RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFC3H1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133858

Ensembl transcript IDs: ENST00000378743.9, ENST00000546606.1, ENST00000546771.1, ENST00000548100.1, ENST00000549407.1, ENST00000550712.1, ENST00000551487.1, ENST00000552037.1, ENST00000552994.5

Found 462 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTAAAATAAATGTCAGTCACTTTGAGGAACTATACTTACGTATATaGTGTTATGAGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGG +
Preference number: 1 (lower is better)
Translates to: IKINVSHFEELYLRI*CYENLAGPRSRPNR
Trigger: CCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCTCATAACATCATATACGTAAGTATAGTTCCTCAAAGTGACTGACATTTATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGATGTTATGAGAATCTaGCAGGGCCTAGAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPDVMRI*QGLEAG
Trigger: GCCTGCTTCTAGGCCCTGCCAGATTCTCATAACATC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR TCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCATTGCTTCCGGTTTTaGGGACAGGATATTGTAGGG +
Preference number: 2 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPHCFRF*GQDIVG
Trigger: CCCTACAATATCCTGTCCTCAAAACCGGAAGCAATG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCACCACTCTTAGGTTCTaGTGCACTGGCATTTGCAAT +
Preference number: 2 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRITTLRF*CTGICN
Trigger: ATTGCAAATGCCAGTGCATCAGAACCTAAGAGTGGT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR TCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACCACTGGCAGAATACTaGCTGTGGGAATCTGAGTAC +
Preference number: 2 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIPLAEY*LWESEY
Trigger: GTACTCAGATTCCCACAGTCAGTATTCTGCCAGTGG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
3UTR-3UTR TCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAAGAGCTCATTTAGGCTaGCTCCAATCTCTTGGCACT +
Preference number: 2 (lower is better)
Translates to: QPWILNPKQESLRHQRVSRAHLG*LQSLGT
Trigger: AGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCT...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
3UTR-3UTR GCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATCAATAACGCTTGTCTaGCTTACACAGACCTTAGCC +
Preference number: 2 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTSITLV*LTQTLA
Trigger: GGCTAAGGTCTGTGTAAGGCAGACAAGCGTTATTGA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR TCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATCAGAGAGTGTCAAGTaGGTCAGGAATAACACAAAA +
Preference number: 2 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTSESVK*VRNNTK
Trigger: TTTTGTGTTATTCCTGACTCACTTGACACTCTCTGA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR GCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATATCAATAACGCTTGTCTaGCTTACACAGACCTTAGCC +
Preference number: 2 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAISITLV*LTQTLA
Trigger: GGCTAAGGTCTGTGTAAGGCAGACAAGCGTTATTGA...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR TCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGTAGGGAACTTGATATaGTCAATAACGCTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: VKQSRQGVQNVERVINNPVGNLI*SITLVC
Trigger: GCAGACAAGCGTTATTGATCATATCAAGTTCCCTAC...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR TCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGATCAGAGAGTGTCAAGTaGGTCAGGAATAACACAAAA +
Preference number: 2 (lower is better)
Translates to: QSRQGVQNVERVINNPDRSESVK*VRNNTK
Trigger: TTTTGTGTTATTCCTGACTCACTTGACACTCTCTGA...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR TCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCTCAGACTACAACAGGTaGCACACCACCATTTCAAGA +
Preference number: 2 (lower is better)
Translates to: KSSFRLTPISWHLETSFLSDYNR*HTTISR
Trigger: TCTTGAAATGGTGGTGTGTCACCTGTTGTAGTCTGA...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
3UTR-3UTR CCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCCAACTAGCAGACTTGTaGCCATGGCAGTTACACTTT +
Preference number: 2 (lower is better)
Translates to: KSSFRLTPISWHLETSFLQLADL*PWQLHF
Trigger: AAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTG...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
3UTR-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGTAGGGAACTTGATATaGTCAATAACGCTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLVGNLI*SITLVC
Trigger: GCAGACAAGCGTTATTGATCATATCAAGTTCCCTAC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR GCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGGGACTTAGAACTGACTaGACCCAGTGTTCAGTGATT +
Preference number: 2 (lower is better)
Translates to: VLRTGYCRELDMINNACLGLRTD*TQCSVI
Trigger: AATCACTGAACACTGGGTGCAGTCAGTTCTAAGTCC...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
3UTR-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGTGCAACTAGCAGACTaGTGGCCATGGCAGTTACAC +
Preference number: 3 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPVQLAD*WPWQLH
Trigger: GTGTAACTGCCATGGCCACAAGTCTGCTAGTTGCAC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR CAA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTAGAGGATCATGTTCATaGCTTCCGGTTTTGAGGACA +
Preference number: 3 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTARGSCS*LPVLRT
Trigger: TGTCCTCAAAACCGGAAGCAATGAACATGATCCTCT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGGTGCAACTAGCAGACTaGTGGCCATGGCAGTTACAC +
Preference number: 3 (lower is better)
Translates to: VLRTGYCRELDMINNACLVQLAD*WPWQLH
Trigger: GTGTAACTGCCATGGCCACAAGTCTGCTAGTTGCAC...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACAGAGGATCATGTTCATaGCTTCCGGTTTTGAGGACA +
Preference number: 3 (lower is better)
Translates to: QVKQSRQGVQNVERVINNRGSCS*LPVLRT
Trigger: TGTCCTCAAAACCGGAAGCAATGAACATGATCCTCT...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR CAA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAATGTCTGTAGCAGATTaGTTTGATAACAGTACTGTC +
Preference number: 3 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTMSVAD*FDNSTV
Trigger: GACAGTACTGTTATCAAACAAATCTGCTACAGACAT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
3UTR TCA 72 bp AGTGATGCACAAAGAGGTAACTTCTGTAAGGCTCTCTaGTATAAACGGTGGACCTCTCTTTGTCCCTTTAGA +
Preference number: 3 (lower is better)
Translates to: SDAQRGNFCKAL*YKRWTSLCPFR
Trigger: TCTAAAGGGACAAAGAGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAAGTTACCTCTTTGTGCATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
3UTR TCA 72 bp AATGTCAGTCACTTTGAGGAACTATACTTACGTATATaGTGTTATGAGAATCTGGCAGGGCCTAGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: NVSHFEELYLRI*CYENLAGPRSR
Trigger: CCTGCTTCTAGGCCCTGCCAGATTCTCATAACATCATATACGTAAGTATAGTTCCTCAAAGTGACTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
3UTR-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCCAATCTCTTGGCACTaGGAAACTAGTTTTCTCAGG +
Preference number: 3 (lower is better)
Translates to: VLRTGYCRELDMINNACLPISWH*ETSFLR
Trigger: CCTGAGAAAACTAGTTTCCAAGTGCCAAGAGATTGG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAGCCCGCCGCCGCTGCTaGTGCTGCTGCTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRARRRC*CCCSDS
Trigger: GGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTCGCCGCCGCTGCTGCTaGTGCTGCTCCGACTCCGTA +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTARRRCC*CCSDSV
Trigger: TACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCG...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATCGGCGAGAGGCCACTaGAGGCCGGGGCCGGAGTAT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTSARGH*RPGPEY
Trigger: ATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCCGCGTGCCGCGAGCGTaGGAAATTCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIRVPRA*EIPQLL
Trigger: CAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCG...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCGCCCGCCGCCGCTGCTaGTGCTGCTGCTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLARRRC*CCCSDS
Trigger: GGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR TCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTAGCTGCTGGGTCCCCTaGGGTGGCCCCGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFISCWVP*GGPAQT
Trigger: CGTCTGAGCGGGGCCACCTCAGGGGACCCAGCAGCT...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCGGGGCCGGAGTATCTaGGGTCGCCATCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNRGRSI*GRHPGS
Trigger: GCTCCCCGGATGGCGACCGCAGATACTCCGGCCCCG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCGCCCGCCGCCGCTGCTaGTGCTGCTGCTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTARRRC*CCCSDS
Trigger: GGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGC...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACACCCCGCTCAGACGCGTaGCGCGAGCGTGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTPRSDA*REREKF
Trigger: GAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGG...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCACCCCGGTAAGGCCTaGCTCGAAAGCGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPHPGKA*LESGNG
Trigger: ACCGTTTCCGCTTTCGAGGCAGGCCTTACCGGGGTG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTCTGGGTCCCCTGAGGTaGCCCCGCTCAGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLLGPLR*PRSDAC
Trigger: GCACGCGTCTGAGCGGGGCCACCTCAGGGGACCCAG...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAACACCAAGCGGCCTCTaGTCCCCAACTTCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSTPSGL*SPTSPH
Trigger: GTGCGGGGAAGTTGGGGAGCAGAGGCCGCTTGGTGT...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCGCCGCCGCTGCTGCTaGTGCTGCTCCGACTCCGTA +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNRRRCC*CCSDSV
Trigger: TACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCTCCCAGAGGAGGTCTaGACCCCGGCTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPLPEEV*TPACLL
Trigger: GAGGAGGCAAGCCGGGGTGCAGACCTCCTCTGGGAG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCACTGAGAAGAGGACGATaGCGAGGAAGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSLRRGR*RGRATA
Trigger: GGCGGTGGCTCTTCCTCGTCATCGTCCTCTTCTCAG...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCTTCCTCAGCTGCTGCTaGGAAGAGGACGATGACGAG +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIFLSCC*EEDDDE
Trigger: CTCGTCATCGTCCTCTTCTCAGCAGCAGCTGAGGAA...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGAGCTGCTGGGTCCCCTaGGGTGGCCCCGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLSCWVP*GGPAQT
Trigger: CGTCTGAGCGGGGCCACCTCAGGGGACCCAGCAGCT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGACTGCTTTCGGACAGTaGGCTCGAAGGCATCCGTAC +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPTAFGQ*ARRHPY
Trigger: GTACGGATGCCTTCGAGCTCACTGTCCGAAAGCAGT...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACGCTGCTGCTGCTGCTaGTCCGACTCCGTATCTGGC +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIRCCCC*SDSVSG
Trigger: GCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCGCTGCTGCTGCTGCTaGTCCGACTCCGTATCTGGC +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPRCCCC*SDSVSG
Trigger: GCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCACACCCCGGTAAGGCCTaGCTCGAAAGCGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSHPGKA*LESGNG
Trigger: ACCGTTTCCGCTTTCGAGGCAGGCCTTACCGGGGTG...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTGTCTGCACCCCGGCTTaGCTCCTCGCTCACCCACTC +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLVCTPA*LLAHPL
Trigger: GAGTGGGTGAGCGAGGAGGCAAGCCGGGGTGCAGAC...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCTGGGTCCCCTGAGGTaGCCCCGCTCAGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLLGPLR*PRSDAC
Trigger: GCACGCGTCTGAGCGGGGCCACCTCAGGGGACCCAG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAACCGGAACGGTTCTTTaGGTCGGTAGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTTGTVL*VGSCWV
Trigger: GACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTCGCGTGCCGCGAGCGTaGGAAATTCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLRVPRA*EIPQLL
Trigger: CAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCG...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCAGCTGCTGGGTCCCCTaGGGTGGCCCCGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVSCWVP*GGPAQT
Trigger: CGTCTGAGCGGGGCCACCTCAGGGGACCCAGCAGCT...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCATGGCGGTTGCACTGGTaGAGGAGCTGGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSWRLHW*RSWRTG
Trigger: ACCAGTTCTCCAGCTCCTTCACCAGTGCAACCGCCA...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGACACCAAGCGGCCTCTaGTCCCCAACTTCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLTPSGL*SPTSPH
Trigger: GTGCGGGGAAGTTGGGGAGCAGAGGCCGCTTGGTGT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGATCCGCCCGACAATTaGCTCGTTTCCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPDPPDN*LVSLLS
Trigger: GGAAAGAAGGGAAACGAGGCAATTGTCGGGCGGATC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCCCCCGCTCAGACGCGTaGCGCGAGCGTGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLPRSDA*REREKF
Trigger: GAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGG...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTGTCTGCACCCCGGCTTaGCTCCTCGCTCACCCACTC +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAVCTPA*LLAHPL
Trigger: GAGTGGGTGAGCGAGGAGGCAAGCCGGGGTGCAGAC...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTGAACCCGGATCCTaGTCCTCCTCCCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIAEPGS*SSSQRR
Trigger: CCTCCTCTGGGAGGAGGAGCAGGATCCGGGTTCAGC...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTCTTTCCTAACGGACTaGGTCGGTGCGGTCTTACCC +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTASFLTD*VGAVLP
Trigger: GGGTAAGACCGCACCGACCCAGTCCGTTAGGAAAGA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCCTGGGTCCCCTGAGGTaGCCCCGCTCAGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVLGPLR*PRSDAC
