Pregenerated sensors for ZFAND6 (Homo sapiens)
Ensembl gene IDs: ENSG00000086666Ensembl transcript IDs: ENST00000261749.11, ENST00000557983.1, ENST00000558272.5, ENST00000558494.5, ENST00000558688.5, ENST00000558997.5, ENST00000559157.5, ENST00000559775.5, ENST00000560228.5, ENST00000560392.5, ENST00000560470.5, ENST00000561012.5, ENST00000561060.5, ENST00000564367.5, ENST00000613266.4, ENST00000616533.4, ENST00000618205.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCAATATTAACTCTCAAGGGAACAGGAACAATCTTAATTGAAGTCAACAACAGTATTCAGACAGACTACTaGCAGAGGTTGCAGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PILTLKGTGTILIEVNNSIQTDY*QRLQVG Trigger: GCCCACCTGCAACCTCTGTCAGTAGTCTGTCTGAAT...ACTGTTGTTGACTTCAATTAAGATTGTTCCTGTTCCCTTGAGAGTTAATATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558688.5 |
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| CDS-3UTR CCA 90 bp | CCAATATTAACTCTCAAGGGAACAGGAACAATCTTAATTGAAGTCAACAACAGTGAGTCTAATGCTGACTaGGCTTCTGGCACACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PILTLKGTGTILIEVNNSESNAD*ASGTLP Trigger: TGGCAGTGTGCCAGAAGCCCAGTCAGCATTAGACTC...ACTGTTGTTGACTTCAATTAAGATTGTTCCTGTTCCCTTGAGAGTTAATATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558688.5 |
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| CDS-3UTR GCA 90 bp | TCAGAAGGTGAAGTATATCCAATATTAACTCTCAAGGGAACAGGAACAATCTTAACTACTGACAGAGGTTaGAGGTGGGCTTATTCTACC | + |
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Preference number: 4 (lower is better) Translates to: SEGEVYPILTLKGTGTILTTDRG*RWAYST Trigger: GGTAGAATAAGCCCACCTGCAACCTCTGTCAGTAGT...TAAGATTGTTCCTGTTCCCTTGAGAGTTAATATTGGATATACTTCACCTTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558688.5 |
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| CDS-3UTR CCA 90 bp | TCAGAAGGTGAAGTATATCCAATATTAACTCTCAAGGGAACAGGAACAATCTTAGACAGAGGTTGCAGGTaGGCTTATTCTACCATTACT | + |
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Preference number: 4 (lower is better) Translates to: SEGEVYPILTLKGTGTILDRGCR*AYSTIT Trigger: AGTAATGGTAGAATAAGCCCACCTGCAACCTCTGTC...TAAGATTGTTCCTGTTCCCTTGAGAGTTAATATTGGATATACTTCACCTTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558688.5 |
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| CDS-3UTR GCA 90 bp | TCAGAAGGTGAAGTATATCCAATATTAACTCTCAAGGGAACAGGAACAATCTTATCTGATACTGAAGCCTaGACATCTTCTGTTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SEGEVYPILTLKGTGTILSDTEA*TSSVSG Trigger: ACCTGAAACAGAAGATGTGCAGGCTTCAGTATCAGA...TAAGATTGTTCCTGTTCCCTTGAGAGTTAATATTGGATATACTTCACCTTCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558688.5 |
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| CDS CCA 90 bp | CTCCGCCTGACACGCTGCGCGCCGCCGCCGGTAGCCGCCGGTGAATaGGTACAGGTAATGCCGCCGAACCCCTGCTTGCTCCGGCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: LRLTRCAPPPVAAGE*VQVMPPNPCLLRLR Trigger: GCGGAGCCGGAGCAAGCAGGGGTTCGGCGGCATTACCTGTACCCATTCACCGGCGGCTACCGGCGGCGGCGCGCAGCGTGTCAGGCGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000261749.11 ENST00000559157.5 ENST00000561012.5 ENST00000561060.5 ENST00000564367.5 ENST00000613266.4 |
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| CDS TCA 90 bp | GTCTCTCCGCCTGACACGCTGCGCGCCGCCGCCGGTAGCCGCCGGTaGATGGGTACAGGTAATGCCGCCGAACCCCTGCTTGCTCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: VSPPDTLRAAAGSRR*MGTGNAAEPLLAPA Trigger: AGCCGGAGCAAGCAGGGGTTCGGCGGCATTACCTGTACCCATTCACCGGCGGCTACCGGCGGCGGCGCGCAGCGTGTCAGGCGGAGAGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000261749.11 ENST00000559157.5 ENST00000561012.5 ENST00000561060.5 ENST00000564367.5 ENST00000613266.4 |
