RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFAND2B (Homo sapiens)

Ensembl gene IDs: ENSG00000158552

Ensembl transcript IDs: ENST00000289528.10, ENST00000409097.5, ENST00000409206.5, ENST00000409217.5, ENST00000409319.5, ENST00000409336.5, ENST00000409412.5, ENST00000409594.5, ENST00000422255.5, ENST00000425849.1, ENST00000436556.5, ENST00000444522.6, ENST00000448496.5, ENST00000464902.5, ENST00000468301.1, ENST00000469596.5, ENST00000475533.1, ENST00000476713.5, ENST00000486734.5, ENST00000489197.1, ENST00000621130.4

Found 704 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCC +
Preference number: 1 (lower is better)
Translates to: QGDLHITPACLCPPG*SGPPLPVYPRGVRA
Trigger: GGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR TCA 90 bp CTCCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCAGGTGAACCTCCCTCCCCAAGCCCA +
Preference number: 1 (lower is better)
Translates to: LQGAPGLLSLCTLEV*GPQSSSGEPPSPSP
Trigger: TGGGCTTGGGGAGGGAGGTTCACCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR GCA 90 bp TCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGA +
Preference number: 1 (lower is better)
Translates to: SRGSQGDLHITPACL*PPGCSGPPLPVYPR
Trigger: TCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR GCA 90 bp GCTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTGCTTG +
Preference number: 1 (lower is better)
Translates to: ACALEMAASPARLVG*PSPEQSWSSGCRCL
Trigger: CAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 90 bp GGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCA +
Preference number: 1 (lower is better)
Translates to: GPNQGTVASRSLPCS*STSKAFQRLPGRPP
Trigger: TGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CCA 90 bp CACAGCTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTG +
Preference number: 1 (lower is better)
Translates to: HSLCSGDGSKSCPAG*VPLPRAIMVQWMPV
Trigger: CACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 90 bp AAGCCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCC +
Preference number: 1 (lower is better)
Translates to: KPQLVLWRWQQVLPG*LGAPPQSNHGPVDA
Trigger: GGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 90 bp GCAAGTCCTGCCCGGCTGGTTGGGTGCCCCTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGCTTGATGCAGAAGTTTCGGCTACAG +
Preference number: 1 (lower is better)
Translates to: ASPARLVGCPSPEQS*SSGCRCLMQKFRLQ
Trigger: CTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR GCA 90 bp CGGCTGGTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAGTTTCGGCTACAGCGTTCACAGGTC +
Preference number: 1 (lower is better)
Translates to: RLVGCPSPEQSWSSG*RCLMQKFRLQRSQV
Trigger: GACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 90 bp TGCCCGGCTGGTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCAGAAGTTTCGGCTACAGCGTTCACA +
Preference number: 1 (lower is better)
Translates to: CPAGWVPLPRAIMVQ*MPVLDAEVSATAFT
Trigger: TGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 90 bp TCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: SNLCPTHQAILQSNH*RGCPGRRSGCGSAG
Trigger: CCCAGCAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 90 bp TCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACA +
Preference number: 1 (lower is better)
Translates to: SNLCPTHQAILQSNH*RGCPGRRSGCGSTT
Trigger: TGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR TCA 90 bp GATCGGGTTGTGGCTCTGCTGGGAGAGGTACAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTGCTTGTAGAAGCCACAGCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: DRVVALLGEVQEGMV*LGLGTVLVEATACA
Trigger: AGCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCCGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR GCA 90 bp GTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGGCTACAGCGTTCACAGGTCAGTTTC +
Preference number: 1 (lower is better)
Translates to: VGCPSPEQSWSSGCR*LMQKFRLQRSQVSF
Trigger: GAAACTGACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 90 bp CTTGCCCACAGCTTGCGCTCTCTTTCACAAGAGGGTAAGGTACCTTaGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCG +
Preference number: 1 (lower is better)
Translates to: LAHSLRSLSQEGKVP*NLGFGFCQGHFQGP
Trigger: CGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGAAAGAGAGCGCAAGCTGTGGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR CCA 90 bp GGTTGTGGCTCTGCTGGGAGAGGTACAGGAAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGTAGAAGCCACAGCTTGTGCTCTGGA +
Preference number: 1 (lower is better)
Translates to: GCGSAGRGTGRHGLT*AGDSACRSHSLCSG
Trigger: TCCAGAGCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR TCA 90 bp GGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCA +
Preference number: 1 (lower is better)
Translates to: GAPPQSNHGPVDAGA*CRSFGYSVHRSVSS
Trigger: TGATGAAACTGACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR GCA 90 bp GGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTCTACAAAGGGAGAAAGAAGACCAGC +
Preference number: 1 (lower is better)
Translates to: GTWGLVSARDISRAR*RASSSLYKGRKKTS
Trigger: GCTGGTCTTCTTTCTCCCTTTGTAGAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR GCA 90 bp TTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTaGCTCCAGACCAAGCCCTTGCCCACAGCTTGCGCTCTCTTTCAC +
Preference number: 1 (lower is better)
Translates to: LPAIILHCVRVVPPT*LQTKPLPTACALFH
Trigger: GTGAAAGAGAGCGCAAGCTGTGGGCAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR CCA 90 bp CTTCAGCCCAGCCTCATACCTGCTGCCGCTGGTATTCTGCCTCACTaGCTGACAGTGCTTGTGCTAAAGCTAGGTCTTCTTCCTCCTGAC +
Preference number: 1 (lower is better)
Translates to: LQPSLIPAAAGILPH*LTVLVLKLGLLPPD
Trigger: GTCAGGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACCAGCGGCAGCAGGTATGAGGCTGGGCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR GCA 90 bp TTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTT +
Preference number: 1 (lower is better)
Translates to: FVSVHPTSAQLTRPF*KAITGGAVQDGDRV
Trigger: AACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR GCA 90 bp CTTTCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCACT +
Preference number: 1 (lower is better)
Translates to: LSQEGKVPWNLGFGF*QGHFQGPLQSFILT
Trigger: AGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR GCA 90 bp CTTGGACTTCACTCTCTGTGTGTTTGTTTCTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGC +
Preference number: 1 (lower is better)
Translates to: LGLHSLCVCFCPSNL*PTHQAILQSNHWRG
Trigger: GCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTGAAGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR CCA 90 bp ATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGCCCACAGCTT +
Preference number: 1 (lower is better)
Translates to: ILRPSCQRLSCIVSE*SHLPASRPSPCPQL
Trigger: AAGCTGTGGGCAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR TCA 90 bp GGAGGGAGAAACAGTTTAAGTTGGATGATGGTAAGATCTGAAATTTaGACATCTGATCTGTGTGTGTTGGGCCTCATGGTGCTGAGCACT +
Preference number: 1 (lower is better)
Translates to: GGRNSLSWMMVRSEI*TSDLCVLGLMVLST
Trigger: AGTGCTCAGCACCATGAGGCCCAACACACACAGATCAGATGTTCAAATTTCAGATCTTACCATCATCCAACTTAAACTGTTTCTCCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR TCA 90 bp CTGAAATTTGAACATCTGATCTGTGTGTGTTGGGCCTCATGGTGCTaGGCACTGCTGAGGATTATCTCAATCTTCATAGCAACACTACAA +
Preference number: 1 (lower is better)
Translates to: LKFEHLICVCWASWC*ALLRIISIFIATLQ
Trigger: TTGTAGTGTTGCTATGAAGATTGAGATAATCCTCAGCAGTGCTCAGCACCATGAGGCCCAACACACACAGATCAGATGTTCAAATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR CCA 90 bp AGCACTGCTGAGGATTATCTCAATCTTCATAGCAACACTACAAGGTaGGTATTAGTATTGTCCCCGTTTTATAGAGGAAATGAAGGCTCC +
Preference number: 1 (lower is better)
Translates to: STAEDYLNLHSNTTR*VLVLSPFYRGNEGS
Trigger: GGAGCCTTCATTTCCTCTATAAAACGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATCCTCAGCAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: GDLHITPACLCPPGCSGPLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR GCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR TCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTGGCCAGCATCCACTaGGGGCCCAACCAGGGAACA +
Preference number: 2 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVLASIH*GPNQGT
Trigger: TGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAG...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR GCA 90 bp GCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCCTAGAGCAAAGACTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: AQAAVGRLRAAALGLEQRLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...TCTTTGCTCTAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR GCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR CCA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 2 (lower is better)
Translates to: GDLHITPACLCPPGCSGPLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409594.5
3UTR CAA 90 bp CCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGT +
Preference number: 2 (lower is better)
Translates to: PQLVLWRWQQVLPGW*GAPPQSNHGPVDAG
Trigger: ACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR GCA 90 bp TGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: WNLGFGFCQGHFQGPLQSTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...GCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR TCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: AWPASTEGPTREQLLAALCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CAA 90 bp AGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCATGCAGCTGGAGCACTAGCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: SRAWPASTEGPTREQ*LAALFHAAGALARP
Trigger: AGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR GCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR CCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCTCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR GCA 90 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: PSCQRLSCIVSEWSHLPALCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...GGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR TCA 90 bp GAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: EPGVWFLPGTFPGPAAELCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...AAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR TCA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAATGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR GCA 90 bp ATACCTGCTGCCGCTGGTATTCTGCCTCACTGGCTGACAGTGCTTGTGCTAAAGACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: IPAAAGILPHWLTVLVLKTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...CTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACCAGCGGCAGCAGGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR CCA 90 bp TGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: WNLGFGFCQGHFQGPLQSCIVSE*SHLPAS