Trigger: GCACGCGTCTGAGCGGGGCCACCTCAGGGGACCCAG...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAACCGGAACGGTTCTTTaGGTCGGTAGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRTGTVL*VGSCWV
Trigger: GACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGT...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTCGGTCCAAGGCGAGGTaGCTCCGCTCCCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLRSKAR*LRSQKD
Trigger: GTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCG...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCGGAGCTCTTCCGAGGTaGAGAGGGCTCTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLGALPR*RGLSPA
Trigger: AGCTGGCGAGAGCCCTCTCCACCTCGGAAGAGCTCC...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCAGGCTGGCTCAAAGGTaGCAGAGAAGAAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIRLAQR*QRRNLR
Trigger: CCTCAGGTTTCTTCTCTGCCACCTTTGAGCCAGCCT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCCGCGTGCCGCGAGCGTaGGAAATTCCTCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTRVPRA*EIPQLL
Trigger: CAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCG...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTTGGCGGTTGCACTGGTaGAGGAGCTGGAGAACTGGT +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPWRLHW*RSWRTG
Trigger: ACCAGTTCTCCAGCTCCTTCACCAGTGCAACCGCCA...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTGGCAGAGAAGAAACCTaGGGTGGTGGAGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAGREET*GGGGKE
Trigger: TTCTTTGCCTCCACCACCTCAGGTTTCTTCTCTGCC...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCACACCAAGCGGCCTCTaGTCCCCAACTTCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTTPSGL*SPTSPH
Trigger: GTGCGGGGAAGTTGGGGAGCAGAGGCCGCTTGGTGT...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAAACGGACTGGGTCGGTaGGGTCTTACCCTACTCGGA +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAINGLGR*GLTLLG
Trigger: TCCGAGTAGGGTAAGACCGCACCGACCCAGTCCGTT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTCGGGGCCGGAGTATCTaGGGTCGCCATCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIRGRSI*GRHPGS
Trigger: GCTCCCCGGATGGCGACCGCAGATACTCCGGCCCCG...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCCGCTGCTGCTGCTGCTaGTCCGACTCCGTATCTGGC +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTRCCCC*SDSVSG
Trigger: GCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCG...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGAAGACGGCCGGGGACTaGTTTCGGACAGTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLKTAGD*FRTVSS
Trigger: CGAGCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCTCCCAGAGGAGGTCTaGACCCCGGCTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLLPEEV*TPACLL
Trigger: GAGGAGGCAAGCCGGGGTGCAGACCTCCTCTGGGAG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGAGAAAAATGGCGGTTaGACTGGTGAAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPEKNGG*TGEGAG
Trigger: TCCAGCTCCTTCACCAGTGCAACCGCCATTTTTCTC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCTCGGCGAGAGGCCACTaGAGGCCGGGGCCGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVSARGH*RPGPEY
Trigger: ATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGA...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCCGGTCCAAGGCGAGGTaGCTCCGCTCCCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTRSKAR*LRSQKD
Trigger: GTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCG...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCGGAGCTCTTCCGAGGTaGAGAGGGCTCTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTGALPR*RGLSPA
Trigger: AGCTGGCGAGAGCCCTCTCCACCTCGGAAGAGCTCC...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGACGAGATCACAGTTCGTaGAAGACGGGGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRRDHSS*KTGSSV
Trigger: CACAGAGGACCCCGTCTTCCACGAACTGTGATCTCG...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCCTGAGAAGAGGACGATaGCGAGGAAGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTLRRGR*RGRATA
Trigger: GGCGGTGGCTCTTCCTCGTCATCGTCCTCTTCTCAG...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCGTACAGAAGGCGGATaGGACCGGAACGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPRTEGG*DRNGSL
Trigger: CAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAACTGCTTTCGGACAGTaGGCTCGAAGGCATCCGTAC +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAITAFGQ*ARRHPY
Trigger: GTACGGATGCCTTCGAGCTCACTGTCCGAAAGCAGT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCAGACGGGGTCCTCTGTaGAACTTTGGATTCTGTATC +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIRRGPL*NFGFCI
Trigger: GATACAGAATCCAAAGTTTCACAGAGGACCCCGTCT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCAGAGCTCATTTAGGCTaGCTCCAATCTCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIRAHLG*LQSLGT
Trigger: AGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTTCCTAGCGCCCCCTTaGTCCTCAGCGATCGGGGTT +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAFLAPP*SSAIGV
Trigger: AACCCCGATCGCTGAGGAGCAAGGGGGCGCTAGGAA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378743.9
CDS-3UTR GCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTCGCCGCCGCTGCTGCTaGTGCTGCTCCGACTCCGTA +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIRRRCC*CCSDSV
Trigger: TACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCG...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCGTCTGCACCCCGGCTTaGCTCCTCGCTCACCCACTC +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVVCTPA*LLAHPL
Trigger: GAGTGGGTGAGCGAGGAGGCAAGCCGGGGTGCAGAC...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCCTCCCAGAGGAGGTCTaGACCCCGGCTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVLPEEV*TPACLL
Trigger: GAGGAGGCAAGCCGGGGTGCAGACCTCCTCTGGGAG...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACACTGGCCACTGCCTTTaGCCGAGCAAGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNTGHCL*PSKLFS
Trigger: GGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCCAGT...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCATTCTTTACTGGCCACTaGCTTTGCCCGAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSFFTGH*LCPSKL
Trigger: GAGCTTGCTCGGGCAAAGGCAGTGGCCAGTAAAGAA...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTGCAGTAAGCCACACTaGTCTGGCTTTGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTACSKPH*SGFVML
Trigger: CAGCATGACAAAGCCAGAGCAGTGTGGCTTACTGCA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCCTCCGACTCCGTATCTaGCTGTTATTATCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRILRLRI*LLLSSS
Trigger: TGACGACGATAATAACAGCCAGATACGGAGTCGGAG...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCGGTCCAAGGCGAGGTaGCTCCGCTCCCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLRSKAR*LRSQKD
Trigger: GTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGGGAGCTCTTCCGAGGTaGAGAGGGCTCTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLGALPR*RGLSPA
Trigger: AGCTGGCGAGAGCCCTCTCCACCTCGGAAGAGCTCC...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCTCATCTGCAAAAGGTaGTTTTGGAGGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPLICKR*FWRLFW
Trigger: CCAGAACAGCCTCCAAAACCACCTTTTGCAGATGAG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCGAGATCACAGTTCGTaGAAGACGGGGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPRDHSS*KTGSSV
Trigger: CACAGAGGACCCCGTCTTCCACGAACTGTGATCTCG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCTTCCTATTTCTTTACTaGCCACTGCCTTTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIFLFLY*PLPLPE
Trigger: CTCGGGCAAAGGCAGTGGCCAGTAAAGAAATAGGAA...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGTGGCTATTTTCCAGGTaGCCAGGCATGTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPWLFSR*PGMLGY
Trigger: ATATCCCAACATGCCTGGCCACCTGGAAAATAGCCA...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378743.9
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCTGAGAAGAGGACGATaGCGAGGAAGAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLLRRGR*RGRATA
Trigger: GGCGGTGGCTCTTCCTCGTCATCGTCCTCTTCTCAG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCGTACAGAAGGCGGATaGGACCGGAACGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLRTEGG*DRNGSL
Trigger: CAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACG...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTTTTTACTGGCTGACTaGAGAGCCAAAAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAFLLAD*RAKRRS
Trigger: GCTTCGCCTTTTGGCTCTTCAGTCAGCCAGTAAAAA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGGCAGAGAAGAAACCTaGGGTGGTGGAGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPGREET*GGGGKE
Trigger: TTCTTTGCCTCCACCACCTCAGGTTTCTTCTCTGCC...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATCTTGGCACAGGATGTaGATTGTTCAGAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTSWHRM*IVQNWR
Trigger: CCTCCAGTTCTGAACAATTCACATCCTGTGCCAAGA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCACTTGTACGCAAGCTTaGGCCAAAGTTGTACATGAG +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRITCTQA*AKVVHE
Trigger: CTCATGTACAACTTTGGCTCAAGCTTGCGTACAAGT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAAGAGCTCATTTAGGCTaGCTCCAATCTCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTRAHLG*LQSLGT
Trigger: AGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGACCACTCTTAGGTTCTaGTGCACTGGCATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPTTLRF*CTGICN
Trigger: ATTGCAAATGCCAGTGCATCAGAACCTAAGAGTGGT...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCACCACTGGCAGAATACTaGCTGTGGGAATCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSPLAEY*LWESEY
Trigger: GTACTCAGATTCCCACAGTCAGTATTCTGCCAGTGG...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCGCTGAACCCGGATCCTaGTCCTCCTCCCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVAEPGS*SSSQRR
Trigger: CCTCCTCTGGGAGGAGGAGCAGGATCCGGGTTCAGC...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCCCACTATCAGTAGGTTaGTTATCTAAGGATCGCCTC +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIPLSVG*LSKDRL
Trigger: GAGGCGATCCTTAGATAAGCAACCTACTGATAGTGG...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGTATGTAGGCCAACCATaGCAAACATCGATCACTGGT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPYVGQP*QTSITG
Trigger: ACCAGTGATCGATGTTTGGCATGGTTGGCCTACATA...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCAAGGCTCTCATCTGTaGAAGCTTTCACTGCATCTT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPQGSHL*KLSLHL
Trigger: AAGATGCAGTGAAAGCTTGCACAGATGAGAGCCTTG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCTTTACAAAGCTCCATTaGAGCCTCATACCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIFTKLH*SLIPLQ
Trigger: CTGGAGAGGTATGAGGCTGCAATGGAGCTTTGTAAA...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCGGACTTAGAACTGACTaGACCCAGTGTTCAGTGATT +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIGLRTD*TQCSVI
Trigger: AATCACTGAACACTGGGTGCAGTCAGTTCTAAGTCC...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCACCGGAACGGTTCTTTaGGTCGGTAGCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTTGTVL*VGSCWV
Trigger: GACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGT...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCACTGCTTTCGGACAGTaGGCTCGAAGGCATCCGTAC +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTTAFGQ*ARRHPY
Trigger: GTACGGATGCCTTCGAGCTCACTGTCCGAAAGCAGT...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAAGGTACTTTCGGTTTTaGAGCTTGCTCAGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRRYFRF*SLLSSS
Trigger: CGAACTGCTGAGCAAGCTTCAAAACCGAAAGTACCT...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATGCTTTCTTGGACTTaGTACTGGAGAACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAMLSWT*YWRTVQ
Trigger: CTGGACAGTTCTCCAGTATCAAGTCCAAGAAAGCAT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAATGCTTTCTTGGACTTaGTACTGGAGAACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTMLSWT*YWRTVQ
Trigger: CTGGACAGTTCTCCAGTATCAAGTCCAAGAAAGCAT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTCACTCCCCCTCATTTTaGTTCAAGTACTTGTACGCA +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAHSPSF*FKYLYA
Trigger: TGCGTACAAGTACTTGAATCAAAATGAGGGGGAGTG...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAAGAATCCAAGGATTCTaGGCACTCCCCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRRIQGF*ALPLIL
Trigger: CAAAATGAGGGGGAGTGCTCAGAATCCTTGGATTCT...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGATCCGCCCGACAATTaGCTCGTTTCCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLDPPDN*LVSLLS
Trigger: GGAAAGAAGGGAAACGAGGCAATTGTCGGGCGGATC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTCCCCGCTCAGACGCGTaGCGCGAGCGTGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIPRSDA*REREKF
Trigger: GAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGG...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGGAGAAAAATGGCGGTTaGACTGGTGAAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWEKNGG*TGEGAG
Trigger: TCCAGCTCCTTCACCAGTGCAACCGCCATTTTTCTC...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGACTGGCCACTGCCTTTaGCCGAGCAAGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLTGHCL*PSKLFS
Trigger: GGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCCAGT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTTCTTTACTGGCCACTaGCTTTGCCCGAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLFFTGH*LCPSKL
Trigger: GAGCTTGCTCGGGCAAAGGCAGTGGCCAGTAAAGAA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATATTGGATGTTTCCTaGTTGGCTGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAILDVS*LAAPIR
Trigger: TCTGATGGGAGCAGCCAAGCAGGAAACATCCAATAT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATCCAAGGTTTTGGAATaGTGGGTCTTTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTSKVLE*WVFGTQ