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| CDS GCA 90 bp | TTCCTCAGTTGCACACCTGGCGGCGGGTCTCTCCGCCTGACACGCTaGGCGCCGCCGCCGGTAGCCGCCGGTGAATGGGTACAGGTAATG | + |
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Preference number: 5 (lower is better) Translates to: FLSCTPGGGSLRLTR*APPPVAAGEWVQVM Trigger: CATTACCTGTACCCATTCACCGGCGGCTACCGGCGGCGGCGCGCAGCGTGTCAGGCGGAGAGACCCGCCGCCAGGTGTGCAACTGAGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000558494.5 ENST00000561060.5 ENST00000564367.5 |
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| CDS GCA 90 bp | GACTTCAGATTCATTCCTGGCGGCGGGTCTCTCCGCCTGACACGCTaGGCGCCGCCGCCGGTAGCCGCCGGTGAATGGGTACAGGTAATG | + |
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Preference number: 5 (lower is better) Translates to: DFRFIPGGGSLRLTR*APPPVAAGEWVQVM Trigger: CATTACCTGTACCCATTCACCGGCGGCTACCGGCGGCGGCGCGCAGCGTGTCAGGCGGAGAGACCCGCCGCCAGGAATGAATCTGAAGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000261749.11 ENST00000561012.5 |
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| CDS GCA 90 bp | TTCAACACCAAAGTATCTGGCGGCGGGTCTCTCCGCCTGACACGCTaGGCGCCGCCGCCGGTAGCCGCCGGTGAATGGGTACAGGTAATG | + |
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Preference number: 5 (lower is better) Translates to: FNTKVSGGGSLRLTR*APPPVAAGEWVQVM Trigger: CATTACCTGTACCCATTCACCGGCGGCTACCGGCGGCGGCGCGCAGCGTGTCAGGCGGAGAGACCCGCCGCCAGATACTTTGGTGTTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613266.4 |
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| CDS CCA 90 bp | TTAAAGCCTTCTGTGTTTTACTGCAGCAGACTTCAGATTCATTCCTaGCGGCGGGTCTCTCCGCCTGACACGCTGCGCGCCGCCGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: LKPSVFYCSRLQIHS*RRVSPPDTLRAAAG Trigger: ACCGGCGGCGGCGCGCAGCGTGTCAGGCGGAGAGACCCGCCGCCAGGAATGAATCTGAAGTCTGCTGCAGTAAAACACAGAAGGCTTTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261749.11 ENST00000561012.5 |
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| CDS TCA 90 bp | TCCGTCCGCTGTTTATTAAACTTTTCTGTTTGGTTGTTCGGCCTATaGCGCGACCGCGGAGGAGAGCCACTGGATTGGCCGGCTCCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SVRCLLNFSVWLFGL*RDRGGEPLDWPAPA Trigger: CGCGGGAGCCGGCCAATCCAGTGGCTCTCCTCCGCGGTCGCGTCATAGGCCGAACAACCAAACAGAAAAGTTTAATAAACAGCGGACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613266.4 |
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| CDS CCA 90 bp | TTTAAATTTCTCTCTTCTATCCCAAATGTTCAACACCAAAGTATCTaGCGGCGGGTCTCTCCGCCTGACACGCTGCGCGCCGCCGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: FKFLSSIPNVQHQSI*RRVSPPDTLRAAAG Trigger: ACCGGCGGCGGCGCGCAGCGTGTCAGGCGGAGAGACCCGCCGCCAGATACTTTGGTGTTGAACATTTGGGATAGAAGAGAGAAATTTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613266.4 |
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| CDS GCA 90 bp | ACTGGGCACCTCATGAGTTCCCTCTACAATCCATGCTTCACACATTaGATCCAATCATCTGCCTTAAGTGAAAATCTAATGGTGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: TGHLMSSLYNPCFTH*IQSSALSENLMVFP Trigger: AGGGAACACCATTAGATTTTCACTTAAGGCAGATGATTGGATGCAATGTGTGAAGCATGGATTGTAGAGGGAACTCATGAGGTGCCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CCA 90 bp | CCAACTAGACTTTCCCCAGGGATCCACTGCTCCATTAATCTACACTaGGAATATGCCATGTACCTTTGCTCACACTTCTTAGAATCTATT | + |