Trigger: GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCA...GCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CCA 90 bp CTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGGGGTTGTGGCTCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: LPNSPGHSAKQSLEGLSRGLWLC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCC...CCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR TCA 90 bp CTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: LTRPFCKAITGGAVQDGDQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...ATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR GCA 90 bp GAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCCCTTGCCCACAGCTTaGGCTCTCTTTCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: EPGVWFLPGTFPGPAAELPLPTA*ALFHKR
Trigger: CCTCTTGTGAAAGAGAGCGCAAGCTGTGGGCAAGGG...AAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR GCA 90 bp GCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCCTAGAGCAAAGACTTCCTCCCTTCCACTaGAGCATATATCTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: AQAAVGRLRAAALGLEQRLPPFH*SIYLQP
Trigger: GGGCTGAAGATATATGCTGCAGTGGAAGGGAGGAAG...TCTTTGCTCTAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp GGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 2 (lower is better)
Translates to: GTWGLVSARDISRARCRASWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...AGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CCA 90 bp GGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: GTWGLVSARDISRARCRASLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...AGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR CCA 90 bp CTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGATGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LGTWGLVSARDISRARCRCIVSE*SHLPAS
Trigger: GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCA...TCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR CAA 90 bp GGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATC +
Preference number: 2 (lower is better)
Translates to: GCPSPEQSWSSGCRC*MQKFRLQRSQVSFI
Trigger: GATGAAACTGACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CAA 90 bp AGATCGGGTTGTGGCTCTGCTGGGAGAGGTACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGTGCTTGTAGAAGCCACAGCTTGTGC +
Preference number: 2 (lower is better)
Translates to: RSGCGSAGRGTGRHG*TWAGDSACRSHSLC
Trigger: GCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCCGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR GCA 90 bp ACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCACTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 2 (lower is better)
Translates to: TWGLVSARDISRARCRASLTRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG...TGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR GCA 90 bp GGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCAATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 2 (lower is better)
Translates to: GLVSARDISRARCRASSSISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...TGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGTGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMCIVSE*SHLPAS
Trigger: GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCA...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR TCA 90 bp GGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATTTCAGAGCTTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: GKTQCNVKEMRDSPHFRACTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...AGCTCTGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR TCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCGTAAGATCTGAAATTTaGACATCTGATCTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVVRSEI*TSDLCV
Trigger: CACACACAGATCAGATGTTCAAATTTCAGATCTTAC...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp TGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGATTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 2 (lower is better)
Translates to: CQRLSCIVSEWSHLPASRFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...TCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR GCA 90 bp AGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCCTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 2 (lower is better)
Translates to: SCQRLSCIVSEWSHLPASLTRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG...GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR GCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 2 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPLTRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409594.5
3UTR-3UTR GCA 90 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATT +
Preference number: 2 (lower is better)
Translates to: PSCQRLSCIVSEWSHLPACPSNL*PTHQAI
Trigger: AATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACA...GGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR GCA 90 bp CTTTCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGAATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 2 (lower is better)
Translates to: LSQEGKVPWNLGFGFCQGISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...TCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR GCA 90 bp GGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATTTCAGAGCTCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GKTQCNVKEMRDSPHFRALGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...AGCTCTGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR CCA 90 bp TTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCACTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 2 (lower is better)
Translates to: FVSVHPTSAQLTRPFCKALQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...TGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CCA 90 bp CACTCTCTGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 2 (lower is better)
Translates to: HSLCVCFCPSNLCPTHQAAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...GGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CCA 90 bp TCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATCCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: SQEGKVPWNLGFGFCQGHPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...ATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 2 (lower is better)
Translates to: VASDYLALCQSGPTYLPPRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CCA 90 bp AGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SCQRLSCIVSEWSHLPASRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR TCA 90 bp GTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCCTCTACGACAGACATTaGAGAGGTGGAGGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: VSVHPTSAQLTRPFCKAILYDRH*RGGGQR
Trigger: CCTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAG...GATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp GGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATTTCAGAGCTTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATT +
Preference number: 2 (lower is better)
Translates to: GKTQCNVKEMRDSPHFRACPSNL*PTHQAI
Trigger: AATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACA...AGCTCTGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
3UTR-3UTR CCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTATCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CAA 90 bp AGGGAGAAAGAAGACCAGCGTCCTTGGACTTCACTCTCTGTGTGTTaGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCT +
Preference number: 2 (lower is better)
Translates to: REKEDQRPWTSLSVC*FLSIQPLPNSPGHS
Trigger: AGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCTTTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR TCA 90 bp TTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTCTACGACAGACATTaGAGAGGTGGAGGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: FLSIQPLPNSPGHSAKQSLYDRH*RGGGQR
Trigger: CCTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAG...TGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR CCA 90 bp TTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCATCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: FLSIQPLPNSPGHSAKQSSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...TGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
3UTR-3UTR GCA 90 bp ATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: ILRPSCQRLSCIVSEWSHLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...GTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CCA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTAGGTACCTTGGAACCTaGGGTTTGGTTTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: FETKLPAIILHCVRVVPPRYLGT*GLVSAR
Trigger: CCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCT...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CCA 90 bp TATTCTGCCTCACTGGCTGACAGTGCTTGTGCTAAAGCTAGGTCTTCTTCCTCCGAGGGTAAGGTACCTTaGAACCTGGGGTTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: YSASLADSACAKARSSSSEGKVP*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTC...GGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp GATTATCTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCCCGGTGGTCCCACCTACCTaGCTCCAGACCAAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: DYLNLHSNTTRWVLVLSPVVPPT*LQTKPL
Trigger: CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCAC...CGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR CCA 90 bp AGAAAGAAGACCAGCGTCCTTGGACTTCACTCTCTGTGTGTTTGTTTCTGTCCAAGGTACCTTGGAACCTaGGGTTTGGTTTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: RKKTSVLGLHSLCVCFCPRYLGT*GLVSAR
Trigger: CCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCT...TGGACAGAAACAAACACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CCA 90 bp GTTCATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGCTAAGAGTAGGGCCTaGCCAGCATCCACTGAGGGC +
Preference number: 2 (lower is better)
Translates to: VHLNFETKLPAIILHCVRAKSRA*PASTEG
Trigger: GCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGC...TCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR CCA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTAGCAACACTACAAGGTaGGTATTAGTATTGTCCCCG +
Preference number: 2 (lower is better)
Translates to: FETKLPAIILHCVRVVPPSNTTR*VLVLSP
Trigger: CGGGGACAATACTAATACCCACCTTGTAGTGTTGCT...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR CAA 90 bp CATATAGTTCATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTaGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAG +
Preference number: 2 (lower is better)
Translates to: HIVHLNFETKLPAII*HCVRVVPPTCLQTK
Trigger: CTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATGAACTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR GCA 90 bp GTTCATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGACCCTTGCCCACAGCTTaGGCTCTCTTTCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: VHLNFETKLPAIILHCVRPLPTA*ALFHKR
