RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFAND5 (Homo sapiens)

Ensembl gene IDs: ENSG00000107372

Ensembl transcript IDs: ENST00000237937.7, ENST00000343431.6, ENST00000376956.3, ENST00000376960.8, ENST00000376962.10, ENST00000487330.1, ENST00000488164.5

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTaGTACTACTCAGACCTTCAGAGTGATGGAGTCCGAGGGCTCATC +
Preference number: 1 (lower is better)
Translates to: ITPLHCSLAKQKSIS*YYSDLQSDGVRGLI
Trigger: GATGAGCCCTCGGACTCCATCACTCTGAAGGTCTGAGTAGTAGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR GCA 90 bp ACACTAGAGTCCTACACCCAAGTACAATATGATAAAGCAGCCCTCTaGAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGT +
Preference number: 1 (lower is better)
Translates to: TLESYTQVQYDKAAL*KWCWIPLRSLLQPC
Trigger: ACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGACTCTAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CCA 90 bp GAGTCCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTA +
Preference number: 1 (lower is better)
Translates to: ESYTQVQYDKAALCK*CWIPLRSLLQPCWL
Trigger: TAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR TCA 90 bp GGCCAAACAAAAATCTATCTCTTGCTACTACTCAGACCTTCAGAGTaGTGGAGTCCGAGGGCTCATCTTACCTTCTCTATACCACTCTTA +
Preference number: 1 (lower is better)
Translates to: GQTKIYLLLLLRPSE*WSPRAHLTFSIPLL
Trigger: TAAGAGTGGTATAGAGAAGGTAAGATGAGCCCTCGGACTCCATCACTCTGAAGGTCTGAGTAGTAGCAAGAGATAGATTTTTGTTTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR GCA 90 bp CTTCATTTAAGAGATGAAGCAGTCCAAAGTGGACCTAAAATAACTTaGCCAAAATCACGGGCTGGTTCCAGGGTCCCTCATCTTAATCAC +
Preference number: 1 (lower is better)
Translates to: LHLRDEAVQSGPKIT*PKSRAGSRVPHLNH
Trigger: GTGATTAAGATGAGGGACCCTGGAACCAGCCCGTGATTTTGGGCAAGTTATTTTAGGTCCACTTTGGACTGCTTCATCTCTTAAATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR GCA 90 bp TCTGTACATTTCAAAGGACTTCATGGCCTTGCATTCAGGTTTGAATaGAAGAATTTGGGTAGAACTGAGTCCTCTCAGGTGCCTTACACA +
Preference number: 1 (lower is better)
Translates to: SVHFKGLHGLAFRFE*KNLGRTESSQVPYT
Trigger: TGTGTAAGGCACCTGAGAGGACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTCCTTTGAAATGTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR GCA 90 bp AGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTaGTGTCTTCATTTAAGAGATGAAGCAGTCCAAAGTGGACCTAAA +
Preference number: 1 (lower is better)
Translates to: RHSFKCCHLHTPEGG*CLHLRDEAVQSGPK
Trigger: TTTAGGTCCACTTTGGACTGCTTCATCTCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR TCA 90 bp TGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATaGTTTTCCATGCAGAAGGGTACAGTTACATTAAGAACTGAAGTC +
Preference number: 1 (lower is better)
Translates to: WCWIPLRSLLQPCWL*FSMQKGTVTLRTEV
Trigger: GACTTCAGTTCTTAATGTAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CCA 90 bp TCTTATTTGACAGCTTTAGATGACCAATTTAACCAGGCTTATATATaGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCCTCTT +
Preference number: 1 (lower is better)
Translates to: SYLTALDDQFNQAYI*RQILVSRERRSDPL
Trigger: AAGAGGATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATTGGTCATCTAAAGCTGTCAAATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR GCA 90 bp ACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATaGTGCAAACATGCAGAGATTTCATTTATTTTGTTTGGCACATGG +
Preference number: 1 (lower is better)
Translates to: TSQRLYLDYIPKRQI*CKHAEISFILFGTW
Trigger: CCATGTGCCAAACAAAATAAATGAAATCTCTGCATGTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR TCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTCTCAGACCTTCAGAGTaGTGGAGTCCGAGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: SELRPCHFTPAWATEPLSLRPSE*WSPRAH
Trigger: ATGAGCCCTCGGACTCCATCACTCTGAAGGTCTGAG...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTGACCAAGTCCATGGGTaGATCTCTGTATTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: SELRPCHFTPAWATEPLSDQVHG*ISVLEP
Trigger: TGGCTCTAATACAGAGATTCACCCATGGACTTGGTC...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTTGTGTGCCTTTGAAATaGAGGATATGGGACAGCTTG +
Preference number: 2 (lower is better)
Translates to: SELRPCHFTPAWATEPLSCVPLK*RIWDSL
Trigger: CAAGCTGTCCCATATCCTCCATTTCAAAGGCACACA...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAGA +
Preference number: 2 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCAALCK*CWIPLR
Trigger: TCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGC...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTGCCCTCTGCAAGTGGTaGTGGATACCACTAAGAAGT +
Preference number: 2 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCALCKW*WIPLRS
Trigger: ACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGC...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTTACTGCGAATTCATGTaGTCACAGCCTAACAAAACT +
Preference number: 2 (lower is better)
Translates to: SELRPCHFTPAWATEPLSYCEFM*SQPNKT
Trigger: AGTTTTGTTAGGCTGTGACCACATGAATTCGCAGTA...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTATTTTGTTTGGCACATaGGAACTACATTTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: SELRPCHFTPAWATEPLSILFGT*ELHFVP
Trigger: AGGAACAAAATGTAGTTCCCATGTGCCAAACAAAAT...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTTATGGCGCCAAATACTaGTTTCACGGGAAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCYGAKY*FHGKEG
Trigger: ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATA...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGAATTAGCTGGGCGTGGTaGCTGGTGCCTGTGATCCCA +
Preference number: 2 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRISWAW*LVPVIP
Trigger: TGGGATCACAGGCACCAGCCACCACGCCCAGCTAAT...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTGGCTTAAAAACCCAATaGACAAGTGAAGTTTCCCTC +
Preference number: 2 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCGLKTQ*TSEVSL
Trigger: GAGGGAAACTTCACTTGTTCATTGGGTTTTTAAGCC...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGATGGTAGAAGTAGACTaGCAGTCCTTTTCTGGTGTA +
Preference number: 2 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQMVEVD*QSFSGV
Trigger: TACACCAGAAAAGGACTGGCAGTCTACTTCTACCAT...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR GCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCGCCCTCTGCAAGTGGTaGTGGATACCACTAAGAAGT +
Preference number: 2 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCALCKW*WIPLRS
Trigger: ACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGC...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CAA 90 bp TTCAAAGGACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTaGGGTAGAACTGAGTCCTCTCAGGTGCCTTACACACTGATTCCC +
Preference number: 2 (lower is better)
Translates to: FKGLHGLAFRFECKN*GRTESSQVPYTLIP
Trigger: GGGAATCAGTGTGTAAGGCACCTGAGAGGACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTCCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCAGCATGCAAAGAACTaGCAGATAAAACTAGGGTAT +
Preference number: 2 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCQHAKN*QIKLGY
Trigger: ATACCCTAGTTTTATCTGTCAGTTCTTTGCATGCTG...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGAAGGTGCCTTACACACTaGTTCCCTTTCTCCCCAGTC +
Preference number: 2 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRRCLTH*FPFSPV
Trigger: GACTGGGGAGAAAGGGAATCAGTGTGTAAGGCACCT...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCTGTGTGTTTCACTTTaGTGTGCAGATTTTCATCCA +
Preference number: 2 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQLCVSL*CADFHP
Trigger: TGGATGAAAATCTGCACAGCAAAGTGAAACACACAG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR GCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCCCAAAAGGCAGATATaGTGCAAACATGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYPKRQI*CKHAEI
Trigger: AATCTCTGCATGTTTGCAGCATATCTGCCTTTTGGG...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR GCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACATGGTAGAAGTAGACTaGCAGTCCTTTTCTGGTGTA +
Preference number: 2 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYMVEVD*QSFSGV
Trigger: TACACCAGAAAAGGACTGGCAGTCTACTTCTACCAT...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTTATGGCGCCAAATACTaGTTTCACGGGAAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLAYGAKY*FHGKEG
Trigger: ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATA...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCAAAGATTATACCTTaGTTACATTCCCAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQPKIIP*LHSQKA
Trigger: TGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR GCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCTGTGTGTTTCACTTTaGTGTGCAGATTTTCATCCA +
Preference number: 2 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYLCVSL*CADFHP
Trigger: TGGATGAAAATCTGCACAGCAAAGTGAAACACACAG...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR GCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGAAAAGGCAGATATGCTaGAAACATGCAGAGATTTCA +
Preference number: 2 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQKRQIC*KHAEIS
Trigger: TGAAATCTCTGCATGTTTGCAGCATATCTGCCTTTT...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CAA 90 bp CTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTaGGTTATGATTTTCCATGCAGAAGGGTACAGTTACATTAAGAAC +
Preference number: 2 (lower is better)
Translates to: LQVVLDTTKKSTAAM*VMIFHAEGYSYIKN
Trigger: GTTCTTAATGTAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CAA 90 bp GGTAATCATTTACCCCAGGTAAAGTCAACATGTACCTGTCACCCCTaGTTCTTTATGATCTGGCATAAACGCTACAGAGACCAAGTCCAT +
Preference number: 2 (lower is better)
Translates to: GNHLPQVKSTCTCHP*FFMIWHKRYRDQVH
Trigger: ATGGACTTGGTCTCTGTAGCGTTTATGCCAGATCATAAAGAACAAGGGGTGACAGGTACATGTTGACTTTACCTGGGGTAAATGATTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTCAGCCATGTTGGTTATaGTTTTCCATGCAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: DFMALHSGLNARIWVELSQPCWL*FSMQKG
