RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFAND3 (Homo sapiens)

Ensembl gene IDs: ENSG00000156639

Ensembl transcript IDs: ENST00000287218.9, ENST00000373389.5, ENST00000373391.6, ENST00000440482.2, ENST00000463847.1, ENST00000469208.1, ENST00000474522.5

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACGCTGCCTCCGCAGGGGCCTCCTGCCCTCACCCACCTGGATCTaGTGCGGCACTAGGACCACTGGGACTGCTCACCCTGCCTGGGCT +
Preference number: 1 (lower is better)
Translates to: PRCLRRGLLPSPTWI*CGTRTTGTAHPAWA
Trigger: AGCCCAGGCAGGGTGAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGAGGCCCCTGCGGAGGCAGCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 90 bp CCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCCAGATCCCTaGACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCGGGGCACTC +
Preference number: 1 (lower is better)
Translates to: PRCAAIRHIWSVPDP*TGEWQTRAGGGGAL
Trigger: GAGTGCCCCGCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 90 bp AGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTaGCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAG +
Preference number: 1 (lower is better)
Translates to: RPSHRAVLPFATSGP*QIPALANGRPEPAE
Trigger: CTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp GCCATTCGCCACATCTGGTCCGTGCCAGATCCCTGCACTGGCGAATaGCAGACCAGAGCCGGCGGAGGCGGGGCACTCTGGCTGCTTCTC +
Preference number: 1 (lower is better)
Translates to: AIRHIWSVPDPCTGE*QTRAGGGGALWLLL
Trigger: GAGAAGCAGCCAGAGTGCCCCGCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp CTGTGCTGCCATTCGCCACATCTGGTCCGTGCCAGATCCCTGCACTaGCGAATGGCAGACCAGAGCCGGCGGAGGCGGGGCACTCTGGCT +
Preference number: 1 (lower is better)
Translates to: LCCHSPHLVRARSLH*RMADQSRRRRGTLA
Trigger: AGCCAGAGTGCCCCGCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp AGGGCTCGCACAGCCTCTTCGGGACCAGAGCTTGGCGGAAGCCTATaGGGGGCTGCCTCACTGAGGATGGCCCGTATGGTGGCCAAGGGC +
Preference number: 1 (lower is better)
Translates to: RARTASSGPELGGSL*GAASLRMARMVAKG
Trigger: GCCCTTGGCCACCATACGGGCCATCCTCAGTGAGGCAGCCCCCCATAGGCTTCCGCCAAGCTCTGGTCCCGAAGAGGCTGTGCGAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 90 bp TCTGGCTGCAGAGGCCAGTGTGCAGACCCAGCCACCGCGCTGTGCTaGCATTCGCCACATCTGGTCCGTGCCAGATCCCTGCACTGGCGA +
Preference number: 1 (lower is better)
Translates to: SGCRGQCADPATALC*HSPHLVRARSLHWR
Trigger: TCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACACTGGCCTCTGCAGCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp GCCACCACCCAGCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTaGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTGGGACT +
Preference number: 1 (lower is better)
Translates to: ATTQPSHVANLSSLP*PRHTWPSGILATGT
Trigger: AGTCCCAGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGCTGGGTGGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp GGGGGCTGCCTCACTGAGGATGGCCCGTATGGTGGCCAAGGGCTGTaGCTTGACAGCAGTGGTAAACGCTGGGCAGACCTGGCCCCTCTG +
Preference number: 1 (lower is better)
Translates to: GGCLTEDGPYGGQGL*LDSSGKRWADLAPL
Trigger: CAGAGGGGCCAGGTCTGCCCAGCGTTTACCACTGCTGTCAAGCCACAGCCCTTGGCCACCATACGGGCCATCCTCAGTGAGGCAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp AGTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTaGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCC +
Preference number: 1 (lower is better)
Translates to: SVQTQPPRCAAIRHI*SVPDPCTGEWQTRA
Trigger: GGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR TCA 90 bp GGCAGACCAGAGCCGGCGGAGGCGGGGCACTCTGGCTGCTTCTCGTaGCCTTGGATCCTGTGTAGAAAAGGCGGGTCTCGTTCGTGGACT +
Preference number: 1 (lower is better)
Translates to: GRPEPAEAGHSGCFS*PWILCRKGGSRSWT
Trigger: AGTCCACGAACGAGACCCGCCTTTTCTACACAGGATCCAAGGTCACGAGAAGCAGCCAGAGTGCCCCGCCTCCGCCGGCTCTGGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 90 bp AAATCTGGCTGCAGAGGCCAGTGTGCAGACCCAGCCACCGCGCTGTaGTGCCATTCGCCACATCTGGTCCGTGCCAGATCCCTGCACTGG +
Preference number: 1 (lower is better)
Translates to: KSGCRGQCADPATAL*CHSPHLVRARSLHW
Trigger: CCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACACTGGCCTCTGCAGCCAGATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp CCGTATGGTGGCCAAGGGCTGTGGCTTGACAGCAGTGGTAAACGCTaGGCAGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGAC +
Preference number: 1 (lower is better)
Translates to: PYGGQGLWLDSSGKR*ADLAPLPWVALEQD
Trigger: GTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCTGCCCAGCGTTTACCACTGCTGTCAAGCCACAGCCCTTGGCCACCATACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp CTTGACAGCAGTGGTAAACGCTGGGCAGACCTGGCCCCTCTGCCCTaGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCTGAAGCAAGA +
Preference number: 1 (lower is better)
Translates to: LDSSGKRWADLAPLP*VALEQDTGLGPEAR
Trigger: TCTTGCTTCAGGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCTGCCCAGCGTTTACCACTGCTGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp TCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTaGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCA +
Preference number: 1 (lower is better)
Translates to: SAASRGQGTRGHQVS*LLGLRISEEVKGRS
Trigger: TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp TACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTaGGCCACAGCCACAAACCGCTGTTCTAGACAGATCCAAACCCAC +
Preference number: 1 (lower is better)
Translates to: YPQALTYQSKYHSRS*ATATNRCSRQIQTH
Trigger: GTGGGTTTGGATCTGTCTAGAACAGCGGTTTGTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp AAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGTaGGTGGAGGGTGGGAAGAGCATGACTTCCTATTTCAGTACGTCG +
Preference number: 1 (lower is better)
Translates to: KQELRLGILQRVPLW*VEGGKSMTSYFSTS
Trigger: CGACGTACTGAAATAGGAAGTCATGCTCTTCCCACCCTCCACCCACCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp CTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTaGTGGGTGGAGGGTGGGAAGAGCATGACTTCCTATTTCAGTACG +
Preference number: 1 (lower is better)
Translates to: LKQELRLGILQRVPL*WVEGGKSMTSYFST
Trigger: CGTACTGAAATAGGAAGTCATGCTCTTCCCACCCTCCACCCACCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 90 bp CGCTGTTCTAGACAGATCCAAACCCACTGTCCCTGGGACGTATGCTaGCTTCCCTTACTAAACTTGCTATATGGTAGATGTGGACTGGGT +
Preference number: 1 (lower is better)
Translates to: RCSRQIQTHCPWDVC*LPLLNLLYGRCGLG
Trigger: ACCCAGTCCACATCTACCATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTGTCTAGAACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR TCA 90 bp CACACGTGGCCATCAGGTATCCTGGCTACTGGGACTAAGGATAAGTaGAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGC +
Preference number: 1 (lower is better)
Translates to: HTWPSGILATGTKDK*RGERPIIKQSFWQS
Trigger: GCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTGATGGCCACGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 90 bp AACCGCTGTTCTAGACAGATCCAAACCCACTGTCCCTGGGACGTATaGTGCCTTCCCTTACTAAACTTGCTATATGGTAGATGTGGACTG +
Preference number: 1 (lower is better)
Translates to: NRCSRQIQTHCPWDV*CLPLLNLLYGRCGL
Trigger: CAGTCCACATCTACCATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTGTCTAGAACAGCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 90 bp ACAGCCACAAACCGCTGTTCTAGACAGATCCAAACCCACTGTCCCTaGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATGGTAGA +
Preference number: 1 (lower is better)
Translates to: TATNRCSRQIQTHCP*DVCCLPLLNLLYGR
Trigger: TCTACCATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTGTCTAGAACAGCGGTTTGTGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 90 bp GAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTaGGTCGTGGGAACTTTAACACCAGCTTCTACTCCTCTATTAACT +
Preference number: 1 (lower is better)
Translates to: EVKGRSLNRVSGKAM*VVGTLTPASTPLLT
Trigger: AGTTAATAGAGGAGTAGAAGCTGGTGTTAAAGTTCCCACGACGCACATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCAGGAAACGGACTGGCTaGAGTCTGACGCGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVARKRTG*SLTRAQ
Trigger: CTGGGCACGCGTCAGACTGCAGCCAGTCCGTTTCCT...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCCCCTGCACTGGCGAATaGCAGACCAGAGCCGGCGGA +
Preference number: 2 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSPCTGE*QTRAGG
Trigger: TCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGG...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCGGAGGCGGGGCACTCTaGCTGCTTCTCGTGACCTTG +
Preference number: 2 (lower is better)
Translates to: RPGPSALGCPRARHRSGSGGGAL*LLLVTL
Trigger: CAAGGTCACGAGAAGCAGCCAGAGTGCCCCGCCTCC...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CAA 90 bp GCTGCCTCACTGAGGATGGCCCGTATGGTGGCCAAGGGCTGTGGCTaGACAGCAGTGGTAAACGCTGGGCAGACCTGGCCCCTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: AASLRMARMVAKGCG*TAVVNAGQTWPLCP
Trigger: AGGGCAGAGGGGCCAGGTCTGCCCAGCGTTTACCACTGCTGTCAAGCCACAGCCCTTGGCCACCATACGGGCCATCCTCAGTGAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCTGGCCAAGGCACACGTaGCCATCAGGTATCCTGGCT +
Preference number: 2 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGWPRHT*PSGILA
Trigger: AGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCA...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp TCCTGCCCTCACCCACCTGGATCTGATGCGGCACTAGGACCACTGGGACTGCTCGCCACATCTGGTCCGTaGCAGATCCCTGCACTGGCG +
Preference number: 2 (lower is better)
Translates to: SCPHPPGSDAALGPLGLLATSGP*QIPALA
Trigger: CGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGC...GAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCTGGGACTGCTCACCCTaGCTGGGCTTTCAAGGGAAT +
Preference number: 2 (lower is better)
Translates to: RPGPSALGCPRARHRSGSWDCSP*LGFQGN
Trigger: ATTCCCTTGAAAGCCCAGGCAGGGTGAGCAGTCCCA...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCTCTGGCAAAGCCATGTaGGTCGTGGGAACTTTAACA +
Preference number: 2 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVASGKAM*VVGTLT
Trigger: TGTTAAAGTTCCCACGACGCACATGGCTTTGCCAGA...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCCTCAGAGTCTCCGTCTaGAACACTTTCCACTTAAGG +
Preference number: 2 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVALRVSV*NTFHLR
Trigger: CCTTAAGTGGAAAGTGTTCCAGACGGAGACTCTGAG...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATCTCAGCAGCCTCCCGTaGCCAAGGCACACGTGGCCA +
Preference number: 2 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANLSSLP*PRHTWP
Trigger: TGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCTGGACTGGGTGTCCTTaGACTATGGGGCTGCATAGA +
Preference number: 2 (lower is better)
Translates to: RPGPSALGCPRARHRSGSWTGCP*TMGLHR
Trigger: TCTATGCAGCCCCATAGTCCAAGGACACCCAGTCCA...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCGGCCATCAGGTATCCTaGCTACTGGGACTAAGGATA +
Preference number: 2 (lower is better)
Translates to: RPGPSALGCPRARHRSGSGHQVS*LLGLRI
Trigger: TATCCTTAGTCCCAGTAGCCAGGATACCTGATGGCC...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATGGAGGCGGGGCACTCTaGCTGCTTCTCGTGACCTTG +
Preference number: 2 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANGGGAL*LLLVTL
Trigger: CAAGGTCACGAGAAGCAGCCAGAGTGCCCCGCCTCC...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp TCCTGCCCTCACCCACCTGGATCTGATGCGGCACTAGGACCACTGGGACTGCTCATGAGGGGGCACAGGTaGAGAAATGTACCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: SCPHPPGSDAALGPLGLLMRGHR*RNVPSG