Trigger: CCTCTTGTGAAAGAGAGCGCAAGCTGTGGGCAAGGG...TCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR GCA 90 bp GAGGATTATCTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATT +
Preference number: 2 (lower is better)
Translates to: EDYLNLHSNTTRWVLVLSCPSNL*PTHQAI
Trigger: AATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACA...GGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR GCA 90 bp GTTCATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGATCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 2 (lower is better)
Translates to: VHLNFETKLPAIILHCVRSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...TCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CCA 90 bp GTTCATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGAGGGTAAGGTACCTTaGAACCTGGGGTTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: VHLNFETKLPAIILHCVREGKVP*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTC...TCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR GCA 72 bp TCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGGCCTCCTCTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: SQGDLHITPACL*PPGCSGPPLPV
Trigger: CACAGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR TCA 72 bp GCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCAGGTGAACCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: APGLLSLCTLEV*GPQSSSGEPPS
Trigger: GGAGGGAGGTTCACCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR GCA 72 bp CTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGT +
Preference number: 3 (lower is better)
Translates to: LHITPACLCPPG*SGPPLPVYPRG
Trigger: ACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR GCA 72 bp AGCCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCCCTCCCCAGAGCAATC +
Preference number: 3 (lower is better)
Translates to: SHSLCSGDGSKS*PAGWVPLPRAI
Trigger: GATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 72 bp TGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: CSGDGSKSCPAG*VPLPRAIMVQW
Trigger: CCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CAA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLPTREQ*LAALFH
Trigger: ATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGG...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR CAA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CAA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCCCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CCA 72 bp CTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCA +
Preference number: 3 (lower is better)
Translates to: LVLWRWQQVLPG*LGAPPQSNHGP
Trigger: TGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CAA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CCA 72 bp CAGGGAACAGTTGCTAGCCGCTCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: QGTVASRSLPCS*STSKAFQRLPG
Trigger: CCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGAGCGGCTAGCAACTGTTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CCA 72 bp GCCCGGCTGGTTGGGTGCCCCTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGCTTGATGCAGAAGTTT +
Preference number: 3 (lower is better)
Translates to: ARLVGCPSPEQS*SSGCRCLMQKF
Trigger: AAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR GCA 72 bp GGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAGTTTCGGCTACAGCGT +
Preference number: 3 (lower is better)
Translates to: GCPSPEQSWSSG*RCLMQKFRLQR
Trigger: ACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CAA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTPTREQ*LAALFH
Trigger: ATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGG...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR-3UTR CAA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCTCACTCTCTGTGTGTTaGTTTCTGTCCATCCAACCT +
Preference number: 3 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLSLSVC*FLSIQP
Trigger: AGGTTGGATGGACAGAAACAAACACACAGAGAGTGA...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
3UTR GCA 72 bp GTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGGGCTGTCCAGGACGGA +
Preference number: 3 (lower is better)
Translates to: VHPTSAQLTRPF*KAITGGAVQDG
Trigger: TCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR GCA 72 bp GAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTC +
Preference number: 3 (lower is better)
Translates to: EGKVPWNLGFGF*QGHFQGPLQSF
Trigger: GAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR CCA 72 bp GGTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCAGAAGTTTCGGCTACA +
Preference number: 3 (lower is better)
Translates to: GWVPLPRAIMVQ*MPVLDAEVSAT
Trigger: TGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CAA 90 bp GGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATTTCAGAGCTCCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: GKTQCNVKEMRDSPHFRAPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...AGCTCTGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR CAA 90 bp GAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 3 (lower is better)
Translates to: EPGVWFLPGTFPGPAAELLGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...AAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CAA 90 bp CTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGACTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 3 (lower is better)
Translates to: LGTWGLVSARDISRARCRLGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...TCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR GCA 72 bp CCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGGCTACAGCGTTCACAG +
Preference number: 3 (lower is better)
Translates to: PSPEQSWSSGCR*LMQKFRLQRSQ
Trigger: CTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CAA 90 bp CTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATGCTCTACGACAGACATaGAAGAGGTGGAGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: LTRPFCKAITGGAVQDGDALRQT*KRWRSE
Trigger: CTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAGC...ATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR CAA 90 bp GGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCACTCTAAGAAGACCAGCGTCCTaGGACTTCACTCTCTGTGTG +
Preference number: 3 (lower is better)
Translates to: GFCQGHFQGPLQSFILTLRRPAS*DFTLCV
Trigger: CACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCT...TAGAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CAA 90 bp AGTGCTTGTAGAAGCCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 3 (lower is better)
Translates to: SACRSHSLCSGDGSKSCPSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...CGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACAAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR TCA 72 bp CCCCAGAGCAATCATGGTCCAGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTACAGCGTTCACAGGTCA +
Preference number: 3 (lower is better)
Translates to: PQSNHGPVDAGA*CRSFGYSVHRS
Trigger: TGACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR CCA 72 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: PSCQRLSCIVSE*SHLPASRPSPC
Trigger: GCAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CAA 90 bp AACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTGCTCTACGACAGACATaGAAGAGGTGGAGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: NLCPTHQAILQSNHWRGCALRQT*KRWRSE
Trigger: CTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAGC...ACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR CCA 72 bp CATATATCTTCAGCCCAGCCTCATACCTGCTGCCGCTaGTATTCTGCCTCACTGGCTGACAGTGCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: HISSAQPHTCCR*YSASLADSACA
Trigger: AGCACAAGCACTGTCAGCCAGTGAGGCAGAATACCAGCGGCAGCAGGTATGAGGCTGGGCTGAAGATATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR-3UTR CAA 90 bp GGGAAGGAGGGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATAGCGATTATCTTGCATaGTGTCAGAGTGGTCCCACC +
Preference number: 3 (lower is better)
Translates to: GKEGKTQCNVKEMRDSPHSDYLA*CQSGPT
Trigger: GGTGGGACCACTCTGACACAATGCAAGATAATCGCT...ATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCCCTCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR TCA 72 bp AGGACGGAGATCGGGTTGTGGCTCTACGACAGACATTaGAGAGGTGGAGGTCAGAGGTGTGAAGGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: RTEIGLWLYDRH*RGGGQRCEGEK
Trigger: TTTTTCCCCTTCACACCTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR CAA 90 bp GCTTCATCCTCACTCTACAAAGGGAGAAAGAAGACCAGCGTCCTTGGACTTCACAGGACGGAGATCGGGTaGTGGCTCTACGACAGACAT +
Preference number: 3 (lower is better)
Translates to: ASSSLYKGRKKTSVLGLHRTEIG*WLYDRH
Trigger: ATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCT...GTGAAGTCCAAGGACGCTGGTCTTCTTTCTCCCTTTGTAGAGTGAGGATGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
3UTR-3UTR CAA 90 bp AGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAAGAAGACCAGCGTCCTaGGACTTCACTCTCTGTGTG +
Preference number: 3 (lower is better)
Translates to: SDYLALCQSGPTYLPPDQRRPAS*DFTLCV
Trigger: CACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCT...TTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CAA 90 bp GACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 3 (lower is better)
Translates to: DQVASDYLALCQSGPTYLLGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...CAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CAA 90 bp AGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAAGCGATTATCTTGCATaGTGTCAGAGTGGTCCCACC +
Preference number: 3 (lower is better)
Translates to: SDYLALCQSGPTYLPPDQSDYLA*CQSGPT
Trigger: GGTGGGACCACTCTGACACAATGCAAGATAATCGCT...TTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR-3UTR CAA 90 bp ATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 3 (lower is better)
Translates to: ILRPSCQRLSCIVSEWSHKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...GTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR-3UTR CAA 90 bp AGAAAGAAGACCAGCGTCCTTGGACTTCACTCTCTGTGTGTTTGTTTCTGTCCAACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 3 (lower is better)
Translates to: RKKTSVLGLHSLCVCFCPTGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...TGGACAGAAACAAACACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
3UTR GCA 72 bp CACTCTCTGTGTGTTTGTTTCTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATTCTGCAAAGCAATCAC +
Preference number: 3 (lower is better)
Translates to: HSLCVCFCPSNL*PTHQAILQSNH
Trigger: GTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
3UTR TCA 72 bp AACAGTTTAAGTTGGATGATGGTAAGATCTGAAATTTaGACATCTGATCTGTGTGTGTTGGGCCTCATGGTG +
Preference number: 3 (lower is better)
Translates to: NSLSWMMVRSEI*TSDLCVLGLMV
Trigger: CACCATGAGGCCCAACACACACAGATCAGATGTTCAAATTTCAGATCTTACCATCATCCAACTTAAACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