Trigger: ACCCTTCTGCATGGAAAATCATAACCAACATGGCTG...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGAACCCAATGAACAAGTaGAGTTTCCCTCTGTACATG +
Preference number: 2 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLNPMNK*SFPLYM
Trigger: CATGTACAGAGGGAAACTTCACTTGTTCATTGGGTT...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTAACCCCTTGTTCTTTATaGTCTGGCATAAACGCTACA +
Preference number: 2 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVTPCSL*SGINAT
Trigger: TGTAGCGTTTATGCCAGATCATAAAGAACAAGGGGT...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACAAAAGGCAGATATGCTaGAAACATGCAGAGATTTCA +
Preference number: 2 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYKRQIC*KHAEIS
Trigger: TGAAATCTCTGCATGTTTGCAGCATATCTGCCTTTT...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR GCA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGCCCAAAAGGCAGATATaGTGCAAACATGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLPKRQI*CKHAEI
Trigger: AATCTCTGCATGTTTGCAGCATATCTGCCTTTTGGG...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGATTTTGTTTGGCACATaGGAACTACATTTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQILFGT*ELHFVP
Trigger: AGGAACAAAATGTAGTTCCCATGTGCCAAACAAAAT...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCTCATCTTTTACAACATaGAGAAGCGAGGTAGGCCAT +
Preference number: 2 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCSSFTT*RSEVGH
Trigger: ATGGCCTACCTCGCTTCTCCATGTTGTAAAAGATGA...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGCAGAGAAGCAACAGTTaGACTCTGGTAATCATTTAC +
Preference number: 2 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLQRSNS*TLVIIY
Trigger: GTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTG...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR TCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGAGTCAATGGACAACCCTaGCAAATCTTTGTTCTGATC +
Preference number: 2 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRVNGQP*QIFVLI
Trigger: GATCAGAACAAAGATTTGTCAGGGTTGTCCATTGAC...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCCCAAAAGGCAGATATaGTGCAAACATGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGPKRQI*CKHAEI
Trigger: AATCTCTGCATGTTTGCAGCATATCTGCCTTTTGGG...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCTTAGGACTCCAACTATaGCTTAAAAACCCAATGAAC +
Preference number: 2 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCLGLQL*LKNPMN
Trigger: GTTCATTGGGTTTTTAAGCCATAGTTGGAGTCCTAA...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCTTGTTCTTTATGATCTaGCATAAACGCTACAGAGAC +
Preference number: 2 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCLFFMI*HKRYRD
Trigger: GTCTCTGTAGCGTTTATGCCAGATCATAAAGAACAA...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CAA 90 bp TGGAGGATATGGGACAGCTTGAGAGGCTTTGCTTCTCAGTGTGTATaGATAAATCCATGTGAATGTTATTACCAACCCCCAAAATACAAT +
Preference number: 2 (lower is better)
Translates to: WRIWDSLRGFASQCV*INPCECYYQPPKYN
Trigger: ATTGTATTTTGGGGGTTGGTAATAACATTCACATGGATTTATCAATACACACTGAGAAGCAAAGCCTCTCAAGCTGTCCCATATCCTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGATGAGCATTTCTTCCTaGTTCCAAAGAATATGTTGT +
Preference number: 2 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLMSISS*FQRICC
Trigger: ACAACATATTCTTTGGAAGCAGGAAGAAATGCTCAT...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGACCTAGTGCAGTTCTGTaGTACACATTTTTAGCAATG +
Preference number: 2 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRPSAVL*YTFLAM
Trigger: CATTGCTAAAAATGTGTAGCACAGAACTGCACTAGG...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR GCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCCTGTGTGTTTCACTTTaGTGTGCAGATTTTCATCCA +
Preference number: 2 (lower is better)
Translates to: YRHITLAKDYTLITFPKGLCVSL*CADFHP
Trigger: TGGATGAAAATCTGCACAGCAAAGTGAAACACACAG...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CAA 90 bp CAGTACAATAAGCTTCAAAGGTTATCTCAAGACCCTGTTGTTGGCTaGATGGTTTTACTTATAACCAGTTTCGATGTTTACCTTTCACAG +
Preference number: 2 (lower is better)
Translates to: QYNKLQRLSQDPVVG*MVLLITSFDVYLSQ
Trigger: CTGTGAAAGGTAAACATCGAAACTGGTTATAAGTAAAACCATCAAGCCAACAACAGGGTCTTGAGATAACCTTTGAAGCTTATTGTACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTAACATCAAAGAAAAATaGCCATGCATCTGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGNIKEK*PCICSL
Trigger: TAAAGAGCAGATGCATGGCCATTTTTCTTTGATGTT...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTATTTTGTTTGGCACATaGGAACTACATTTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGILFGT*ELHFVP
Trigger: AGGAACAAAATGTAGTTCCCATGTGCCAAACAAAAT...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR TCA 90 bp CTATGTCAGTATAGGAACTTTGACATACATATGTACCTCCCTAACTTGAAGCAACCAAAGATTATACCTTaGTTACATTCCCAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: LCQYRNFDIHMYLPNLKQPKIIP*LHSQKA
Trigger: TGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGG...TTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAAACATCAAAGAAAAATaGCCATGCATCTGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: NSDACYSIELLYVKTKRRNIKEK*PCICSL
Trigger: TAAAGAGCAGATGCATGGCCATTTTTCTTTGATGTT...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR GCA 72 bp AACCCGGGAGGCGGAACTTGCAGTGAGCTGAGACCATaGCATTTTACTCCAGCCTGGGCGACGGAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: NPGGGTCSELRP*HFTPAWATEPL
Trigger: CAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACTGCAAGTTCCGCCTCCCGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR TCA 72 bp GGAGAATGGCGTGAACCCGGGAGGCGGAACTTGCAGTaGGCTGAGACCATGCCATTTTACTCCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: GEWREPGRRNLQ*AETMPFYSSLG
Trigger: GCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACTGCAAGTTCCGCCTCCCGGGTTCACGCCATTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTAATGTATGTGTGCCTTaGAAATGGAGGATATGGGAC +
Preference number: 3 (lower is better)
Translates to: SELRPCHFTPAWATEPLSNVCVP*KWRIWD
Trigger: GTCCCATATCCTCCATTTCAAAGGCACACATACATT...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTGCCAAAGATTATACCTaGATTACATTCCCAAAAGGC +
Preference number: 3 (lower is better)
Translates to: SELRPCHFTPAWATEPLSAKDYT*ITFPKG
Trigger: GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGC...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTAATTTTCCCCACGTaGTGGGAAGCCTACCTAGGA +
Preference number: 3 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCLIFPT*WEAYLG
Trigger: TCCTAGGTAGGCTTCCCACAACGTGGGGAAAATTAG...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR GCA 72 bp AGAGATGAAGCAGTCCAAAGTGGACCTAAAATAACTTaGCCAAAATCACGGGCTGGTTCCAGGGTCCCTCAT +
Preference number: 3 (lower is better)
Translates to: RDEAVQSGPKIT*PKSRAGSRVPH
Trigger: ATGAGGGACCCTGGAACCAGCCCGTGATTTTGGGCAAGTTATTTTAGGTCCACTTTGGACTGCTTCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGAGCCAAGATTACGCCATaGCACTGCAGCCTGGCCAAA +
Preference number: 3 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRAKITP*HCSLAK
Trigger: TTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGGC...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CCA 72 bp GTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTaGATACCACTAAGAAGTCTACTGCAGCCATGTTGG +
Preference number: 3 (lower is better)
Translates to: VQYDKAALCKWC*IPLRSLLQPCW
Trigger: CCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CCA 72 bp ACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAGAAGTCTACTGCAGCCA +
Preference number: 3 (lower is better)
Translates to: TQVQYDKAALCK*CWIPLRSLLQP
Trigger: TGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CAA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTGCCAAAGATTATACCTaGATTACATTCCCAAAAGGC +
Preference number: 3 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCAKDYT*ITFPKG
Trigger: GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGC...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR GCA 72 bp TCCTACACCCAAGTACAATATGATAAAGCAGCCCTCTaGAAGTGGTGCTGGATACCACTAAGAAGTCTACTG +
Preference number: 3 (lower is better)
Translates to: SYTQVQYDKAAL*KWCWIPLRSLL
Trigger: CAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CCA 72 bp TTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTaGGTAGAACTGAGTCCTCTCAGGTGCCTTACACAC +
Preference number: 3 (lower is better)
Translates to: FMALHSGLNARI*VELSPLRCLTH
Trigger: GTGTGTAAGGCACCTGAGAGGACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCACAGAATGTCTTATTaGACAGCTTTAGATGACCAA +
Preference number: 3 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQHRMSY*TALDDQ
Trigger: TTGGTCATCTAAAGCTGTCAAATAAGACATTCTGTG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CAA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTGACCCTGTTGTTGGCTaGATGGTTTTACTTATAACC +
Preference number: 3 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLADPVVG*MVLLIT
Trigger: GGTTATAAGTAAAACCATCAAGCCAACAACAGGGTC...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTTCTACTGCAGCCATGTaGGTTATGATTTTCCATGCA +
Preference number: 3 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLASTAAM*VMIFHA
Trigger: TGCATGGAAAATCATAACCAACATGGCTGCAGTAGA...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCGACCCTGTTGTTGGCTaGATGGTTTTACTTATAACC +
Preference number: 3 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFDPVVG*MVLLIT
Trigger: GGTTATAAGTAAAACCATCAAGCCAACAACAGGGTC...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTAGACCCTGTTGTTGGCTaGATGGTTTTACTTATAACC +
Preference number: 3 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVDPVVG*MVLLIT
Trigger: GGTTATAAGTAAAACCATCAAGCCAACAACAGGGTC...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCTCTCTTGATTATCACTaGAACAAGTTCAGCGATGGC +
Preference number: 3 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCSLDYH*NKFSDG