Trigger: GCCTGAGGGTACATTTCTCCACCTGTGCCCCCTCAT...GAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR TCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGAGCTCTGTGGGAGAGTaGGGCCACCACCCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: KCTLRPSPTRANITLGAGSSVGE*GHHPAQ
Trigger: CTGGGCTGGGTGGTGGCCTCACTCTCCCACAGAGCT...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATTCCGTGCCAGATCCCTaGACTGGCGAATGGCAGACC +
Preference number: 2 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANSVPDP*TGEWQT
Trigger: GGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGA...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCCAGTACCAGGATGGCTaGCTAAAGAAAGGAAACGGA +
Preference number: 2 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCQYQDG*LKKGNG
Trigger: TCCGTTTCCTTTCTTTAGCCAGCCATCCTGGTACTG...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCGCCATTCGCCACATCTaGTCCGTGCCAGATCCCTGC +
Preference number: 2 (lower is better)
Translates to: LWGCIETRMEATTSSSWPAIRHI*SVPDPC
Trigger: GCAGGGATCTGGCACGGACCAGATGTGGCGAATGGC...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CAA 90 bp AAGACACCGGTCTGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTaGCAGCGGGTTCCACTCTGGTGGGTGGAGGGTGGGAAGAGCATG +
Preference number: 2 (lower is better)
Translates to: KTPVWVLKQELRLGI*QRVPLWWVEGGKSM
Trigger: CATGCTCTTCCCACCCTCCACCCACCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCAGACCGGTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGTCCGTGCCAGATCCCTaGACTGGCGAATGGCAGACC +
Preference number: 2 (lower is better)
Translates to: WVLKQELRLGILQRVPLWSVPDP*TGEWQT
Trigger: GGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGA...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCCAGCCACCGCGCTGTaGTGCCATTCGCCACATCTG +
Preference number: 2 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLPATAL*CHSPHL
Trigger: CAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGG...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGCTTCCCCACCTGGCGTaGGCAGTTGCAGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: WVLKQELRLGILQRVPLWLPHLA*AVAAAE
Trigger: TTCAGCAGCTGCAACTGCGCACGCCAGGTGGGGAAG...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGACGACATCATCCTCTTaGCCCCTGGAGGCACGGGCG +
Preference number: 2 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLTTSSS*PLEARA
Trigger: CGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGT...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR TCA 90 bp GTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTGCGTCGTGGGAGGACTGGCTGCAGTCTaGCGCGTGCCCAGTACAAGG +
Preference number: 2 (lower is better)
Translates to: VKGRSLNRVSGKAMCVVGGLAAV*RVPSTR
Trigger: CCTTGTACTGGGCACGCGTCAGACTGCAGCCAGTCC...TCCCACGACGCACATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR TCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCAGGACTGGCTGCAGTCTaGCGCGTGCCCAGTACAAGG +
Preference number: 2 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSGLAAV*RVPSTR
Trigger: CCTTGTACTGGGCACGCGTCAGACTGCAGCCAGTCC...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACGGCCATCAGGTATCCTaGCTACTGGGACTAAGGATA +
Preference number: 2 (lower is better)
Translates to: SGPHLPEQISLSELGHSHGHQVS*LLGLRI
Trigger: TATCCTTAGTCCCAGTAGCCAGGATACCTGATGGCC...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGGCCAGATCCCTGCACTaGCGAATGGCAGACCAGAGC +
Preference number: 2 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLARSLH*RMADQS
Trigger: GCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGC...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp GTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTGCGTCGTGGGAAGGAAACGGACTGGCTaGAGTCTGACGCGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: VKGRSLNRVSGKAMCVVGRKRTG*SLTRAQ
Trigger: CTGGGCACGCGTCAGACTGCAGCCAGTCCGTTTCCT...TCCCACGACGCACATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATGCCACCGCGCTGTGCTaGCATTCGCCACATCTGGTC +
Preference number: 2 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYATALC*HSPHLV
Trigger: GACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGC...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp TCCTGCCCTCACCCACCTGGATCTGATGCGGCACTAGGACCACTGGGACTGCTCATTAAACAGAGTTTCTaGCAAAGCCATGTGCGTCGT +
Preference number: 2 (lower is better)
Translates to: SCPHPPGSDAALGPLGLLIKQSF*QSHVRR
Trigger: ACGACGCACATGGCTTTGCCAGAAACTCTGTTTAAT...GAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR TCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCGGGACTAAGGATAAGTaGAGAGGTGAAAGGCCGATC +
Preference number: 2 (lower is better)
Translates to: LWGCIETRMEATTSSSWPGTKDK*RGERPI
Trigger: GATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCC...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCACTGCAGTCTGACGCGTaGCCAGTACAAGGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSLQSDA*PVQGVW
Trigger: CCAGACACCTTGTACTGGGCACGCGTCAGACTGCAG...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGTGTCCCTGGGACGTATaGTGCCTTCCCTTACTAAAC +
Preference number: 2 (lower is better)
Translates to: KCTLRPSPTRANITLGAGCPWDV*CLPLLN
Trigger: GTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACA...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATGGCGGGTCTCGTTCGTaGACTAGTCTTGAGTGGAGC +
Preference number: 2 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYGGSRS*TSLEWS
Trigger: GCTCCACTCAAGACTAGTCCACGAACGAGACCCGCC...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCCAATATAGAAATCTaGCTGCAGAGGCCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: KCTLRPSPTRANITLGAGPNIEI*LQRPVC
Trigger: GCACACTGGCCTCTGCAGCCAGATTTCTATATTGGG...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGCATCCTCTTGGCCCCTaGAGGCACGGGCGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLHPLGP*RHGRLQ
Trigger: CTGGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATG...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGGGTGTCCTTGGACTATaGGGCTGCATAGAAACGAGA +
Preference number: 2 (lower is better)
Translates to: WVLKQELRLGILQRVPLWGVLGL*GCIETR
Trigger: TCTCGTTTCTATGCAGCCCCATAGTCCAAGGACACC...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR TCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGAGGGTGGGAAGAGCATaGCTTCCTATTTCAGTACGT +
Preference number: 2 (lower is better)
Translates to: WVLKQELRLGILQRVPLWRVGRA*LPISVR
Trigger: ACGTACTGAAATAGGAAGTCATGCTCTTCCCACCCT...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp GCGGGTCTCGTTCGTGGACTAGTCTTGAGTGGAGCTAATTTTCAAAGTGAGGTTAGAAAGGAAACGGACTaGCTGCAGTCTGACGCGTGC +
Preference number: 2 (lower is better)
Translates to: AGLVRGLVLSGANFQSEVRKETD*LQSDAC
Trigger: GCACGCGTCAGACTGCAGCCAGTCCGTTTCCTTTCT...AACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGCTCAGCAGCCTCCCGTaGCCAAGGCACACGTGGCCA +
Preference number: 2 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLLSSLP*PRHTWP
Trigger: TGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTCATCCTCTTGGCCCCTaGAGGCACGGGCGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFHPLGP*RHGRLQ
Trigger: CTGGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATG...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATTGGACTGGGTGTCCTTaGACTATGGGGCTGCATAGA +
Preference number: 2 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYWTGCP*TMGLHR
Trigger: TCTATGCAGCCCCATAGTCCAAGGACACCCAGTCCA...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR TCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATGGGACTAAGGATAAGTaGAGAGGTGAAAGGCCGATC +
Preference number: 2 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYGTKDK*RGERPI
Trigger: GATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCC...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR GCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGCTGCAGTCTGACGCGTaGCCAGTACAAGGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLLQSDA*PVQGVW
Trigger: CCAGACACCTTGTACTGGGCACGCGTCAGACTGCAG...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGCCAGTAGCCTATGTGTaGGCAGATCCACGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLPVAYV*ADPRCL
Trigger: GAGGCAGCGTGGATCTGCCCACACATAGGCTACTGG...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGAGAAAGGAAACGGACTaGCTGCAGTCTGACGCGTGC +
Preference number: 2 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLRKETD*LQSDAC
Trigger: GCACGCGTCAGACTGCAGCCAGTCCGTTTCCTTTCT...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTTATCACTCTCGGAGCTaGGCCACAGCCACAAACCGC +
Preference number: 2 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFYHSRS*ATATNR
Trigger: GCGGTTTGTGGCTGTGGCCCAGCTCCGAGAGTGATA...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATATTAAACAGAGTTTCTaGCAAAGCCATGTGCGTCGT +
Preference number: 2 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYIKQSF*QSHVRR
Trigger: ACGACGCACATGGCTTTGCCAGAAACTCTGTTTAAT...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGCTCAGAGTCTCCGTCTaGAACACTTTCCACTTAAGG +
Preference number: 2 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMLRVSV*NTFHLR
Trigger: CCTTAAGTGGAAAGTGTTCCAGACGGAGACTCTGAG...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CAA 90 bp AGAGTCTCCGTCTGGAACACTTTCCACTTAAGGCTTTTTATAAGTTaGACTCCAGCAGTGACAGGTATGTGTTGTTTTAAATCCACTAGC +
Preference number: 2 (lower is better)
Translates to: RVSVWNTFHLRLFIS*TPAVTGMCCFKSTS
Trigger: GCTAGTGGATTTAAAACAACACATACCTGTCACTGCTGGAGTCAAACTTATAAAAAGCCTTAAGTGGAAAGTGTTCCAGACGGAGACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp CACATCTGGTCCGTGCCAGATCCCTGCACTGGCGAATaGCAGACCAGAGCCGGCGGAGGCGGGGCACTCTGG +
Preference number: 3 (lower is better)
Translates to: HIWSVPDPCTGE*QTRAGGGGALW
Trigger: CCAGAGTGCCCCGCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp CATTCGCCACATCTGGTCCGTGCCAGATCCCTGCACTaGCGAATGGCAGACCAGAGCCGGCGGAGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: HSPHLVRARSLH*RMADQSRRRRG
Trigger: GCCCCGCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR TCA 72 bp CTCCGCAGGGGCCTCCTGCCCTCACCCACCTGGATCTaGTGCGGCACTAGGACCACTGGGACTGCTCACCCT +
Preference number: 3 (lower is better)
Translates to: LRRGLLPSPTWI*CGTRTTGTAHP
Trigger: AGGGTGAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGAGGCCCCTGCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp GCTGCCATTCGCCACATCTGGTCCGTGCCAGATCCCTaGACTGGCGAATGGCAGACCAGAGCCGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: AAIRHIWSVPDP*TGEWQTRAGGG
Trigger: GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp AGAGGCCAGTGTGCAGACCCAGCCACCGCGCTGTGCTaGCATTCGCCACATCTGGTCCGTGCCAGATCCCTG +
Preference number: 3 (lower is better)
Translates to: RGQCADPATALC*HSPHLVRARSL
Trigger: CAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACACTGGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp TGCAGAGGCCAGTGTGCAGACCCAGCCACCGCGCTGTaGTGCCATTCGCCACATCTGGTCCGTGCCAGATCC +
Preference number: 3 (lower is better)