Trigger: CTGTGTTCCAAAGACCCAGCATTCCAAAACCTTGGA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTCAATAACGCTTGTCTaGCTTACACAGACCTTAGCC +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTASITLV*LTQTLA
Trigger: GGCTAAGGTCTGTGTAAGGCAGACAAGCGTTATTGA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTCTTTCCTAACGGACTaGGTCGGTGCGGTCTTACCC +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNASFLTD*VGAVLP
Trigger: GGGTAAGACCGCACCGACCCAGTCCGTTAGGAAAGA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTAGGCTGGCTCAAAGGTaGCAGAGAAGAAACCTGAGG +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIRLAQR*QRRNLR
Trigger: CCTCAGGTTTCTTCTCTGCCACCTTTGAGCCAGCCT...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGTCCTCTGTGAAACTTTaGATTCTGTATCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPSSVKL*ILYPRL
Trigger: CAGCCTAGGATACAGAATCCAAAGTTTCACAGAGGA...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCGCTGTTTCTCACGGTTaGCAATCTCTTCCTTTAACA +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIAVSHG*QSLPLT
Trigger: TGTTAAAGGAAGAGATTGCCAACCGTGAGAAACAGC...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTAGGAGAACAGCCATCTaGTCCATTGACATTCGATCT +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTARRTAI*SIDIRS
Trigger: AGATCGAATGTCAATGGACCAGATGGCTGTTCTCCT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCATGTTTGTGTAAAGTaGAAGGCAGGCCTCTATTCT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPHVCVK*KAGLYS
Trigger: AGAATAGAGGCCTGCCTTCCACTTTACACAAACATG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAGATGTTATGAGAATCTaGCAGGGCCTAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIDVMRI*QGLEAG
Trigger: GCCTGCTTCTAGGCCCTGCCAGATTCTCATAACATC...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTTTTTTACTGGCTGACTaGAGAGCCAAAAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPFLLAD*RAKRRS
Trigger: GCTTCGCCTTTTGGCTCTTCAGTCAGCCAGTAAAAA...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGAGGTACTTTCGGTTTTaGAGCTTGCTCAGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWRYFRF*SLLSSS
Trigger: CGAACTGCTGAGCAAGCTTCAAAACCGAAAGTACCT...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCAAACGGCAGAAACACTaGTCCGGTTCAATCATATTA +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIKRQKH*SGSIIL
Trigger: TAATATGATTGAACCGGATCAGTGTTTCTGCCGTTT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAATTAGCTGGCATAACTaGACAAAACCGTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTISWHN*TKPFQG
Trigger: ACCTTGGAACGGTTTTGTTCAGTTATGCCAGCTAAT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTAAGACGGCCGGGGACTaGTTTCGGACAGTGAGCTCG +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIKTAGD*FRTVSS
Trigger: CGAGCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTT...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTCACCCCGGTAAGGCCTaGCTCGAAAGCGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIHPGKA*LESGNG
Trigger: ACCGTTTCCGCTTTCGAGGCAGGCCTTACCGGGGTG...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCTCCTCTTCCTCATCTaGAAAAGGTGGTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPLLFLI*KRWFWR
Trigger: CCTCCAAAACCACCTTTTGCAGATGAGGAAGAGGAG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGACAACCACTGATTTATaGTTTGGAAGCGAGATCACA +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPTTTDL*FGSEIT
Trigger: TGTGATCTCGCTTCCAAAGCATAAATCAGTGGTTGT...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATTTTGTTGTTCCTTTaGTTTAAGGGCACGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAILLFL*FKGTGF
Trigger: GAAGCCCGTGCCCTTAAAGCAAAGGAACAACAAAAT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACTGCAGTAAGCCACACTaGTCTGGCTTTGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNCSKPH*SGFVML
Trigger: CAGCATGACAAAGCCAGAGCAGTGTGGCTTACTGCA...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAACCTTCCAAAACTTTTaGAGCTCTTCCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAITFQNF*SSSEVE
Trigger: CTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGCTCATCTGCAAAAGGTaGTTTTGGAGGCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWLICKR*FWRLFW
Trigger: CCAGAACAGCCTCCAAAACCACCTTTTGCAGATGAG...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTCCTCTGTGAAACTTTaGATTCTGTATCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTASSVKL*ILYPRL
Trigger: CAGCCTAGGATACAGAATCCAAAGTTTCACAGAGGA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCACTATTTGTTGACTTaGAAGCCTCTCCATCAGATT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPHYLLT*KPLHQI
Trigger: AATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGATTGCCAGTGCACTTTaGCATCTTCCAGTAAATATG +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPIASAL*HLPVNM
Trigger: CATATTTACTGGAAGATGCCAAAGTGCACTGGCAAT...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGGTGGCCAGGCATGTTaGGATATTATATGTAAACAT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPGGQAC*DIICKH
Trigger: ATGTTTACATATAATATCCCAACATGCCTGGCCACC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACAATCTCAGCAGCAATaGCTATTTTCCAGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIQSQQQ*LFSRWP
Trigger: TGGCCACCTGGAAAATAGCCATTGCTGCTGAGATTG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378743.9
CDS-3UTR TCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCTTGTACTGTTCTTCCTaGTTTGAGAGATCTCGAATT +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRILYCSS*FERSRI
Trigger: AATTCGAGATCTCTCAAATCAGGAAGAACAGTACAA...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCACCAACCAATTTCATaGATCGATTGTACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPHQPIS*IDCTVL
Trigger: AAGAACAGTACAATCGATTCATGAAATTGGTTGGTG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTGTTCAGAACTGGAGGTaGAGGTGGGTCACTATTACT +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLVQNWR*RWVTIT
Trigger: AGTAATAGTGACCCACCTTCACCTCCAGTTCTGAAC...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGTTCAGAACTGGAGGTaGAGGTGGGTCACTATTACT +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIVQNWR*RWVTIT
Trigger: AGTAATAGTGACCCACCTTCACCTCCAGTTCTGAAC...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTTCTTGGCACAGGATGTaGATTGTTCAGAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFISWHRM*IVQNWR
Trigger: CCTCCAGTTCTGAACAATTCACATCCTGTGCCAAGA...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACAGACGGGGTCCTCTGTaGAACTTTGGATTCTGTATC +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNRRGPL*NFGFCI
Trigger: GATACAGAATCCAAAGTTTCACAGAGGACCCCGTCT...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAAAAAACACTATTTGTTaGCTTGGAAGCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTKNTIC*LGSLSI
Trigger: GATGGAGAGGCTTCCAAGTCAACAAATAGTGTTTTT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTAAACGGCAGAAACACTaGTCCGGTTCAATCATATTA +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAKRQKH*SGSIIL
Trigger: TAATATGATTGAACCGGATCAGTGTTTCTGCCGTTT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTAGAATCCAAGGATTCTaGGCACTCCCCCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLRIQGF*ALPLIL
Trigger: CAAAATGAGGGGGAGTGCTCAGAATCCTTGGATTCT...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAGCTTCAAACAAGAGTTaGTCTTTCCACAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRASNKS*SFHSDA
Trigger: TGCATCACTGTGGAAAGATCAACTCTTGTTTGAAGC...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAGTAGGGAACTTGATATaGTCAATAACGCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSVGNLI*SITLVC
Trigger: GCAGACAAGCGTTATTGATCATATCAAGTTCCCTAC...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCATTGCTTCCGGTTTTaGGGACAGGATATTGTAGGG +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNHCFRF*GQDIVG
Trigger: CCCTACAATATCCTGTCCTCAAAACCGGAAGCAATG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCGTTTCACACATTTCCTaGACCTCGTCCTTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLVSHIS*TSSLVP
Trigger: AGGAACCAAGGACGAGGTGCAGGAAATGTGTGAAAC...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTGTTTCCTGCTTGGCTaGTCCCATCAGAAACTCCAA +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLCFLLG*SHQKLQ
Trigger: TTGGAGTTTCTGATGGGAGCAGCCAAGCAGGAAACA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCTCCGACTCCGTATCTaGCTGTTATTATCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNLRLRI*LLLSSS
Trigger: TGACGACGATAATAACAGCCAGATACGGAGTCGGAG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGACCTTCCAAAACTTTTaGAGCTCTTCCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLTFQNF*SSSEVE
Trigger: CTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAAAGGAGCTGGAGAACTaGTTTCACTATCTGTATCCA +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRKELEN*FHYLYP
Trigger: TGGATACAGATAGTGAAACCAGTTCTCCAGCTCCTT...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGAGAAACCTGAGGTGGTaGAGGCAAAGAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLRNLRW*RQRKRW
Trigger: CCATCTCTTTCTTTGCCTCCACCACCTCAGGTTTCT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCAGAAACCTGAGGTGGTaGAGGCAAAGAAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLRNLRW*RQRKRW
Trigger: CCATCTCTTTCTTTGCCTCCACCACCTCAGGTTTCT...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACACACTATTTGTTGACTTaGAAGCCTCTCCATCAGATT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTHYLLT*KPLHQI
Trigger: AATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTG...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTTCCTATTTCTTTACTaGCCACTGCCTTTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLFLFLY*PLPLPE
Trigger: CTCGGGCAAAGGCAGTGGCCAGTAAAGAAATAGGAA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAAGGAGAACAGCCATCTaGTCCATTGACATTCGATCT +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIRRTAI*SIDIRS
Trigger: AGATCGAATGTCAATGGACCAGATGGCTGTTCTCCT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATTTGGTTCTCTGGCTaGAAAGCATACTTAATTGGT +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIIWFSG*KAYLIG
Trigger: ACCAATTAAGTATGCTTTCCAGCCAGAGAACCAAAT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAGCTGGAACATTTATTTaGTTCTCTGGCTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSAGTFI*FSGWKA
Trigger: TGCTTTCCAGCCAGAGAACCAAATAAATGTTCCAGC...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTCCTGCACCTCGTCCTTaGTTCCTCTTTTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLPAPRP*FLFLRT
Trigger: TGTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGG...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCAAATTTCCGCAAAAATaGAAGAAGATTATCGCCTCG +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIKFPQK*KKIIAS
Trigger: CGAGGCGATAATCTTCTTCCATTTTTGCGGAAATTT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTAAGGTTTTGGAATGCTaGGTCTTTGGAACACAGCTC +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPKVLEC*VFGTQL
Trigger: GAGCTGTGTTCCAAAGACCCAGCATTCCAAAACCTT...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTGATGTTATGAGAATCTaGCAGGGCCTAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNADVMRI*QGLEAG
Trigger: GCCTGCTTCTAGGCCCTGCCAGATTCTCATAACATC...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGCAACTAGCAGACTTGTaGCCATGGCAGTTACACTTT +
Preference number: 4 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWQLADL*PWQLHF
Trigger: AAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTG...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR TCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTTTCCTCAGCTGCTGCTaGGAAGAGGACGATGACGAG +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIFLSCC*EEDDDE
Trigger: CTCGTCATCGTCCTCTTCTCAGCAGCAGCTGAGGAA...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTCGTACAGAAGGCGGATaGGACCGGAACGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIRTEGG*DRNGSL
Trigger: CAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACG...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGTCTTCGCTCTCTGCTTaGACCAGACAAAATTTCATC +
Preference number: 4 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWSSLSA*TRQNFI
Trigger: GATGAAATTTTGTCTGGTTCAAGCAGAGAGCGAAGA...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAAGCCAAAGTTGTACATaGGAAGGATTTTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRSQSCT*EGFSST
Trigger: TGTGCTTGAAAATCCTTCTCATGTACAACTTTGGCT...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGACTTGTACGCAAGCTTaGGCCAAAGTTGTACATGAG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLTCTQA*AKVVHE
Trigger: CTCATGTACAACTTTGGCTCAAGCTTGCGTACAAGT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTCACTCCCCCTCATTTTaGTTCAAGTACTTGTACGCA +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLHSPSF*FKYLYA
Trigger: TGCGTACAAGTACTTGAATCAAAATGAGGGGGAGTG...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCACTTGGTTCCTCTTTTTaGGAACAATCTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSLGSSF*EQSEVM
Trigger: CATTACCTCAGATTGTTCTCAAAAAGAGGAACCAAG...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGTTCTGTAAGGCTCTCTaGTATAAACGGTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLFCKAL*YKRWTS
Trigger: AGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAA...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGCACCCAGTGTTCAGTaGTTCTTGCTTTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLAPSVQ*FLLSVL
Trigger: CAAAACAGAAAGCAAGAATCACTGAACACTGGGTGC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGTCAGACTACAACAGGTaGCACACCACCATTTCAAGA +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLSDYNR*HTTISR
Trigger: TCTTGAAATGGTGGTGTGTCACCTGTTGTAGTCTGA...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCGATCCGCCCGACAATTaGCTCGTTTCCCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVDPPDN*LVSLLS