Trigger: GCCATCGCTGAACTTGTTCAAGTGATAATCAAGAGA...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR TCA 72 bp ATCTGGCATAAACGCTACAGAGACCAAGTCCATGGGTaGATCTCTGTATTAGAGCCAAACCCAAAACAGAAA +
Preference number: 3 (lower is better)
Translates to: IWHKRYRDQVHG*ISVLEPNPKQK
Trigger: TTTCTGTTTTGGGTTTGGCTCTAATACAGAGATTCACCCATGGACTTGGTCTCTGTAGCGTTTATGCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR TCA 72 bp AAAATCTATCTCTTGCTACTACTCAGACCTTCAGAGTaGTGGAGTCCGAGGGCTCATCTTACCTTCTCTATA +
Preference number: 3 (lower is better)
Translates to: KIYLLLLLRPSE*WSPRAHLTFSI
Trigger: TATAGAGAAGGTAAGATGAGCCCTCGGACTCCATCACTCTGAAGGTCTGAGTAGTAGCAAGAGATAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR GCA 72 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTaGTGTCTTCATTTAAGAGATGAAGCAGTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: FKCCHLHTPEGG*CLHLRDEAVQS
Trigger: ACTTTGGACTGCTTCATCTCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CCA 72 bp ACCAATTTAACCAGGCTTATATATGGCGCCAAATACTaGTTTCACGGGAAAGAAGGTCTGATCCTCTTTATG +
Preference number: 3 (lower is better)
Translates to: TNLTRLIYGAKY*FHGKEGLILFM
Trigger: CATAAAGAGGATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CCA 72 bp ACAGCTTTAGATGACCAATTTAACCAGGCTTATATATaGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCT +
Preference number: 3 (lower is better)
Translates to: TALDDQFNQAYI*RQILVSRERRS
Trigger: AGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATTGGTCATCTAAAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CAA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTTCTGTGTGTTTCACTTaGCTGTGCAGATTTTCATCC +
Preference number: 3 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGSVCFT*LCRFSS
Trigger: GGATGAAAATCTGCACAGCAAAGTGAAACACACAGA...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CAA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGATCTGTGTGTTTCACTTaGCTGTGCAGATTTTCATCC +
Preference number: 3 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRSVCFT*LCRFSS
Trigger: GGATGAAAATCTGCACAGCAAAGTGAAACACACAGA...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTGTCAGTATAGGAACTTaGACATACATATGTACCTCC +
Preference number: 3 (lower is better)
Translates to: DFMALHSGLNARIWVELSVSIGT*TYICTS
Trigger: GGAGGTACATATGTATGTCAAAGTTCCTATACTGAC...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCTCTGTGTGTTTCACTTaGCTGTGCAGATTTTCATCC +
Preference number: 3 (lower is better)
Translates to: YRHITLAKDYTLITFPKGSVCFT*LCRFSS
Trigger: GGATGAAAATCTGCACAGCAAAGTGAAACACACAGA...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR-3UTR CAA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGATTTGAATGCAAGAATTaGGGTAGAACTGAGTCCTCT +
Preference number: 3 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRFECKN*GRTESS
Trigger: AGAGGACTCAGTTCTACCCAAATTCTTGCATTCAAA...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR-3UTR CAA 90 bp CTATGTCAGTATAGGAACTTTGACATACATATGTACCTCCCTAACTTGAAGCAATCTACTGCAGCCATGTaGGTTATGATTTTCCATGCA +
Preference number: 3 (lower is better)
Translates to: LCQYRNFDIHMYLPNLKQSTAAM*VMIFHA
Trigger: TGCATGGAAAATCATAACCAACATGGCTGCAGTAGA...TTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CCA 72 bp CTTCAGAATTGTCATAAAACATCATCTTTTACAACATaGAGAAGCGAGGTAGGCCATAATTGTTCAAATTTC +
Preference number: 3 (lower is better)
Translates to: LQNCHKTSSFTT*RSEVGHNCSNF
Trigger: GAAATTTGAACAATTATGGCCTACCTCGCTTCTCCATGTTGTAAAAGATGATGTTTTATGACAATTCTGAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTGGCGGGCAGCTCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SELRPCHFTPAWATEPLSGGQLT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGAGCTGCCCGCC...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTGCCACGACGACAGGATaGCGCCTCCGTCTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SELRPCHFTPAWATEPLSATTTG*RLRLCA
Trigger: AGCACAAAGACGGAGGCGTCATCCTGTCGTCGTGGC...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237937.7
CDS-3UTR GCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGGCTCTTCGCCGCTCCTaGCACCGCCGGGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQALRRS*HRRGSC
Trigger: GCAGCTTCCCCGGCGGTGGCAGGAGCGGCGAAGAGC...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCGCGAAGCCGGCACGATaGGGCCGGGCCGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFAKPAR*GRAEAS
Trigger: GGAGGCCTCGGCCCGGCCTCATCGTGCCGGCTTCGC...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCGCGAAGCCGGCACGATaGGGCCGGGCCGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCAKPAR*GRAEAS
Trigger: GGAGGCCTCGGCCCGGCCTCATCGTGCCGGCTTCGC...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS-3UTR CCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCGTCTTTGTGCTTCCTaGGCTGGCGGGCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQRLCAS*AGGRAP
Trigger: GGGAGCCCGCCCGCCAGCCCAGGAAGCACAAAGACG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237937.7
CDS-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCCGGAGCTCGGGAAGTaGGAGGAGGGAAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCPELGK*EEGSEG
Trigger: CCCCTCGCTTCCCTCCTCCCACTTCCCGAGCTCCGG...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTGCTGAGCCAGGAGAATaGCGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCAEPGE*REPGRR
Trigger: CCGCCTCCCGGGTTCACGCCATTCTCCTGGCTCAGC...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCCCACAGGCCGCAGGTTaGGCGGACGAGGAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIPQAAG*ADEEGE
Trigger: CTCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGG...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCCGGAGCTCGGGAAGTaGGAGGAGGGAAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYPELGK*EEGSEG
Trigger: CCCCTCGCTTCCCTCCTCCCACTTCCCGAGCTCCGG...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGGGCGGGCAGCTCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQGGQLT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGAGCTGCCCGCC...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCGCTCTTCGCCGCTCCTaGCACCGCCGGGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFALRRS*HRRGSC
Trigger: GCAGCTTCCCCGGCGGTGGCAGGAGCGGCGAAGAGC...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTTTTTTCTGCGTGCTGTaGAGCGAGCCAGGGACGCCG +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCFFCVL*SEPGTP
Trigger: CGGCGTCCCTGGCTCGCTCCACAGCACGCAGAAAAA...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000237937.7
CDS-3UTR TCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCGGGGTGGGCGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIGVGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCGCCCACCCC...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTTTGTGCTTCCTGGGCTaGCGGGCGGGCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGLCFLG*RAGSPP
Trigger: GGGAGGGGAGCCCGCCCGCCAGCCCAGGAAGCACAA...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237937.7
CDS-3UTR CCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCAGCAGCGTCGAGCGTaGCCGGGACACGCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGQQRRA*PGHAGA
Trigger: AGCTCCGGCGTGTCCCGGCCACGCTCGACGCTGCTG...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACGCCGTAAGGGCCCGCTaGTGGCGCTCTTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LAKDYTLITFPKGRYAANAVRAR*WRSSPL
Trigger: GAGCGGCGAAGAGCGCCATCAGCGGGCCCTTACGGC...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACGTCTTCCTTTGTTCCTaGAGCAGCGTCGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYVFLCS*SSVERG
Trigger: GCCACGCTCGACGCTGCTGCAGGAACAAAGGAAGAC...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTCTCTGCAAGTGGTGCTaGATACCACTAAGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: SELRPCHFTPAWATEPLSLCKWC*IPLRSL
Trigger: TAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAG...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCCAGCAGCGTCGAGCGTaGCCGGGACACGCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGQQRRA*PGHAGA
Trigger: AGCTCCGGCGTGTCCCGGCCACGCTCGACGCTGCTG...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTGCCACTAAGTCAGTaGCCTTGGGCAAGTCCTTAC +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCLPLSQ*PWASPY
Trigger: GTAAGGACTTGCCCAAGGTCACTGACTTAGTGGCAG...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS-3UTR CCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTATTAGCTGGGCGTGGTaGCTGGTGCCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLAISWAW*LVPVIP
Trigger: TGGGATCACAGGCACCAGCCACCACGCCCAGCTAAT...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCATGGACTGGGCTGAGTaGCAACTGGCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIMDWAE*QLALTP
Trigger: AGGTGTCAGAGCCAGTTGTCACTCAGCCCAGTCCAT...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGGGATATGGGACAGCTTaGGAGGCTTTGCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQGYGTA*EALLLS
Trigger: ACTGAGAAGCAAAGCCTCTCAAGCTGTCCCATATCC...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCCCTGGCTAACACGGTaGAACCCTCTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCPWLTR*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCGTGTTAGCCAGGG...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTGGGGTGGGCGGATCATaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGGVGGS*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCATGATCCGCCCACCCC...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGCCGTAAGGGCCCGCTaGTGGCGCTCTTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRAVRAR*WRSSPL
Trigger: GAGCGGCGAAGAGCGCCATCAGCGGGCCCTTACGGC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCACGCCTCCGTCTTTGTaGTTCCTGGGCTGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGTPPSL*FLGWRA
Trigger: CGCCCGCCAGCCCAGGAAGCACAAAGACGGAGGCGT...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237937.7