Translates to: CRGQCADPATAL*CHSPHLVRARS
Trigger: GGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACACTGGCCTCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp CAGCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTaGCCAAGGCACACGTGGCCATCAGGTATCCTGGCT +
Preference number: 3 (lower is better)
Translates to: QPSHVANLSSLP*PRHTWPSGILA
Trigger: AGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp ACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTaGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAG +
Preference number: 3 (lower is better)
Translates to: TQPPRCAAIRHI*SVPDPCTGEWQ
Trigger: CTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp GGCCAAGGGCTGTGGCTTGACAGCAGTGGTAAACGCTaGGCAGACCTGGCCCCTCTGCCCTGGGTTGCCCTA +
Preference number: 3 (lower is better)
Translates to: GQGLWLDSSGKR*ADLAPLPWVAL
Trigger: TAGGGCAACCCAGGGCAGAGGGGCCAGGTCTGCCCAGCGTTTACCACTGCTGTCAAGCCACAGCCCTTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CAA 90 bp TCCTGCCCTCACCCACCTGGATCTGATGCGGCACTAGGACCACTGGGACTGCTCCACGACATCATCCTCTaGGCCCCTGGAGGCACGGGC +
Preference number: 3 (lower is better)
Translates to: SCPHPPGSDAALGPLGLLHDIIL*APGGTG
Trigger: GCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTG...GAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp CACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTaGCAGATCCCTGCACTGGCGAATGGCAGACCAGAG +
Preference number: 3 (lower is better)
Translates to: HRAVLPFATSGP*QIPALANGRPE
Trigger: CTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp ACAGCCTCTTCGGGACCAGAGCTTGGCGGAAGCCTATaGGGGGCTGCCTCACTGAGGATGGCCCGTATGGTG +
Preference number: 3 (lower is better)
Translates to: TASSGPELGGSL*GAASLRMARMV
Trigger: CACCATACGGGCCATCCTCAGTGAGGCAGCCCCCCATAGGCTTCCGCCAAGCTCTGGTCCCGAAGAGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp TGCGGCACTAGGACCACTGGGACTGCTCACCCTGCCTaGGCTTTCAAGGGAATCCTGATCCTGTCCACCCAG +
Preference number: 3 (lower is better)
Translates to: CGTRTTGTAHPA*AFKGILILSTQ
Trigger: CTGGGTGGACAGGATCAGGATTCCCTTGAAAGCCCAGGCAGGGTGAGCAGTCCCAGTGGTCCTAGTGCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp CTCACTGAGGATGGCCCGTATGGTGGCCAAGGGCTGTaGCTTGACAGCAGTGGTAAACGCTGGGCAGACCTG +
Preference number: 3 (lower is better)
Translates to: LTEDGPYGGQGL*LDSSGKRWADL
Trigger: CAGGTCTGCCCAGCGTTTACCACTGCTGTCAAGCCACAGCCCTTGGCCACCATACGGGCCATCCTCAGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CAA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCACGACATCATCCTCTaGGCCCCTGGAGGCACGGGC +
Preference number: 3 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLHDIIL*APGGTG
Trigger: GCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTG...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp CCAGGATGGCTGGCTAAAGAAAGGAAACGGACTGGCTaGAGTCTGACGCGTGCCCAGTACAAGGTGTCTGGC +
Preference number: 3 (lower is better)
Translates to: PGWLAKERKRTG*SLTRAQYKVSG
Trigger: GCCAGACACCTTGTACTGGGCACGCGTCAGACTGCAGCCAGTCCGTTTCCTTTCTTTAGCCAGCCATCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp GCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTaGGCCACAGCCACAAACCGCTGTTCTAGACAGATC +
Preference number: 3 (lower is better)
Translates to: ALTYQSKYHSRS*ATATNRCSRQI
Trigger: GATCTGTCTAGAACAGCGGTTTGTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CAA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCAGGCTTTTTATAAGTTaGACTCCAGCAGTGACAGGT +
Preference number: 3 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGRLFIS*TPAVTG
Trigger: ACCTGTCACTGCTGGAGTCAAACTTATAAAAAGCCT...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp TCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTaGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: SRGQGTRGHQVS*LLGLRISEEVK
Trigger: TTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CCA 72 bp AACCGCTGTTCTAGACAGATCCAAACCCACTGTCCCTaGGACGTATGCTGCCTTCCCTTACTAAACTTGCTA +
Preference number: 3 (lower is better)
Translates to: NRCSRQIQTHCP*DVCCLPLLNLL
Trigger: TAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTGTCTAGAACAGCGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp GGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTaGGTCGTGGGAACTTTAACACCAGCTTCTACTCCT +
Preference number: 3 (lower is better)
Translates to: GRSLNRVSGKAM*VVGTLTPASTP
Trigger: AGGAGTAGAAGCTGGTGTTAAAGTTCCCACGACGCACATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp AGACAGATCCAAACCCACTGTCCCTGGGACGTATGCTaGCTTCCCTTACTAAACTTGCTATATGGTAGATGT +
Preference number: 3 (lower is better)
Translates to: RQIQTHCPWDVC*LPLLNLLYGRC
Trigger: ACATCTACCATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR GCA 72 bp TCTAGACAGATCCAAACCCACTGTCCCTGGGACGTATaGTGCCTTCCCTTACTAAACTTGCTATATGGTAGA +
Preference number: 3 (lower is better)
Translates to: SRQIQTHCPWDV*CLPLLNLLYGR
Trigger: TCTACCATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTGTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR-3UTR CAA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGCTTCCCTTACTAAACTaGCTATATGGTAGATGTGGA +
Preference number: 3 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLLPLLN*LYGRCG
Trigger: TCCACATCTACCATATAGCAAGTTTAGTAAGGGAAG...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCTCCGCAGGGGCCTCCTaGCCTCACCCACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVASAGAS*PHPPGS
Trigger: AGATCCAGGTGGGTGAGGGCAGGAGGCCCCTGCGGA...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCAGCTCTGTGGGAGAGTaGGGCCACCACCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGSSVGE*GHHPAQ
Trigger: CTGGGCTGGGTGGTGGCCTCACTCTCCCACAGAGCT...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCTGGGCAGATCCACGCTaGCTCCGCAGGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSWADPR*LRRGLL
Trigger: CAGGAGGCCCCTGCGGAGGCAGCGTGGATCTGCCCA...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCGTCAGGAAGCGAACATaGGCTTCGCTCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVAVRKRT*ASLPQA
Trigger: GGCCTGGGGGAGCGAAGCCCATGTTCGCTTCCTGAC...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCCAGCGTCTCCCATaGTGCTCGGCGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVSQRLP*CSAAAE
Trigger: CTCCGCCGCCGCCGAGCACCATGGGAGACGCTGGGA...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTAAGCGAGGCGGCAGGCTaGGCGCTTTGCTGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVSEAAG*ALCCAR
Trigger: GCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCT...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCCAGCGGGTTCCACTCTaGTGGGTGGAGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGQRVPL*WVEGGK
Trigger: CTTCCCACCCTCCACCCACCAGAGTGGAACCCGCTG...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCGGACTGGCTGCAGTCTaGCGCGTGCCCAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSGLAAV*RVPSTR
Trigger: CCTTGTACTGGGCACGCGTCAGACTGCAGCCAGTCC...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCCTGCAGTCTGACGCGTaGCCAGTACAAGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVALQSDA*PVQGVW
Trigger: CCAGACACCTTGTACTGGGCACGCGTCAGACTGCAG...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCTCCGTGCCAGATCCCTaGACTGGCGAATGGCAGACC +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGSVPDP*TGEWQT
Trigger: GGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGA...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCCCAGCCACCGCGCTGTaGTGCCATTCGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: RPGPSALGCPRARHRSGSPATAL*CHSPHL
Trigger: CAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGG...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATGGGCAGATCCACGCTaGCTCCGCAGGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVWADPR*LRRGLL
Trigger: CAGGAGGCCCCTGCGGAGGCAGCGTGGATCTGCCCA...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCGCTCCTTCCCATGGCTaGCTCCACGCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCAPSHG*LHAAGR
Trigger: TCTGCCTGCTGCGTGGAGGCAGCCATGGGAAGGAGC...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCCCCTCCCCGATGCGCTaGCAGGAGCGCCCCACTTTC +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGPSPMR*QERPTF
Trigger: GAAAGTGGGGCGCTCCTGCCAGCGCATCGGGGAGGG...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCCAGCGGGTTCCACTCTaGTGGGTGGAGGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RPGPSALGCPRARHRSGSQRVPL*WVEGGK
Trigger: CTTCCCACCCTCCACCCACCAGAGTGGAACCCGCTG...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCAGCAGTGGTAAACGCTaGGCAGACCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGSSGKR*ADLAPL
Trigger: CAGAGGGGCCAGGTCTGCCCAGCGTTTACCACTGCT...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCAATGTGCAGTCGTGCTaGTCGGGGAGGCGATGTAAC +
Preference number: 4 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVANVQSC*SGRRCN
Trigger: GTTACATCGCCTCCCCGAGCAGCACGACTGCACATT...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCGGCAGCTTCCCCAGCTaGTGCTCCCAGCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCGSFPS*CSQHFY
Trigger: GTAGAAGTGCTGGGAGCAGCAGCTGGGGAAGCTGCC...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCGCACCAGCTCCAGTTTaGTTTGGCACTGGAAGCACC +
Preference number: 4 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVAAPAPV*FGTGST
Trigger: GGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGC...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTCGTGGTGGCCATGCCTaGCCTTCAGGAGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATRGGHA*PSGAPL
Trigger: GAGGGGTGCTCCTGAAGGCCAGGCATGGCCACCACG...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACGGCTGGGCGCTTTGCTaGGCTCGCTCCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHGWALC*ARSQRL
Trigger: GAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCC...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATTCCCAGCGTCTCCCATaGTGCTCGGCGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANSQRLP*CSAAAE
Trigger: CTCCGCCGCCGCCGAGCACCATGGGAGACGCTGGGA...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCTGGCCAAGGCACACGTaGCCATCAGGTATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSWPRHT*PSGILA
Trigger: AGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCA...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTGGAGGCGGGGCACTCTaGCTGCTTCTCGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATGGGAL*LLLVTL
Trigger: CAAGGTCACGAGAAGCAGCCAGAGTGCCCCGCCTCC...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCTGGACTGGGTGTCCTTaGACTATGGGGCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVAWTGCP*TMGLHR
Trigger: TCTATGCAGCCCCATAGTCCAAGGACACCCAGTCCA...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCATGAGGGGGCACAGGTaGAGAAATGTACCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGMRGHR*RNVPSG
Trigger: GCCTGAGGGTACATTTCTCCACCTGTGCCCCCTCAT...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCCTGGCCCCTCTGCCCTaGGTTGCCCTAGAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGLAPLP*VALEQD
Trigger: GTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAG...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCGGGACTAAGGATAAGTaGAGAGGTGAAAGGCCGATC +