Trigger: GGAAAGAAGGGAAACGAGGCAATTGTCGGGCGGATC...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR GCA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCGCACATTCTCTTCTTTaGTACTCAATGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIAHSLL*YSMLVF
Trigger: AAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGC...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTCTCCTCTTCCTCATCTaGAAAAGGTGGTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNALLFLI*KRWFWR
Trigger: CCTCCAAAACCACCTTTTGCAGATGAGGAAGAGGAG...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTTCGGTTTTGAAGCTTaGTCAGCAGTTCGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLFGFEA*SAVRLA
Trigger: AGCAAGACGAACTGCTGAGCAAGCTTCAAAACCGAA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCTTCGGTTTTGAAGCTTaGTCAGCAGTTCGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLFGFEA*SAVRLA
Trigger: AGCAAGACGAACTGCTGAGCAAGCTTCAAAACCGAA...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGCATTGTTTTACTTTGTaGTGTGACAAAATCCACATC +
Preference number: 4 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPHCFTL*CDKIHI
Trigger: GATGTGGATTTTGTCACAGCACAAAGTAAAACAATG...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTGTTTCACACATTTCCTaGACCTCGTCCTTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAVSHIS*TSSLVP
Trigger: AGGAACCAAGGACGAGGTGCAGGAAATGTGTGAAAC...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTTTCCTGCTTGGCTaGTCCCATCAGAAACTCCAA +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNACFLLG*SHQKLQ
Trigger: TTGGAGTTTCTGATGGGAGCAGCCAAGCAGGAAACA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGATATTGGATGTTTCCTaGTTGGCTGCTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLILDVS*LAAPIR
Trigger: TCTGATGGGAGCAGCCAAGCAGGAAACATCCAATAT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTATGTAGGCCAACCATaGCAAACATCGATCACTGGT +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLYVGQP*QTSITG
Trigger: ACCAGTGATCGATGTTTGGCATGGTTGGCCTACATA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTCAAGGCTCTCATCTGTaGAAGCTTTCACTGCATCTT +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIQGSHL*KLSLHL
Trigger: AAGATGCAGTGAAAGCTTGCACAGATGAGAGCCTTG...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGTCCAAGGTTTTGGAATaGTGGGTCTTTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLSKVLE*WVFGTQ
Trigger: CTGTGTTCCAAAGACCCAGCATTCCAAAACCTTGGA...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGACTTAGAACTGACTaGACCCAGTGTTCAGTGATT +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIGLRTD*TQCSVI
Trigger: AATCACTGAACACTGGGTGCAGTCAGTTCTAAGTCC...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTTCTTTCCTAACGGACTaGGTCGGTGCGGTCTTACCC +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVISFLTD*VGAVLP
Trigger: GGGTAAGACCGCACCGACCCAGTCCGTTAGGAAAGA...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATTATCAGTGCTAGTTTaGTCCTCGAAGTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTLSVLV*SSKFNV
Trigger: AACATTGAACTTCGAGGACCAAACTAGCACTGATAA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTAGAAGAAACCTGAGGTaGTGGAGGCAAAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLRRNLR*WRQRKR
Trigger: TCTCTTTCTTTGCCTCCACCACCTCAGGTTTCTTCT...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCAGAAGAAACCTGAGGTaGTGGAGGCAAAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLRRNLR*WRQRKR
Trigger: TCTCTTTCTTTGCCTCCACCACCTCAGGTTTCTTCT...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTTGCAAAAGGTGGTTTTaGAGGCTGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFICKRWF*RLFWIF
Trigger: GAAGATCCAGAACAGCCTCCAAAACCACCTTTTGCA...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATTCCTCTTCCACAACTaGAGAGATATTTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTFLFHN*RDILLF
Trigger: GAACAACAAAATATCTCTCCAGTTGTGGAAGAGGAA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTATGACAGAATGTCCTaGAATAACTGTTTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAYDRMS*NNCFRL
Trigger: TAGCCGAAAACAGTTATTCCAGGACATTCTGTCATA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATATGACAGAATGTCCTaGAATAACTGTTTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTYDRMS*NNCFRL
Trigger: TAGCCGAAAACAGTTATTCCAGGACATTCTGTCATA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAGAAAGCATACTTAATTaGTCCTGTAGACTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRESILN*SCRLFL
Trigger: GAGGAACAGTCTACAGGACCAATTAAGTATGCTTTC...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATTTGGTTCTCTGGCTaGAAAGCATACTTAATTGGT +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAIWFSG*KAYLIG
Trigger: ACCAATTAAGTATGCTTTCCAGCCAGAGAACCAAAT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTCCTGCACCTCGTCCTTaGTTCCTCTTTTTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAPAPRP*FLFLRT
Trigger: TGTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGG...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACATGTTTGTGTAAAGTaGAAGGCAGGCCTCTATTCT +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIHVCVK*KAGLYS
Trigger: AGAATAGAGGCCTGCCTTCCACTTTACACAAACATG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCTACCTCTCCAGGAGTTaGTGCAGAGCAATCATGTTT +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLYLSRS*CRAIMF
Trigger: AAACATGATTGCTCTGCACCAACTCCTGGAGAGGTA...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTAAGGTTTTGGAATGCTaGGTCTTTGGAACACAGCTC +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIKVLEC*VFGTQL
Trigger: GAGCTGTGTTCCAAAGACCCAGCATTCCAAAACCTT...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGACCGTTCCAAGGTTTTaGAATGCTGGGTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLTVPRF*NAGSLE
Trigger: TTCCAAAGACCCAGCATTCCAAAACCTTGGAACGGT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCACTGACTCCAATCTCTTaGCACTTGGAAACTAGTTTT +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSLTPIS*HLETSF
Trigger: AAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAG...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTCAACTAGCAGACTTGTaGCCATGGCAGTTACACTTT +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIQLADL*PWQLHF
Trigger: AAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTG...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAAAAAACACTATTTGTTaGCTTGGAAGCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIKNTIC*LGSLSI
Trigger: GATGGAGAGGCTTCCAAGTCAACAAATAGTGTTTTT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCATGTCTTCAGCTGATCTaGTTTAATCAAACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSCLQLI*FNQTLF
Trigger: AAACAGCGTTTGATTAAATCAGATCAGCTGAAGACA...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTCTTCGCTCTCTGCTTaGACCAGACAAAATTTCATC +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLSSLSA*TRQNFI
Trigger: GATGAAATTTTGTCTGGTTCAAGCAGAGAGCGAAGA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGAGCCATCTGGTCCATTaGCATTCGATCTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLSHLVH*HSIFVY
Trigger: GTAAACAAAGATCGAATGTCAATGGACCAGATGGCT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCTTGGTTCCTCTTTTTaGGAACAATCTGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPLGSSF*EQSEVM
Trigger: CATTACCTCAGATTGTTCTCAAAAAGAGGAACCAAG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTGCTTCAAACAAGAGTTaGTCTTTCCACAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLASNKS*SFHSDA
Trigger: TGCATCACTGTGGAAAGATCAACTCTTGTTTGAAGC...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTGCACCCAGTGTTCAGTaGTTCTTGCTTTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAAPSVQ*FLLSVL
Trigger: CAAAACAGAAAGCAAGAATCACTGAACACTGGGTGC...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCATTGCTTCCGGTTTTaGGGACAGGATATTGTAGGG +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLHCFRF*GQDIVG
Trigger: CCCTACAATATCCTGTCCTCAAAACCGGAAGCAATG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGTCAGAGAGTGTCAAGTaGGTCAGGAATAACACAAAA +
Preference number: 4 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWSESVK*VRNNTK
Trigger: TTTTGTGTTATTCCTGACTCACTTGACACTCTCTGA...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR TCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTACCACTCTTAGGTTCTaGTGCACTGGCATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNATTLRF*CTGICN
Trigger: ATTGCAAATGCCAGTGCATCAGAACCTAAGAGTGGT...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTCCACTATCAGTAGGTTaGTTATCTAAGGATCGCCTC +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAPLSVG*LSKDRL
Trigger: GAGGCGATCCTTAGATAAGCAACCTACTGATAGTGG...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTACAACCACTGATTTATaGTTTGGAAGCGAGATCACA +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPTTTDL*FGSEIT
Trigger: TGTGATCTCGCTTCCAAAGCATAAATCAGTGGTTGT...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTCTGCTTAGTAACCATTaGTATCCTGCCAATACCATC +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFILLSNH*YPANTI
Trigger: GATGGTATTGGCAGGATAGCAATGGTTACTAAGCAG...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCCTGCTTAGTAACCATTaGTATCCTGCCAATACCATC +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLLLSNH*YPANTI
Trigger: GATGGTATTGGCAGGATAGCAATGGTTACTAAGCAG...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACACATTGTTTTACTTTGTaGTGTGACAAAATCCACATC +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTHCFTL*CDKIHI
Trigger: GATGTGGATTTTGTCACAGCACAAAGTAAAACAATG...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTTTACAAAGCTCCATTaGAGCCTCATACCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAFTKLH*SLIPLQ
Trigger: CTGGAGAGGTATGAGGCTGCAATGGAGCTTTGTAAA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGAAGGAGCTGGAGAACTaGTTTCACTATCTGTATCCA +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLKELEN*FHYLYP
Trigger: TGGATACAGATAGTGAAACCAGTTCTCCAGCTCCTT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGCAAAAGGTGGTTTTaGAGGCTGTTCTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNACKRWF*RLFWIF
Trigger: GAAGATCCAGAACAGCCTCCAAAACCACCTTTTGCA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAACTGGATGTTTCCTCTaGCTTAAAAGCTCTTTTATT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTTGCFL*LKSSFI
Trigger: AATAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACGCTGTTTCTCACGGTTaGCAATCTCTTCCTTTAACA +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNAVSHG*QSLPLT
Trigger: TGTTAAAGGAAGAGATTGCCAACCGTGAGAAACAGC...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTGGTTCGATAATATaGACTAAATCTGTAGGACTT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTLGSII*TKSVGL
Trigger: AAGTCCTACAGATTTAGTCCATATTATCGAACCAAG...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATTTGTAGGTTGTAAATaGAGGAGTATGACCTTTACT +
Preference number: 4 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTFVGCK*RSMTFT
Trigger: AGTAAAGGTCATACTCCTCCATTTACAACCTACAAA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACGCTGGAACATTTATTTaGTTCTCTGGCTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNAGTFI*FSGWKA
Trigger: TGCTTTCCAGCCAGAGAACCAAATAAATGTTCCAGC...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAAACTGTATCCAGAGCTaGAACATTTATTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: QPWILNPKQESLRHQRVSNCIQS*NIYLVL
Trigger: GAGAACCAAATAAATGTTCCAGCTCTGGATACAGTT...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTGTATCTGACATCATCTaGAGTGACAACTGTATCCAG +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLVSDII*SDNCIQ
Trigger: CTGGATACAGTTGTCACTCCAGATGATGTCAGATAC...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTAAAGCTTTGATAATCTaGAGCATATTCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAKALII*SIFNSC
Trigger: ACAGCTGTTGAATATGCTCCAGATTATCAAAGCTTT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTACCTCTCCAGGAGTTaGTGCAGAGCAATCATGTTT +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAYLSRS*CRAIMF
Trigger: AAACATGATTGCTCTGCACCAACTCCTGGAGAGGTA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGAGAGCTTCCAGCAACTaGCAGTTAATAGGACATGAT +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLRASSN*QLIGHD
Trigger: ATCATGTCCTATTAACTGCCAGTTGCTGGAAGCTCT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTACCGTTCCAAGGTTTTaGAATGCTGGGTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNATVPRF*NAGSLE
Trigger: TTCCAAAGACCCAGCATTCCAAAACCTTGGAACGGT...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCTGACTCCAATCTCTTaGCACTTGGAAACTAGTTTT +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPLTPIS*HLETSF
Trigger: AAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACTGTTCTTCCTGATTTaGGAGATCTCGAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAILFFLI*EISNFS
Trigger: AGAAAAATTCGAGATCTCTCAAATCAGGAAGAACAG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTTCTGTATCCTAGGCTaGGACACTGTGTTAATACTG +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNAFCILG*DTVLIL
Trigger: CAGTATTAACACAGTGTCTCAGCCTAGGATACAGAA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTAGCCATCTGGTCCATTaGCATTCGATCTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNASHLVH*HSIFVY
Trigger: GTAAACAAAGATCGAATGTCAATGGACCAGATGGCT...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTCTTCCCATTCATGTTaGAGTAACCTCAATGCAAGT +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLSSHSC*SNLNAS
Trigger: ACTTGCATTGAGGTTACTTCAACATGAATGGGAAGA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGTTCTGTAAGGCTCTCTaGTATAAACGGTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLFCKAL*YKRWTS
Trigger: AGAGGTCCACCGTTTATATCAGAGAGCCTTACAGAA...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAATTAGTACTTGTCTCTaGACAACCAATCAAAGACAG +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIISTCL*TTNQRQ
Trigger: CTGTCTTTGATTGGTTGTGCAGAGACAAGTACTAAT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGATTTGTAGGTTGTAAATaGAGGAGTATGACCTTTACT +
Preference number: 4 (lower is better)