3UTR CCA 72 bp GAGGATTATCTCAATCTTCATAGCAACACTACAAGGTaGGTATTAGTATTGTCCCCGTTTTATAGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: EDYLNLHSNTTR*VLVLSPFYRGN
Trigger: ATTTCCTCTATAAAACGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCTGGCGGGCTCCCTaGCCCGCCCCTTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLLWRAP*PAPSSP
Trigger: GGGAGAGGAAGGGGCGGGGCAGGGAGCCCGCCAGAG...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289528.10
ENST00000409594.5
CDS-3UTR TCA 90 bp CCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGCTCGGCTCCGAACAGTaGGCGCCGAGGTCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: PRATSTSLPLVSALQGAPLGSEQ*APRSGN
Trigger: GTTTCCGGACCTCGGCGCTCACTGTTCGGAGCCGAG...CGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACACTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACATCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATSCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACACAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGCTGGCCAGCATCCACTaGGGGCCCAACCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: PRATSTSLPLVSALQGAPLASIH*GPNQGT
Trigger: TGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAG...CGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCCTGGCCAGCATCCACTaGGGGCCCAACCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLLASIH*GPNQGT
Trigger: TGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAG...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCCGGCTCTGGGCCTGCTaGCGCTGGTATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLRLWAC*RWYSAS
Trigger: TGAGGCAGAATACCAGCGGCAGCAGGCCCAGAGCCG...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTGGACGGCTTCGAGCTaGGGCTCTGGGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRWTASS*GSGPAA
Trigger: GGCAGCAGGCCCAGAGCCGCAGCTCGAAGCCGTCCA...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGTGGACGGCTTCGAGCTaGGGCTCTGGGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRWTASS*GSGPAA
Trigger: GGCAGCAGGCCCAGAGCCGCAGCTCGAAGCCGTCCA...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACACAGGGGGCTCCCCTCTaGCCACAGGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATQGAPL*PQAQAH
Trigger: ATGTGCCTGTGCCTGTGGCCAGAGGGGAGCCCCCTG...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLSCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GAKSRAWPASTEGPTREQQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...CTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGAGCACAGGCTGCAGTTaGACGGCTTCGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PRATSTSLPLVSALQGAPSTGCS*TASSCG
Trigger: GCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCT...CGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACACGGCTCTGGGCCTGCTaGCGCTGGTATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATRLWAC*RWYSAS
Trigger: TGAGGCAGAATACCAGCGGCAGCAGGCCCAGAGCCG...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGCTGCGGCTCTGGGCCTaGTGCCGCTGGTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: GAKSRAWPASTEGPTREQLRLWA*CRWYSA
Trigger: GGCAGAATACCAGCGGCAGCAGGCCCAGAGCCGCAG...CTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGCTGCGGCTCTGGGCCTaGTGCCGCTGGTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRLRLWA*CRWYSA
Trigger: GGCAGAATACCAGCGGCAGCAGGCCCAGAGCCGCAG...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTTGGACGGCTTCGAGCTaGGGCTCTGGGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LARPSRGSQGDLHITPACWTASS*GSGPAA
Trigger: GGCAGCAGGCCCAGAGCCGCAGCTCGAAGCCGTCCA...ACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ALARPSRGSQGDLHITPATPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACTCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNSCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACATTCGAGCTGCGGCTCTaGGCCTGCTGCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATFELRL*ACCRWY
Trigger: ATACCAGCGGCAGCAGGCCCAGAGCCGCAGCTCGAA...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCAGCACAGGCTGCAGTTaGACGGCTTCGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVSTGCS*TASSCG
Trigger: GCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCT...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGCTCTGGCGGGCTCCCTaGCCCGCCCCTTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QPLPNSPGHSAKQSLEGLLWRAP*PAPSSP
Trigger: GGGAGAGGAAGGGGCGGGGCAGGGAGCCCGCCAGAG...CAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR GCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCCGGCTCTGGGCCTGCTaGCGCTGGTATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLRLWAC*RWYSAS
Trigger: TGAGGCAGAATACCAGCGGCAGCAGGCCCAGAGCCG...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCTGGACGGCTTCGAGCTaGGGCTCTGGGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTWTASS*GSGPAA
Trigger: GGCAGCAGGCCCAGAGCCGCAGCTCGAAGCCGTCCA...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTGGCCCTAGCACAGGCTaGAGTTGGACGGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: ALARPSRGSQGDLHITPAGPSTG*SWTASS
Trigger: GCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCC...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGGGCCCTAGCACAGGCTaGAGTTGGACGGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRGPSTG*SWTASS
Trigger: GCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCC...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCGGCCCTAGCACAGGCTaGAGTTGGACGGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRGPSTG*SWTASS
Trigger: GCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCC...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTTCCAGGCCCCTTCCTaGCCACTCCACATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLFQAPS*PLHIGA
Trigger: TGCCCCGATGTGGAGTGGGCAGGAAGGGGCCTGGAA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTCCAGGCCCCTTCCTaGCCACTCCACATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRFQAPS*PLHIGA
Trigger: TGCCCCGATGTGGAGTGGGCAGGAAGGGGCCTGGAA...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCCCAGGGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCAGCCTCATACCTGCTaGCGCTGGTATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQGPSTGCSWTASSCGSGQPHTC*RWYSAS
Trigger: TGAGGCAGAATACCAGCGGCAGCAGGTATGAGGCTG...CCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCCCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: PRATSTSLPLVSALQGAPLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...CGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACATGGGCCTGCTGCCGCTaGTATTCTGCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATWACCR*YSASLA
Trigger: AGCCAGTGAGGCAGAATACCAGCGGCAGCAGGCCCA...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTTCGAGCTGCGGCTCTaGGCCTGCTGCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLFELRL*ACCRWY
Trigger: ATACCAGCGGCAGCAGGCCCAGAGCCGCAGCTCGAA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTAGCACAGGCTGCAGTTaGACGGCTTCGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ALARPSRGSQGDLHITPASTGCS*TASSCG
Trigger: GCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCT...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CAA 72 bp GTGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VLWRWQQVLPGW*GAPPQSNHGPV
Trigger: CACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR TCA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: GDLHITPACLCPPGCSGPRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTCTGGCCAGCATCCACTaGGGGCCCAACCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: GLRVGPGQHPLRAQPGNSLASIH*GPNQGT
Trigger: TGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAG...ACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GCCCAGGGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCTCTACGACAGACATTaGAGAGGTGGAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: AQGPSTGCSWTASSCGSGLYDRH*RGGGQR
Trigger: CCTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAG...CCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR GCA 90 bp CCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGTCTGCGCAGAAGATaGCTGAGCAGGCATCACACT +
Preference number: 4 (lower is better)
Translates to: PRATSTSLPLVSALQGAPGLRRR*LSRHHT
Trigger: AGTGTGATGCCTGCTCAGGCATCTTCTGCGCAGACC...CGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CAGGGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCCTCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGPSTGCSWTASSCGSGPLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...AGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCCTAGAGCAAAGAGGCCCTAGCACAGGCTaGAGTTGGACGGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: AQAAVGRLRAAALGLEQRGPSTG*SWTASS
Trigger: GCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCC...TCTTTGCTCTAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTCTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GTLEPGVWFLPGTFPGPALCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...AGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GCCCAGGGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AQGPSTGCSWTASSCGSGLTRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG...CCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGATCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LGTWGLVSARDISRARCRSCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...TCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EPGVWFLPGTFPGPAAELQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...AAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGGGTTGTGGCTCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATGLWLC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCC...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAACGGAGATCGGGTTGTaGCTCTGCTGGGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATTEIGL*LCWERY
Trigger: GTACCTCTCCCAGCAGAGCCACAACCCGATCTCCGT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGGGCAGGCCTACCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GAKSRAWPASTEGPTREQGRPTC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCC...CTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR TCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCAGAAGCGACGAGTGCTaGGCGTCTTTAGGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALRSDEC*ASLGLV
Trigger: CACGAGCCCTAAAGACGCTCAGCACTCGTCGCTTCT...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289528.10
ENST00000409594.5
CDS-3UTR TCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGCAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAKSRAWPASTEGPTREQCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...CTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GDLHITPACLCPPGCSGPQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp CTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: LQSNHWRGCPGRRSGCGSARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...AGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAAGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGACCAGGGGGCTCCCCTCTaGCCACAGGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: NHWRGCPGRRSGCGSTTDQGAPL*PQAQAH