Preference number: 4 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVAGTKDK*RGERPI
Trigger: GATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCC...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATGCAGGCTGGGCGCTTTaGTGCGCTCGCTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANAGWAL*CARSQR
Trigger: ACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGC...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTAAGGAAACGGACTGGCTaGAGTCTGACGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVRKRTG*SLTRAQ
Trigger: CTGGGCACGCGTCAGACTGCAGCCAGTCCGTTTCCT...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTCTTCCCCACCTGGCGTaGGCAGTTGCAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATLPHLA*AVAAAE
Trigger: TTCAGCAGCTGCAACTGCGCACGCCAGGTGGGGAAG...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCTCACAGAACAGATACTaGAGGGGAACAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGSQNRY*RGTSPT
Trigger: GGTGGGGCTTGTTCCCCTGCAGTATCTGTTCTGTGA...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCAGCTCCAGTTTGGTTTaGCACTGGAAGCACCGACGT +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGSSSLV*HWKHRR
Trigger: ACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCT...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCCTGCCCTCACCCACCTGGATCTGATGCGGCACTAGGACCACTGGGACTGCTCAACAGCGTCACGTGGTaGCCATGCCTGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SCPHPPGSDAALGPLGLLNSVTW*PCLAFR
Trigger: CCTGAAGGCCAGGCATGGCCACCACGTGACGCTGTT...GAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCAGAAAGGAAACGGACTaGCTGCAGTCTGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCRKETD*LQSDAC
Trigger: GCACGCGTCAGACTGCAGCCAGTCCGTTTCCTTTCT...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTGCCAGATCCCTGCACTaGCGAATGGCAGACCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATARSLH*RMADQS
Trigger: GCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGC...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTAGCCATTCGCCACATCTaGTCCGTGCCAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVAIRHI*SVPDPC
Trigger: GCAGGGATCTGGCACGGACCAGATGTGGCGAATGGC...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCACTGCTCACCCTGCCTaGGCTTTCAAGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: RPGPSALGCPRARHRSGSTAHPA*AFKGIL
Trigger: CAGGATTCCCTTGAAAGCCCAGGCAGGGTGAGCAGT...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTTCACCCACCTGGATCTaGTGCGGCACTAGGACCACT +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATSPTWI*CGTRTT
Trigger: AGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGA...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATTCCGCAGGGGCCTCCTaGCCTCACCCACCTGGATCT +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANSAGAS*PHPPGS
Trigger: AGATCCAGGTGGGTGAGGGCAGGAGGCCCCTGCGGA...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACGCTCCTTCCCATGGCTaGCTCCACGCAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHAPSHG*LHAAGR
Trigger: TCTGCCTGCTGCGTGGAGGCAGCCATGGGAAGGAGC...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTAGGCGGGTCTCGTTCGTaGACTAGTCTTGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVGGSRS*TSLEWS
Trigger: GCTCCACTCAAGACTAGTCCACGAACGAGACCCGCC...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCCAAACCCACTGTCCCTaGGACGTATGCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGQTHCP*DVCCLP
Trigger: GGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATATCACTCTCGGAGCTaGGCCACAGCCACAAACCGC +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVYHSRS*ATATNR
Trigger: GCGGTTTGTGGCTGTGGCCCAGCTCCGAGAGTGATA...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCCTGCCCTCACCCACCTGGATCTGATGCGGCACTAGGACCACTGGGACTGCTCCCAGTAGCCTATGTGTaGGCAGATCCACGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SCPHPPGSDAALGPLGLLPVAYV*ADPRCL
Trigger: GAGGCAGCGTGGATCTGCCCACACATAGGCTACTGG...GAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CAA 72 bp CATAGAAACGAGAATGGAGGCCACGACATCATCCTCTaGGCCCCTGGAGGCACGGGCGGCTCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: HRNENGGHDIIL*APGGTGGSSWK
Trigger: CTTCCAGCTGGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGGGCTGGGCGCTTTGCTaGGCTCGCTCCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGGWALC*ARSQRL
Trigger: GAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCC...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCGATCCCAATTCCTGCTaGACCAGCTCCAGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: RPGPSALGCPRARHRSGSDPNSC*TSSSLV
Trigger: AACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATC...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCGATCCCAATTCCTGCTaGACCAGCTCCAGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSDPNSC*TSSSLV
Trigger: AACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATC...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACGGCAGCTTCCCCAGCTaGTGCTCCCAGCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHGSFPS*CSQHFY
Trigger: GTAGAAGTGCTGGGAGCAGCAGCTGGGGAAGCTGCC...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCGCACCAGCTCCAGTTTaGTTTGGCACTGGAAGCACC +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGAPAPV*FGTGST
Trigger: GGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGC...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCCGTGGTGGCCATGCCTaGCCTTCAGGAGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPRGGHA*PSGAPL
Trigger: GAGGGGTGCTCCTGAAGGCCAGGCATGGCCACCACG...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCCCCAATATAGAAATCTaGCTGCAGAGGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSPNIEI*LQRPVC
Trigger: GCACACTGGCCTCTGCAGCCAGATTTCTATATTGGG...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTAGTGATTTCCTAACATaGGGCAACCAGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATSDFLT*GNQAHP
Trigger: GGGGTGGGCCTGGTTGCCCCATGTTAGGAAATCACT...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCAGTGATTTCCTAACATaGGGCAACCAGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGSDFLT*GNQAHP
Trigger: GGGGTGGGCCTGGTTGCCCCATGTTAGGAAATCACT...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTAACTGCTCACCCTGCCTaGGCTTTCAAGGGAATCCTG +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVTAHPA*AFKGIL
Trigger: CAGGATTCCCTTGAAAGCCCAGGCAGGGTGAGCAGT...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCCACGATCCCAATTCCTaGTGCACCAGCTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGHDPNS*CTSSSL
Trigger: CAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTG...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTCACGATCCCAATTCCTaGTGCACCAGCTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATHDPNS*CTSSSL
Trigger: CAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTG...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCTCTGGCAAAGCCATGTaGGTCGTGGGAACTTTAACA +
Preference number: 4 (lower is better)
Translates to: RPGPSALGCPRARHRSGSSGKAM*VVGTLT
Trigger: TGTTAAAGTTCCCACGACGCACATGGCTTTGCCAGA...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCGCCACCGCGCTGTGCTaGCATTCGCCACATCTGGTC +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPATALC*HSPHLV
Trigger: GACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGC...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCCCCTCTGCCCTGGGTTaGCCTAGAGCAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPPSALG*PRARHR
Trigger: CCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGG...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCGCTGGGACTAAGAGTTaGCGTGGTTATCGAGGTATT +
Preference number: 4 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSAGTKS*RGYRGI
Trigger: AATACCTCGATAACCACGCCAACTCTTAGTCCCAGC...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCCTGCCCTCACCCACCTGGATCTGATGCGGCACTAGGACCACTGGGACTGCTCAGCTCCAGTTTGGTTTaGCACTGGAAGCACCGACGT +
Preference number: 4 (lower is better)
Translates to: SCPHPPGSDAALGPLGLLSSSLV*HWKHRR
Trigger: ACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCT...GAGCAGTCCCAGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGAGGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACAAGAACAGCGTCACGTaGTGGCCATGCCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHKNSVT*WPCLAF
Trigger: GAAGGCCAGGCATGGCCACCACGTGACGCTGTTCTT...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCCTGCACTGGCGAATaGCAGACCAGAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGPCTGE*QTRAGG
Trigger: TCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGG...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACTATCACTCTCGGAGCTaGGCCACAGCCACAAACCGC +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHYHSRS*ATATNR
Trigger: GCGGTTTGTGGCTGTGGCCCAGCTCCGAGAGTGATA...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACCCAGTAGCCTATGTGTaGGCAGATCCACGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHPVAYV*ADPRCL
Trigger: GAGGCAGCGTGGATCTGCCCACACATAGGCTACTGG...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTTGGCGGAAGCCTATaGGGGGCTGCCTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPLGGSL*GAASLR
Trigger: CCTCAGTGAGGCAGCCCCCCATAGGCTTCCGCCAAG...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATTCGAATGTGCAGTCGTaGTGCTCGGGGAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANSNVQS*CSGRRC
Trigger: ACATCGCCTCCCCGAGCAGCACGACTGCACATTCGA...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATCCATGTGGTCGAATGTaGAGTCGTGCTGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANPCGRM*SRAARG
Trigger: TCCCCGAGCAGCACGACTGCACATTCGACCACATGG...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGGTCACGTGGTGGCCATaGCTGGCCTTCAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGVTWWP*LAFRST
Trigger: GGTGCTCCTGAAGGCCAGGCATGGCCACCACGTGAC...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCTCCGTGCCAGATCCCTaGACTGGCGAATGGCAGACC +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPSVPDP*TGEWQT
Trigger: GGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGA...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCCTCTGCCCTGGGTTaGCCTAGAGCAAGACACCGG +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGPSALG*PRARHR
Trigger: CCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGG...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTCAGCAGCCTCCCGTaGCCAAGGCACACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLLSSLP*PRHTWP
Trigger: TGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCACATCCTCTTGGCCCCTaGAGGCACGGGCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSHPLGP*RHGRLQ
Trigger: CTGGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATG...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CAA 72 bp GTCTGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTaGCAGCGGGTTCCACTCTGGTGGGTGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VWVLKQELRLGI*QRVPLWWVEGG
Trigger: CCCACCCTCCACCCACCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCTCCCAGCACTTCTACTaGTTCTTGTTGGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCSQHFY*FLLAMK