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Preference number: 5 (lower is better) Translates to: PTRLSPGIHCSINLH*EYAMYLCSHFLESI Trigger: AATAGATTCTAAGAAGTGTGAGCAAAGGTACATGGCATATTCCCAGTGTAGATTAATGGAGCAGTGGATCCCTGGGGAAAGTCTAGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS GCA 90 bp | CCTTTTCCAAATACTGGGCACCTCATGAGTTCCCTCTACAATCCATaGTTCACACATTGCATCCAATCATCTGCCTTAAGTGAAAATCTA | + |
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Preference number: 5 (lower is better) Translates to: PFPNTGHLMSSLYNP*FTHCIQSSALSENL Trigger: TAGATTTTCACTTAAGGCAGATGATTGGATGCAATGTGTGAAGCATGGATTGTAGAGGGAACTCATGAGGTGCCCAGTATTTGGAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS-3UTR CAA 90 bp | CCAATATTAACTCTCAAGGGAACAGGAACAATCTTAATTGAAGTCAACAACAGTAGCCATGTTCCTCAGTaGCACACCAACAAAACCTCC | + |
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Preference number: 5 (lower is better) Translates to: PILTLKGTGTILIEVNNSSHVPQ*HTNKTS Trigger: GGAGGTTTTGTTGGTGTGCAACTGAGGAACATGGCT...ACTGTTGTTGACTTCAATTAAGATTGTTCCTGTTCCCTTGAGAGTTAATATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558688.5 |
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| CDS GCA 90 bp | ATACTACTTGAATATTCTAAGGGAGTGTGCAAGACAATAGCCATATaGATAGTTCTTAATATTGTTCGGGGTCAGAATGACATAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: ILLEYSKGVCKTIAI*IVLNIVRGQNDIGL Trigger: GAGACCTATGTCATTCTGACCCCGAACAATATTAAGAACTATGCATATGGCTATTGTCTTGCACACTCCCTTAGAATATTCAAGTAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CCA 72 bp | TGTTCGGCCTATGACGCGACCGCGGAGGAGAGCCACTaGATTGGCCGGCTCCCGCGGCTGACGCGCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CSAYDATAEESH*IGRLPRLTRGP Trigger: GGGCCCGCGCGTCAGCCGCGGGAGCCGGCCAATCCAGTGGCTCTCCTCCGCGGTCGCGTCATAGGCCGAACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613266.4 |
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| CDS TCA 72 bp | CCTGACACGCTGCGCGCCGCCGCCGGTAGCCGCCGGTaGATGGGTACAGGTAATGCCGCCGAACCCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PDTLRAAAGSRR*MGTGNAAEPLL Trigger: AAGCAGGGGTTCGGCGGCATTACCTGTACCCATTCACCGGCGGCTACCGGCGGCGGCGCGCAGCGTGTCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000261749.11 ENST00000558494.5 ENST00000559157.5 ENST00000561012.5 ENST00000561060.5 ENST00000564367.5 ENST00000613266.4 |
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| CDS CCA 72 bp | ACACGCTGCGCGCCGCCGCCGGTAGCCGCCGGTGAATaGGTACAGGTAATGCCGCCGAACCCCTGCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TRCAPPPVAAGE*VQVMPPNPCLL Trigger: GAGCAAGCAGGGGTTCGGCGGCATTACCTGTACCCATTCACCGGCGGCTACCGGCGGCGGCGCGCAGCGTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000261749.11 ENST00000558494.5 ENST00000559157.5 ENST00000561012.5 ENST00000561060.5 ENST00000564367.5 ENST00000613266.4 |
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| CDS CAA 90 bp | CGCCACCGCCGGCCCCTCCGTCCGCTGTTTATTAAACTTTTCTGTTaGGTTGTTCGGCCTATGACGCGACCGCGGAGGAGAGCCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: RHRRPLRPLFIKLFC*VVRPMTRPRRRATG Trigger: TCCAGTGGCTCTCCTCCGCGGTCGCGTCATAGGCCGAACAACCAAACAGAAAAGTTTAATAAACAGCGGACGGAGGGGCCGGCGGTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561060.5 ENST00000613266.4 |
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| CDS CCA 72 bp | TCTGTGTTTTACTGCAGCAGACTTCAGATTCATTCCTaGCGGCGGGTCTCTCCGCCTGACACGCTGCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SVFYCSRLQIHS*RRVSPPDTLRA Trigger: GGCGCGCAGCGTGTCAGGCGGAGAGACCCGCCGCCAGGAATGAATCTGAAGTCTGCTGCAGTAAAACACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000261749.11 ENST00000561012.5 |