Trigger: ATGTGCCTGTGCCTGTGGCCAGAGGGGAGCCCCCTG...GTCTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: GDLHITPACLCPPGCSGPAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QPLPNSPGHSAKQSLEGLSCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...CAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCACAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GLVSARDISRARCRASSSQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...TGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTGGTTGGGTGCCCCTCCCCAGAGAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ALEMAASPARLVGCPSPERHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...CTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp CCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PRATSTSLPLVSALQGAPRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...CGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GDLHITPACLCPPGCSGPRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCGGGTTGTGGCTCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLGLWLC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCC...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCGGGTTGTGGCTCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALGLWLC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCC...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTTGGGCCTGCTGCCGCTaGTATTCTGCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPWACCR*YSASLA
Trigger: AGCCAGTGAGGCAGAATACCAGCGGCAGCAGGCCCA...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACTGGGCCTGCTGCCGCTaGTATTCTGCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNWACCR*YSASLA
Trigger: AGCCAGTGAGGCAGAATACCAGCGGCAGCAGGCCCA...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGCACAGGCTGCAGTTaGACGGCTTCGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTSTGCS*TASSCG
Trigger: GCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCT...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTGCTAAGAGTAGGGCCTaGCCAGCATCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPAKSRA*PASTEG
Trigger: GCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGC...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTGCTAAGAGTAGGGCCTaGCCAGCATCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LARPSRGSQGDLHITPACAKSRA*PASTEG
Trigger: GCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGC...ACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GAGATGGCAGCAAGTCCTGCCCGGCTGGTTGGGTGCCCCTCCCCAGAGCAATCAAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: EMAASPARLVGCPSPEQSRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR TCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCAGGTCTTCTTCCTCCTaGCAACTTGGAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVRSSSS*QLGTWG
Trigger: ACCCCAGGTTCCAAGTTGTCAGGAGGAAGAAGACCT...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACATCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVSWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGACGGGCAGGCCTACCTaGTGGGAGAGGTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: AITGGAVQDGDRVVALRQTGRPT*WERYRK
Trigger: CTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCCCGT...CTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCCAGCCTCATACCTGCTaGCGCTGGTATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRQPHTC*RWYSAS
Trigger: TGAGGCAGAATACCAGCGGCAGCAGGTATGAGGCTG...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GCCCAGGGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGACCATTCCAAAACTCTaGACCACTAGGAAGAACCCC +
Preference number: 4 (lower is better)
Translates to: AQGPSTGCSWTASSCGSGTIPKL*TTRKNP
Trigger: GGGGTTCTTCCTAGTGGTGCAGAGTTTTGGAATGGT...CCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGCAGGGGGCTCCCCTCTaGCCACAGGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMQGAPL*PQAQAH
Trigger: ATGTGCCTGTGCCTGTGGCCAGAGGGGAGCCCCCTG...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTATCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLSCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCCCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCTCTGGAGATGGCAGCAAGTCCTGCCCGGCTGGTTGGGTGCCCCTCCCCAGAAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CSGDGSKSCPAGWVPLPRRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...TCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATCTCCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp TGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCGCTAAGAGTAGGGCCTaGCCAGCATCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: WNLGFGFCQGHFQGPLQSAKSRA*PASTEG
Trigger: GCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGC...GCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCCATACCTGCTGCCGCTaGTATTCTGCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALHTCCR*YSASLA
Trigger: AGCCAGTGAGGCAGAATACCAGCGGCAGCAGGTATG...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR TCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: LARPSRGSQGDLHITPACVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...ACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: GLRVGPGQHPLRAQPGNSVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...ACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCAGGTCTTCTTCCTCCTaGCAACTTGGAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLRSSSS*QLGTWG
Trigger: ACCCCAGGTTCCAAGTTGTCAGGAGGAAGAAGACCT...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGTCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLSWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGAGAAGCCACAGCTTGTaGTCTGGAGATGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRRSHSL*SGDGSK
Trigger: CTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCT...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCTCACTCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVSLRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGAGTGA...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LARPSRGSQGDLHITPACLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...ACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGTTCCAGGCCCCTTCCTaGCCACTCCACATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMFQAPS*PLHIGA
Trigger: TGCCCCGATGTGGAGTGGGCAGGAAGGGGCCTGGAA...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLCPSNL*PTHQAI
Trigger: AATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGGTGGTCCCACCTACCTaGCTCCAGACCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VPWNLGFGFCQGHFQGPLVVPPT*LQTKPL
Trigger: CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCAC...CAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GTWGLVSARDISRARCRASPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...AGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CACTCTCTGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCTCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSLCVCFCPSNLCPTHQASCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...GGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCTCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
3UTR CAA 72 bp TGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCATGCAGCTGGAGCACTA +
Preference number: 4 (lower is better)
Translates to: WPASTEGPTREQ*LAALFHAAGAL
Trigger: TAGTGCTCCAGCTGCATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp TGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: WNLGFGFCQGHFQGPLQSVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...GCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTACTGGCCAGCATCCACTaGGGGCCCAACCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLLASIH*GPNQGT
Trigger: TGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAG...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACACTTACGTTTTTGCTGTaGTGGATCAGAGCGACAGTC +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATLTFLL*WIRATV
Trigger: GACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAG...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTTACGTTTTTGCTGTaGTGGATCAGAGCGACAGTC +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVLTFLL*WIRATV
Trigger: GACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAG...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: VHPTSAQLTRPFCKAITGARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...TCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTCACTCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARPSRGSQGDLHITPACLSLRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGAGTGA...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCGGCTCTGGGCCTGCTaGCGCTGGTATTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGRLWAC*RWYSAS
Trigger: TGAGGCAGAATACCAGCGGCAGCAGGCCCAGAGCCG...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp AGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAACTCTGCCCTCCAGGGTaGTCCGGGCCTCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SDYLALCQSGPTYLPPDQLCPPG*SGPPLP
Trigger: AGGGAGAGGAGGCCCGGAGCACCCTGGAGGGCAGAG...TTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGTTCCAGGCCCCTTCCTaGCCACTCCACATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLFQAPS*PLHIGA
Trigger: TGCCCCGATGTGGAGTGGGCAGGAAGGGGCCTGGAA...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR GCA 90 bp TCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGTGGTCCCACCTACCTaGCTCCAGACCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SAQLTRPFCKAITGGAVQVVPPT*LQTKPL
Trigger: CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCAC...CTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCGAGGGGAAGACACAGTaGAACGTCAAGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSREGKTQ*NVKEMR
Trigger: CCTCATTTCCTTGACGTTGCACTGTGTCTTCCCCTC...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATTFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVTFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CCA 90 bp CTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: LARPSRGSQGDLHITPACAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...ACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTATCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVSCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGA...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTCCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GTWGLVSARDISRARCRAPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...AGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CTTCCATGCAGCTGGAGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LPCSWSTSKAFQRLPGRPRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...AGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCTTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVLEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACATTCCTCCTGACAACTTaGAACCTGGGGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATFLLTT*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAA...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGGGTATTCTGCCTCACTaGCTGACAGTGCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GAKSRAWPASTEGPTREQGILPH*LTVLVL