Trigger: TTTCATAGCCAACAAGAATCAGTAGAAGTGCTGGGA...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCTCCCAGCACTTCTACTaGTTCTTGTTGGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: RPGPSALGCPRARHRSGSSQHFY*FLLAMK
Trigger: TTTCATAGCCAACAAGAATCAGTAGAAGTGCTGGGA...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCAGGGTGGGAAGAGCATaGCTTCCTATTTCAGTACGT +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGRVGRA*LPISVR
Trigger: ACGTACTGAAATAGGAAGTCATGCTCTTCCCACCCT...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGGTCACGTGGTGGCCATaGCTGGCCTTCAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLVTWWP*LAFRST
Trigger: GGTGCTCCTGAAGGCCAGGCATGGCCACCACGTGAC...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTCAGTACCAGGATGGCTaGCTAAAGAAAGGAAACGGA +
Preference number: 4 (lower is better)
Translates to: LSSLPWPRHTWPSGILATQYQDG*LKKGNG
Trigger: TCCGTTTCCTTTCTTTAGCCAGCCATCCTGGTACTG...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGAGCAGTGGTAAACGCTaGGCAGACCTGGCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: WVLKQELRLGILQRVPLWSSGKR*ADLAPL
Trigger: CAGAGGGGCCAGGTCTGCCCAGCGTTTACCACTGCT...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGAGGAAACGGACTGGCTaGAGTCTGACGCGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLRKRTG*SLTRAQ
Trigger: CTGGGCACGCGTCAGACTGCAGCCAGTCCGTTTCCT...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCAGCCACATCTGGTCCGTaGCAGATCCCTGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSATSGP*QIPALA
Trigger: CGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGC...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCTGTTGTTGTCACTGGTaGTCTCTTCGGAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCCCCHW*SLRKTN
Trigger: ATTTGTTTTCCGAAGAGACCACCAGTGACAACAACA...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCACGGCCACGGCCCATGTaGTCGAATGTGCAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSRPRPM*SNVQSC
Trigger: GCACGACTGCACATTCGACCACATGGGCCGTGGCCG...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTGCGTCGTGGGACGGCCACGGCCCATGTaGTCGAATGTGCAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VKGRSLNRVSGKAMCVVGRPRPM*SNVQSC
Trigger: GCACGACTGCACATTCGACCACATGGGCCGTGGCCG...TCCCACGACGCACATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGAAGAACAGCGTCACGTaGTGGCCATGCCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGKNSVT*WPCLAF
Trigger: GAAGGCCAGGCATGGCCACCACGTGACGCTGTTCTT...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATTGGACTGGGTGTCCTTaGACTATGGGGCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANWTGCP*TMGLHR
Trigger: TCTATGCAGCCCCATAGTCCAAGGACACCCAGTCCA...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGCAAACCCACTGTCCCTaGGACGTATGCTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: WVLKQELRLGILQRVPLWQTHCP*DVCCLP
Trigger: GGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCACTGGCCCCTCTGCCCTaGGTTGCCCTAGAGCAAGAC +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSLAPLP*VALEQD
Trigger: GTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAG...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCAGTCAGGAAGCGAACATaGGCTTCGCTCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSVRKRT*ASLPQA
Trigger: GGCCTGGGGGAGCGAAGCCCATGTTCGCTTCCTGAC...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCCTCCTCTTTACTCGGTaGAGTTACATTCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGLLFTR*SYIQFC
Trigger: ACAGAACTGAATGTAACTTCACCGAGTAAAGAGGAG...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATCCAGCCACCGCGCTGTaGTGCCATTCGCCACATCTG +
Preference number: 4 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYPATAL*CHSPHL
Trigger: CAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGG...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp TGGTCCGTGCCAGATCCCTGCACTGGCGAATGGCAGACCAGAGCCGGCGGAGGCAAAAACATTTGCAGTTaGAGGTGTTCAGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: WSVPDPCTGEWQTRAGGGKNICS*RCSAVN
Trigger: ATTAACAGCTGAACACCTGCAACTGCAAATGTTTTT...GCCTCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGCACGGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACGCTGGGACTAAGAGTTaGCGTGGTTATCGAGGTATT +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHAGTKS*RGYRGI
Trigger: AATACCTCGATAACCACGCCAACTCTTAGTCCCAGC...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCAGTTTGGTTTGGCACTaGAAGCACCGACGTCGACTC +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPSLVWH*KHRRRL
Trigger: GAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACT...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACCTCAGAGTCTCCGTCTaGAACACTTTCCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: SGPHLPEQISLSELGHSHLRVSV*NTFHLR
Trigger: CCTTAAGTGGAAAGTGTTCCAGACGGAGACTCTGAG...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCAGCCAGATCCCTGCACTaGCGAATGGCAGACCAGAGC +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSARSLH*RMADQS
Trigger: GCTCTGGTCTGCCATTCGCCAGTGCAGGGATCTGGC...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GCGGGTCTCGTTCGTGGACTAGTCTTGAGTGGAGCTAATTTTCAAAGTGAGGTTACGACATCATCCTCTTaGCCCCTGGAGGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: AGLVRGLVLSGANFQSEVTTSSS*PLEARA
Trigger: CGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGT...AACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGATGAGGGGGCACAGGTaGAGAAATGTACCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGMRGHR*RNVPSG
Trigger: GCCTGAGGGTACATTTCTCCACCTGTGCCCCCTCAT...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATAGGGTGGGAAGAGCATaGCTTCCTATTTCAGTACGT +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANRVGRA*LPISVR
Trigger: ACGTACTGAAATAGGAAGTCATGCTCTTCCCACCCT...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTCCAGGCCGGTCAGCTaGAGGCGGGCCGCACCACTC +
Preference number: 4 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLSRPVS*RRAAPL
Trigger: GAGTGGTGCGGCCCGCCTCCAGCTGACCGGCCTGGA...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287218.9
CDS-3UTR CCA 90 bp ACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCAACCACCATCTCAGCAGCCTCCCGTaGCCAAGGCACACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TMASRHLSNQPEINFNHHLSSLP*PRHTWP
Trigger: TGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG...ATGGTGGTTGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATGCCATTCGCCACATCTaGTCCGTGCCAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYAIRHI*SVPDPC
Trigger: GCAGGGATCTGGCACGGACCAGATGTGGCGAATGGC...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp CAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACT +
Preference number: 4 (lower is better)
Translates to: QSQQPPVAKAHVAIRYPGFGKQI*LAVTCT
Trigger: AGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAA...GCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGTGGCCGTTTTACTGGTaGAGCCTCATTCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGWPFYW*SLILRL
Trigger: CAGTCTGAGAATGAGGCTTCACCAGTAAAACGGCCA...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGAGCTCTGTGGGAGAGTaGGGCCACCACCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMSSVGE*GHHPAQ
Trigger: CTGGGCTGGGTGGTGGCCTCACTCTCCCACAGAGCT...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGGCAGGCTGGGCGCTTTaGTGCGCTCGCTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLAGWAL*CARSQR
Trigger: ACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGC...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCAACCACCATGCCACATCTGGTCCGTaGCAGATCCCTGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: TMASRHLSNQPEINFNHHATSGP*QIPALA
Trigger: CGCCAGTGCAGGGATCTGGCACGGACCAGATGTGGC...ATGGTGGTTGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGCCCTGGGACGTATGCTaGCTTCCCTTACTAAACTTG +
Preference number: 4 (lower is better)
Translates to: WVLKQELRLGILQRVPLWPWDVC*LPLLNL
Trigger: CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGG...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTAAGGATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAACCCTCCCCGATGCGCTaGCAGGAGCGCCCCACTTTC +
Preference number: 4 (lower is better)
Translates to: LRISEEVKGRSLNRVSGKPSPMR*QERPTF
Trigger: GAAAGTGGGGCGCTCCTGCCAGCGCATCGGGGAGGG...TTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTATCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGCCCAATATAGAAATCTaGCTGCAGAGGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: WVLKQELRLGILQRVPLWPNIEI*LQRPVC
Trigger: GCACACTGGCCTCTGCAGCCAGATTTCTATATTGGG...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTAAGGATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAACATCCTCTTGGCCCCTaGAGGCACGGGCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LRISEEVKGRSLNRVSGKHPLGP*RHGRLQ
Trigger: CTGGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATG...TTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTATCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCAGGTGGCCAAGGGCTGTaGCTTGACAGCAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSGGQGL*LDSSGK
Trigger: TTTACCACTGCTGTCAAGCCACAGCCCTTGGCCACC...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGTGGCCGTTTTACTGGTaGAGCCTCATTCTCAGACTG +
Preference number: 4 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLWPFYW*SLILRL
Trigger: CAGTCTGAGAATGAGGCTTCACCAGTAAAACGGCCA...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCACATGAGCTGTGTCTGTaGATGGCCCACACTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSHELCL*MAHTPL
Trigger: AAGAGGAGTGTGGGCCATGCACAGACACAGCTCATG...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287218.9
CDS-3UTR GCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATAATGTGCAGTCGTGCTaGTCGGGGAGGCGATGTAAC +
Preference number: 4 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYNVQSC*SGRRCN
Trigger: GTTACATCGCCTCCCCGAGCAGCACGACTGCACATT...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTAGAAAACAAATCTGATTaGCTGTTACTTGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: TWPISAASRGQGTRGHQVENKSD*LLLVLG
Trigger: TCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTC...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCTCAGAGTCTCCGTCTaGAACACTTTCCACTTAAGG +
Preference number: 4 (lower is better)
Translates to: KCTLRPSPTRANITLGAGLRVSV*NTFHLR
Trigger: CCTTAAGTGGAAAGTGTTCCAGACGGAGACTCTGAG...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp GAGGGGGCACAGGTGGAGAAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATTAAACAGAGTTTCTaGCAAAGCCATGTGCGTCGT +
Preference number: 4 (lower is better)
Translates to: EGAQVEKCTLRPSPTRANIKQSF*QSHVRR
Trigger: ACGACGCACATGGCTTTGCCAGAAACTCTGTTTAAT...ATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTTCTCCACCTGTGCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCAGGACTGGCTGCAGTCTaGCGCGTGCCCAGTACAAGG +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASGLAAV*RVPSTR
Trigger: CCTTGTACTGGGCACGCGTCAGACTGCAGCCAGTCC...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGGCCACCGCGCTGTGCTaGCATTCGCCACATCTGGTC +