Translates to: QSRQGVQNVERVINNPDRFVGCK*RSMTFT
Trigger: AGTAAAGGTCATACTCCTCCATTTACAACCTACAAA...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGAAAGCATACTTAATTaGTCCTGTAGACTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLESILN*SCRLFL
Trigger: GAGGAACAGTCTACAGGACCAATTAAGTATGCTTTC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTATTGCCAGTGCACTTTaGCATCTTCCAGTAAATATG +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLIASAL*HLPVNM
Trigger: CATATTTACTGGAAGATGCCAAAGTGCACTGGCAAT...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTAAATTTCCGCAAAAATaGAAGAAGATTATCGCCTCG +
Preference number: 4 (lower is better)
Translates to: VKQSRQGVQNVERVINNPKFPQK*KKIIAS
Trigger: CGAGGCGATAATCTTCTTCCATTTTTGCGGAAATTT...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGGAATGCTGGGTCTTTaGAACACAGCTCAAATAAAA +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLGMLGL*NTAQIK
Trigger: TTTTATTTGAGCTGTGTTCCAAAGACCCAGCATTCC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTTATCTTGTAATCCTTaGCTAGAATCAGTAGTGTCG +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLLSCNP*LESVVS
Trigger: CGACACTACTGATTCTAGTCAAGGATTACAAGATAA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTTTATCTTGTAATCCTTaGCTAGAATCAGTAGTGTCG +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFILSCNP*LESVVS
Trigger: CGACACTACTGATTCTAGTCAAGGATTACAAGATAA...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTCACCAACCAATTTCATaGATCGATTGTACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIHQPIS*IDCTVL
Trigger: AAGAACAGTACAATCGATTCATGAAATTGGTTGGTG...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGTTCTGTATCCTAGGCTaGGACACTGTGTTAATACTG +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLFCILG*DTVLIL
Trigger: CAGTATTAACACAGTGTCTCAGCCTAGGATACAGAA...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTGTCTTCAGCTGATCTaGTTTAATCAAACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLCLQLI*FNQTLF
Trigger: AAACAGCGTTTGATTAAATCAGATCAGCTGAAGACA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTTTTTACTTTGTGCTGTaGCAAAATCCACATCTACAG +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIFYFVL*QNPHLQ
Trigger: CTGTAGATGTGGATTTTGTCACAGCACAAAGTAAAA...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGTTTTACTTTGTGCTGTaGCAAAATCCACATCTACAG +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLFYFVL*QNPHLQ
Trigger: CTGTAGATGTGGATTTTGTCACAGCACAAAGTAAAA...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGATTAGCTGGCATAACTaGACAAAACCGTTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLISWHN*TKPFQG
Trigger: ACCTTGGAACGGTTTTGTTCAGTTATGCCAGCTAAT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTCTTCCCATTCATGTTaGAGTAACCTCAATGCAAGT +
Preference number: 4 (lower is better)
Translates to: LPVLRTGYCRELDMINNASSHSC*SNLNAS
Trigger: ACTTGCATTGAGGTTACTTCAACATGAATGGGAAGA...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCTGACTGTGGGAATCTaGGTACAAAACTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLLTVGI*VQNFLK
Trigger: TTTCAGGAAGTTTTGTACTCAGATTCCCACAGTCAG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR GCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGATTTTGTTGTTCCTTTaGTTTAAGGGCACGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLILLFL*FKGTGF
Trigger: GAAGCCCGTGCCCTTAAAGCAAAGGAACAACAAAAT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGATCTTCTTCGCTCTCTaGTTGAACCAGACAAAATTT +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLIFFAL*LNQTKF
Trigger: AAATTTTGTCTGGTTCAAGCAGAGAGCGAAGAAGAT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATATTAGCAGTATCAGTGTaGTTAAGGTTAGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAILAVSV*LRLGLV
Trigger: TACTAAACCTAACCTTAAGCACACTGATACTGCTAA...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGTTAGCAGTATCAGTGTaGTTAAGGTTAGGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWLAVSV*LRLGLV
Trigger: TACTAAACCTAACCTTAAGCACACTGATACTGCTAA...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTCTCCGACTCCGTATCTaGCTGTTATTATCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVILRLRI*LLLSSS
Trigger: TGACGACGATAATAACAGCCAGATACGGAGTCGGAG...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTACCTTCCAAAACTTTTaGAGCTCTTCCGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVITFQNF*SSSEVE
Trigger: CTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGT...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGTTCCTCTTCCACAACTaGAGAGATATTTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLFLFHN*RDILLF
Trigger: GAACAACAAAATATCTCTCCAGTTGTGGAAGAGGAA...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGAGAGCTTCCAGCAACTaGCAGTTAATAGGACATGAT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLRASSN*QLIGHD
Trigger: ATCATGTCCTATTAACTGCCAGTTGCTGGAAGCTCT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACTATGAAATTCATAGTTaGACCAGTAATCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: QVKQSRQGVQNVERVINNYEIHS*TSNQHC
Trigger: GCAGTGCTGATTACTGGTCCAACTATGAATTTCATA...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTATGAAATTCATAGTTaGACCAGTAATCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLYEIHS*TSNQHC
Trigger: GCAGTGCTGATTACTGGTCCAACTATGAATTTCATA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGATTACATTTTCCAGGTaGCCAGGCATGTTGGGATAT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLITFSR*PGMLGY
Trigger: ATATCCCAACATGCCTGGCCACCTGGAAAATGTAAT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGAGCCAAAGTTGTACATaGGAAGGATTTTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLSQSCT*EGFSST
Trigger: TGTGCTTGAAAATCCTTCTCATGTACAACTTTGGCT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGTCAGAGAGTGTCAAGTaGGTCAGGAATAACACAAAA +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLSESVK*VRNNTK
Trigger: TTTTGTGTTATTCCTGACTCACTTGACACTCTCTGA...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTGCACATTCTCTTCTTTaGTACTCAATGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLAHSLL*YSMLVF
Trigger: AAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGC...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCTTATCAGTGCTAGTTTaGTCCTCGAAGTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTLSVLV*SSKFNV
Trigger: AACATTGAACTTCGAGGACCAAACTAGCACTGATAA...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGACTGGATGTTTCCTCTaGCTTAAAAGCTCTTTTATT +
Preference number: 4 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLTGCFL*LKSSFI
Trigger: AATAAAAGAGCTTTTAAGCCAGAGGAAACATCCAGT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTCTTGGTTCGATAATATaGACTAAATCTGTAGGACTT +
Preference number: 4 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFILGSII*TKSVGL
Trigger: AAGTCCTACAGATTTAGTCCATATTATCGAACCAAG...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCAAAGCTTTGATAATCTaGAGCATATTCAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: KSSFRLTPISWHLETSFLKALII*SIFNSC
Trigger: ACAGCTGTTGAATATGCTCCAGATTATCAAAGCTTT...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGGGAATGCTGGGTCTTTaGAACACAGCTCAAATAAAA +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLGMLGL*NTAQIK
Trigger: TTTTATTTGAGCTGTGTTCCAAAGACCCAGCATTCC...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGGGTGGCCAGGCATGTTaGGATATTATATGTAAACAT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLGGQAC*DIICKH
Trigger: ATGTTTACATATAATATCCCAACATGCCTGGCCACC...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCTGTTCTTCCTGATTTaGGAGATCTCGAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLLFFLI*EISNFS
Trigger: AGAAAAATTCGAGATCTCTCAAATCAGGAAGAACAG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGTTGTACTGTTCTTCCTaGTTTGAGAGATCTCGAATT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLLYCSS*FERSRI
Trigger: AATTCGAGATCTCTCAAATCAGGAAGAACAGTACAA...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR GCA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCGCACATTCTCTTCTTTaGTACTCAATGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTAHSLL*YSMLVF
Trigger: AAAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGC...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGTTATCAGTGCTAGTTTaGTCCTCGAAGTTCAATGTT +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLLSVLV*SSKFNV
Trigger: AACATTGAACTTCGAGGACCAAACTAGCACTGATAA...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CCA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGAACTGTATCCAGAGCTaGAACATTTATTTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: VLRTGYCRELDMINNACLNCIQS*NIYLVL
Trigger: GAGAACCAAATAAATGTTCCAGCTCTGGATACAGTT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR TCA 90 bp TCAATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCTTAATTCCATTACCTTaGCTAGAATCAGTAGTGTCG +
Preference number: 4 (lower is better)
Translates to: SMKYTAKTSSYYFRGRRVLIPLP*LESVVS
Trigger: CGACACTACTGATTCTAGTCAAGGTAATGGAATTAA...GACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR TCA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTAACATCCATTCACGCTaGAAATTTCAAACCAGGAAT +
Preference number: 4 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVINIHSR*KFQTRN
Trigger: ATTCCTGGTTTGAAATTTTCAGCGTGAATGGATGTT...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS GCA 90 bp CCACTCCTCGCCCCCGACTCCAGCGACTCCCACCCCGGTAAGGCCTaGCTCGAAAGCGGAAACGGTCCAAGGCGAGGTGGCTCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: PLLAPDSSDSHPGKA*LESGNGPRRGGSAP
Trigger: GGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTTCGAGGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 90 bp TTCTTCCTTCGGCGAGAGGCCACTGGAGGCCGGGGCCGGAGTATCTaGGGTCGCCATCCGGGGAGCAGCGCCTTCCACACAACCTTAGCC +
Preference number: 5 (lower is better)
Translates to: FFLRREATGGRGRSI*GRHPGSSAFHTTLA
Trigger: GGCTAAGGTTGTGTGGAAGGCGCTGCTCCCCGGATGGCGACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 90 bp TGGAGAGGGCTCTCGCCAGCTCTGACTGCTGCTGAACCCGGATCCTaGTCCTCCTCCCAGAGGAGGTCTGCACCCCGGCTTGCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: WRGLSPALTAAEPGS*SSSQRRSAPRLASS
Trigger: CGAGGAGGCAAGCCGGGGTGCAGACCTCCTCTGGGAGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAGAGCCCTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS TCA 90 bp GATGAGACCGGAACGGTTCTTTGGGTCGGTAGCTGCTGGGTCCCCTaGGGTGGCCCCGCTCAGACGCGTGCCGCGAGCGTGAGAAATTCC +
Preference number: 5 (lower is better)
Translates to: DETGTVLWVGSCWVP*GGPAQTRAASVRNS
Trigger: GGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCACCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS TCA 90 bp GTGGCTCCGCTCCCAGAAAGACGGCCGGGGACTGCTTTCGGACAGTaGGCTCGAAGGCATCCGTACAGAAGGCGGATGAGACCGGAACGG +
Preference number: 5 (lower is better)
Translates to: VAPLPERRPGTAFGQ*ARRHPYRRRMRPER
Trigger: CCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGAGCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 90 bp GAGGCCTTCGCCGCGGATAGGGTAACAGCCCGCCGCCGCTGCTGCTaGTGCTGCTCCGACTCCGTATCTGGCTGTTATTATCGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: EAFAADRVTARRRCC*CCSDSVSGCYYRRH
Trigger: GTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGCTGTTACCCTATCCGCGGCGAAGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 90 bp GGTCCAAGGCGAGGTGGCTCCGCTCCCAGAAAGACGGCCGGGGACTaGTTTCGGACAGTGAGCTCGAAGGCATCCGTACAGAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: GPRRGGSAPRKTAGD*FRTVSSKASVQKAD
Trigger: ATCCGCCTTCTGTACGGATGCCTTCGAGCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS CCA 90 bp GCATCCAGCGCCGACCGCCACGTTAAGGATACAGCTCTTCCGAGGTaGAGAGGGCTCTCGCCAGCTCTGACTGCTGCTGAACCCGGATCC +
Preference number: 5 (lower is better)
Translates to: ASSADRHVKDTALPR*RGLSPALTAAEPGS
Trigger: GGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAGAGCCCTCTCCACCTCGGAAGAGCTGTATCCTTAACGTGGCGGTCGGCGCTGGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549407.1
CDS CCA 90 bp GGATCCGCCCGACAATTGCCTCGTTTCCCTTCTTTCCTAACGGACTaGGTCGGTGCGGTCTTACCCTACTCGGACACCAAGCGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GSARQLPRFPSFLTD*VGAVLPYSDTKRPL
Trigger: CAGAGGCCGCTTGGTGTCCGAGTAGGGTAAGACCGCACCGACCCAGTCCGTTAGGAAAGAAGGGAAACGAGGCAATTGTCGGGCGGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 90 bp CCGACAATTGCCTCGTTTCCCTTCTTTCCTAACGGACTGGGTCGGTaGGGTCTTACCCTACTCGGACACCAAGCGGCCTCTGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: PTIASFPFFPNGLGR*GLTLLGHQAASAPQ
Trigger: TTGGGGAGCAGAGGCCGCTTGGTGTCCGAGTAGGGTAAGACCGCACCGACCCAGTCCGTTAGGAAAGAAGGGAAACGAGGCAATTGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGGTCTGCACCCCGGCTaGCCTCCTCGCTCACCCACT +
Preference number: 5 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLGLHPG*PPRSPT
Trigger: AGTGGGTGAGCGAGGAGGCAAGCCGGGGTGCAGACC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGGATCCGCCCGACAATaGCCTCGTTTCCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPGSARQ*PRFPSF
Trigger: GAAAGAAGGGAAACGAGGCAATTGTCGGGCGGATCC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACTTTCCTAGCGCCCCCTaGCTCCTCAGCGATCGGGGT +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNFPSAP*LLSDRG
Trigger: ACCCCGATCGCTGAGGAGCAAGGGGGCGCTAGGAAA...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378743.9
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGTTGGATGTTTCCTGCTaGGCTGCTCCCATCAGAAAC +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPLDVSC*AAPIRN
Trigger: GTTTCTGATGGGAGCAGCCAAGCAGGAAACATCCAA...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGGGATCCGCCCGACAATaGCCTCGTTTCCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWGSARQ*PRFPSF
Trigger: GAAAGAAGGGAAACGAGGCAATTGTCGGGCGGATCC...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCCTGCAAAAGGTGGTTTaGGAGGCTGTTCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRILQKVV*EAVLDL