Trigger: TAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACC...CTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCGGTATTCTGCCTCACTaGCTGACAGTGCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLGILPH*LTVLVL
Trigger: TAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACC...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTATTCGAGCTGCGGCTCTaGGCCTGCTGCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLFELRL*ACCRWY
Trigger: ATACCAGCGGCAGCAGGCCCAGAGCCGCAGCTCGAA...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGACATTGAAGAGGTGGAGAGCACAGGCTGCAGTTaGACGGCTTCGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CPGRRSGCGSTTDIEEVESTGCS*TASSCG
Trigger: GCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCT...CTCCACCTCTTCAATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR CCA 90 bp GGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLRVGPGQHPLRAQPGNSSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...ACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGGCTAAGAGTAGGGCCTaGCCAGCATCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMAKSRA*PASTEG
Trigger: GCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGC...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCGAGGGTAAGGTACCTTaGAACCTGGGGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSREGKVP*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTC...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCTTTCAGAGCTCAGCATaGGCTGGAGTCATACTGAAA +
Preference number: 4 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLFQSSA*AGVILK
Trigger: TTTCAGTATGACTCCAGCCCATGCTGAGCTCTGAAA...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR TCA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAAAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGCAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGTCTTCTTCCTCCTaGCAACTTGGAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTRSSSS*QLGTWG
Trigger: ACCCCAGGTTCCAAGTTGTCAGGAGGAAGAAGACCT...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGTGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp TGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCAGGTCTTCTTCCTCCTaGCAACTGGGAGGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: WNLGFGFCQGHFQGPLQSRSSSS*QLGGRN
Trigger: GTTTCTCCCTCCCAGTTGTCAGGAGGAAGAAGACCT...GCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp ACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCAGGTCTGCGCAGAAGATaGCTGAGCAGGCATCACACT +
Preference number: 4 (lower is better)
Translates to: TWGLVSARDISRARCRASGLRRR*LSRHHT
Trigger: AGTGTGATGCCTGCTCAGGCATCTTCTGCGCAGACC...TGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCGGCCCTAGCACAGGCTaGAGTTGGACGGCTTCGAGC +
Preference number: 4 (lower is better)
Translates to: DYLALCQSGPTYLPPDQAGPSTG*SWTASS
Trigger: GCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCC...GGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATTTCAGAGCTACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GKTQCNVKEMRDSPHFRATPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...AGCTCTGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAACTCCCGCTTGTCTCTaGCCTCCAGGGTGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVTPACL*PPGCSG
Trigger: CCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGT...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: WNLGFGFCQGHFQGPLQSCPSNL*PTHQAI
Trigger: AATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACA...GCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACCCCTTGCCCACAGCTTaGGCTCTCTTTCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: AQLTRPFCKAITGGAVQDPLPTA*ALFHKR
Trigger: CCTCTTGTGAAAGAGAGCGCAAGCTGTGGGCAAGGG...GTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp AGTCCTGCCCGGCTGGTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCAGCGATTATCTTaGATTGTGTCAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPARLVGCPSPEQSWSSGCQRLS*IVSEWS
Trigger: GGACCACTCTGACACAATGCAAGATAATCGCTGGCA...TCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTACAGGGGGCTCCCCTCTaGCCACAGGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVQGAPL*PQAQAH
Trigger: ATGTGCCTGTGCCTGTGGCCAGAGGGGAGCCCCCTG...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLTFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CCA 90 bp TGCAGAAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTGCCCAAGTCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CRSFGYSVHRSVSSFLAAQVLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGACTTG...GGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAACTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGGGGTTGTGGCTCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMGLWLC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCC...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AGTGCTTGTAGAAGCCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: SACRSHSLCSGDGSKSCPLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...CGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACAAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: ALARPSRGSQGDLHITPALEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGTTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRLEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCTTCCTCCTGACAACTTaGAACCTGGGGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: AWPASTEGPTREQLLAALFLLTT*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAA...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCATTCGAGCTGCGGCTCTaGGCCTGCTGCCGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPFELRL*ACCRWY
Trigger: ATACCAGCGGCAGCAGGCCCAGAGCCGCAGCTCGAA...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCPCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGG...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCCCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAPCPAG*VPLPRA
Trigger: TGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGG...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR TCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGCAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp ATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: IQPLPNSPGHSAKQSLEGQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...CCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp CAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTCTCTACGACAGACATTaGAGAGGTGGAGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QAILQSNHWRGCPGRRSGLYDRH*RGGGQR
Trigger: CCTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAG...ACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR TCA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCGTTCACACTTATTGGTaGAGATCTTTTGGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLVHTYW*RSFGKQ
Trigger: CTGCTTACCAAAAGATCTTCACCAATAAGTGTGAAC...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621130.4
CDS-3UTR GCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: QAILQSNHWRGCPGRRSGSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...ACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAATCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACATGCAGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: PRTSLTQEVRRGVLEKHAARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...TGCATGTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp TTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCAGATGGCAGCAAGTCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSIQPLPNSPGHSAKQSDGSKS*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGACTTGCTGCCATC...TGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTAGAAGCCACAGCTTGTaGTCTGGAGATGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GTLEPGVWFLPGTFPGPARSHSL*SGDGSK
Trigger: CTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCT...AGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCACTCTAATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GFCQGHFQGPLQSFILTLISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...TAGAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp AACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NSPGHSAKQSLEGLSRTELGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...CTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCCAGCGATTATCTTaGATTGTGTCAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLRVGPGQHPLRAQPGNSCQRLS*IVSEWS
Trigger: GGACCACTCTGACACAATGCAAGATAATCGCTGGCA...ACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp CTCCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACATGTGGCTGCCATTACCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LQELALPRKSGGEFWKNMWLPLP*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCA...CATGTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CCA 90 bp CCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACATGCACAGGGGGCTCCCCTCTaGCCACAGGCACAGGCACAT +
Preference number: 4 (lower is better)
Translates to: PRTSLTQEVRRGVLEKHAQGAPL*PQAQAH
Trigger: ATGTGCCTGTGCCTGTGGCCAGAGGGGAGCCCCCTG...TGCATGTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CCA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAAGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGGGGTTGTGGCTCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGGLWLC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCC...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGACGGAGATCGGGTTGTaGCTCTGCTGGGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGTEIGL*LCWERY
Trigger: GTACCTCTCCCAGCAGAGCCACAACCCGATCTCCGT...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CCCAGAGCAATCATGGTCCAGTGGATGCCGGTGCTTGATGCAGAAGTTTCGGCTACGGAGATCGGGTTGTaGCTCTGCTGGGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PRAIMVQWMPVLDAEVSATEIGL*LCWERY
Trigger: GTACCTCTCCCAGCAGAGCCACAACCCGATCTCCGT...AGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp GGGAAGGAGGGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: GKEGKTQCNVKEMRDSPHLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...ATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCCCTCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCATGGGCCTGCTGCCGCTaGTATTCTGCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPWACCR*YSASLA