Preference number: 4 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLATALC*HSPHLV
Trigger: GACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGC...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAGATCCAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGGCTGTTACTTGTACTTaGAGCGGAATCATCGTCTGG +
Preference number: 4 (lower is better)
Translates to: QIQTHCPWDVCCLPLLNLAVTCT*SGIIVW
Trigger: CCAGACGATGATTCCGCTCCAAGTACAAGTAACAGC...CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTGGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTAAGGATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGGAGGCGGGGCACTCTaGCTGCTTCTCGTGACCTTG +
Preference number: 4 (lower is better)
Translates to: LRISEEVKGRSLNRVSGKGGGAL*LLLVTL
Trigger: CAAGGTCACGAGAAGCAGCCAGAGTGCCCCGCCTCC...TTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTATCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTCCCTGCACTGGCGAATaGCAGACCAGAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFPCTGE*QTRAGG
Trigger: TCCGCCGGCTCTGGTCTGCCATTCGCCAGTGCAGGG...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCACTTGGCGGAAGCCTATaGGGGGCTGCCTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASLGGSL*GAASLR
Trigger: CCTCAGTGAGGCAGCCCCCCATAGGCTTCCGCCAAG...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTCACCCACCTGGATCTaGTGCGGCACTAGGACCACT +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMSPTWI*CGTRTT
Trigger: AGTGGTCCTAGTGCCGCATCAGATCCAGGTGGGTGA...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGCCATGTGGTCGAATGTaGAGTCGTGCTGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMPCGRM*SRAARG
Trigger: TCCCCGAGCAGCACGACTGCACATTCGACCACATGG...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATCCCTGGGACGTATGCTaGCTTCCCTTACTAAACTTG +
Preference number: 4 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYPWDVC*LPLLNL
Trigger: CAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGG...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp GCGGGTCTCGTTCGTGGACTAGTCTTGAGTGGAGCTAATTTTCAAAGTGAGGTTTGTCCCTGGGACGTATaGTGCCTTCCCTTACTAAAC +
Preference number: 4 (lower is better)
Translates to: AGLVRGLVLSGANFQSEVCPWDV*CLPLLN
Trigger: GTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACA...AACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCACTTCCCCACCTGGCGTaGGCAGTTGCAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASLPHLA*AVAAAE
Trigger: TTCAGCAGCTGCAACTGCGCACGCCAGGTGGGGAAG...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCAACCACCATTGGGACTGCTCACCCTaGCTGGGCTTTCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: TMASRHLSNQPEINFNHHWDCSP*LGFQGN
Trigger: ATTCCCTTGAAAGCCCAGGCAGGGTGAGCAGTCCCA...ATGGTGGTTGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCAAACAGCGTCACGTGGTaGCCATGCCTGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASNSVTW*PCLAFR
Trigger: CCTGAAGGCCAGGCATGGCCACCACGTGACGCTGTT...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATGGCCATCAGGTATCCTaGCTACTGGGACTAAGGATA +
Preference number: 4 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYGHQVS*LLGLRI
Trigger: TATCCTTAGTCCCAGTAGCCAGGATACCTGATGGCC...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGGGCGGGTCTCGTTCGTaGACTAGTCTTGAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMGGSRS*TSLEWS
Trigger: GCTCCACTCAAGACTAGTCCACGAACGAGACCCGCC...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACT +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPFGKQI*LAVTCT
Trigger: AGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAA...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCACTGCAGTCTGACGCGTaGCCAGTACAAGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASLQSDA*PVQGVW
Trigger: CCAGACACCTTGTACTGGGCACGCGTCAGACTGCAG...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTGGGACTGCTCACCCTaGCTGGGCTTTCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMWDCSP*LGFQGN
Trigger: ATTCCCTTGAAAGCCCAGGCAGGGTGAGCAGTCCCA...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGAGAAAGGAAACGGACTaGCTGCAGTCTGACGCGTGC +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMRKETD*LQSDAC
Trigger: GCACGCGTCAGACTGCAGCCAGTCCGTTTCCTTTCT...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATCAGTACCAGGATGGCTaGCTAAAGAAAGGAAACGGA +
Preference number: 4 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYQYQDG*LKKGNG
Trigger: TCCGTTTCCTTTCTTTAGCCAGCCATCCTGGTACTG...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCATGGCCAAGGCACACGTaGCCATCAGGTATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASWPRHT*PSGILA
Trigger: AGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCA...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTTCGAATGTGCAGTCGTaGTGCTCGGGGAGGCGATGT +
Preference number: 4 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFSNVQS*CSGRRC
Trigger: ACATCGCCTCCCCGAGCAGCACGACTGCACATTCGA...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCAAAAACATTTGCAGTTaGAGGTGTTCAGCTGTTAAT +
Preference number: 4 (lower is better)
Translates to: LWGCIETRMEATTSSSWPKNICS*RCSAVN
Trigger: ATTAACAGCTGAACACCTGCAACTGCAAATGTTTTT...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGTCACAGAACAGATACTaGAGGGGAACAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMSQNRY*RGTSPT
Trigger: GGTGGGGCTTGTTCCCCTGCAGTATCTGTTCTGTGA...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCAGGTGGCCAAGGGCTGTaGCTTGACAGCAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASGGQGL*LDSSGK
Trigger: TTTACCACTGCTGTCAAGCCACAGCCCTTGGCCACC...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGGGTGTCCTTGGACTATaGGGCTGCATAGAAACGAGA +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMGVLGL*GCIETR
Trigger: TCTCGTTTCTATGCAGCCCCATAGTCCAAGGACACC...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ACAATGGCTAGCAGGCACCTTAGTAACCAGCCAGAAATCAATTTCAACCACCATAGCAAGACACCGGTCTaGGTCCTGAAGCAAGAATTA +
Preference number: 4 (lower is better)
Translates to: TMASRHLSNQPEINFNHHSKTPV*VLKQEL
Trigger: TAATTCTTGCTTCAGGACCCAGACCGGTGTCTTGCT...ATGGTGGTTGAAATTGATTTCTGGCTGGTTACTAAGGTGCCTGCTAGCCATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTGGCTGACTTTGTCCTAAATAAGGCTAACATTAGTGAACTAAGAACAGCGTCAGGCCATCAGGTATCCTaGCTACTGGGACTAAGGATA +
Preference number: 4 (lower is better)
Translates to: LADFVLNKANISELRTASGHQVS*LLGLRI
Trigger: TATCCTTAGTCCCAGTAGCCAGGATACCTGATGGCC...TGACGCTGTTCTTAGTTCACTAATGTTAGCCTTATTTAGGACAAAGTCAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp CTAAGGATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGGTGTCCTTGGACTATaGGGCTGCATAGAAACGAGA +
Preference number: 4 (lower is better)
Translates to: LRISEEVKGRSLNRVSGKGVLGL*GCIETR
Trigger: TCTCGTTTCTATGCAGCCCCATAGTCCAAGGACACC...TTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTATCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGAGCAAGACACCGGTCTaGGTCCTGAAGCAAGAATTA +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMSKTPV*VLKQEL
Trigger: TAATTCTTGCTTCAGGACCCAGACCGGTGTCTTGCT...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CAA 72 bp TGTGTAGAAAAGGCGGGTCTCGTTCGTGGACTAGTCTaGAGTGGAGCTAATTTTCAAAGTGAGGTTACTGTT +
Preference number: 4 (lower is better)
Translates to: CVEKAGLVRGLV*SGANFQSEVTV
Trigger: AACAGTAACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGCCTTTTCTACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR GCA 90 bp CTAAGGATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAATCTGGCAAAGCCATGTaGGTCGTGGGAACTTTAACA +
Preference number: 4 (lower is better)
Translates to: LRISEEVKGRSLNRVSGKSGKAM*VVGTLT
Trigger: TGTTAAAGTTCCCACGACGCACATGGCTTTGCCAGA...TTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTATCCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTAGCTGTGTCTGTGCATaGCCCACACTCCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFSCVCA*PTLLFT
Trigger: AGTAAAGAGGAGTGTGGGCCATGCACAGACACAGCT...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287218.9
CDS-3UTR TCA 90 bp CTAAGGATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAACTCATTCTCAGACTGTaGATACTCCTCTTTACTCGG +
Preference number: 4 (lower is better)
Translates to: LRISEEVKGRSLNRVSGKLILRL*ILLFTR
Trigger: CCGAGTAAAGAGGAGTATTCACAGTCTGAGAATGAG...TTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTATCCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373391.6
CDS-3UTR CCA 90 bp GCGGGTCTCGTTCGTGGACTAGTCTTGAGTGGAGCTAATTTTCAAAGTGAGGTTGAAAACAAATCTGATTaGCTGTTACTTGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: AGLVRGLVLSGANFQSEVENKSD*LLLVLG
Trigger: TCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTC...AACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTCTCATTCTCAGACTGTaGATCTGTACCACAGGATCT +
Preference number: 4 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFLILRL*ICTTGS
Trigger: AGATCCTGTGGTACAGATTCACAGTCTGAGAATGAG...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287218.9
CDS-3UTR TCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTCTCCTCTTTACTCGGTaGAGTTACATTCAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFLLFTR*SYIQFC
Trigger: ACAGAACTGAATGTAACTTCACCGAGTAAAGAGGAG...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR TCA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGATCTTTTTGTTGGTGTaGTTAATGAGACATGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMIFLLV*LMRHEL
Trigger: CAGCTCATGTCTCATTAATCACACCAACAAAAAGAT...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287218.9
CDS-3UTR CCA 90 bp ATTTGCAGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTGTTGTTGTCACTGGTaGTCTCTTCGGAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: ICSCRCSAVNLQTELNHLCCCHW*SLRKTN
Trigger: ATTTGTTTTCCGAAGAGACCACCAGTGACAACAACA...CAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACTGCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CCA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTATTAAACAGAGTTTCTaGCAAAGCCATGTGCGTCGT +
Preference number: 4 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFIKQSF*QSHVRR
Trigger: ACGACGCACATGGCTTTGCCAGAAACTCTGTTTAAT...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
3UTR CAA 72 bp GTCTGGAACACTTTCCACTTAAGGCTTTTTATAAGTTaGACTCCAGCAGTGACAGGTATGTGTTGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: VWNTFHLRLFIS*TPAVTGMCCFK
Trigger: TTTAAAACAACACATACCTGTCACTGCTGGAGTCAAACTTATAAAAAGCCTTAAGTGGAAAGTGTTCCAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS GCA 90 bp GCAGGCTGGGCGCTTTGCTGCGCTCGCTCCCAGCGTCTCCCATGGTaGTCGGCGGCGGCGGAGCTCGGCGGCGGCAGCGGTGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: AGWALCCARSQRLPW*SAAAELGGGSGGGG
Trigger: GCCGCCGCCACCGCTGCCGCCGCCGAGCTCCGCCGCCGCCGAGCACCATGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS CCA 90 bp GCGGCAGGCTGGGCGCTTTGCTGCGCTCGCTCCCAGCGTCTCCCATaGTGCTCGGCGGCGGCGGAGCTCGGCGGCGGCAGCGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: AAGWALCCARSQRLP*CSAAAELGGGSGGG
Trigger: GCCGCCACCGCTGCCGCCGCCGAGCTCCGCCGCCGCCGAGCACCATGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS GCA 90 bp CCCAGAAGCCGCAGGGACAGCGAGGCGGCAGGCTGGGCGCTTTGCTaGGCTCGCTCCCAGCGTCTCCCATGGTGCTCGGCGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PRSRRDSEAAGWALC*ARSQRLPWCSAAAE