Trigger: AAGATCCAGAACAGCCTCCAAAACCACCTTTTGCAG...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCTGGCCCAAAGCGATCTaGTTCCAGTTTACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIWPKAI*FQFTFS
Trigger: GGAAAACGTAAACTGGAACAAGATCGCTTTGGGCCA...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAACCGTTCCAAGGTTTaGGAATGCTGGGTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPNRSKV*ECWVFG
Trigger: TCCAAAGACCCAGCATTCCAAAACCTTGGAACGGTT...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAGTGCAACTAGCAGACTaGTGGCCATGGCAGTTACAC +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSVQLAD*WPWQLH
Trigger: GTGTAACTGCCATGGCCACAAGTCTGCTAGTTGCAC...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 90 bp ATACCTCTCCAGGAGTTGGTGCAGAGCAATCATGTTTGTGTAAAGTaGAAGGCAGGCCTCTATTCTTTCCTCAACAGCAAGGCTCTCATC +
Preference number: 5 (lower is better)
Translates to: IPLQELVQSNHVCVK*KAGLYSFLNSKALI
Trigger: GATGAGAGCCTTGCTGTTGAGGAAAGAATAGAGGCCTGCCTTCCACTTTACACAAACATGATTGCTCTGCACCAACTCCTGGAGAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGTTTCTTCCATGCCTTaGTTTGCTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPVSSMP*FAASSM
Trigger: CATTGAGGAAGCAGCAAACAAAGGCATGGAAGAAAC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGTGCAACTAGCAGACTaGTGGCCATGGCAGTTACAC +
Preference number: 5 (lower is better)
Translates to: VKQSRQGVQNVERVINNPVQLAD*WPWQLH
Trigger: GTGTAACTGCCATGGCCACAAGTCTGCTAGTTGCAC...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTCTGCTTCCTCAATGCTaGTTTAGCTGTAGTGCTAAC +
Preference number: 5 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTALLPQC*FSCSAN
Trigger: GTTAGCACTACAGCTAAACAAGCATTGAGGAAGCAG...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAGGCACAGGATGTGAATaGTTCAGAACTGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSGTGCE*FRTGGE
Trigger: TTCACCTCCAGTTCTGAACAATTCACATCCTGTGCC...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGACACTATTTGTTGACTaGGAAGCCTCTCCATCAGAT +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPTLFVD*EASPSD
Trigger: ATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTGT...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACACTGGGGATGATGAACTaGTCTTCAGCTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTLGMMN*SSADLI
Trigger: AATCAGATCAGCTGAAGACAAGTTCATCATCCCCAG...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTCCAGTCTCATCATTTaGTTTGGCCCAAAGCGATCT +
Preference number: 5 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTASSLII*FGPKRS
Trigger: AGATCGCTTTGGGCCAAACAAAATGATGAGACTGGA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAAGCTGGAACATTTATTaGGTTCTCTGGCTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTSWNIY*VLWLES
Trigger: GCTTTCCAGCCAGAGAACCAAATAAATGTTCCAGCT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATATCCTGCACCTCGTCCTaGGTTCCTCTTTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAISCTSS*VPLFEN
Trigger: GTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGGA...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTCCAATCTCTTGGCACTaGGAAACTAGTTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAPISWH*ETSFLR
Trigger: CCTGAGAAAACTAGTTTCCAAGTGCCAAGAGATTGG...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACAAGAGGATCATGTTCATaGCTTCCGGTTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTRGSCS*LPVLRT
Trigger: TGTCCTCAAAACCGGAAGCAATGAACATGATCCTCT...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 90 bp TTTAAGTGCAGCATCCCCACTTCCTGTACTCTGCTTCTCAGTAAATaGAGATCTACCCATCTGGAAACTTGGAAGTCTTCCTCCCTTGAC +
Preference number: 5 (lower is better)
Translates to: FKCSIPTSCTLLLSK*RSTHLETWKSSSLD
Trigger: GTCAAGGGAGGAAGACTTCCAAGTTTCCAGATGGGTAGATCTTCATTTACTGAGAAGCAGAGTACAGGAAGTGGGGATGCTGCACTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550712.1
CDS CCA 90 bp AAGCGAGATCACAGTTCGTGGAAGACGGGGTCCTCTGTGAAACTTTaGATTCTGTATCCTAGGCTGAGACACTGTGTTAATACTGACTAT +
Preference number: 5 (lower is better)
Translates to: KRDHSSWKTGSSVKL*ILYPRLRHCVNTDY
Trigger: ATAGTCAGTATTAACACAGTGTCTCAGCCTAGGATACAGAATCCAAAGTTTCACAGAGGACCCCGTCTTCCACGAACTGTGATCTCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATTATCAGTGCTAGTTaGGTCCTCGAAGTTCAATGT +
Preference number: 5 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIIISAS*VLEVQC
Trigger: ACATTGAACTTCGAGGACCAAACTAGCACTGATAAT...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCACTGCTTCCTCAATGCTaGTTTAGCTGTAGTGCTAAC +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSLLPQC*FSCSAN
Trigger: GTTAGCACTACAGCTAAACAAGCATTGAGGAAGCAG...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACTCTTCTTCTTCAGCTaGTTTCCGCTGATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAILFFFS*FPLILF
Trigger: GAAGAGGATCAGCGGAAACAAGCTGAAGAAGAAGAG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCACTTCTTGATCTCCTCTaGCCACCAACCAATTTCATG +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSLLDLL*PPTNFM
Trigger: CATGAAATTGGTTGGTGGCAAGAGGAGATCAAGAAG...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAGAGGTACTTTCGGTTTaGAAGCTTGCTCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIEVLSV*KLAQQF
Trigger: GAACTGCTGAGCAAGCTTCAAAACCGAAAGTACCTC...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCGCTGTTTCTCACGGTaGGCAATCTCTTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: VKQSRQGVQNVERVINNPRCFSR*AISSFN
Trigger: GTTAAAGGAAGAGATTGCCAACCGTGAGAAACAGCG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTTCCTGCACCTCGTCCTaGGTTCCTCTTTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFISCTSS*VPLFEN
Trigger: GTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGGA...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACTTGGATGTTTCCTGCTaGGCTGCTCCCATCAGAAAC +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNLDVSC*AAPIRN
Trigger: GTTTCTGATGGGAGCAGCCAAGCAGGAAACATCCAA...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAGCAGAGCAATCATGTTaGTGTAAAGTGGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIAEQSC*CKVEGR
Trigger: CCTGCCTTCCACTTTACACAAACATGATTGCTCTGC...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGCAGAGCAATCATGTTaGTGTAAAGTGGAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VKQSRQGVQNVERVINNPAEQSC*CKVEGR
Trigger: CCTGCCTTCCACTTTACACAAACATGATTGCTCTGC...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGGTAGTGCTAACTTTTTaGGCCGAATGTGTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPVVLTF*AECVFV
Trigger: TACAAAAACACATTCGGCCAAAAAAGTTAGCACTAC...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCTCTTCTTCTTCAGCTaGTTTCCGCTGATCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNLFFFS*FPLILF
Trigger: GAAGAGGATCAGCGGAAACAAGCTGAAGAAGAAGAG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACTTCTTGATCTCCTCTaGCCACCAACCAATTTCATG +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAILLDLL*PPTNFM
Trigger: CATGAAATTGGTTGGTGGCAAGAGGAGATCAAGAAG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGGCACAGGATGTGAATaGTTCAGAACTGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLGTGCE*FRTGGE
Trigger: TTCACCTCCAGTTCTGAACAATTCACATCCTGTGCC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCCACTGATTTATGCTTaGGAAGCGAGATCACAGTTC +
Preference number: 5 (lower is better)
Translates to: VKQSRQGVQNVERVINNPPLIYA*EARSQF
Trigger: GAACTGTGATCTCGCTTCCAAAGCATAAATCAGTGG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GATATAAACGGTGGACCTCTCTTTGTCCCTTTAGAACAATCTCAGCAGCAATGGCCACTGATTTATGCTTaGGAAGCGAGATCACAGTTC +
Preference number: 5 (lower is better)
Translates to: DINGGPLFVPLEQSQQQWPLIYA*EARSQF
Trigger: GAACTGTGATCTCGCTTCCAAAGCATAAATCAGTGG...CCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAGAGGTCCACCGTTTATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTGAGGTACTTTCGGTTTaGAAGCTTGCTCAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLEVLSV*KLAQQF
Trigger: GAACTGCTGAGCAAGCTTCAAAACCGAAAGTACCTC...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCGCTGTTTCTCACGGTaGGCAATCTCTTCCTTTAAC +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNRCFSR*AISSFN
Trigger: GTTAAAGGAAGAGATTGCCAACCGTGAGAAACAGCG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTTTTCCACATCAGAGTTaGCTGGGGATGATGAACTTG +
Preference number: 5 (lower is better)
Translates to: VKQSRQGVQNVERVINNPFPHQS*LGMMNL
Trigger: CAAGTTCATCATCCCCAGCAAACTCTGATGTGGAAA...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGTTGAACTCTGTGAATTaGTTCCTGAAGCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPLNSVN*FLKLLQ
Trigger: TTGAAGAAGCTTCAGGAACAAATTCACAGAGTTCAA...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAAATGCTTTCTTGGACTaGATACTGGAGAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSNAFLD*ILENCP
Trigger: TGGACAGTTCTCCAGTATCAAGTCCAAGAAAGCATT...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTTGGAGAGATATTTTGTaGTTCCTTTGCTTTAAGGGC +
Preference number: 5 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAWRDIL*FLCFKG
Trigger: GCCCTTAAAGCAAAGGAACAACAAAATATCTCTCCA...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AGAATCTGGCAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGTTGTTTATGCATTCTTaGTTAGCAGTATCAGTGTGC +
Preference number: 5 (lower is better)
Translates to: RIWQGLEAGQTGSSFIQPLFMHS*LAVSVC
Trigger: GCACACTGATACTGCTAACAAAGAATGCATAAACAA...CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATTAGTCTTTACATCTaGAACAGCTTGCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAISLYI*NSLPWH
Trigger: ATGCCATGGCAAGCTGTTCAAGATGTAAAGACTAAT...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACATACCTCTCCAGGAGTaGGTGCAGAGCAATCATGTT +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNIPLQE*VQSNHV
Trigger: AACATGATTGCTCTGCACCAACTCCTGGAGAGGTAT...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCGAGATGGAATGTCAATaGGTCCTGGAATATTTAAGA +
Preference number: 5 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIEMECQ*VLEYLR
Trigger: TCTTAAATATTCCAGGACCAATTGACATTCCATCTC...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGGCCTAGAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCCCACAAATAAGGAACTaGGTGGTTAAACATATCATC +
Preference number: 5 (lower is better)
Translates to: QGLEAGQTGSSFIQPKRIPQIRN*VVKHII
Trigger: GATGATATGTTTAACCACCAAGTTCCTTATTTGTGG...GATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACAACCGTTCCAAGGTTTaGGAATGCTGGGTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNNRSKV*ECWVFG
Trigger: TCCAAAGACCCAGCATTCCAAAACCTTGGAACGGTT...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTAGAGGATCATGTTCATaGCTTCCGGTTTTGAGGACA +
Preference number: 5 (lower is better)
Translates to: VKQSRQGVQNVERVINNPRGSCS*LPVLRT
Trigger: TGTCCTCAAAACCGGAAGCAATGAACATGATCCTCT...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTGGATCCGCCCGACAATaGCCTCGTTTCCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIGSARQ*PRFPSF
Trigger: GAAAGAAGGGAAACGAGGCAATTGTCGGGCGGATCC...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CAA 90 bp ACCCTGATAGAGCATTCAAGTGCAACTAGCAGACTTGTGGCCATGGCAGTTACATGCACATTCTCTTCTTaGCTACTCAATGCTAGTTTT +
Preference number: 5 (lower is better)
Translates to: TLIEHSSATSRLVAMAVTCTFSS*LLNASF
Trigger: AAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGCA...TGTAACTGCCATGGCCACAAGTCTGCTAGTTGCACTTGAATGCTCTATCAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGGTTTCTTCCATGCCTTaGTTTGCTGCTTCCTCAATG +
Preference number: 5 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLVSSMP*FAASSM
Trigger: CATTGAGGAAGCAGCAAACAAAGGCATGGAAGAAAC...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCATTGATAGATTGCTTCTaGGCACAGGATGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSLIDCF*AQDVNC
Trigger: ACAATTCACATCCTGTGCCAAGAAGCAATCTATCAA...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATACTGACTATTGATAGATaGCTTCTTGGCACAGGATGT +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAILTIDR*LLGTGC
Trigger: ACATCCTGTGCCAAGAAGCAATCTATCAATAGTCAG...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTCACCAAAAACACTATTaGTTGACTTGGAAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VKQSRQGVQNVERVINNPHQKHY*LTWKPL
Trigger: GAGAGGCTTCCAAGTCAACAAATAGTGTTTTTGGTG...AGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCTTTCCACATCAGAGTTaGCTGGGGATGATGAACTTG +
Preference number: 5 (lower is better)
Translates to: KSSFRLTPISWHLETSFLFPHQS*LGMMNL
Trigger: CAAGTTCATCATCCCCAGCAAACTCTGATGTGGAAA...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGATGGAGAGATATTTTGTaGTTCCTTTGCTTTAAGGGC +
Preference number: 5 (lower is better)
Translates to: QSRQGVQNVERVINNPDRWRDIL*FLCFKG
Trigger: GCCCTTAAAGCAAAGGAACAACAAAATATCTCTCCA...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAGCTAAGTGTATAGTCTaGTATATGCTGCCATTGACA +
Preference number: 5 (lower is better)
Translates to: QSRQGVQNVERVINNPDRAKCIV*YMLPLT
Trigger: TGTCAATGGCAGCATATACAAGACTATACACTTAGC...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGAGCTGGAACATTTATTaGGTTCTCTGGCTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLSWNIY*VLWLES
Trigger: GCTTTCCAGCCAGAGAACCAAATAAATGTTCCAGCT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAATTAGTCTTTACATCTaGAACAGCTTGCCATGGCAT +
Preference number: 5 (lower is better)
Translates to: QSRQGVQNVERVINNPDRISLYI*NSLPWH
Trigger: ATGCCATGGCAAGCTGTTCAAGATGTAAAGACTAAT...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GCAACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTCCACAAATAAGGAACTaGGTGGTTAAACATATCATC +
Preference number: 5 (lower is better)
Translates to: ATSRLVAMAVTLSLRWTAPQIRN*VVKHII
Trigger: GATGATATGTTTAACCACCAAGTTCCTTATTTGTGG...AGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTCCAATCTCTTGGCACTaGGAAACTAGTTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIPISWH*ETSFLR
Trigger: CCTGAGAAAACTAGTTTCCAAGTGCCAAGAGATTGG...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 90 bp ATTTCCACATCAGAGTTTGCTGGGGATGATGAACTTGTCTTCAGCTaGTCTGATTTAATCAAACGCTGTTTCTCACGGTTGGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: ISTSEFAGDDELVFS*SDLIKRCFSRLAIS