Trigger: AGCCAGTGAGGCAGAATACCAGCGGCAGCAGGCCCA...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGATCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGTWGLVSARDISRARCRSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...TCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGACATTGAAGAGGTCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GAVQDGDRVVALRQTLKRSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...CCTCTTCAATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAGCTAAGAGTAGGGCCTaGCCAGCATCCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPAKSRA*PASTEG
Trigger: GCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGC...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AGTGCTTGTAGAAGCCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCCTGCCCGTGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SACRSHSLCSGDGSKSCPCIVSE*SHLPAS
Trigger: GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCA...CGGGCAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACAAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp CCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACATGCAATTACCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRTSLTQEVRRGVLEKHAITLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGGTAAT...TGCATGTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR TCA 90 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCCAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: PSCQRLSCIVSEWSHLPAQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...GGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp AGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCCAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: SCQRLSCIVSEWSHLPASQEGMV*LGLGTV
Trigger: CACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTG...GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAGGTCTTCTTCCTCCTaGCAACTTGGAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMRSSSS*QLGTWG
Trigger: ACCCCAGGTTCCAAGTTGTCAGGAGGAAGAAGACCT...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCCTTACGTTTTTGCTGTaGTGGATCAGAGCGACAGTC +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTLTFLL*WIRATV
Trigger: GACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAG...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp ATCGGGTTGTGGCTCTGCTGGGAGAGGTACAGGAAGGCATGGTTTGACTTGGGCTCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: IGLWLCWERYRKAWFDLGSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...GCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR GCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAARLVG*PSPEQS
Trigger: TGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGC...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR GCA 90 bp GACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGACGGGCAGGCCTACCTaGTGGGAGAGGTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: DQVASDYLALCQSGPTYLTGRPT*WERYRK
Trigger: CTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCCCGT...CAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp CAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGCTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QPLPNSPGHSAKQSLEGLLTRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG...CAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp AACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: NSPGHSAKQSLEGLSRTECPSNL*PTHQAI
Trigger: AATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACA...CTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp CTTTCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGAGCCCAGCCTCATACCTaGTGCCGCTGGTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSQEGKVPWNLGFGFCQGAQPHT*CRWYSA
Trigger: GGCAGAATACCAGCGGCAGCAGGTATGAGGCTGGGC...TCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCTTCCTCCCTTCCACTaGAGCATATATCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPWNLGFGFCQGHFQGPLLPPFH*SIYLQP
Trigger: GGGCTGAAGATATATGCTGCAGTGGAAGGGAGGAAG...CAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp CACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGCTTCCTCCCTTCCACTaGAGCATATATCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HQAILQSNHWRGCPGRRSLPPFH*SIYLQP
Trigger: GGGCTGAAGATATATGCTGCAGTGGAAGGGAGGAAG...CGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR GCA 90 bp TATTCTGCCTCACTGGCTGACAGTGCTTGTGCTAAAGCTAGGTCTTCTTCCTCCTGGACGGCTTCGAGCTaGGGCTCTGGGCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: YSASLADSACAKARSSSSWTASS*GSGPRA
Trigger: TGCTCTAGGCCCAGAGCCGCAGCTCGAAGCCGTCCA...GGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCTGGCTGCCATTACCCTaGCCGGCTGGTTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAWLPLP*PAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCA...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCATCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCATCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTACCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCACGGAGATCGGGTTGTaGCTCTGCTGGGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SCQRLSCIVSEWSHLPASTEIGL*LCWERY
Trigger: GTACCTCTCCCAGCAGAGCCACAACCCGATCTCCGT...GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAACGGAGATCGGGTTGTaGCTCTGCTGGGAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPTEIGL*LCWERY
Trigger: GTACCTCTCCCAGCAGAGCCACAACCCGATCTCCGT...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCACTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPLQSNH*RGCPGR
Trigger: CCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCTTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTLEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCTTCCTCCTGACAACTTaGAACCTGGGGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTFLLTT*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAA...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCGGCAGGCCTACCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSVHPTSAQLTRPFCKAIGRPTC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCC...GATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CCA 90 bp AATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGACGAGGGTAAGGTACCTTaGAACCTGGGGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NHWRGCPGRRSGCGSTTDEGKVP*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTC...GTCTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CCA 90 bp TGCTGCCGCTGGTATTCTGCCTCACTGGCTGACAGTGCTTGTGCTAAAGCTAGGTGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CCRWYSASLADSACAKARCIVSE*SHLPAS
Trigger: GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCA...CCTAGCTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACCAGCGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCCTAGAGCAAAGAAGCAACACTACAAGGTaGGTATTAGTATTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: AQAAVGRLRAAALGLEQRSNTTR*VLVLSP
Trigger: CGGGGACAATACTAATACCCACCTTGTAGTGTTGCT...TCTTTGCTCTAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTAGCAACACTACAAGGTaGGTATTAGTATTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GLRVGPGQHPLRAQPGNSSNTTR*VLVLSP
Trigger: CGGGGACAATACTAATACCCACCTTGTAGTGTTGCT...ACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCATTACCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAITLPG*LGAPPQ
Trigger: CTGGGGAGGGGCACCCAACCAGCCGGGCAGGGTAAT...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
3UTR CAA 72 bp TCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTACAGCGTTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: SPEQSWSSGCRC*MQKFRLQRSQV
Trigger: GACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR TCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR TCA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR TCA 90 bp AGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTGCCGGCAGCGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: SFGYSVHRSVSSFLAAGSVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...GCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR TCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTATGTACCCTAGAGGTGTaGGGGCCACAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVCTLEV*GPQSSS
Trigger: TGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACA...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp GATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCGGTCTGCGCAGAAGATaGCTGAGCAGGCATCACACT +
Preference number: 4 (lower is better)
Translates to: DYLALCQSGPTYLPPDQAGLRRR*LSRHHT
Trigger: AGTGTGATGCCTGCTCAGGCATCTTCTGCGCAGACC...GGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp TGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGACATTGAAGAGGTGGAGCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: CPGRRSGCGSTTDIEEVEQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...CTCCACCTCTTCAATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp ATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: IQPLPNSPGHSAKQSLEGQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...CCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp CTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTCTTACGTTTTTGCTGTaGTGGATCAGAGCGACAGTC +
Preference number: 4 (lower is better)
Translates to: LQSNHWRGCPGRRSGCGSLTFLL*WIRATV
Trigger: GACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAG...AGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTCTTACGTTTTTGCTGTaGTGGATCAGAGCGACAGTC +
Preference number: 4 (lower is better)
Translates to: GTLEPGVWFLPGTFPGPALTFLL*WIRATV
Trigger: GACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAG...AGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGTCACTCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMSLRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGAGTGA...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp ATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IQPLPNSPGHSAKQSLEGLTRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG...CCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp TTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCAGCCCAGCCTCATACCTaGTGCCGCTGGTATTCTGCC +
Preference number: 4 (lower is better)
Translates to: FLSIQPLPNSPGHSAKQSAQPHT*CRWYSA
Trigger: GGCAGAATACCAGCGGCAGCAGGTATGAGGCTGGGC...TGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR CCA 90 bp AGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGCCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RVRYLGTWGLVSARDISRPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...CCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp AATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGACTTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: NHWRGCPGRRSGCGSTTDLEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...GTCTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCATGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPCIVSE*SHLPAS