Trigger: CTCCGCCGCCGCCGAGCACCATGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCTGTCCCTGCGGCTTCTGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS GCA 90 bp ACCCCCAGAAGCCGCAGGGACAGCGAGGCGGCAGGCTGGGCGCTTTaGTGCGCTCGCTCCCAGCGTCTCCCATGGTGCTCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: TPRSRRDSEAAGWAL*CARSQRLPWCSAAA
Trigger: CGCCGCCGCCGAGCACCATGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCTGTCCCTGCGGCTTCTGGGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS CCA 90 bp TCTTGCTGGACCCCCAGAAGCCGCAGGGACAGCGAGGCGGCAGGCTaGGCGCTTTGCTGCGCTCGCTCCCAGCGTCTCCCATGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SCWTPRSRRDSEAAG*ALCCARSQRLPWCS
Trigger: CGAGCACCATGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCTGTCCCTGCGGCTTCTGGGGGTCCAGCAAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCGGCAGGCTGGGCGCTTaGCTGCGCTCGCTCCCAGCG +
Preference number: 5 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCGRLGA*LRSLPA
Trigger: CGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCC...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTAGGCAGGCTGGGCGCTTaGCTGCGCTCGCTCCCAGCG +
Preference number: 5 (lower is better)
Translates to: TWPISAASRGQGTRGHQVGRLGA*LRSLPA
Trigger: CGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCC...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCGCCAAGGGCTGTGGCTaGACAGCAGTGGTAAACGCT +
Preference number: 5 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSAKGCG*TAVVNA
Trigger: AGCGTTTACCACTGCTGTCAAGCCACAGCCCTTGGC...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp AGACCTGGCCCCTCTGCCCTGGGTTGCCCTAGAGCAAGACACCGGTCTGGGTCCCAGAGATTCATAGTCTaGCTGGACCCCCAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: RPGPSALGCPRARHRSGSQRFIV*LDPQKP
Trigger: CGGCTTCTGGGGGTCCAGCAAGACTATGAATCTCTG...GGACCCAGACCGGTGTCTTGCTCTAGGGCAACCCAGGGCAGAGGGGCCAGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCGGCTGTTACTTGTACTaGGAGCGGAATCATCGTCTG +
Preference number: 5 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVAGCYLY*ERNHRL
Trigger: CAGACGATGATTCCGCTCCAAGTACAAGTAACAGCC...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GTGTGCAGACCCAGCCACCGCGCTGTGCTGCCATTCGCCACATCTGGTCCGTGCTGCACCAGCTCCAGTTaGGTTTGGCACTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: VCRPSHRAVLPFATSGPCCTSSS*VWHWKH
Trigger: GTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCA...GCACGGACCAGATGTGGCGAATGGCAGCACAGCGCGGTGGCTGGGTCTGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCTGCACCAGCTCCAGTTaGGTTTGGCACTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSCTSSS*VWHWKH
Trigger: GTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCA...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS TCA 90 bp GCTGGCAGGAGCGCCCCACTTTCCGGTCCAGCTTCACCATTTTCATaGTGGCTTCCTCCCGGCCACGGCCCATGTGGTCGAATGTGCAGT +
Preference number: 5 (lower is better)
Translates to: AGRSAPLSGPASPFS*WLPPGHGPCGRMCS
Trigger: ACTGCACATTCGACCACATGGGCCGTGGCCGGGAGGAAGCCATCATGAAAATGGTGAAGCTGGACCGGAAAGTGGGGCGCTCCTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373391.6
ENST00000440482.2
ENST00000463847.1
CDS-3UTR CAA 90 bp GCCCAGCCACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCGTGGTTATCGAGGTATaGTTGTTGTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: AQPRGQSQQPPVAKAHVAVVIEV*LLSLVV
Trigger: GACCACCAGTGACAACAACAATACCTCGATAACCAC...GGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGTGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTACAGCTCCAGTTTGGTTaGGCACTGGAAGCACCGACG +
Preference number: 5 (lower is better)
Translates to: TWPISAASRGQGTRGHQVQLQFG*ALEAPT
Trigger: CGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTG...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp CTATGGGGCTGCATAGAAACGAGAATGGAGGCCACGACATCATCCTCTTGGCCCCACGACATCATCCTCTaGGCCCCTGGAGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: LWGCIETRMEATTSSSWPHDIIL*APGGTG
Trigger: GCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTG...GGGCCAAGAGGATGATGTCGTGGCCTCCATTCTCGTTTCTATGCAGCCCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACACCTGGCGTGCGCAGTaGCAGCTGCTGAAATCCTCT +
Preference number: 5 (lower is better)
Translates to: SGPHLPEQISLSELGHSHTWRAQ*QLLKSS
Trigger: AGAGGATTTCAGCAGCTGCAACTGCGCACGCCAGGT...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS GCA 90 bp TCTCTCTCCAGAGAAACACCGCAGCGACACGATCCCAATTCCTGCTaGACCAGCTCCAGTTTGGTTTGGCACTGGAAGCACCGACGTCGA +
Preference number: 5 (lower is better)
Translates to: SLSRETPQRHDPNSC*TSSSLVWHWKHRRR
Trigger: TCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTCGCTGCGGTGTTTCTCTGGAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373389.5
CDS CCA 90 bp AGCTTCACCATTTTCATGATGGCTTCCTCCCGGCCACGGCCCATGTaGTCGAATGTGCAGTCGTGCTGCTCGGGGAGGCGATGTAACATA +
Preference number: 5 (lower is better)
Translates to: SFTIFMMASSRPRPM*SNVQSCCSGRRCNI
Trigger: TATGTTACATCGCCTCCCCGAGCAGCACGACTGCACATTCGACCACATGGGCCGTGGCCGGGAGGAAGCCATCATGAAAATGGTGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373391.6
ENST00000440482.2
ENST00000463847.1
CDS GCA 90 bp ACATCTCTCTCCAGAGAAACACCGCAGCGACACGATCCCAATTCCTaGTGCACCAGCTCCAGTTTGGTTTGGCACTGGAAGCACCGACGT +
Preference number: 5 (lower is better)
Translates to: TSLSRETPQRHDPNS*CTSSSLVWHWKHRR
Trigger: ACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTCGCTGCGGTGTTTCTCTGGAGAGAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373389.5
CDS-3UTR CAA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTACTGATTGGCTGTTACTaGTACTTGGAGCGGAATCAT +
Preference number: 5 (lower is better)
Translates to: TWPISAASRGQGTRGHQVLIGCY*YLERNH
Trigger: ATGATTCCGCTCCAAGTACAAGTAACAGCCAATCAG...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GAGAATGGAGGCCACGACATCATCCTCTTGGCCCCTGGAGGCACGGGCGGCTCCTGTTCAGCTGTTAATTaGCAGACAGAGTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: ENGGHDIILLAPGGTGGSCSAVN*QTELNH
Trigger: ATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACA...GGAGCCGCCCGTGCCTCCAGGGGCCAAGAGGATGATGTCGTGGCCTCCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS GCA 90 bp AGAATGTCCGAGTGGCAACGTGGTCAGGGGGCATCAGACTATAAATaGCACACATCTCTCTCCAGAGAAACACCGCAGCGACACGATCCC +
Preference number: 5 (lower is better)
Translates to: RMSEWQRGQGASDYK*HTSLSRETPQRHDP
Trigger: GGGATCGTGTCGCTGCGGTGTTTCTCTGGAGAGAGATGTGTGGCATTTATAGTCTGATGCCCCCTGACCACGTTGCCACTCGGACATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373389.5
CDS CCA 90 bp CAGCGACACGATCCCAATTCCTGCTGCACCAGCTCCAGTTTGGTTTaGCACTGGAAGCACCGACGTCGACTCTTCTGTTTAGATCGACTG +
Preference number: 5 (lower is better)
Translates to: QRHDPNSCCTSSSLV*HWKHRRRLFCLDRL
Trigger: CAGTCGATCTAAACAGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000440482.2
CDS-3UTR CAA 90 bp TGGGTCCTGAAGCAAGAATTAAGGCTGGGGATTTTGCAGCGGGTTCCACTCTGGCAGAGATTCATAGTCTaGCTGGACCCCCAGAAGCCG +
Preference number: 5 (lower is better)
Translates to: WVLKQELRLGILQRVPLWQRFIV*LDPQKP
Trigger: CGGCTTCTGGGGGTCCAGCAAGACTATGAATCTCTG...CCAGAGTGGAACCCGCTGCAAAATCCCCAGCCTTAATTCTTGCTTCAGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTAGGCTTTTTATAAGTTaGACTCCAGCAGTGACAGGT +
Preference number: 5 (lower is better)
Translates to: LSSLPWPRHTWPSGILATRLFIS*TPAVTG
Trigger: ACCTGTCACTGCTGGAGTCAAACTTATAAAAAGCCT...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS CCA 90 bp CACGATCCCAATTCCTGCTGCACCAGCTCCAGTTTGGTTTGGCACTaGAAGCACCGACGTCGACTCTTCTGTTTAGATCGACTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: HDPNSCCTSSSLVWH*KHRRRLFCLDRLVS
Trigger: GGAAACCAGTCGATCTAAACAGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000440482.2
CDS-3UTR CAA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACGTTATCGAGGTATTGTaGTTGTCACTGGTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: SGPHLPEQISLSELGHSHVIEVL*LSLVVS
Trigger: AGAGACCACCAGTGACAACAACAATACCTCGATAAC...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp ACGTGGCCAATCTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTACTTCCCTTACTAAACTaGCTATATGGTAGATGTGGA +
Preference number: 5 (lower is better)
Translates to: TWPISAASRGQGTRGHQVLPLLN*LYGRCG
Trigger: TCCACATCTACCATATAGCAAGTTTAGTAAGGGAAG...TACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAGATTGGCCACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp CTCAGCAGCCTCCCGTGGCCAAGGCACACGTGGCCATCAGGTATCCTGGCTACTCTTCCCTTACTAAACTaGCTATATGGTAGATGTGGA +
Preference number: 5 (lower is better)
Translates to: LSSLPWPRHTWPSGILATLPLLN*LYGRCG
Trigger: TCCACATCTACCATATAGCAAGTTTAGTAAGGGAAG...AGTAGCCAGGATACCTGATGGCCACGTGTGCCTTGGCCACGGGAGGCTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCAACCTGGCGTGCGCAGTaGCAGCTGCTGAAATCCTCT +
Preference number: 5 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSTWRAQ*QLLKSS
Trigger: AGAGGATTTCAGCAGCTGCAACTGCGCACGCCAGGT...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATCAGCTCCAGTTTGGTTaGGCACTGGAAGCACCGACG +
Preference number: 5 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYQLQFG*ALEAPT
Trigger: CGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTG...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp TCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCCACAGCCACAGGCTTTTTATAAGTTaGACTCCAGCAGTGACAGGT +
Preference number: 5 (lower is better)
Translates to: SGPHLPEQISLSELGHSHRLFIS*TPAVTG
Trigger: ACCTGTCACTGCTGGAGTCAAACTTATAAAAAGCCT...GTGGCTGTGGCCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS CCA 90 bp TACATTCAGTTCTGTCGGAAGCGGCTGCTGGCTGGGACTAAGAGTTaGCGTGGTTATCGAGGTATTGTTGTTGTCACTGGTGGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: YIQFCRKRLLAGTKS*RGYRGIVVVTGGLF
Trigger: GAAGAGACCACCAGTGACAACAACAATACCTCGATAACCACGCCAACTCTTAGTCCCAGCCAGCAGCCGCTTCCGACAGAACTGAATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS-3UTR CAA 90 bp AAATGTACCCTCAGGCCCTCACCTACCAGAGCAAATATCACTCTCGGAGCTGGGCTGATTGGCTGTTACTaGTACTTGGAGCGGAATCAT +
Preference number: 5 (lower is better)
Translates to: KCTLRPSPTRANITLGAGLIGCY*YLERNH
Trigger: ATGATTCCGCTCCAAGTACAAGTAACAGCCAATCAG...CCCAGCTCCGAGAGTGATATTTGCTCTGGTAGGTGAGGGCCTGAGGGTACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS CCA 90 bp TCTTTACTCGGTGAAGTTACATTCAGTTCTGTCGGAAGCGGCTGCTaGCTGGGACTAAGAGTTGGCGTGGTTATCGAGGTATTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SLLGEVTFSSVGSGC*LGLRVGVVIEVLLL
Trigger: CAACAACAATACCTCGATAACCACGCCAACTCTTAGTCCCAGCCAGCAGCCGCTTCCGACAGAACTGAATGTAACTTCACCGAGTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS-3UTR CAA 90 bp CAAACCCACTGTCCCTGGGACGTATGCTGCCTTCCCTTACTAAACTTGCTATATATCGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: QTHCPWDVCCLPLLNLLYIEVLL*SLVVSS
Trigger: CGAAGAGACCACCAGTGACAACAACAATACCTCGAT...ATATAGCAAGTTTAGTAAGGGAAGGCAGCATACGTCCCAGGGACAGTGGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GCGGGTCTCGTTCGTGGACTAGTCTTGAGTGGAGCTAATTTTCAAAGTGAGGTTATCGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: AGLVRGLVLSGANFQSEVIEVLL*SLVVSS