Trigger: AGAGATTGCCAACCGTGAGAAACAGCGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCATCATCCCCAGCAAACTCTGATGTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 90 bp AGCTGTTTCACACATTTCCTGCACCTCGTCCTTGGTTCCTCTTTTTaGGAACAATCTGAGGTAATGGCACCAAATTTCTGGATTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SCFTHFLHLVLGSSF*EQSEVMAPNFWIVF
Trigger: AAAGACAATCCAGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGGAAATGTGTGAAACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCCTGATAGAACTGTTCTTCCTGATTaGAGAGATCTCGAATTTTTC +
Preference number: 5 (lower is better)
Translates to: QSRQGVQNVERVINNPDRTVLPD*RDLEFF
Trigger: GAAAAATTCGAGATCTCTCAAATCAGGAAGAACAGT...TCTATCAGGGTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCTGCAAAAGGTGGTTTaGGAGGCTGTTCTGGATCTT +
Preference number: 5 (lower is better)
Translates to: VLRTGYCRELDMINNACLLQKVV*EAVLDL
Trigger: AAGATCCAGAACAGCCTCCAAAACCACCTTTTGCAG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCTGACTATTGATAGATaGCTTCTTGGCACAGGATGT +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNLTIDR*LLGTGC
Trigger: ACATCCTGTGCCAAGAAGCAATCTATCAATAGTCAG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTACACTATTTGTTGACTaGGAAGCCTCTCCATCAGAT +
Preference number: 5 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLTLFVD*EASPSD
Trigger: ATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTGT...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTCACCAAAAACACTATTaGTTGACTTGGAAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIHQKHY*LTWKPL
Trigger: GAGAGGCTTCCAAGTCAACAAATAGTGTTTTTGGTG...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCAAATTGTAACACGCTGTaGAACTCTGTGAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSNCNTL*NSVNLF
Trigger: GAACAAATTCACAGAGTTCAACAGCGTGTTACAATT...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGTGGCCCAAAGCGATCTaGTTCCAGTTTACGTTTTCC +
Preference number: 5 (lower is better)
Translates to: VLRTGYCRELDMINNACLWPKAI*FQFTFS
Trigger: GGAAAACGTAAACTGGAACAAGATCGCTTTGGGCCA...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGAATGCTTTCTTGGACTaGATACTGGAGAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: KQAKQEVHLSNRRGSCSLNAFLD*ILENCP
Trigger: TGGACAGTTCTCCAGTATCAAGTCCAAGAAAGCATT...CAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACCAGCCATCTGGTCCATaGACATTCGATCTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNQPSGP*TFDLCL
Trigger: TAAACAAAGATCGAATGTCAATGGACCAGATGGCTG...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGCCCTGGATATTAAATCCCAAACAGGAATCTCTCAGGCATCAGAGAGTGTCATTACTTTCATTGATATaGCTAACAAGGAGAACAGCC +
Preference number: 5 (lower is better)
Translates to: QPWILNPKQESLRHQRVSLLSLI*LTRRTA
Trigger: GGCTGTTCTCCTTGTTAGCAATATCAATGAAAGTAA...TGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATTTAATATCCAGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAAAGCTTGAGCCAAAGTaGTACATGAGAAGGATTTTC +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAIKLEPK*YMRRIF
Trigger: GAAAATCCTTCTCATGTACAACTTTGGCTCAAGCTT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAAATTGCCAGTGCACTTaGGCATCTTCCAGTAAATAT +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAINCQCT*ASSSKY
Trigger: ATATTTACTGGAAGATGCCAAAGTGCACTGGCAATT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GAAGCAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTATGCATTCTGTAAAATaGCCAGTGCACTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: EAGQTGSSFIQPKRIMFIMHSVK*PVHFGI
Trigger: GATGCCAAAGTGCACTGGCAATTTTACAGAATGCAT...AATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACATGCATTCTGTAAAATaGCCAGTGCACTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNMHSVK*PVHFGI
Trigger: GATGCCAAAGTGCACTGGCAATTTTACAGAATGCAT...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGATACCTCTCCAGGAGTaGGTGCAGAGCAATCATGTT +
Preference number: 5 (lower is better)
Translates to: VLRTGYCRELDMINNACLIPLQE*VQSNHV
Trigger: AACATGATTGCTCTGCACCAACTCCTGGAGAGGTAT...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 90 bp TCTTCCTCTCTTTTCCTTCTCTCTTCTTCTTCAGCTTGTTTCCGCTaGTCCTCTTCTTTCTGTCTTTCCTGCTCTTTTTGTTGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: SSSLFLLSSSSACFR*SSSFCLSCSFCCCS
Trigger: ACTACAACAACAAAAAGAGCAGGAAAGACAGAAAGAAGAGGATCAGCGGAAACAAGCTGAAGAAGAAGAGAGAAGGAAAAGAGAGGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 90 bp AACAATCTCAGCAGCAATGGCTATTTTCCAGGTGGCCAGGCATGTTaGGATATTATATGTAAACATCTTGGCTTGAAGTTTCAGAATCTG +
Preference number: 5 (lower is better)
Translates to: NNLSSNGYFPGGQAC*DIICKHLGLKFQNL
Trigger: CAGATTCTGAAACTTCAAGCCAAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGGAAAATAGCCATTGCTGCTGAGATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378743.9
CDS-3UTR CAA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTATTATCAGTGCTAGTTaGGTCCTCGAAGTTCAATGT +
Preference number: 5 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLIISAS*VLEVQC
Trigger: ACATTGAACTTCGAGGACCAAACTAGCACTGATAAT...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACTTGATAGATTGCTTCTaGGCACAGGATGTGAATTGT +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNLIDCF*AQDVNC
Trigger: ACAATTCACATCCTGTGCCAAGAAGCAATCTATCAA...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCTGGGGATGATGAACTaGTCTTCAGCTGATCTGATT +
Preference number: 5 (lower is better)
Translates to: VLRTGYCRELDMINNACLLGMMN*SSADLI
Trigger: AATCAGATCAGCTGAAGACAAGTTCATCATCCCCAG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp ACTAGCAGACTTGTGGCCATGGCAGTTACACTTTCCTTAAGATGGACTGCTATAAATTGTAACACGCTGTaGAACTCTGTGAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: TSRLVAMAVTLSLRWTAINCNTL*NSVNLF
Trigger: GAACAAATTCACAGAGTTCAACAGCGTGTTACAATT...TATAGCAGTCCATCTTAAGGAAAGTGTAACTGCCATGGCCACAAGTCTGCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGTCCAGTCTCATCATTTaGTTTGGCCCAAAGCGATCT +
Preference number: 5 (lower is better)
Translates to: VLRTGYCRELDMINNACLSSLII*FGPKRS
Trigger: AGATCGCTTTGGGCCAAACAAAATGATGAGACTGGA...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAAGTTAAACAGTCTCGGCAAGGAGTCCAGAACGTAGAAAGGGTAATAAACAACTTCTTCGCTCTCTGCTaGAACCAGACAAAATTTCAT +
Preference number: 5 (lower is better)
Translates to: QVKQSRQGVQNVERVINNFFALC*NQTKFH
Trigger: ATGAAATTTTGTCTGGTTCAAGCAGAGAGCGAAGAA...GTTGTTTATTACCCTTTCTACGTTCTGGACTCCTTGCCGAGACTGTTTAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCAAGCTTGAGCCAAAGTaGTACATGAGAAGGATTTTC +
Preference number: 5 (lower is better)
Translates to: KSSFRLTPISWHLETSFLKLEPK*YMRRIF
Trigger: GAAAATCCTTCTCATGTACAACTTTGGCTCAAGCTT...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS TCA 90 bp ACATTTCCTGCACCTCGTCCTTGGTTCCTCTTTTTGAGAACAATCTaGGGTAATGGCACCAAATTTCTGGATTGTCTTTGTTATTTTCCA +
Preference number: 5 (lower is better)
Translates to: TFPAPRPWFLFLRTI*GNGTKFLDCLCYFP
Trigger: TGGAAAATAACAAAGACAATCCAGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGGAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS GCA 90 bp AGCTTTTGTAACCGTCTTTTCTCCATAGCAATTAGTTCTGCTGAATaGTTTCTTGGACTTGATACTGGAGAACTGTCCAGTCTCATCATT +
Preference number: 5 (lower is better)
Translates to: SFCNRLFSIAISSAE*FLGLDTGELSSLII
Trigger: AATGATGAGACTGGACAGTTCTCCAGTATCAAGTCCAAGAAAGCATTCAGCAGAACTAATTGCTATGGAGAAAAGACGGTTACAAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378743.9
ENST00000546606.1
ENST00000552994.5
CDS CCA 90 bp TGTAAAGTATCTGACATCATCTGGAGTGACAACTGTATCCAGAGCTaGAACATTTATTTGGTTCTCTGGCTGGAAAGCATACTTAATTGG +
Preference number: 5 (lower is better)
Translates to: CKVSDIIWSDNCIQS*NIYLVLWLESILNW
Trigger: CCAATTAAGTATGCTTTCCAGCCAGAGAACCAAATAAATGTTCCAGCTCTGGATACAGTTGTCACTCCAGATGATGTCAGATACTTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CAGGCCAAACAGGAAGTTCATTTATCCAACCGAAGAGGATCATGTTCATTGCTTTTGAACTCTGTGAATTaGTTCCTGAAGCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: QAKQEVHLSNRRGSCSLLLNSVN*FLKLLQ
Trigger: TTGAAGAAGCTTCAGGAACAAATTCACAGAGTTCAA...AAGCAATGAACATGATCCTCTTCGGTTGGATAAATGAACTTCCTGTTTGGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp AAGAGCTCATTTAGGCTGACTCCAATCTCTTGGCACTTGGAAACTAGTTTTCTCTTGTTTATGCATTCTTaGTTAGCAGTATCAGTGTGC +
Preference number: 5 (lower is better)
Translates to: KSSFRLTPISWHLETSFLLFMHS*LAVSVC
Trigger: GCACACTGATACTGCTAACAAAGAATGCATAAACAA...GAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAGCCTAAATGAGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGCAGCCATCTGGTCCATaGACATTCGATCTTTGTTTA +
Preference number: 5 (lower is better)
Translates to: VLRTGYCRELDMINNACLQPSGP*TFDLCL
Trigger: TAAACAAAGATCGAATGTCAATGGACCAGATGGCTG...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTAATTGCCAGTGCACTTaGGCATCTTCCAGTAAATAT +
Preference number: 5 (lower is better)
Translates to: LPVLRTGYCRELDMINNANCQCT*ASSSKY
Trigger: ATATTTACTGGAAGATGCCAAAGTGCACTGGCAATT...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 90 bp TCATCATCATTACATGTTCCTGTTAAATCAAAACGGCAGAAACACTaGTCCGGTTCAATCATATTACTGTATGATACTGAGCTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SSSLHVPVKSKRQKH*SGSIILLYDTELRG
Trigger: TCCCCTGAGCTCAGTATCATACAGTAATATGATTGAACCGGATCAGTGTTTCTGCCGTTTTGATTTAACAGGAACATGTAATGATGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp TCCATTCACGCTGAAAATTTCAAACCAGGAATAGGAGTAAAACCCTCCTTTACCTGCACATTCTCTTCTTaGCTACTCAATGCTAGTTTT +
Preference number: 5 (lower is better)
Translates to: SIHAENFKPGIGVKPSFTCTFSS*LLNASF
Trigger: AAAACTAGCATTGAGTAGCAAAGAAGAGAATGTGCA...GGTAAAGGAGGGTTTTACTCCTATTCCTGGTTTGAAATTTTCAGCGTGAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS-3UTR CAA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTGTAGTGCTAACTTTTTaGGCCGAATGTGTTTTTGTA +
Preference number: 5 (lower is better)
Translates to: LPVLRTGYCRELDMINNAVVLTF*AECVFV
Trigger: TACAAAAACACATTCGGCCAAAAAAGTTAGCACTAC...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTACTGTTCTTCCTGATTaGAGAGATCTCGAATTTTTC +
Preference number: 5 (lower is better)
Translates to: LPVLRTGYCRELDMINNATVLPD*RDLEFF
Trigger: GAAAAATTCGAGATCTCTCAAATCAGGAAGAACAGT...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp GTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTTGTCTGGCTAAGTGTATAGTCTaGTATATGCTGCCATTGACA +
Preference number: 5 (lower is better)
Translates to: VLRTGYCRELDMINNACLAKCIV*YMLPLT
Trigger: TGTCAATGGCAGCATATACAAGACTATACACTTAGC...CAGACAAGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS-3UTR CAA 90 bp CTTCCGGTTTTGAGGACAGGATATTGTAGGGAACTTGATATGATCAATAACGCTGAGATGGAATGTCAATaGGTCCTGGAATATTTAAGA +
Preference number: 5 (lower is better)
Translates to: LPVLRTGYCRELDMINNAEMECQ*VLEYLR
Trigger: TCTTAAATATTCCAGGACCAATTGACATTCCATCTC...AGCGTTATTGATCATATCAAGTTCCCTACAATATCCTGTCCTCAAAACCGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 90 bp CTGAAGATTTACTTCTTGATCTCCTCTTGCCACCAACCAATTTCATaGATCGATTGTACTGTTCTTCCTGATTTGAGAGATCTCGAATTT +
Preference number: 5 (lower is better)
Translates to: LKIYFLISSCHQPIS*IDCTVLPDLRDLEF
Trigger: AAATTCGAGATCTCTCAAATCAGGAAGAACAGTACAATCGATTCATGAAATTGGTTGGTGGCAAGAGGAGATCAAGAAGTAAATCTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 90 bp ATGTACATGATTGTTGCATTACATTTTCCAGGTGGCCAGGCATGTTaGGATATTATATGTAAACATCTTGGCTTGAAGTTTCAGAATCTG +
Preference number: 5 (lower is better)
Translates to: MYMIVALHFPGGQAC*DIICKHLGLKFQNL
Trigger: CAGATTCTGAAACTTCAAGCCAAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGGAAAATGTAATGCAACAATCATGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551487.1
ENST00000552994.5
CDS CCA 90 bp TCTTTACTTGAATCCTTTGTAATACTGACATTATCAGTGCTAGTTTaGTCCTCGAAGTTCAATGTTTTAGGATCTTCCTGCACATTCTCT +
Preference number: 5 (lower is better)
Translates to: SLLESFVILTLSVLV*SSKFNVLGSSCTFS
Trigger: AGAGAATGTGCAGGAAGATCCTAAAACATTGAACTTCGAGGACCAAACTAGCACTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS-3UTR CAA 90 bp ATGAAGTACACTGCCAAAACAAGTAGTTACTACTTTAGAGGAAGAAGAGTCATTATTATCAGTGCTAGTTaGGTCCTCGAAGTTCAATGT +
Preference number: 5 (lower is better)
Translates to: MKYTAKTSSYYFRGRRVIIISAS*VLEVQC
Trigger: ACATTGAACTTCGAGGACCAAACTAGCACTGATAAT...AATGACTCTTCTTCCTCTAAAGTAGTAACTACTTGTTTTGGCAGTGTACTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS GCA 72 bp CTGCTCCTCCTCCCAGAGGAGGTCTGCACCCCGGCTTaGCTCCTCGCTCACCCACTCCTCGCCCCCGACTCC +
Preference number: 6 (lower is better)
Translates to: LLLLPEEVCTPA*LLAHPLLAPDS
Trigger: GGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCCGGGGTGCAGACCTCCTCTGGGAGGAGGAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS TCA 72 bp GGAACGGTTCTTTGGGTCGGTAGCTGCTGGGTCCCCTaGGGTGGCCCCGCTCAGACGCGTGCCGCGAGCGTG +
Preference number: 6 (lower is better)
Translates to: GTVLWVGSCWVP*GGPAQTRAASV
Trigger: CACGCTCGCGGCACGCGTCTGAGCGGGGCCACCTCAGGGGACCCAGCAGCTACCGACCCAAAGAACCGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 72 bp GCCCCCGACTCCAGCGACTCCCACCCCGGTAAGGCCTaGCTCGAAAGCGGAAACGGTCCAAGGCGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: APDSSDSHPGKA*LESGNGPRRGG
Trigger: GCCACCTCGCCTTGGACCGTTTCCGCTTTCGAGGCAGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS CCA 72 bp CTTCAAGCTCCCCTTCTTCCTTCGGCGAGAGGCCACTaGAGGCCGGGGCCGGAGTATCTGCGGTCGCCATCC +
Preference number: 6 (lower is better)
Translates to: LQAPLLPSARGH*RPGPEYLRSPS
Trigger: GGATGGCGACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS CCA 72 bp GGCCTGCCTCGAAAGCGGAAACGGTCCAAGGCGAGGTaGCTCCGCTCCCAGAAAGACGGCCGGGGACTGCTT +
Preference number: 6 (lower is better)
Translates to: GLPRKRKRSKAR*LRSQKDGRGLL
Trigger: AAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTTCGAGGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 72 bp CTCTCGCCAGCTCTGACTGCTGCTGAACCCGGATCCTaGTCCTCCTCCCAGAGGAGGTCTGCACCCCGGCTT +