CDS-3UTR GCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGCAGGGTCCCAAATaGGAAAGCCGGGTTCGCGCG +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGLQGPK*ESRVRA
Trigger: CGCGCGAACCCGGCTTTCGCATTTGGGACCCTGCAG...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAGA +
Preference number: 4 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYAALCK*CWIPLR
Trigger: TCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGC...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCATGGACTGGGCTGAGTaGCAACTGGCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFMDWAE*QLALTP
Trigger: AGGTGTCAGAGCCAGTTGTCACTCAGCCCAGTCCAT...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCAGGTGCCTTACACACTaGTTCCCTTTCTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIRCLTH*FPFSPV
Trigger: GACTGGGGAGAAAGGGAATCAGTGTGTAAGGCACCT...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCTCCTTTTCAGGGCCCTaGAGGGTCCCAAATGCGAAA +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLISFSGP*RVPNAK
Trigger: TTTCGCATTTGGGACCCTGCAGGGCCCTGAAAAGGA...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS-3UTR CCA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTTTAGGACTCCAACTATaGCTTAAAAACCCAATGAAC +
Preference number: 4 (lower is better)
Translates to: SELRPCHFTPAWATEPLSLGLQL*LKNPMN
Trigger: GTTCATTGGGTTTTTAAGCCATAGTTGGAGTCCTAA...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTATTAGCTGGGCGTGGTaGCTGGTGCCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: DFMALHSGLNARIWVELSISWAW*LVPVIP
Trigger: TGGGATCACAGGCACCAGCCACCACGCCCAGCTAAT...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CAA 72 bp GAAACAGCTTTCCCTCACAAACTAATTTTCCCCACGTaGTGGGAAGCCTACCTAGGATCAAACCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ETAFPHKLIFPT*WEAYLGSNLRL
Trigger: GAGCCTCAGGTTTGATCCTAGGTAGGCTTCCCACAACGTGGGGAAAATTAGTTTGTGAGGGAAAGCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTTGTACCTCCCTAACTTaGAGCAAAAGTAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCCTSLT*SKSSSM
Trigger: CATGCTGCTACTTTTGCTTCAAGTTAGGGAGGTACA...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCAGGTGCCTTACACACTaGTTCCCTTTCTCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFRCLTH*FPFSPV
Trigger: GACTGGGGAGAAAGGGAATCAGTGTGTAAGGCACCT...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCCGATTCACCATGACTaGCATGGTGCATGTTCACTT +
Preference number: 4 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYPIHHD*HGACSL
Trigger: AAGTGAACATGCACCATGTCAGTCATGGTGAATCGG...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCGCCCTCTGCAAGTGGTaGTGGATACCACTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIALCKW*WIPLRS
Trigger: ACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGC...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAAGCCCGCGTAGGAGATaGACACAGCTCCGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRSPRRR*TQLRVP
Trigger: CGGGACGCGGAGCTGTGTGCATCTCCTACGCGGGCT...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATATTTTTCTGCCTaGAGGGTCCCAAATGCGAAA +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQPYFSA*RVPNAK
Trigger: TTTCGCATTTGGGACCCTGCAGGCAGAAAAATATGG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376960.8
CDS-3UTR CCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCTCTGCAAGTGGTGCTaGATACCACTAAGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQLCKWC*IPLRSL
Trigger: TAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAGA +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFAALCK*CWIPLR
Trigger: TCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGC...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGCTGAGCCAGGAGAATaGCGTGAACCCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRAEPGE*REPGRR
Trigger: CCGCCTCCCGGGTTCACGCCATTCTCCTGGCTCAGC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCGACCAAGTCCATGGGTaGATCTCTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIDQVHG*ISVLEP
Trigger: TGGCTCTAATACAGAGATTCACCCATGGACTTGGTC...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGTCTTCATTTAAGAGATaGAGCAGTCCAAAGTGGACC +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQSSFKR*SSPKWT
Trigger: GGTCCACTTTGGACTGCTTCATCTCTTAAATGAAGA...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCGGATATGGGACAGCTTaGGAGGCTTTGCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCGYGTA*EALLLS
Trigger: ACTGAGAAGCAAAGCCTCTCAAGCTGTCCCATATCC...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGATGTATGTGTGCCTTTaGAATGGAGGATATGGGACA +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQMYVCL*NGGYGT
Trigger: TGTCCCATATCCTCCATTTCAAAGGCACACATACAT...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCCCTGGCTAACACGGTaGAACCCTCTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFPWLTR*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCGTGTTAGCCAGGG...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACTGCAGGGTCCCAAATaGGAAAGCCGGGTTCGCGCG +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRLQGPK*ESRVRA
Trigger: CGCGCGAACCCGGCTTTCGCATTTGGGACCCTGCAG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTTTTCTCCCCAGTCAATaGACAACCCTGACAAATCTT +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCFLPSQ*TTLTNL
Trigger: AAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAA...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTTTTTTCTGCTGGGAATaGAGACCTGAGTTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCFFCWE*RPEFKS
Trigger: AGACTTGAACTCAGGTCTCCATTCCCAGCAGAAAAA...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS-3UTR TCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCATGGACTGGGCTGAGTaGCAACTGGCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGMDWAE*QLALTP
Trigger: AGGTGTCAGAGCCAGTTGTCACTCAGCCCAGTCCAT...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCCAGCCATGTTGGTTATaGTTTTCCATGCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIQPCWL*FSMQKG
Trigger: ACCCTTCTGCATGGAAAATCATAACCAACATGGCTG...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCTAGTGCAGTTCTGTaGTACACATTTTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQPSAVL*YTFLAM
Trigger: CATTGCTAAAAATGTGTAGCACAGAACTGCACTAGG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTGATAAAGCAGCCCTCTaGAAGTGGTGCTGGATACCA +
Preference number: 4 (lower is better)
Translates to: DFMALHSGLNARIWVELSDKAAL*KWCWIP
Trigger: TGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCAGAGAAGCAACAGTTaGACTCTGGTAATCATTTAC +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQQRSNS*TLVIIY
Trigger: GTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTG...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCGGACCTAAAATAACTTaGCCAAAATCACGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIGPKIT*PKSRAG
Trigger: ACCAGCCCGTGATTTTGGGCAAGTTATTTTAGGTCC...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGAACCAGGCTTATATATaGCGCCAAATACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQNQAYI*RQILVS
Trigger: TGAAACCAGTATTTGGCGCCATATATAAGCCTGGTT...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTGCAGCCCTCTGCAAGTaGTGCTGGATACCACTAAGA +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGAALCK*CWIPLR
Trigger: TCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGC...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCATTTTCCCCACGTTGTaGGAAGCCTACCTAGGATCA +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFIFPTL*EAYLGS
Trigger: TGATCCTAGGTAGGCTTCCCACAACGTGGGGAAAAT...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACCATTTTACTCCAGCCTaGGCGACGGAGCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LAKDYTLITFPKGRYAANHFTPA*ATEPLS
Trigger: AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATG...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCAGCCATGTTGGTTATaGTTTTCCATGCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFQPCWL*FSMQKG
Trigger: ACCCTTCTGCATGGAAAATCATAACCAACATGGCTG...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR TCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTGGCTTAAAAACCCAATaGACAAGTGAAGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLAGLKTQ*TSEVSL
Trigger: GAGGGAAACTTCACTTGTTCATTGGGTTTTTAAGCC...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTCTCTTGATTATCACTTaGACAAGTTCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLALLIIT*TSSAMA
Trigger: TGCCATCGCTGAACTTGTTCAAGTGATAATCAAGAG...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCACCCCTTGTTCTTTATaGTCTGGCATAAACGCTACA +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLITPCSL*SGINAT
Trigger: TGTAGCGTTTATGCCAGATCATAAAGAACAAGGGGT...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp CTATGTCAGTATAGGAACTTTGACATACATATGTACCTCCCTAACTTGAAGCAACTCAGACCTTCAGAGTaGTGGAGTCCGAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LCQYRNFDIHMYLPNLKQLRPSE*WSPRAH
Trigger: ATGAGCCCTCGGACTCCATCACTCTGAAGGTCTGAG...TTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCGTCAATGGACAACCCTaGCAAATCTTTGTTCTGATC +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIVNGQP*QIFVLI
Trigger: GATCAGAACAAAGATTTGTCAGGGTTGTCCATTGAC...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGATTGATAAATCCATGTaGATGTTATTACCAACCCCC +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQIDKSM*MLLPTP
Trigger: GGGGGTTGGTAATAACATTCACATGGATTTATCAAT...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTATGGTAGAAGTAGACTaGCAGTCCTTTTCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLAMVEVD*QSFSGV
Trigger: TACACCAGAAAAGGACTGGCAGTCTACTTCTACCAT...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCCTAGTGCAGTTCTGTaGTACACATTTTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYPSAVL*YTFLAM