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| CDS CCA 72 bp | CTCTCTTCTATCCCAAATGTTCAACACCAAAGTATCTaGCGGCGGGTCTCTCCGCCTGACACGCTGCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LSSIPNVQHQSI*RRVSPPDTLRA Trigger: GGCGCGCAGCGTGTCAGGCGGAGAGACCCGCCGCCAGATACTTTGGTGTTGAACATTTGGGATAGAAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000613266.4 |
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| CDS CAA 72 bp | CGGCCCCTCCGTCCGCTGTTTATTAAACTTTTCTGTTaGGTTGTTCGGCCTATGACGCGACCGCGGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RPLRPLFIKLFC*VVRPMTRPRRR Trigger: TCTCCTCCGCGGTCGCGTCATAGGCCGAACAACCAAACAGAAAAGTTTAATAAACAGCGGACGGAGGGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000561060.5 ENST00000613266.4 |
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| CDS TCA 72 bp | TGTTTATTAAACTTTTCTGTTTGGTTGTTCGGCCTATaGCGCGACCGCGGAGGAGAGCCACTGGATTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: CLLNFSVWLFGL*RDRGGEPLDWP Trigger: CGGCCAATCCAGTGGCTCTCCTCCGCGGTCGCGTCATAGGCCGAACAACCAAACAGAAAAGTTTAATAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613266.4 |
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| CDS CAA 72 bp | ATAATCAGCTCTTCCTCCACTGCCTCTCCAACAACCTaGGGGTGGGAAACCCTGTGTATAGCACTTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: IISSSSTASPTT*GWETLCIALFI Trigger: TATGAAAAGTGCTATACACAGGGTTTCCCACCCCAAGGTTGTTGGAGAGGCAGTGGAGGAAGAGCTGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CAA 90 bp | CACTATTCCTCAACAGTACTCCATGATTCAGCCATACTGAAGGACTaGCAGTTTCCCTGGACATATCAAACTCTCTTTTGCCTCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HYSSTVLHDSAILKD*QFPWTYQTLFCLWA Trigger: AGCCCAGAGGCAAAAGAGAGTTTGATATGTCCAGGGAAACTGCAAGTCCTTCAGTATGGCTGAATCATGGAGTACTGTTGAGGAATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CCA 72 bp | AGCTCTTCCTCCACTGCCTCTCCAACAACCTTGGGGTaGGAAACCCTGTGTATAGCACTTTTCATATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSSSTASPTTLG*ETLCIALFILK Trigger: TTTTAATATGAAAAGTGCTATACACAGGGTTTCCCACCCCAAGGTTGTTGGAGAGGCAGTGGAGGAAGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CAA 90 bp | TTGCACACACAGTTGAGGTTGATGAGCAAACAGCTGTCCTGTATCTaGAGACAGACATTAGCTTTCTGCCTTCCCTATTCTCATAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LHTQLRLMSKQLSCI*RQTLAFCLPYSHKQ Trigger: CTGCTTATGAGAATAGGGAAGGCAGAAAGCTAATGTCTGTCTCAAGATACAGGACAGCTGTTTGCTCATCAACCTCAACTGTGTGTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000261749.11 ENST00000558272.5 ENST00000558997.5 ENST00000559775.5 ENST00000560392.5 ENST00000560470.5 ENST00000616533.4 ENST00000618205.4 |
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| CDS GCA 72 bp | AATACTGGGCACCTCATGAGTTCCCTCTACAATCCATaGTTCACACATTGCATCCAATCATCTGCCTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: NTGHLMSSLYNP*FTHCIQSSALS Trigger: ACTTAAGGCAGATGATTGGATGCAATGTGTGAAGCATGGATTGTAGAGGGAACTCATGAGGTGCCCAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CAA 90 bp | TGTGAAACACAGTTGAGGTTGATGAGCAAACAGCTGTCCTGTATCTaGAGACAGACATTAGCTTTCTGCCTTCCCTATTCTCATAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CETQLRLMSKQLSCI*RQTLAFCLPYSHKQ Trigger: CTGCTTATGAGAATAGGGAAGGCAGAAAGCTAATGTCTGTCTCAAGATACAGGACAGCTGTTTGCTCATCAACCTCAACTGTGTTTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560228.5 ENST00000561012.5 |
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| CDS TCA 72 bp | TTAGTGTTTCCTGTTGCATACAGTAATTCCGAGTTCTaGGCCTTTGGATCTCCAACAAGAGGCCACTGTATT | + |