Preference number: 6 (lower is better)
Translates to: LSPALTAAEPGS*SSSQRRSAPRL
Trigger: AAGCCGGGGTGCAGACCTCCTCTGGGAGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS TCA 72 bp CCTGAGGTGGCCCCGCTCAGACGCGTGCCGCGAGCGTaGGAAATTCCTCAGCTGCTGCTGAGAAGAGGACGA +
Preference number: 6 (lower is better)
Translates to: PEVAPLRRVPRA*EIPQLLLRRGR
Trigger: TCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCACCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 72 bp CGAGGTGGCTCCGCTCCCAGAAAGACGGCCGGGGACTaGTTTCGGACAGTGAGCTCGAAGGCATCCGTACAG +
Preference number: 6 (lower is better)
Translates to: RGGSAPRKTAGD*FRTVSSKASVQ
Trigger: CTGTACGGATGCCTTCGAGCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS TCA 72 bp CTCCCAGAAAGACGGCCGGGGACTGCTTTCGGACAGTaGGCTCGAAGGCATCCGTACAGAAGGCGGATGAGA +
Preference number: 6 (lower is better)
Translates to: LPERRPGTAFGQ*ARRHPYRRRMR
Trigger: TCTCATCCGCCTTCTGTACGGATGCCTTCGAGCTCACTGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000549407.1
ENST00000552037.1
ENST00000552994.5
CDS GCA 72 bp GCCTCGTTTCCCTTCTTTCCTAACGGACTGGGTCGGTaGGGTCTTACCCTACTCGGACACCAAGCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: ASFPFFPNGLGR*GLTLLGHQAAS
Trigger: AGAGGCCGCTTGGTGTCCGAGTAGGGTAAGACCGCACCGACCCAGTCCGTTAGGAAAGAAGGGAAACGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS CCA 72 bp CCGCCGCTGCTGCTGCTGCTGCTCCGACTCCGTATCTaGCTGTTATTATCGTCGTCACTGATTTCCCCATCT +
Preference number: 6 (lower is better)
Translates to: PPLLLLLLRLRI*LLLSSSLISPS
Trigger: AGATGGGGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS CCA 72 bp CGACAATTGCCTCGTTTCCCTTCTTTCCTAACGGACTaGGTCGGTGCGGTCTTACCCTACTCGGACACCAAG +
Preference number: 6 (lower is better)
Translates to: RQLPRFPSFLTD*VGAVLPYSDTK
Trigger: CTTGGTGTCCGAGTAGGGTAAGACCGCACCGACCCAGTCCGTTAGGAAAGAAGGGAAACGAGGCAATTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS CCA 72 bp TGGAGACCTTCCAAAACTTTTGGAGCTCTTCCGAGGTaGAGAGGGCTCTCGCCAGCTCTGACTGCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: WRPSKTFGALPR*RGLSPALTAAE
Trigger: TTCAGCAGCAGTCAGAGCTGGCGAGAGCCCTCTCCACCTCGGAAGAGCTCCAAAAGTTTTGGAAGGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378743.9
ENST00000548100.1
ENST00000552037.1
ENST00000552994.5
CDS CCA 72 bp AGGCTGGCTCAAAGGTGGCAGAGAAGAAACCTGAGGTaGTGGAGGCAAAGAAAGAGATGGTGCTGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: RLAQRWQRRNLR*WRQRKRWCWRK
Trigger: TTTTCTCCAGCACCATCTCTTTCTTTGCCTCCACCACCTCAGGTTTCTTCTCTGCCACCTTTGAGCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 72 bp AGCCATGGGCAGAACACTGACAAGAAGCCAGGAGTCTaGGTTTTCATTCCTGAGTCTACCTTTACTTGCTGT +
Preference number: 6 (lower is better)
Translates to: SHGQNTDKKPGV*VFIPESTFTCC
Trigger: ACAGCAAGTAAAGGTAGACTCAGGAATGAAAACCCAGACTCCTGGCTTCTTGTCAGTGTTCTGCCCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551487.1
CDS CAA 90 bp TTGCAGCCTCATACCTCTCCAGGAGTTGGTGCAGAGCAATCATGTTaGTGTAAAGTGGAAGGCAGGCCTCTATTCTTTCCTCAACAGCAA +
Preference number: 6 (lower is better)
Translates to: LQPHTSPGVGAEQSC*CKVEGRPLFFPQQQ
Trigger: TTGCTGTTGAGGAAAGAATAGAGGCCTGCCTTCCACTTTACACAAACATGATTGCTCTGCACCAACTCCTGGAGAGGTATGAGGCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 72 bp CACAGTTCGTGGAAGACGGGGTCCTCTGTGAAACTTTaGATTCTGTATCCTAGGCTGAGACACTGTGTTAAT +
Preference number: 6 (lower is better)
Translates to: HSSWKTGSSVKL*ILYPRLRHCVN
Trigger: ATTAACACAGTGTCTCAGCCTAGGATACAGAATCCAAAGTTTCACAGAGGACCCCGTCTTCCACGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 72 bp CAGGAGTTGGTGCAGAGCAATCATGTTTGTGTAAAGTaGAAGGCAGGCCTCTATTCTTTCCTCAACAGCAAG +
Preference number: 6 (lower is better)
Translates to: QELVQSNHVCVK*KAGLYSFLNSK
Trigger: CTTGCTGTTGAGGAAAGAATAGAGGCCTGCCTTCCACTTTACACAAACATGATTGCTCTGCACCAACTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 72 bp CATACCTCTCCAGGAGTTGGTGCAGAGCAATCATGTTaGTGTAAAGTGGAAGGCAGGCCTCTATTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: HTSPGVGAEQSC*CKVEGRPLFFP
Trigger: AGGAAAGAATAGAGGCCTGCCTTCCACTTTACACAAACATGATTGCTCTGCACCAACTCCTGGAGAGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 72 bp AGCATCCCCACTTCCTGTACTCTGCTTCTCAGTAAATaGAGATCTACCCATCTGGAAACTTGGAAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SIPTSCTLLLSK*RSTHLETWKSS
Trigger: GGAAGACTTCCAAGTTTCCAGATGGGTAGATCTTCATTTACTGAGAAGCAGAGTACAGGAAGTGGGGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550712.1
CDS CAA 90 bp ACCAGGAATAGGAGTAAAACCCTCCTTTACCCGATAAGGGATACCTaGACTAGAATCAGTAGTGTCGGATTTCAGGGAAAGTGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: TRNRSKTLLYPIRDT*TRISSVGFQGKWFC
Trigger: GCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGGTATCCCTTATCGGGTAAAGGAGGGTTTTACTCCTATTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552037.1
CDS TCA 72 bp ACACATTTCCTGCACCTCGTCCTTGGTTCCTCTTTTTaGGAACAATCTGAGGTAATGGCACCAAATTTCTGG +
Preference number: 6 (lower is better)
Translates to: THFLHLVLGSSF*EQSEVMAPNFW
Trigger: CCAGAAATTTGGTGCCATTACCTCAGATTGTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGGAAATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS GCA 72 bp AAATACCCCAATGAACATTCAGAGAAAAATGGCGGTTaGACTGGTGAAGGAGCTGGAGAACTGGTTTCACTA +
Preference number: 6 (lower is better)
Translates to: KYPNEHSEKNGG*TGEGAGELVSL
Trigger: TAGTGAAACCAGTTCTCCAGCTCCTTCACCAGTGCAACCGCCATTTTTCTCTGAATGTTCATTGGGGTATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 72 bp CTATCCTGCCAATACCATCAATTTCCACATCAGAGTTaGCTGGGGATGATGAACTTGTCTTCAGCTGATCTG +
Preference number: 6 (lower is better)
Translates to: LSCQYHQFPHQS*LGMMNLSSADL
Trigger: CAGATCAGCTGAAGACAAGTTCATCATCCCCAGCAAACTCTGATGTGGAAATTGATGGTATTGGCAGGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 72 bp AGGAGTAAAACCCTCCTTTACCCGATAAGGGATACCTaGACTAGAATCAGTAGTGTCGGATTTCAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: RSKTLLYPIRDT*TRISSVGFQGK
Trigger: CTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGGTATCCCTTATCGGGTAAAGGAGGGTTTTACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552037.1
CDS TCA 72 bp TCAGAGTTTGCTGGGGATGATGAACTTGTCTTCAGCTaGTCTGATTTAATCAAACGCTGTTTCTCACGGTTG +
Preference number: 6 (lower is better)
Translates to: SEFAGDDELVFS*SDLIKRCFSRL
Trigger: CAACCGTGAGAAACAGCGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCATCATCCCCAGCAAACTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS GCA 72 bp CCTCTATTCTTTCCTCAACAGCAAGGCTCTCATCTGTaGAAGCTTTCACTGCATCTTCAAAAACTGCTAACA +
Preference number: 6 (lower is better)
Translates to: PLFFPQQQGSHL*KLSLHLQKLLT
Trigger: TGTTAGCAGTTTTTGAAGATGCAGTGAAAGCTTGCACAGATGAGAGCCTTGCTGTTGAGGAAAGAATAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS GCA 72 bp ATCCTTTTAAGTGCAGCATCCCCACTTCCTGTACTCTaGTTCTCAGTAAATGAAGATCTACCCATCTGGAAA +
Preference number: 6 (lower is better)
Translates to: ILLSAASPLPVL*FSVNEDLPIWK
Trigger: TTTCCAGATGGGTAGATCTTCATTTACTGAGAAGCAGAGTACAGGAAGTGGGGATGCTGCACTTAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550712.1
CDS GCA 72 bp GGAGTCTGGGTTTTCATTCCTGAGTCTACCTTTACTTaGTGTATAGCTCGGCAAGTCATAGGGCTAATAATA +
Preference number: 6 (lower is better)
Translates to: GVWVFIPESTFT*CIARQVIGLII
Trigger: TATTATTAGCCCTATGACTTGCCGAGCTATACAGCAAGTAAAGGTAGACTCAGGAATGAAAACCCAGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551487.1
CDS CAA 72 bp AAATTCGGGTTCCTCTTCCACAACTGGAGAGATATTTaGTTGTTCCTTTGCTTTAAGGGCACGGGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: KFGFLFHNWRDI*LFLCFKGTGFF
Trigger: AAAGAAGCCCGTGCCCTTAAAGCAAAGGAACAACAAAATATCTCTCCAGTTGTGGAAGAGGAACCCGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378743.9
ENST00000546606.1
ENST00000552994.5
CDS CAA 72 bp GATCTACCCATCTGGAAACTTGGAAGTCTTCCTCCCTaGACTTCTCACCATTACCCCTTGATTAGATTATTA +
Preference number: 6 (lower is better)
Translates to: DLPIWKLGSLPP*TSHHYPLIRLL
Trigger: TAATAATCTAATCAAGGGGTAATGGTGAGAAGTCAAGGGAGGAAGACTTCCAAGTTTCCAGATGGGTAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550712.1
CDS CAA 90 bp CCAGGTGGCCAGGCATGTTGGGATATTATATGTAAACATCTTGGCTaGAAGTTTCAGAATCTGAACATTGCTTTCTTCCCATTCATGTTG +
Preference number: 6 (lower is better)
Translates to: PGGQACWDIICKHLG*KFQNLNIAFFPFML
Trigger: CAACATGAATGGGAAGAAAGCAATGTTCAGATTCTGAAACTTCAAGCCAAGATGTTTACATATAATATCCCAACATGCCTGGCCACCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378743.9
ENST00000551487.1
ENST00000552994.5
CDS CAA 72 bp AGGTCAGGATCTGAAGATTTACTTCTTGATCTCCTCTaGCCACCAACCAATTTCATGAATCGATTGTACTGT +
Preference number: 6 (lower is better)
Translates to: RSGSEDLLLDLL*PPTNFMNRLYC
Trigger: ACAGTACAATCGATTCATGAAATTGGTTGGTGGCAAGAGGAGATCAAGAAGTAAATCTTCAGATCCTGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 72 bp TTGATTCAAGTACTTGTACGCAAGCTTGAGCCAAAGTaGTACATGAGAAGGATTTTCAAGCACACTTGCTTC +
Preference number: 6 (lower is better)
Translates to: LIQVLVRKLEPK*YMRRIFKHTCF
Trigger: GAAGCAAGTGTGCTTGAAAATCCTTCTCATGTACAACTTTGGCTCAAGCTTGCGTACAAGTACTTGAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 72 bp TACTTCTTGATCTCCTCTTGCCACCAACCAATTTCATaGATCGATTGTACTGTTCTTCCTGATTTGAGAGAT +
Preference number: 6 (lower is better)
Translates to: YFLISSCHQPIS*IDCTVLPDLRD
Trigger: ATCTCTCAAATCAGGAAGAACAGTACAATCGATTCATGAAATTGGTTGGTGGCAAGAGGAGATCAAGAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 72 bp GATATTGCTAACAAGGAGAACAGCCATCTGGTCCATTaGCATTCGATCTTTGTTTACTCCAAAAAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: DIANKENSHLVH*HSIFVYSKKFL
Trigger: GAGAAACTTTTTGGAGTAAACAAAGATCGAATGTCAATGGACCAGATGGCTGTTCTCCTTGTTAGCAATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 72 bp ACTGCTAACAACATGTCAGGATTAGTCTTTACATCTTaGACAGCTTGCCATGGCATTACAAATGATTCAGTG +
Preference number: 6 (lower is better)
Translates to: TANNMSGLVFTS*TACHGITNDSV
Trigger: CACTGAATCATTTGTAATGCCATGGCAAGCTGTTCAAGATGTAAAGACTAATCCTGACATGTTGTTAGCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 72 bp TGGACTCTAATCCACCAAAAACACTATTTGTTGACTTaGAAGCCTCTCCATCAGATTCACTATCATCTGAAT +
Preference number: 6 (lower is better)
Translates to: WTLIHQKHYLLT*KPLHQIHYHLN
Trigger: ATTCAGATGATAGTGAATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTGTTTTTGGTGGATTAGAGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 72 bp ATGGACTCTAATCCACCAAAAACACTATTTGTTGACTaGGAAGCCTCTCCATCAGATTCACTATCATCTGAA +
Preference number: 6 (lower is better)
Translates to: MDSNPPKTLFVD*EASPSDSLSSE
Trigger: TTCAGATGATAGTGAATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTGTTTTTGGTGGATTAGAGTCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS GCA 72 bp AATGTTGAATTCAATAAGATGTATGTAGGCCAACCATaGCAAACATCGATCACTGGTTTTAAGGTATTCAGC +
Preference number: 6 (lower is better)
Translates to: NVEFNKMYVGQP*QTSITGFKVFS
Trigger: GCTGAATACCTTAAAACCAGTGATCGATGTTTGGCATGGTTGGCCTACATACATCTTATTGAATTCAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CCA 72 bp CTTTCATTGATATTGCTAACAAGGAGAACAGCCATCTaGTCCATTGACATTCGATCTTTGTTTACTCCAAAA +
Preference number: 6 (lower is better)
Translates to: LSLILLTRRTAI*SIDIRSLFTPK
Trigger: TTTTGGAGTAAACAAAGATCGAATGTCAATGGACCAGATGGCTGTTCTCCTTGTTAGCAATATCAATGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 90 bp GAGGAAGAAGAGTCATTACTAACTGAAATATTTAATTCCATTACCTaGACTAGAATCAGTAGTGTCGGATTTCAGGGAAAGTGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: EEEESLLTEIFNSIT*TRISSVGFQGKWFC
Trigger: GCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGGTAATGGAATTAAATATTTCAGTTAGTAATGACTCTTCTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548100.1
CDS CAA 90 bp TCTTTAATCATGGACTCTAATCCACCAAAAACACTATTTGTTGACTaGGAAGCCTCTCCATCAGATTCACTATCATCTGAATCATTTAGT +
Preference number: 6 (lower is better)
Translates to: SLIMDSNPPKTLFVD*EASPSDSLSSESFS
Trigger: ACTAAATGATTCAGATGATAGTGAATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTGTTTTTGGTGGATTAGAGTCCATGATTAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 72 bp ACTGTTCTTCCTGATTTGAGAGATCTCGAATTTTTCTaGTTTCTTCCTCTCTTTTCCTTCTCTCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: TVLPDLRDLEFF*FLPLFSFSLLL
Trigger: AAGAAGAAGAGAGAAGGAAAAGAGAGGAAGAAATCAGAAAAATTCGAGATCTCTCAAATCAGGAAGAACAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS TCA 72 bp TTACATGTTCCTGTTAAATCAAAACGGCAGAAACACTaGTCCGGTTCAATCATATTACTGTATGATACTGAG +
Preference number: 6 (lower is better)
Translates to: LHVPVKSKRQKH*SGSIILLYDTE
Trigger: CTCAGTATCATACAGTAATATGATTGAACCGGATCAGTGTTTCTGCCGTTTTGATTTAACAGGAACATGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 72 bp GATGTCTCACCAGTAAATCAGCCACAAATAAGGAACTaGGTGGTTAAACATATCATCATCAAAATTCCCTTT +
Preference number: 6 (lower is better)
Translates to: DVSPVNQPQIRN*VVKHIIIKIPF
Trigger: AAAGGGAATTTTGATGATGATATGTTTAACCACCAAGTTCCTTATTTGTGGCTGATTTACTGGTGAGACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546771.1
CDS TCA 72 bp CAATTTCATGAATCGATTGTACTGTTCTTCCTGATTTaGGAGATCTCGAATTTTTCTGATTTCTTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: QFHESIVLFFLI*EISNFSDFFLS
Trigger: AGAGAGGAAGAAATCAGAAAAATTCGAGATCTCTCAAATCAGGAAGAACAGTACAATCGATTCATGAAATTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378743.9
ENST00000552994.5
CDS CAA 72 bp CAAAATTCCCTTTACATAAACGAGATGGAATGTCAATaGGTCCTGGAATATTTAAGAGATACCGAAACAGAT +
Preference number: 6 (lower is better)
Translates to: QNSLYINEMECQ*VLEYLRDTETD
Trigger: ATCTGTTTCGGTATCTCTTAAATATTCCAGGACCAATTGACATTCCATCTCGTTTATGTAAAGGGAATTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378743.9
ENST00000546771.1
ENST00000552994.5
CDS CAA 72 bp GAGTCATTACTAACTGAAATATTTAATTCCATTACCTaGACTAGAATCAGTAGTGTCGGATTTCAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: ESLLTEIFNSIT*TRISSVGFQGK
Trigger: CTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGGTAATGGAATTAAATATTTCAGTTAGTAATGACTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548100.1