Trigger: CATTGCTAAAAATGTGTAGCACAGAACTGCACTAGG...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCGGACCTAAAATAACTTaGCCAAAATCACGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFGPKIT*PKSRAG
Trigger: ACCAGCCCGTGATTTTGGGCAAGTTATTTTAGGTCC...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGTCTTCCTTTGTTCCTaGAGCAGCGTCGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRVFLCS*SSVERG
Trigger: GCCACGCTCGACGCTGCTGCAGGAACAAAGGAAGAC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCTATGGCGCCAAATACTaGTTTCACGGGAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCYGAKY*FHGKEG
Trigger: ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATA...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCCTCTGCAAGTGGTGCTaGATACCACTAAGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCLCKWC*IPLRSL
Trigger: TAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAG...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCCAGAGACCAAGTCCATaGGTGAATCTCTGTATTAGA +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIQRPSP*VNLCIR
Trigger: TCTAATACAGAGATTCACCCATGGACTTGGTCTCTG...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTTTGAAATGGAGGATATaGGACAGCTTGAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLALKWRI*DSLRGF
Trigger: AAAGCCTCTCAAGCTGTCCCATATCCTCCATTTCAA...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCTGTGTGCCTTTGAAATaGAGGATATGGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFCVPLK*RIWDSL
Trigger: CAAGCTGTCCCATATCCTCCATTTCAAAGGCACACA...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CAA 72 bp GTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTaGGTTATGATTTTCCATGCAGAAGGGTACAGTTAC +
Preference number: 4 (lower is better)
Translates to: VLDTTKKSTAAM*VMIFHAEGYSY
Trigger: GTAACTGTACCCTTCTGCATGGAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CAA 72 bp ATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTaGCACTCTGGTAATCATTTACCCCAGGTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ISTPNSITEKQQ*HSGNHLPQVKS
Trigger: TGACTTTACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCAACCCAATGAACAAGTaGAGTTTCCCTCTGTACATG +
Preference number: 4 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCNPMNK*SFPLYM
Trigger: CATGTACAGAGGGAAACTTCACTTGTTCATTGGGTT...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCCTCTTGATTATCACTTaGACAAGTTCAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCLLIIT*TSSAMA
Trigger: TGCCATCGCTGAACTTGTTCAAGTGATAATCAAGAG...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTGACCAAGTCCATGGGTaGATCTCTGTATTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGDQVHG*ISVLEP
Trigger: TGGCTCTAATACAGAGATTCACCCATGGACTTGGTC...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCACCCCTTGTTCTTTATaGTCTGGCATAAACGCTACA +
Preference number: 4 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCTPCSL*SGINAT
Trigger: TGTAGCGTTTATGCCAGATCATAAAGAACAAGGGGT...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTCAGCATGCAAAGAACTaGCAGATAAAACTAGGGTAT +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLAQHAKN*QIKLGY
Trigger: ATACCCTAGTTTTATCTGTCAGTTCTTTGCATGCTG...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCTCTTCATTTAAGAGATaGAGCAGTCCAAAGTGGACC +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFSSFKR*SSPKWT
Trigger: GGTCCACTTTGGACTGCTTCATCTCTTAAATGAAGA...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTACCCAAAAGGCAGATATaGTGCAAACATGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVPKRQI*CKHAEI
Trigger: AATCTCTGCATGTTTGCAGCATATCTGCCTTTTGGG...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCGCCCTCTGCAAGTGGTaGTGGATACCACTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGALCKW*WIPLRS
Trigger: ACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGC...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCGATAAAGCAGCCCTCTaGAAGTGGTGCTGGATACCA +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGDKAAL*KWCWIP
Trigger: TGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCCAGAGAAGCAACAGTTaGACTCTGGTAATCATTTAC +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIQRSNS*TLVIIY
Trigger: GTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTG...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTACTCACCCATTTATACTaGGAATTCATGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVLTHLY*EFMWSQ
Trigger: CTGTGACCACATGAATTCGCAGTATAAATGGGTGAG...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGCTCACCCATTTATACTaGGAATTCATGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLLTHLY*EFMWSQ
Trigger: CTGTGACCACATGAATTCGCAGTATAAATGGGTGAG...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTACTCCTGAAGGTGGTTaGTGTCTTCATTTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLATPEGG*CLHLRD
Trigger: ATCTCTTAAATGAAGACAGCAACCACCTTCAGGAGT...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGAACATCAAAGAAAAATaGCCATGCATCTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQNIKEK*PCICSL
Trigger: TAAAGAGCAGATGCATGGCCATTTTTCTTTGATGTT...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTATTTTGTTTGGCACATaGGAACTACATTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCILFGT*ELHFVP
Trigger: AGGAACAAAATGTAGTTCCCATGTGCCAAACAAAAT...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTTATGGCGCCAAATACTaGTTTCACGGGAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DFMALHSGLNARIWVELSYGAKY*FHGKEG
Trigger: ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATA...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACTTAGGACTCCAACTATaGCTTAAAAACCCAATGAAC +
Preference number: 4 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYLGLQL*LKNPMN
Trigger: GTTCATTGGGTTTTTAAGCCATAGTTGGAGTCCTAA...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTTGTGTGCCTTTGAAATaGAGGATATGGGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: DFMALHSGLNARIWVELSCVPLK*RIWDSL
Trigger: CAAGCTGTCCCATATCCTCCATTTCAAAGGCACACA...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACATTTTACTCCAGCCTaGGCGACGGAGCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRHFTPA*ATEPLS
Trigger: AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTGGCTTAAAAACCCAATaGACAAGTGAAGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: DFMALHSGLNARIWVELSGLKTQ*TSEVSL
Trigger: GAGGGAAACTTCACTTGTTCATTGGGTTTTTAAGCC...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTACAGCATGCAAAGAACTaGCAGATAAAACTAGGGTAT +
Preference number: 4 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVQHAKN*QIKLGY
Trigger: ATACCCTAGTTTTATCTGTCAGTTCTTTGCATGCTG...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACATTTTGTTTGGCACATaGGAACTACATTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYILFGT*ELHFVP
Trigger: AGGAACAAAATGTAGTTCCCATGTGCCAAACAAAAT...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCAACCAGGCTTATATATaGCGCCAAATACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFNQAYI*RQILVS
Trigger: TGAAACCAGTATTTGGCGCCATATATAAGCCTGGTT...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTTCATCTTTTACAACATaGAGAAGCGAGGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: DFMALHSGLNARIWVELSSSFTT*RSEVGH
Trigger: ATGGCCTACCTCGCTTCTCCATGTTGTAAAAGATGA...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCTTGTTCTTTATGATCTaGCATAAACGCTACAGAGAC +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLILFFMI*HKRYRD
Trigger: GTCTCTGTAGCGTTTATGCCAGATCATAAAGAACAA...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTTTGTTCTTTATGATCTaGCATAAACGCTACAGAGAC +
Preference number: 4 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLALFFMI*HKRYRD
Trigger: GTCTCTGTAGCGTTTATGCCAGATCATAAAGAACAA...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGTTGAATGCAAGAATTTaGGTAGAACTGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLLNARI*VELSPL
Trigger: GAGAGGACTCAGTTCTACCCAAATTCTTGCATTCAA...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACATTTTCCCCACGTTGTaGGAAGCCTACCTAGGATCA +
Preference number: 4 (lower is better)
Translates to: LAKDYTLITFPKGRYAANIFPTL*EAYLGS
Trigger: TGATCCTAGGTAGGCTTCCCACAACGTGGGGAAAAT...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CAA 72 bp TACATTTCAAAGGACTTCATGGCCTTGCATTCAGGTTaGAATGCAAGAATTTGGGTAGAACTGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: YISKDFMALHSG*NARIWVELSPL
Trigger: GAGAGGACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTCCTTTGAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CAA 72 bp GTTAATACTTATGGACAAAAACCACTATTGAGAACTTaGCATTCAAACAGACAAGAGTCGGCCAGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: VNTYGQKPLLRT*HSNRQESARRS
Trigger: ACTGCGCCTGGCCGACTCTTGTCTGTTTGAATGCAAAGTTCTCAATAGTGGTTTTTGTCCATAAGTATTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCTGTACCTCCCTAACTTaGAGCAAAAGTAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGCTSLT*SKSSSM
Trigger: CATGCTGCTACTTTTGCTTCAAGTTAGGGAGGTACA...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGAATGTATGTGTGCCTTTaGAATGGAGGATATGGGACA +
Preference number: 4 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRMYVCL*NGGYGT
Trigger: TGTCCCATATCCTCCATTTCAAAGGCACACATACAT...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTCTGTGTGTTTCACTTTaGTGTGCAGATTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: DFMALHSGLNARIWVELSLCVSL*CADFHP
Trigger: TGGATGAAAATCTGCACAGCAAAGTGAAACACACAG...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTAAAAAGGCAGATATGCTaGAAACATGCAGAGATTTCA +
Preference number: 4 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVKRQIC*KHAEIS
Trigger: TGAAATCTCTGCATGTTTGCAGCATATCTGCCTTTT...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGACCCAAAAGGCAGATATaGTGCAAACATGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRPKRQI*CKHAEI