Trigger: CGAAGAGACCACCAGTGACAACAACAATACCTCGAT...AACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GCGGGTCTCGTTCGTGGACTAGTCTTGAGTGGAGCTAATTTTCAAAGTGAGGTTGTGGTTATCGAGGTATaGTTGTTGTCACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: AGLVRGLVLSGANFQSEVVVIEV*LLSLVV
Trigger: GACCACCAGTGACAACAACAATACCTCGATAACCAC...AACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS TCA 90 bp CGAGGTATTGTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACTTGGAGCGGAATCATCGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RGIVVVTGGLFGKQI*LAVTCTWSGIIVWL
Trigger: CAGCCAGACGATGATTCCGCTCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000474522.5
CDS-3UTR CAA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTGCCAAGGGCTGTGGCTaGACAGCAGTGGTAAACGCT +
Preference number: 5 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFAKGCG*TAVVNA
Trigger: AGCGTTTACCACTGCTGTCAAGCCACAGCCCTTGGC...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp GCGGGTCTCGTTCGTGGACTAGTCTTGAGTGGAGCTAATTTTCAAAGTGAGGTTGTTCGTGGACTAGTCTaGAGTGGAGCTAATTTTCAA +
Preference number: 5 (lower is better)
Translates to: AGLVRGLVLSGANFQSEVVRGLV*SGANFQ
Trigger: TTGAAAATTAGCTCCACTCAAGACTAGTCCACGAAC...AACCTCACTTTGAAAATTAGCTCCACTCAAGACTAGTCCACGAACGAGACCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp CAGGTATCCTGGCTACTGGGACTAAGGATAAGTGAAGAGGTGAAAGGCCGATCATGTTCAGCTGTTAATTaGCAGACAGAGTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: QVSWLLGLRISEEVKGRSCSAVN*QTELNH
Trigger: ATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACA...TGATCGGCCTTTCACCTCTTCACTTATCCTTAGTCCCAGTAGCCAGGATACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS CCA 90 bp GTATTGTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTaGCTGTTACTTGTACTTGGAGCGGAATCATCGTCTGGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: VLLLSLVVSSENKSD*LLLVLGAESSSGCF
Trigger: GAAACAGCCAGACGATGATTCCGCTCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000474522.5
CDS-3UTR CAA 90 bp ATAAGTGAAGAGGTGAAAGGCCGATCATTAAACAGAGTTTCTGGCAAAGCCATGGTTATCGAGGTATTGTaGTTGTCACTGGTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: ISEEVKGRSLNRVSGKAMVIEVL*LSLVVS
Trigger: AGAGACCACCAGTGACAACAACAATACCTCGATAAC...CATGGCTTTGCCAGAAACTCTGTTTAATGATCGGCCTTTCACCTCTTCACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS-3UTR CAA 90 bp AGTTGCAGGTGTTCAGCTGTTAATTTGCAGACAGAGTTGAACCATTTGTTGTTTGTTCGTGGACTAGTCTaGAGTGGAGCTAATTTTCAA +
Preference number: 5 (lower is better)
Translates to: SCRCSAVNLQTELNHLLFVRGLV*SGANFQ
Trigger: TTGAAAATTAGCTCCACTCAAGACTAGTCCACGAAC...AAACAACAAATGGTTCAACTCTGTCTGCAAATTAACAGCTGAACACCTGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS GCA 72 bp GCGCTTTGCTGCGCTCGCTCCCAGCGTCTCCCATGGTaGTCGGCGGCGGCGGAGCTCGGCGGCGGCAGCGGT +
Preference number: 6 (lower is better)
Translates to: ALCCARSQRLPW*SAAAELGGGSG
Trigger: ACCGCTGCCGCCGCCGAGCTCCGCCGCCGCCGAGCACCATGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS GCA 72 bp CGCAGGGACAGCGAGGCGGCAGGCTGGGCGCTTTGCTaGGCTCGCTCCCAGCGTCTCCCATGGTGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: RRDSEAAGWALC*ARSQRLPWCSA
Trigger: CGCCGAGCACCATGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCTGTCCCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287218.9
ENST00000373391.6
CDS CCA 72 bp ACCCCCAGAAGCCGCAGGGACAGCGAGGCGGCAGGCTaGGCGCTTTGCTGCGCTCGCTCCCAGCGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: TPRSRRDSEAAG*ALCCARSQRLP
Trigger: TGGGAGACGCTGGGAGCGAGCGCAGCAAAGCGCCCAGCCTGCCGCCTCGCTGTCCCTGCGGCTTCTGGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287218.9
ENST00000373391.6
ENST00000474522.5
CDS GCA 72 bp TGGCTTCCTCCCGGCCACGGCCCATGTGGTCGAATGTaGAGTCGTGCTGCTCGGGGAGGCGATGTAACATAC +
Preference number: 6 (lower is better)
Translates to: WLPPGHGPCGRM*SRAARGGDVTY
Trigger: GTATGTTACATCGCCTCCCCGAGCAGCACGACTGCACATTCGACCACATGGGCCGTGGCCGGGAGGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373391.6
ENST00000440482.2
ENST00000463847.1
CDS CCA 72 bp AGTGAACTAAGAACAGCGTCACGTGGTGGCCATGCCTaGCCTTCAGGAGCACCCCTCCCCGATGCGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SELRTASRGGHA*PSGAPLPDALA
Trigger: TGCCAGCGCATCGGGGAGGGGTGCTCCTGAAGGCCAGGCATGGCCACCACGTGACGCTGTTCTTAGTTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373391.6
ENST00000440482.2
ENST00000463847.1
CDS CCA 72 bp ATTTTCATGATGGCTTCCTCCCGGCCACGGCCCATGTaGTCGAATGTGCAGTCGTGCTGCTCGGGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: IFMMASSRPRPM*SNVQSCCSGRR
Trigger: TCGCCTCCCCGAGCAGCACGACTGCACATTCGACCACATGGGCCGTGGCCGGGAGGAAGCCATCATGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373391.6
ENST00000440482.2
ENST00000463847.1
CDS GCA 72 bp TCCCGGCCACGGCCCATGTGGTCGAATGTGCAGTCGTaGTGCTCGGGGAGGCGATGTAACATACAGAACACA +
Preference number: 6 (lower is better)
Translates to: SRPRPMWSNVQS*CSGRRCNIQNT
Trigger: TGTGTTCTGTATGTTACATCGCCTCCCCGAGCAGCACGACTGCACATTCGACCACATGGGCCGTGGCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373391.6
ENST00000440482.2
ENST00000463847.1
CDS GCA 72 bp AGAGAAACACCGCAGCGACACGATCCCAATTCCTGCTaGACCAGCTCCAGTTTGGTTTGGCACTGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: RETPQRHDPNSC*TSSSLVWHWKH
Trigger: GTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTCGCTGCGGTGTTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373389.5
CDS GCA 72 bp TCCAGAGAAACACCGCAGCGACACGATCCCAATTCCTaGTGCACCAGCTCCAGTTTGGTTTGGCACTGGAAG +
Preference number: 6 (lower is better)
Translates to: SRETPQRHDPNS*CTSSSLVWHWK
Trigger: CTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTCGCTGCGGTGTTTCTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373389.5
CDS CCA 72 bp GACACGATCCCAATTCCTGCTGCACCAGCTCCAGTTTaGTTTGGCACTGGAAGCACCGACGTCGACTCTTCT +
Preference number: 6 (lower is better)
Translates to: DTIPIPAAPAPV*FGTGSTDVDSS
Trigger: AGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000440482.2
CDS CAA 90 bp GCAGCGACACGATCCCAATTCCTGCTGCACCAGCTCCAGTTTGGTTaGGCACTGGAAGCACCGACGTCGACTCTTCTGTTTAGATCGACT +
Preference number: 6 (lower is better)
Translates to: AATRSQFLLHQLQFG*ALEAPTSTLLFRST
Trigger: AGTCGATCTAAACAGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000440482.2
CDS CAA 90 bp ACACCGCAGCGACACGATCCCAATTCCTGCTGCACCAGCTCCAGTTaGGTTTGGCACTGGAAGCACCGACGTCGACTCTTCTGTTTAGAT +
Preference number: 6 (lower is better)
Translates to: TPQRHDPNSCCTSSS*VWHWKHRRRLFCLD
Trigger: ATCTAAACAGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCGTGTCGCTGCGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373389.5
CDS CAA 72 bp CGATCCCAATTCCTGCTGCACCAGCTCCAGTTTGGTTaGGCACTGGAAGCACCGACGTCGACTCTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: RSQFLLHQLQFG*ALEAPTSTLLF
Trigger: AAACAGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000440482.2
CDS TCA 72 bp TGTGTCTGTGCATGGCCCACACTCCTCTTTACTCGGTaGAGTTACATTCAGTTCTGTCGGAAGCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: CVCAWPTLLFTR*SYIQFCRKRLL
Trigger: CAGCAGCCGCTTCCGACAGAACTGAATGTAACTTCACCGAGTAAAGAGGAGTGTGGGCCATGCACAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000474522.5
CDS CCA 72 bp GGTGAAGTTACATTCAGTTCTGTCGGAAGCGGCTGCTaGCTGGGACTAAGAGTTGGCGTGGTTATCGAGGTA +
Preference number: 6 (lower is better)
Translates to: GEVTFSSVGSGC*LGLRVGVVIEV
Trigger: TACCTCGATAACCACGCCAACTCTTAGTCCCAGCCAGCAGCCGCTTCCGACAGAACTGAATGTAACTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS CCA 72 bp GATCCCAATTCCTGCTGCACCAGCTCCAGTTTGGTTTaGCACTGGAAGCACCGACGTCGACTCTTCTGTTTA +
Preference number: 6 (lower is better)
Translates to: DPNSCCTSSSLV*HWKHRRRLFCL
Trigger: TAAACAGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATTGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000440482.2
CDS CCA 72 bp AATTCCTGCTGCACCAGCTCCAGTTTGGTTTGGCACTaGAAGCACCGACGTCGACTCTTCTGTTTAGATCGA +
Preference number: 6 (lower is better)
Translates to: NSCCTSSSLVWH*KHRRRLFCLDR
Trigger: TCGATCTAAACAGAAGAGTCGACGTCGGTGCTTCCAGTGCCAAACCAAACTGGAGCTGGTGCAGCAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000440482.2
CDS CAA 90 bp GGCTGCTGGCTGGGACTAAGAGTTGGCGTGGTTATCGAGGTATTGTaGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTGGCTG +
Preference number: 6 (lower is better)
Translates to: GCWLGLRVGVVIEVL*LSLVVSSENKSDWL
Trigger: CAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCGATAACCACGCCAACTCTTAGTCCCAGCCAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS TCA 72 bp CTGGGCAACAGAGTGAGTATACTCCTCTTTACTCGGTaGAGTTACATTCAGTTCTGTCGGAAGCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LGNRVSILLFTR*SYIQFCRKRLL
Trigger: CAGCAGCCGCTTCCGACAGAACTGAATGTAACTTCACCGAGTAAAGAGGAGTATACTCACTCTGTTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469208.1
CDS CAA 90 bp TGCTGGCTGGGACTAAGAGTTGGCGTGGTTATCGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCGGAAAACAAATCTGATTGGCTGTTA +
Preference number: 6 (lower is better)
Translates to: CWLGLRVGVVIEVLL*SLVVSSENKSDWLL
Trigger: TAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCGATAACCACGCCAACTCTTAGTCCCAGCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS CAA 72 bp TGGCTGGGACTAAGAGTTGGCGTGGTTATCGAGGTATaGTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAA +
Preference number: 6 (lower is better)
Translates to: WLGLRVGVVIEV*LLSLVVSSENK
Trigger: TTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCGATAACCACGCCAACTCTTAGTCCCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS TCA 72 bp GTTGTTGTCACTGGTGGTCTCTTCGGAAAACAAATCTaGTTGGCTGTTACTTGTACTTGGAGCGGAATCATC +
Preference number: 6 (lower is better)
Translates to: VVVTGGLFGKQI*LAVTCTWSGII
Trigger: GATGATTCCGCTCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS CCA 72 bp TTGGCGTGGTTATCGAGGTATTGTTGTTGTCACTGGTaGTCTCTTCGGAAAACAAATCTGATTGGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: LAWLSRYCCCHW*SLRKTNLIGCY
Trigger: GTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCGATAACCACGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS CAA 72 bp TGGTCTCTTCGGAAAACAAATCTGATTGGCTGTTACTaGTACTTGGAGCGGAATCATCGTCTGGCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: WSLRKTNLIGCY*YLERNHRLAVS
Trigger: AGAAACAGCCAGACGATGATTCCGCTCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000474522.5
CDS CAA 72 bp GGACTAAGAGTTGGCGTGGTTATCGAGGTATTGTTGTaGTCACTGGTGGTCTCTTCGGAAAACAAATCTGAT +
Preference number: 6 (lower is better)
Translates to: GLRVGVVIEVLL*SLVVSSENKSD
Trigger: ATCAGATTTGTTTTCCGAAGAGACCACCAGTGACAACAACAATACCTCGATAACCACGCCAACTCTTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000469208.1
ENST00000474522.5
CDS CAA 72 bp CTTCGGAAAACAAATCTGATTGGCTGTTACTTGTACTaGGAGCGGAATCATCGTCTGGCTGTTTCTTTTGAA +
Preference number: 6 (lower is better)
Translates to: LRKTNLIGCYLY*ERNHRLAVSFE
Trigger: TTCAAAAGAAACAGCCAGACGATGATTCCGCTCCAAGTACAAGTAACAGCCAATCAGATTTGTTTTCCGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287218.9
ENST00000373389.5
ENST00000373391.6
ENST00000474522.5