGGQRAGRRS*CSGEAQEGGPG
Trigger: CCCCGGGCCACCCTCCTGTGCTTCGCCAGAGCATCAGCTTCTCCGGCCTGCCCTCTGGCCGCCGGACCTCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS CCA 72 bp CCCAGGCTGGAGGGCGCGGCGCTAGGGAGCCCCAGTTaGAGAAGGGAGGCAAGCGTCCCGGGCTGGAGTTTG +
Preference number: 6 (lower is better)
Translates to: PRLEGAALGSPS*RREASVPGWSL
Trigger: CAAACTCCAGCCCGGGACGCTTGCCTCCCTTCTCCAACTGGGGCTCCCTAGCGCCGCGCCCTCCAGCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS CCA 72 bp CCGGAGAAGCTGATGCTCTGGCGAAGCACAGGAGGGTaGCCCGGGGCCGCCAGGTCTTCGCTAGGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: PEKLMLWRSTGG*PGAARSSLGLW
Trigger: CCACAACCCTAGCGAAGACCTGGCGGCCCCGGGCCACCCTCCTGTGCTTCGCCAGAGCATCAGCTTCTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS CCA 72 bp CCAGCCTGGGCTGGACTCAGTCCCTCCATGGTCGGATaGCACGGGCACGTCAGGGCTCAGCGACAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: PAWAGLSPSMVG*HGHVRAQRQEV
Trigger: GACCTCCTGTCGCTGAGCCCTGACGTGCCCGTGCCATCCGACCATGGAGGGACTGAGTCCAGCCCAGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652583.1
CDS GCA 72 bp GTTGGAGAAGGGAGGCAAGCGTCCCGGGCTGGAGTTTaGGGCGCTAGAGAGGTGGGGACTCGGACTCAGGCA +
Preference number: 6 (lower is better)
Translates to: VGEGRQASRAGV*GAREVGTRTQA
Trigger: TGCCTGAGTCCGAGTCCCCACCTCTCTAGCGCCGCAAACTCCAGCCCGGGACGCTTGCCTCCCTTCTCCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS CCA 72 bp AAGCGTCCCGGGCTGGAGTTTGCGGCGCTAGAGAGGTaGGGACTCGGACTCAGGCATGCAGGTACCGGGGAT +
Preference number: 6 (lower is better)
Translates to: KRPGLEFAALER*GLGLRHAGTGD
Trigger: ATCCCCGGTACCTGCATGCCTGAGTCCGAGTCCCCACCTCTCTAGCGCCGCAAACTCCAGCCCGGGACGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS GCA 72 bp GACTCGGACTCAGGCATGCAGGTACCGGGGATGCCGTaGGGCGGGGACTCACCTCGTAGATGGCAGTCAGAT +
Preference number: 6 (lower is better)
Translates to: DSDSGMQVPGMP*GGDSPRRWQSD
Trigger: ATCTGACTGCCATCTACGAGGTGAGTCCCCGCCGCACGGCATCCCCGGTACCTGCATGCCTGAGTCCGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594045.2
CDS TCA 72 bp AGATGGCAGTCAGATCCATGGTGTAACGGTTGGCCATaGGGGGTGTCGGCCGAGAGTGGGAGCGCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: RWQSDPWCNGWP*GVSAESGSAEV
Trigger: GACTTCAGCGCTCCCACTCTCGGCCGACACCCCTCATGGCCAACCGTTACACCATGGATCTGACTGCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594442.2
ENST00000597629.3
CDS TCA 72 bp TGCAGAGACCACAGTGCAAGAGACGTGGCTCCCCGCTaGGATCCAGCTGATCTGACCGGGCAGTCACTTTGT +
Preference number: 6 (lower is better)
Translates to: CRDHSARDVAPR*DPADLTGQSLC
Trigger: ACAAAGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTGTGGTCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS TCA 72 bp CAGTGCAAGAGACGTGGCTCCCCGCTGAGATCCAGCTaGTCTGACCGGGCAGTCACTTTGTCACTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: QCKRRGSPLRSS*SDRAVTLSLRN
Trigger: GTTTCTGAGTGACAAAGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTCTCTTGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1
CDS TCA 72 bp CAAGAGACGTGGCTCCCCGCTGAGATCCAGCTGATCTaGCCGGGCAGTCACTTTGTCACTCAGAAACAGAGA +
Preference number: 6 (lower is better)
Translates to: QETWLPAEIQLI*PGSHFVTQKQR
Trigger: TCTCTGTTTCTGAGTGACAAAGTGACTGCCCGGTCAGATCAGCTGGATCTCAGCGGGGAGCCACGTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594442.2
ENST00000597629.3
ENST00000652583.1