Trigger: AATCTCTGCATGTTTGCAGCATATCTGCCTTTTGGG...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTATGGTAGAAGTAGACTaGCAGTCCTTTTCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGMVEVD*QSFSGV
Trigger: TACACCAGAAAAGGACTGGCAGTCTACTTCTACCAT...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCATGAGCATTTCTTCCTaGTTCCAAAGAATATGTTGT +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIMSISS*FQRICC
Trigger: ACAACATATTCTTTGGAAGCAGGAAGAAATGCTCAT...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGATAAAGCAGCCCTCTaGAAGTGGTGCTGGATACCA +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRDKAAL*KWCWIP
Trigger: TGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCTATGGCGCCAAATACTaGTTTCACGGGAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGYGAKY*FHGKEG
Trigger: ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATA...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCTTTCTTCCCAAGTTATaGAAACCATTATTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIFLPKL*KPLFQN
Trigger: GTTCTGGAATAATGGTTTCCATAACTTGGGAAGAAA...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACATGGTAGAAGTAGACTaGCAGTCCTTTTCTGGTGTA +
Preference number: 4 (lower is better)
Translates to: LAKDYTLITFPKGRYAANMVEVD*QSFSGV
Trigger: TACACCAGAAAAGGACTGGCAGTCTACTTCTACCAT...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCAACATCAAAGAAAAATaGCCATGCATCTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFNIKEK*PCICSL
Trigger: TAAAGAGCAGATGCATGGCCATTTTTCTTTGATGTT...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCATTTTGTTTGGCACATaGGAACTACATTTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFILFGT*ELHFVP
Trigger: AGGAACAAAATGTAGTTCCCATGTGCCAAACAAAAT...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGAAACCAGGCTTATATATaGCGCCAAATACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRNQAYI*RQILVS
Trigger: TGAAACCAGTATTTGGCGCCATATATAAGCCTGGTT...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACTCATCTTTTACAACATaGAGAAGCGAGGTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LAKDYTLITFPKGRYAANSSFTT*RSEVGH
Trigger: ATGGCCTACCTCGCTTCTCCATGTTGTAAAAGATGA...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTATTTCTTCCCAAGTTATaGAAACCATTATTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVFLPKL*KPLFQN
Trigger: GTTCTGGAATAATGGTTTCCATAACTTGGGAAGAAA...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGACCAAAGATTATACCTTaGTTACATTCCCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRPKIIP*LHSQKA
Trigger: TGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGG...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACAGCCATGTTGGTTATaGTTTTCCATGCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRQPCWL*FSMQKG
Trigger: ACCCTTCTGCATGGAAAATCATAACCAACATGGCTG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp CTATGTCAGTATAGGAACTTTGACATACATATGTACCTCCCTAACTTGAAGCAATTTCTCCCCAGTCAATaGACAACCCTGACAAATCTT +
Preference number: 4 (lower is better)
Translates to: LCQYRNFDIHMYLPNLKQFLPSQ*TTLTNL
Trigger: AAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAA...TTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCAAAACTTCAGGTCATaGGGGTGTAAATATTTGTCT +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGQNFRS*GCKYLS
Trigger: AGACAAATATTTACACCCCCATGACCTGAAGTTTTG...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp CTATGTCAGTATAGGAACTTTGACATACATATGTACCTCCCTAACTTGAAGCAATTGAAATGGAGGATATaGGACAGCTTGAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LCQYRNFDIHMYLPNLKQLKWRI*DSLRGF
Trigger: AAAGCCTCTCAAGCTGTCCCATATCCTCCATTTCAA...TTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGTCAATGGACAACCCTaGCAAATCTTTGTTCTGATC +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRVNGQP*QIFVLI
Trigger: GATCAGAACAAAGATTTGTCAGGGTTGTCCATTGAC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR TCA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCATTGATAAATCCATGTaGATGTTATTACCAACCCCC +
Preference number: 4 (lower is better)
Translates to: YRHITLAKDYTLITFPKGIDKSM*MLLPTP
Trigger: GGGGGTTGGTAATAACATTCACATGGATTTATCAAT...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTATGAGCATTTCTTCCTaGTTCCAAAGAATATGTTGT +
Preference number: 4 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGMSISS*FQRICC
Trigger: ACAACATATTCTTTGGAAGCAGGAAGAAATGCTCAT...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp CTATGTCAGTATAGGAACTTTGACATACATATGTACCTCCCTAACTTGAAGCAAACTCCTGAAGGTGGTTaGTGTCTTCATTTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LCQYRNFDIHMYLPNLKQTPEGG*CLHLRD
Trigger: ATCTCTTAAATGAAGACAGCAACCACCTTCAGGAGT...TTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
3UTR CAA 72 bp AAATACAGGCACATAACACTAGCCAAAGATTATACCTaGATTACATTCCCAAAAGGCAGATATGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KYRHITLAKDYT*ITFPKGRYAAN
Trigger: GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
3UTR CAA 72 bp AAGCTTCAAAGGTTATCTCAAGACCCTGTTGTTGGCTaGATGGTTTTACTTATAACCAGTTTCGATGTTTAC +
Preference number: 4 (lower is better)
Translates to: KLQRLSQDPVVG*MVLLITSFDVY
Trigger: GTAAACATCGAAACTGGTTATAAGTAAAACCATCAAGCCAACAACAGGGTCTTGAGATAACCTTTGAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACTGTGTGTTTCACTTTaGTGTGCAGATTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRLCVSL*CADFHP
Trigger: TGGATGAAAATCTGCACAGCAAAGTGAAACACACAG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR GCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACCTAGTGCAGTTCTGTaGTACACATTTTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRPSAVL*YTFLAM
Trigger: CATTGCTAAAAATGTGTAGCACAGAACTGCACTAGG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGATTGAATGCAAGAATTTaGGTAGAACTGAGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRLNARI*VELSPL
Trigger: GAGAGGACTCAGTTCTACCCAAATTCTTGCATTCAA...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CCA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACAAAACTTCAGGTCATaGGGGTGTAAATATTTGTCT +
Preference number: 4 (lower is better)
Translates to: NSDACYSIELLYVKTKRRQNFRS*GCKYLS
Trigger: AGACAAATATTTACACCCCCATGACCTGAAGTTTTG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS TCA 90 bp GCGAGCGGACCGCGCGCCGCGAGGCCTGGGGCCGTAAGGGCCCGCTaGTGGCGCTCTTCGCCGCTCCTGCCACCGCCGGGGAAGCTGCGC +
Preference number: 5 (lower is better)
Translates to: ASGPRAARPGAVRAR*WRSSPLLPPPGKLR
Trigger: GCGCAGCTTCCCCGGCGGTGGCAGGAGCGGCGAAGAGCGCCATCAGCGGGCCCTTACGGCCCCAGGCCTCGCGGCGCGCGGTCCGCTCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS CCA 90 bp TGCCGCCGCCGCGGGCCGGGAGCGGGTCGGAGCAGCAGGCGGAGGTaGCGCCGCCGCCGCCGCGGGGTCTTCCTTTGTTCCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CRRRGPGAGRSSRRR*RRRRRGVFLCSCSS
Trigger: GCTGCTGCAGGAACAAAGGAAGACCCCGCGGCGGCGGCGGCGCCACCTCCGCCTGCTGCTCCGACCCGCTCCCGGCCCGCGGCGGCGGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376960.8
ENST00000376962.10
ENST00000487330.1
CDS CCA 90 bp GGTTGGGCGGACGAGGAGGGCGAGCGGACCGCGCGCCGCGAGGCCTaGGGCCGTAAGGGCCCGCTGATGGCGCTCTTCGCCGCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: GWADEEGERTARREA*GRKGPLMALFAAPA
Trigger: GGCAGGAGCGGCGAAGAGCGCCATCAGCGGGCCCTTACGGCCCCAGGCCTCGCGGCGCGCGGTCCGCTCGCCCTCCTCGTCCGCCCAACC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS CCA 90 bp GAGGCGCTCGCCTGTCGTCGCCTCACGCCTCCACAGGCCGCAGGTTaGGCGGACGAGGAGGGCGAGCGGACCGCGCGCCGCGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: EALACRRLTPPQAAG*ADEEGERTARREAW
Trigger: CCAGGCCTCGCGGCGCGCGGTCCGCTCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGGAGGCGTGAGGCGACGACAGGCGAGCGCCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS TCA 90 bp GGGTCCCAAATGCGAAAGCCGGGTTCGCGCGCGAAGCCGGCACGATaGGGCCGGGCCGAGGCCTCCGGGAAGGCTGAGCCGGGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: GSQMRKPGSRAKPAR*GRAEASGKAEPGAL
Trigger: CAGGGCGCCCGGCTCAGCCTTCCCGGAGGCCTCGGCCCGGCCTCATCGTGCCGGCTTCGCGCGCGAACCCGGCTTTCGCATTTGGGACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376960.8
ENST00000376962.10
ENST00000487330.1
CDS GCA 90 bp CCCGCTGATGGCGCTCTTCGCCGCTCCTGCCACCGCCGGGGAAGCTaGGCGGCTCCCGGGAGCGAGCGAGCCCGCGTAGGAGATGCACAC +
Preference number: 5 (lower is better)
Translates to: PADGALRRSCHRRGS*AAPGSERARVGDAH
Trigger: GTGTGCATCTCCTACGCGGGCTCGCTCGCTCCCGGGAGCCGCGCAGCTTCCCCGGCGGTGGCAGGAGCGGCGAAGAGCGCCATCAGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS TCA 90 bp GAGCCAGGGACGCCGGGAGCCAGGTCTCGGGCCACGACGACAGGATaGCGCCTCCGTCTTTGTGCTTCCTGGGCTGGCGGGCGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: EPGTPGARSRATTTG*RLRLCASWAGGRAP
Trigger: GGGAGCCCGCCCGCCAGCCCAGGAAGCACAAAGACGGAGGCGTCATCCTGTCGTCGTGGCCCGAGACCTGGCTCCCGGCGTCCCTGGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000343431.6
ENST00000376956.3
CDS CCA 90 bp CCGCCGCCGCGGGGTCTTCCTTTGTTCCTGCAGCAGCGTCGAGCGTaGCCGGGACACGCCGGAGCTCGGGAAGTGGGAGGAGGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: PPPRGLPLFLQQRRA*PGHAGAREVGGGKR
Trigger: TCGCTTCCCTCCTCCCACTTCCCGAGCTCCGGCGTGTCCCGGCCACGCTCGACGCTGCTGCAGGAACAAAGGAAGACCCCGCGGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376960.8
ENST00000376962.10
ENST00000487330.1
CDS-3UTR CAA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTTCCACAGGCCGCAGGTaGGGCGGACGAGGAGGGCGA +
Preference number: 5 (lower is better)
Translates to: SELRPCHFTPAWATEPLSSTGRR*GGRGGR
Trigger: TCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGGA...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS TCA 90 bp AGGCCTCACTCAATAAAGCCCAACAGGGCCCTCTCCGAAAACCACTaGGTCATGCAGAACAGCAGCTCAGCAGGCCCGGCCAGCCCTTCG +
Preference number: 5 (lower is better)
Translates to: RPHSIKPNRALSENH*VMQNSSSAGPASPS
Trigger: CGAAGGGCTGGCCGGGCCTGCTGAGCTGCTGTTCTGCATGACTCAGTGGTTTTCGGAGAGGGCCCTGTTGGGCTTTATTGAGTGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488164.5
CDS-3UTR CAA 90 bp AGTGAGCTGAGACCATGCCATTTTACTCCAGCCTGGGCGACGGAGCCTCTGTCTACTAAGTCAGTGACCTaGGGCAAGTCCTTACTTTCC +