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Preference number: 6 (lower is better) Translates to: LVFPVAYSNSEF*AFGSPTRGHCI Trigger: AATACAGTGGCCTCTTGTTGGAGATCCAAAGGCTCAGAACTCGGAATTACTGTATGCAACAGGAAACACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561012.5 |
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| CDS GCA 72 bp | CCATGTTCCTCAGTTGCACACCTAACTTGGCATAGGTaGTTGAGATTAGTGTTTCCTGTTGCATACAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: PCSSVAHLTWHR*LRLVFPVAYSN Trigger: ATTACTGTATGCAACAGGAAACACTAATCTCAAGCACCTATGCCAAGTTAGGTGTGCAACTGAGGAACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561012.5 |
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| CDS CAA 72 bp | TCAACAGTACTCCATGATTCAGCCATACTGAAGGACTaGCAGTTTCCCTGGACATATCAAACTCTCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: STVLHDSAILKD*QFPWTYQTLFC Trigger: GCAAAAGAGAGTTTGATATGTCCAGGGAAACTGCAAGTCCTTCAGTATGGCTGAATCATGGAGTACTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CAA 72 bp | TGTTCCTCAGTTGCACACCTAACTTGGCATAGGTGCTaGAGATTAGTGTTTCCTGTTGCATACAGTAATTCC | + |
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Preference number: 6 (lower is better) Translates to: CSSVAHLTWHRC*RLVFPVAYSNS Trigger: GGAATTACTGTATGCAACAGGAAACACTAATCTCAAGCACCTATGCCAAGTTAGGTGTGCAACTGAGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561012.5 |
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| CDS CAA 90 bp | CAACCTCAGATTGAAAATACAGTATTCCCAGGATGTGAAACACAGTaGAGGTTGATGAGCAAACAGCTGTCCTGTATCTTGAGACAGACA | + |
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Preference number: 6 (lower is better) Translates to: QPQIENTVFPGCETQ*RLMSKQLSCILRQT Trigger: TGTCTGTCTCAAGATACAGGACAGCTGTTTGCTCATCAACCTCAACTGTGTTTCACATCCTGGGAATACTGTATTTTCAATCTGAGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560228.5 ENST00000561012.5 |
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| CDS CAA 90 bp | CAGATTGAAAATACAGTATTCCCAGGATGTGAAACACAGTTGAGGTaGATGAGCAAACAGCTGTCCTGTATCTTGAGACAGACATTAGCT | + |
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Preference number: 6 (lower is better) Translates to: QIENTVFPGCETQLR*MSKQLSCILRQTLA Trigger: AGCTAATGTCTGTCTCAAGATACAGGACAGCTGTTTGCTCATCAACCTCAACTGTGTTTCACATCCTGGGAATACTGTATTTTCAATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560228.5 ENST00000561012.5 |
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| CDS GCA 72 bp | TATAAGTTGTGCTTTCCATACAAAATACTCTTTCTATaGCCCTCCTGTCCCTCTTTTTATCAGGCTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: YKLCFPYKILFL*PSCPSFYQANS Trigger: AGAGTTAGCCTGATAAAAAGAGGGACAGGAGGGGCATAGAAAGAGTATTTTGTATGGAAAGCACAACTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS GCA 72 bp | GAATATTCTAAGGGAGTGTGCAAGACAATAGCCATATaGATAGTTCTTAATATTGTTCGGGGTCAGAATGAC | + |
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Preference number: 6 (lower is better) Translates to: EYSKGVCKTIAI*IVLNIVRGQND Trigger: GTCATTCTGACCCCGAACAATATTAAGAACTATGCATATGGCTATTGTCTTGCACACTCCCTTAGAATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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| CDS CAA 72 bp | CCTGGACATATCAAACTCTCTTTTGCCTCTGGGCTCTaGTATAAGTTGTGCTTTCCATACAAAATACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PGHIKLSFASGL*YKLCFPYKILF Trigger: AAAGAGTATTTTGTATGGAAAGCACAACTTATACAAGAGCCCAGAGGCAAAAGAGAGTTTGATATGTCCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557983.1 |
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