Preference number: 5 (lower is better)
Translates to: SELRPCHFTPAWATEPLSTKSVT*GKSLLS
Trigger: GGAAAGTAAGGACTTGCCCAAGGTCACTGACTTAGT...AGACAGAGGCTCCGTCGCCCAGGCTGGAGTAAAATGGCATGGTCTCAGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS-3UTR CAA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACTCCACAGGCCGCAGGTaGGGCGGACGAGGAGGGCGA +
Preference number: 5 (lower is better)
Translates to: LAKDYTLITFPKGRYAANSTGRR*GGRGGR
Trigger: TCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGGA...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCCGCGGGGTCTTCCTTaGTTCCTGCAGCAGCGTCGA +
Preference number: 5 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFPRGLP*FLQQRR
Trigger: TCGACGCTGCTGCAGGAACAAAGGAAGACCCCGCGG...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTATGACGCCTCCGTCTTaGTGCTTCCTGGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGMTPPS*CFLGWR
Trigger: CCGCCAGCCCAGGAAGCACAAAGACGGAGGCGTCAT...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237937.7
CDS-3UTR CAA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGGCCAAGATTACGCCATaGCACTGCAGCCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLAKITP*HCSLAK
Trigger: TTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGGC...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GCCAGGCACAGTTTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTTTTGTTAACAGCCTGTaGCCTCACCCATGCAAACTC +
Preference number: 5 (lower is better)
Translates to: ARHSFKCCHLHTPEGGCCFVNSL*PHPCKL
Trigger: GAGTTTGCATGGGTGAGGCAACAGGCTGTTAACAAA...ACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAAACTGTGCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCCACAGGCACATTTCTaGATTTTTCAGATGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYPQAHF*IFQMCC
Trigger: GCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGG...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACCGCGGGGTCTTCCTTaGTTCCTGCAGCAGCGTCGA +
Preference number: 5 (lower is better)
Translates to: NSDACYSIELLYVKTKRRPRGLP*FLQQRR
Trigger: TCGACGCTGCTGCAGGAACAAAGGAAGACCCCGCGG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACTCTACTGCAGCCATGTaGGTTATGATTTTCCATGCA +
Preference number: 5 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYSTAAM*VMIFHA
Trigger: TGCATGGAAAATCATAACCAACATGGCTGCAGTAGA...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTAAGGACTTCATGGCCTaGCATTCAGGTTTGAATGCA +
Preference number: 5 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLAKDFMA*HSGLNA
Trigger: TGCATTCAAACCTGAATGCAAGGCCATGAAGTCCTT...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACAATGTATGTGTGCCTTaGAAATGGAGGATATGGGAC +
Preference number: 5 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYNVCVP*KWRIWD
Trigger: GTCCCATATCCTCCATTTCAAAGGCACACATACATT...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACCACTAAGAAGTCTACTGCAGGGCTACATAATCTTATaGCTAATCAACCAGCAACCA +
Preference number: 5 (lower is better)
Translates to: DKAALCKWCWIPLRSLLQGYIIL*LINQQP
Trigger: TGGTTGCTGGTTGATTAGCAATAAGATTATGTAGCC...CTGCAGTAGACTTCTTAGTGGTATCCAGCACCACTTGCAGAGGGCTGCTTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGCCACAGGCACATTTCTaGATTTTTCAGATGTGCTGC +
Preference number: 5 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLPQAHF*IFQMCC
Trigger: GCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGG...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACGCCAAAGATTATACCTaGATTACATTCCCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYAKDYT*ITFPKG
Trigger: GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGC...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCGACCCTGTTGTTGGCTaGATGGTTTTACTTATAACC +
Preference number: 5 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIDPVVG*MVLLIT
Trigger: GGTTATAAGTAAAACCATCAAGCCAACAACAGGGTC...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACACAGAGAAGCAACAGTaGCACTCTGGTAATCATTTA +
Preference number: 5 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYTEKQQ*HSGNHL
Trigger: TAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGT...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp ACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTCTGATCGCCTTGCATTCAGGTTaGAATGCAAGAATTTGGGTA +
Preference number: 5 (lower is better)
Translates to: TRLIYGAKYWFHGKEGLIALHSG*NARIWV
Trigger: TACCCAAATTCTTGCATTCAAACCTGAATGCAAGGC...GATCAGACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGAAGGATATGGGACAGCTaGAGAGGCTTTGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRRIWDS*RGFASQ
Trigger: CTGAGAAGCAAAGCCTCTCAAGCTGTCCCATATCCT...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTTTTGTTAACAGCCTGTaGCCTCACCCATGCAAACTC +
Preference number: 5 (lower is better)
Translates to: DFMALHSGLNARIWVELSFVNSL*PHPCKL
Trigger: GAGTTTGCATGGGTGAGGCAACAGGCTGTTAACAAA...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS CCA 90 bp CAGGTGTTCTCTCCATGTGCTTTCAGCATTCTCAGCCCCAATTCTTaGTTCTGTATTTCTGTCCACCAGTTCTTTCAAATGTGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: QVFSPCAFSILSPNS*FCISVHQFFQMCFS
Trigger: GGAAAAACACATTTGAAAGAACTGGTGGACAGAAATACAGAACCAAGAATTGGGGCTGAGAATGCTGAAAGCACATGGAGAGAACACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487330.1
CDS-3UTR CAA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGTCTGTGTGTTTCACTTaGCTGTGCAGATTTTCATCC +
Preference number: 5 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLSVCFT*LCRFSS
Trigger: GGATGAAAATCTGCACAGCAAAGTGAAACACACAGA...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTATCTCTTGATTATCACTaGAACAAGTTCAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVSLDYH*NKFSDG
Trigger: GCCATCGCTGAACTTGTTCAAGTGATAATCAAGAGA...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGTCTCTTGATTATCACTaGAACAAGTTCAGCGATGGC +
Preference number: 5 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLSLDYH*NKFSDG
Trigger: GCCATCGCTGAACTTGTTCAAGTGATAATCAAGAGA...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CCAAGATTACGCCATTGCACTGCAGCCTGGCCAAACAAAAATCTATCTCTTGCTACAGAGAAGCAACAGTaGCACTCTGGTAATCATTTA +
Preference number: 5 (lower is better)
Translates to: PRLRHCTAAWPNKNLSLATEKQQ*HSGNHL
Trigger: TAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGT...AGCAAGAGATAGATTTTTGTTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGCCAAGATTACGCCATaGCACTGCAGCCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: NSDACYSIELLYVKTKRRAKITP*HCSLAK
Trigger: TTTGGCCAGGCTGCAGTGCAATGGCGTAATCTTGGC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACCTAATTTTCCCCACGTaGTGGGAAGCCTACCTAGGA +
Preference number: 5 (lower is better)
Translates to: LAKDYTLITFPKGRYAANLIFPT*WEAYLG
Trigger: TCCTAGGTAGGCTTCCCACAACGTGGGGAAAATTAG...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CCTACACCCAAGTACAATATGATAAAGCAGCCCTCTGCAAGTGGTGCTGGATACGCTTCTCAGTGTGTATaGATAAATCCATGTGAATGT +
Preference number: 5 (lower is better)
Translates to: PTPKYNMIKQPSASGAGYASQCV*INPCEC
Trigger: ACATTCACATGGATTTATCAATACACACTGAGAAGC...GTATCCAGCACCACTTGCAGAGGGCTGCTTTATCATATTGTACTTGGGTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGACCACAGGCACATTTCTaGATTTTTCAGATGTGCTGC +
Preference number: 5 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRPQAHF*IFQMCC
Trigger: GCAGCACATCTGAAAAATCAAGAAATGTGCCTGTGG...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTAGTCAGTATAGGAACTTaGACATACATATGTACCTCC +
Preference number: 5 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVVSIGT*TYICTS
Trigger: GGAGGTACATATGTATGTCAAAGTTCCTATACTGAC...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCGTCAGTATAGGAACTTaGACATACATATGTACCTCC +
Preference number: 5 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCVSIGT*TYICTS
Trigger: GGAGGTACATATGTATGTCAAAGTTCCTATACTGAC...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp ATTCCCTTTCTCCCCAGTCAATGGACAACCCTGACAAATCTTTGTTCTGATCTGTTTAATGCAGATCTCTaGCAAAGAAAGCCTTACGGA +
Preference number: 5 (lower is better)
Translates to: IPFLPSQWTTLTNLCSDLFNADL*QRKPYG
Trigger: TCCGTAAGGCTTTCTTTGCAAGAGATCTGCATTAAA...CAGATCAGAACAAAGATTTGTCAGGGTTGTCCATTGACTGGGGAGAAAGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTATTTAATGCAGATCTCTaGCAAAGAAAGCCTTACGGA +
Preference number: 5 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVFNADL*QRKPYG
Trigger: TCCGTAAGGCTTTCTTTGCAAGAGATCTGCATTAAA...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GACTTCATGGCCTTGCATTCAGGTTTGAATGCAAGAATTTGGGTAGAACTGAGTAATGTATGTGTGCCTTaGAAATGGAGGATATGGGAC +
Preference number: 5 (lower is better)
Translates to: DFMALHSGLNARIWVELSNVCVP*KWRIWD
Trigger: GTCCCATATCCTCCATTTCAAAGGCACACATACATT...ACTCAGTTCTACCCAAATTCTTGCATTCAAACCTGAATGCAAGGCCATGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTAGGCTACATAATCTTATaGCTAATCAACCAGCAACCA +
Preference number: 5 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVGYIIL*LINQQP
Trigger: TGGTTGCTGGTTGATTAGCAATAAGATTATGTAGCC...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCATTTCCAGTTTCTTTTaGTTAACAGCCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFISSFF*LTACCL
Trigger: GAGGCAACAGGCTGTTAACAAAAAGAAACTGGAAAT...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTAATTTCAGTTCCCTCTTaGCCAAATGGAGTAGAATTG +
Preference number: 5 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVISVPS*PNGVEL
Trigger: CAATTCTACTCCATTTGGCAAAGAGGGAACTGAAAT...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS CCA 90 bp CCAGGTTTAAGAACGGGGATGTGTGACCTATATGTTCCTTTATCTTaGTATCTCCTTAGATGCTATCCCTTAGGAGACACTCAATCAATA +
Preference number: 5 (lower is better)
Translates to: PGLRTGMCDLYVPLS*YLLRCYPLGDTQSI
Trigger: TATTGATTGAGTGTCTCCTAAGGGATAGCATCTAAGGAGATACCAAGATAAAGGAACATATAGGTCACACATCCCCGTTCTTAAACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488164.5
CDS-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTACACAGAATGTCTTATTaGACAGCTTTAGATGACCAA +
Preference number: 5 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVHRMSY*TALDDQ
Trigger: TTGGTCATCTAAAGCTGTCAAATAAGACATTCTGTG...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GTGGTGCTGGATACCACTAAGAAGTCTACTGCAGCCATGTTGGTTATGATTTTCCACAGAATGTCTTATTaGACAGCTTTAGATGACCAA +
Preference number: 5 (lower is better)
Translates to: VVLDTTKKSTAAMLVMIFHRMSY*TALDDQ
Trigger: TTGGTCATCTAAAGCTGTCAAATAAGACATTCTGTG...GAAAATCATAACCAACATGGCTGCAGTAGACTTCTTAGTGGTATCCAGCACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTGACCCTGTTGTTGGCTaGATGGTTTTACTTATAACC +
Preference number: 5 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGDPVVG*MVLLIT
Trigger: GGTTATAAGTAAAACCATCAAGCCAACAACAGGGTC...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp TTTAAGTGTTGTCACCTTCACACTCCTGAAGGTGGTTGCTGTCTTCATTTAAGATCTACTGCAGCCATGTaGGTTATGATTTTCCATGCA +
Preference number: 5 (lower is better)
Translates to: FKCCHLHTPEGGCCLHLRSTAAM*VMIFHA
Trigger: TGCATGGAAAATCATAACCAACATGGCTGCAGTAGA...TCTTAAATGAAGACAGCAACCACCTTCAGGAGTGTGAAGGTGACAACACTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGACTAATTTTCCCCACGTaGTGGGAAGCCTACCTAGGA +
Preference number: 5 (lower is better)
Translates to: NSDACYSIELLYVKTKRRLIFPT*WEAYLG
Trigger: TCCTAGGTAGGCTTCCCACAACGTGGGGAAAATTAG...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AACTCCATCACAGAGAAGCAACAGTTGCACTCTGGTAATCATTTACCCCAGGTAGGACAAAAACCACTATaGAGAACTTTGCATTCAAAC +
Preference number: 5 (lower is better)
Translates to: NSITEKQQLHSGNHLPQVGQKPL*RTLHSN
Trigger: GTTTGAATGCAAAGTTCTCAATAGTGGTTTTTGTCC...TACCTGGGGTAAATGATTACCAGAGTGCAACTGTTGCTTCTCTGTGATGGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp GATAAAACTAGGGTATTTCCACCCCAAACTCCATCACAGAGAAGCAACAGTTGCGGACAAAAACCACTATaGAGAACTTTGCATTCAAAC +
Preference number: 5 (lower is better)
Translates to: DKTRVFPPQTPSQRSNSCGQKPL*RTLHSN
Trigger: GTTTGAATGCAAAGTTCTCAATAGTGGTTTTTGTCC...GCAACTGTTGCTTCTCTGTGATGGAGTTTGGGGTGGAAATACCCTAGTTTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CTATGTCAGTATAGGAACTTTGACATACATATGTACCTCCCTAACTTGAAGCAAAAGGACTTCATGGCCTaGCATTCAGGTTTGAATGCA +
Preference number: 5 (lower is better)
Translates to: LCQYRNFDIHMYLPNLKQKDFMA*HSGLNA
Trigger: TGCATTCAAACCTGAATGCAAGGCCATGAAGTCCTT...TTGCTTCAAGTTAGGGAGGTACATATGTATGTCAAAGTTCCTATACTGACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTTAACCAGGCTTATATATGGCGCCAAATACTGGTTTCACGGGAAAGAAGGTATTTCCAGTTTCTTTTaGTTAACAGCCTGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: NLTRLIYGAKYWFHGKEGISSFF*LTACCL
Trigger: GAGGCAACAGGCTGTTAACAAAAAGAAACTGGAAAT...ACCTTCTTTCCCGTGAAACCAGTATTTGGCGCCATATATAAGCCTGGTTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACGCCAAAGATTATACCTaGATTACATTCCCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: LAKDYTLITFPKGRYAANAKDYT*ITFPKG
Trigger: GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGC...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp TACAGGCACATAACACTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCTTTGAATGCAAGAATTaGGGTAGAACTGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: YRHITLAKDYTLITFPKGFECKN*GRTESS
Trigger: AGAGGACTCAGTTCTACCCAAATTCTTGCATTCAAA...GCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAGTGTTATGTGCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACCACAGAATGTCTTATTaGACAGCTTTAGATGACCAA +
Preference number: 5 (lower is better)
Translates to: LAKDYTLITFPKGRYAANHRMSY*TALDDQ
Trigger: TTGGTCATCTAAAGCTGTCAAATAAGACATTCTGTG...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000376960.8
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGCCTTGCATTCAGGTTaGAATGCAAGAATTTGGGTA +
Preference number: 5 (lower is better)
Translates to: NSDACYSIELLYVKTKRRALHSG*NARIWV
Trigger: TACCCAAATTCTTGCATTCAAACCTGAATGCAAGGC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS-3UTR CAA 90 bp CTAGCCAAAGATTATACCTTGATTACATTCCCAAAAGGCAGATATGCTGCAAACCCAAATGGAGTAGAATaGACTTTTAAAGGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LAKDYTLITFPKGRYAANPNGVE*TFKGSF
Trigger: AAAGGAGCCTTTAAAAGTCAATTCTACTCCATTTGG...GTTTGCAGCATATCTGCCTTTTGGGAATGTAATCAAGGTATAATCTTTGGCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376962.10
CDS-3UTR CAA 90 bp AATTCAGATGCATGTTATTCAATAGAGCTGCTGTATGTGAAAACCAAACGTAGAGCTTCTCAGTGTGTATaGATAAATCCATGTGAATGT +
Preference number: 5 (lower is better)
Translates to: NSDACYSIELLYVKTKRRASQCV*INPCEC
Trigger: ACATTCACATGGATTTATCAATACACACTGAGAAGC...TCTACGTTTGGTTTTCACATACAGCAGCTCTATTGAATAACATGCATCTGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237937.7
ENST00000376962.10
CDS CCA 72 bp GACGCCGCCATCCGCGGCCTGCTCCGGCTTCGCCATTaGCCCGCGGCGCCCCGGTCCCTTCACTCCCGCCCC +
Preference number: 6 (lower is better)
Translates to: DAAIRGLLRLRH*PAAPRSLHSRP
Trigger: GGGGCGGGAGTGAAGGGACCGGGGCGCCGCGGGCCAATGGCGAAGCCGGAGCAGGCCGCGGATGGCGGCGTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376956.3
CDS CAA 90 bp CGAGGCGCTCGCCTGTCGTCGCCTCACGCCTCCACAGGCCGCAGGTaGGGCGGACGAGGAGGGCGAGCGGACCGCGCGCCGCGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: RGARLSSPHASTGRR*GGRGGRADRAPRGL
Trigger: CAGGCCTCGCGGCGCGCGGTCCGCTCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGGAGGCGTGAGGCGACGACAGGCGAGCGCCTCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS GCA 72 bp GGCGCTCTTCGCCGCTCCTGCCACCGCCGGGGAAGCTaGGCGGCTCCCGGGAGCGAGCGAGCCCGCGTAGGA +
Preference number: 6 (lower is better)
Translates to: GALRRSCHRRGS*AAPGSERARVG
Trigger: TCCTACGCGGGCTCGCTCGCTCCCGGGAGCCGCGCAGCTTCCCCGGCGGTGGCAGGAGCGGCGAAGAGCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS CCA 72 bp GACGAGGAGGGCGAGCGGACCGCGCGCCGCGAGGCCTaGGGCCGTAAGGGCCCGCTGATGGCGCTCTTCGCC +
Preference number: 6 (lower is better)
Translates to: DEEGERTARREA*GRKGPLMALFA
Trigger: GGCGAAGAGCGCCATCAGCGGGCCCTTACGGCCCCAGGCCTCGCGGCGCGCGGTCCGCTCGCCCTCCTCGTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS CCA 72 bp GCCTGTCGTCGCCTCACGCCTCCACAGGCCGCAGGTTaGGCGGACGAGGAGGGCGAGCGGACCGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: ACRRLTPPQAAG*ADEEGERTARR
Trigger: GCGGCGCGCGGTCCGCTCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGGAGGCGTGAGGCGACGACAGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS CAA 72 bp CGCCTGTCGTCGCCTCACGCCTCCACAGGCCGCAGGTaGGGCGGACGAGGAGGGCGAGCGGACCGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: RLSSPHASTGRR*GGRGGRADRAP
Trigger: CGGCGCGCGGTCCGCTCGCCCTCCTCGTCCGCCCAACCTGCGGCCTGTGGAGGCGTGAGGCGACGACAGGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376960.8
ENST00000376962.10
CDS GCA 72 bp TGGCGCCGCCGCCGCCGCGGGGTCTTCCTTTGTTCCTaGAGCAGCGTCGAGCGTGGCCGGGACACGCCGGAG +
Preference number: 6 (lower is better)
Translates to: WRRRRRGVFLCS*SSVERGRDTPE
Trigger: CTCCGGCGTGTCCCGGCCACGCTCGACGCTGCTGCAGGAACAAAGGAAGACCCCGCGGCGGCGGCGGCGCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376960.8
ENST00000376962.10
ENST00000487330.1
CDS CAA 72 bp GTCTCGGGCCACGACGACAGGATGACGCCTCCGTCTTaGTGCTTCCTGGGCTGGCGGGCGGGCTCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: VSGHDDRMTPPS*CFLGWRAGSPP
Trigger: GGGAGGGGAGCCCGCCCGCCAGCCCAGGAAGCACAAAGACGGAGGCGTCATCCTGTCGTCGTGGCCCGAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000343431.6
ENST00000376956.3
CDS TCA 72 bp ACGCCGGGAGCCAGGTCTCGGGCCACGACGACAGGATaGCGCCTCCGTCTTTGTGCTTCCTGGGCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: TPGARSRATTTG*RLRLCASWAGG
Trigger: CCCGCCAGCCCAGGAAGCACAAAGACGGAGGCGTCATCCTGTCGTCGTGGCCCGAGACCTGGCTCCCGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237937.7
ENST00000343431.6
ENST00000376956.3
CDS CCA 72 bp CGGGGTCTTCCTTTGTTCCTGCAGCAGCGTCGAGCGTaGCCGGGACACGCCGGAGCTCGGGAAGTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: RGLPLFLQQRRA*PGHAGAREVGG
Trigger: TCCTCCCACTTCCCGAGCTCCGGCGTGTCCCGGCCACGCTCGACGCTGCTGCAGGAACAAAGGAAGACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376960.8
ENST00000376962.10
ENST00000487330.1
CDS TCA 72 bp TCAATAAAGCCCAACAGGGCCCTCTCCGAAAACCACTaGGTCATGCAGAACAGCAGCTCAGCAGGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: SIKPNRALSENH*VMQNSSSAGPA
Trigger: GGCCGGGCCTGCTGAGCTGCTGTTCTGCATGACTCAGTGGTTTTCGGAGAGGGCCCTGTTGGGCTTTATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488164.5
CDS CAA 72 bp GGGCAAGTCCTTACTTTCCAGATTTCAGTTCCCTCTTaGCCAAATGGAGTAGAATTGACTTTTAAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: GQVLTFQISVPS*PNGVELTFKGS
Trigger: GGAGCCTTTAAAAGTCAATTCTACTCCATTTGGCAAAGAGGGAACTGAAATCTGGAAAGTAAGGACTTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343431.6
ENST00000376962.10
ENST00000488164.5
CDS CAA 90 bp TCAGGTGTTCTCTCCATGTGCTTTCAGCATTCTCAGCCCCAATTCTaGGTTCTGTATTTCTGTCCACCAGTTCTTTCAAATGTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: SGVLSMCFQHSQPQF*VLYFCPPVLSNVFF
Trigger: GAAAAACACATTTGAAAGAACTGGTGGACAGAAATACAGAACCAAGAATTGGGGCTGAGAATGCTGAAAGCACATGGAGAGAACACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487330.1
CDS CAA 90 bp ATGCTTGTAGATAGTCATTCATTCCTGATCAGTCATGTCAAGCACTaGGGCTGTTGCTTGAATTTCAAGCTCTTATCAGGTGTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: MLVDSHSFLISHVKH*GCCLNFKLLSGVLS
Trigger: GGAGAGAACACCTGATAAGAGCTTGAAATTCAAGCAACAGCCCAAGTGCTTGACATGACTGATCAGGAATGAATGACTATCTACAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487330.1
CDS CAA 72 bp GATAGTCATTCATTCCTGATCAGTCATGTCAAGCACTaGGGCTGTTGCTTGAATTTCAAGCTCTTATCAGGT +
Preference number: 6 (lower is better)
Translates to: DSHSFLISHVKH*GCCLNFKLLSG
Trigger: ACCTGATAAGAGCTTGAAATTCAAGCAACAGCCCAAGTGCTTGACATGACTGATCAGGAATGAATGACTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487330.1