Trigger: GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCA...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCCATACCTGCTGCCGCTaGTATTCTGCCTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: PSCQRLSCIVSEWSHLPAHTCCR*YSASLA
Trigger: AGCCAGTGAGGCAGAATACCAGCGGCAGCAGGTATG...GGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR TCA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: ALARPSRGSQGDLHITPAVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR TCA 90 bp ATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTGGCCAGCATCCACTaGGGGCCCAACCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: ILRPSCQRLSCIVSEWSHLASIH*GPNQGT
Trigger: TGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAG...GTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp AGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTGCCGGCAGCCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: SFGYSVHRSVSSFLAAGSQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...GCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR GCA 90 bp TGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: CVFVSVHPTSAQLTRPFCFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...GCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCATCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCATCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPSWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGAGAAGCCACAGCTTGTaGTCTGGAGATGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SIQPLPNSPGHSAKQSLERSHSL*SGDGSK
Trigger: CTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCT...CTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAAGAAGCCACAGCTTGTaGTCTGGAGATGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPRSHSL*SGDGSK
Trigger: CTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCT...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGTCACTCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGSLRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGAGTGA...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: CVFVSVHPTSAQLTRPFCISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...GCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTACTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTGTGGTCCCACCTACCTaGCTCCAGACCAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: FETKLPAIILHCVRVVPPVVPPT*LQTKPL
Trigger: CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCAC...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCATTTTGAGACCAAGTTaGCAGCGATTATCTTGCATT +
Preference number: 4 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRILRPS*QRLSCI
Trigger: AATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp AAAGACTCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAAGTGGAGGACTTGGCTaGCATTACCCTGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KDSPSRQGRVEAPQFITTSGGLG*HYPARL
Trigger: CAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCACT...TGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGAGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCAGTGGAGGACTTGGCTaGCATTACCCTGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCSGGLG*HYPARL
Trigger: CAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCACT...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CCA 90 bp CTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LTRPFCKAITGGAVQDGDTFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...ATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: PSCQRLSCIVSEWSHLPAAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...GGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCATCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: FLSIQPLPNSPGHSAKQSSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...TGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp TGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCCCACAGCTTGTGCTCTaGAGATGGCAGCAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CVFVSVHPTSAQLTRPFCPQLVL*RWQQVL
Trigger: CAGGACTTGCTGCCATCTCCAGAGCACAAGCTGTGG...GCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp TGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGAAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CQRLSCIVSEWSHLPASRRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...TCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp TGCAGAGCTTCATCCTCACTCTACAAAGGGAGAAAGAAGACCAGCGTCCTTGGAGGGTTGTGGCTCTGCTaGGAGAGGTACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CRASSSLYKGRKKTSVLGGLWLC*ERYRKA
Trigger: TGCCTTCCTGTACCTCTCCCAGCAGAGCCACAACCC...TCCAAGGACGCTGGTCTTCTTTCTCCCTTTGTAGAGTGAGGATGAAGCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CCA 90 bp CAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: QPLPNSPGHSAKQSLEGLLEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...CAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGGGTATTCTGCCTCACTaGCTGACAGTGCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGGILPH*LTVLVL
Trigger: TAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACC...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp AGCATGGGCTGGAGTCATACTGAAAACCAGACGATAACCACCATTCCAAAACTCAGCACAGGCTGCAGTTaGACGGCTTCGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SMGWSHTENQTITTIPKLSTGCS*TASSCG
Trigger: GCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCT...GAGTTTTGGAATGGTGGTTATCGTCTGGTTTTCAGTATGACTCCAGCCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCATCTCTTCCATGCAGCTaGAGCACTAGCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPSLPCS*STSKAF
Trigger: GAAGGCCTTGCTAGTGCTCCAGCTGCATGGAAGAGA...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCAGGTACCTTGGAACCTaGGGTTTGGTTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DYLALCQSGPTYLPPDQARYLGT*GLVSAR
Trigger: CCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCT...GGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CTCCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACATGAGCAAGTGGAGGACTTaGCTGCCATTACCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LQELALPRKSGGEFWKNMSKWRT*LPLPCP
Trigger: CGGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGCT...CATGTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CCA 90 bp CAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTATGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: QAILQSNHWRGCPGRRSGMFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACAT...ACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR TCA 90 bp AGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTGAGTCAAGAAGCGACGAGTGCTaGGCGTCTTTAGGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: SRQGRVEAPQFITTELESRSDEC*ASLGLV
Trigger: CACGAGCCCTAAAGACGCTCAGCACTCGTCGCTTCT...TGACTCAAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR TCA 90 bp CTCATTTCAGAGCTCAGCATGGGCTGGAGTCATACTGAAAACCAGACGATAACCAGAAGCGACGAGTGCTaGGCGTCTTTAGGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LISELSMGWSHTENQTITRSDEC*ASLGLV
Trigger: CACGAGCCCTAAAGACGCTCAGCACTCGTCGCTTCT...GGTTATCGTCTGGTTTTCAGTATGACTCCAGCCCATGCTGAGCTCTGAAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR TCA 90 bp GGGAAGGAGGGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATGGTGCTGAGCACTGCTaGGGATTATCTCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: GKEGKTQCNVKEMRDSPHGAEHC*GLSQSS
Trigger: TGAAGATTGAGATAATCCTCAGCAGTGCTCAGCACC...ATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCCCTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTACAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp TTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCATTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: FVSVHPTSAQLTRPFCKAFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...TGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp GTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSVHPTSAQLTRPFCKAISWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...GATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAAGAAGCCACAGCTTGTaGTCTGGAGATGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVRSHSL*SGDGSK
Trigger: CTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCT...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR GCA 90 bp TATTCTGCCTCACTGGCTGACAGTGCTTGTGCTAAAGCTAGGTCTTCTTCCTCCATTTCCAGGGCCCGCTaGAGAGCTTCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: YSASLADSACAKARSSSSISRAR*RASSSL
Trigger: GAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAAT...GGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp TGCAGAGCTTCATCCTCACTCTACAAAGGGAGAAAGAAGACCAGCGTCCTTGGACTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CRASSSLYKGRKKTSVLGLGFGF*QGHFQG
Trigger: GCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAG...TCCAAGGACGCTGGTCTTCTTTCTCCCTTTGTAGAGTGAGGATGAAGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp TCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTGTCCATCCAACCTCTaGCCAACTCACCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: SQEGKVPWNLGFGFCQGHCPSNL*PTHQAI
Trigger: AATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACA...ATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp TATTCTGCCTCACTGGCTGACAGTGCTTGTGCTAAAGCTAGGTCTTCTTCCTCCCCCTTGCCCACAGCTTaGGCTCTCTTTCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: YSASLADSACAKARSSSSPLPTA*ALFHKR
Trigger: CCTCTTGTGAAAGAGAGCGCAAGCTGTGGGCAAGGG...GGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp TTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCACTCTACATGCCAGCGATTATCTTaGATTGTGTCAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: FLPGTFPGPAAELHPHSTCQRLS*IVSEWS
Trigger: GGACCACTCTGACACAATGCAAGATAATCGCTGGCA...TGTAGAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCGAGGGGAAGACACAGTaGAACGTCAAGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: PSCQRLSCIVSEWSHLPAEGKTQ*NVKEMR
Trigger: CCTCATTTCCTTGACGTTGCACTGTGTCTTCCCCTC...GGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLTFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CCA 90 bp AGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTGAGTCATCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SRQGRVEAPQFITTELESSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...TGACTCAAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCTCCCCAGAGCAATCATaGTCCAGTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCSPEQS*SSGCRC
Trigger: GCACCGGCATCCACTGGACCATGATTGCTCTGGGGA...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGGTATTCTGCCTCACTaGCTGACAGTGCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPGILPH*LTVLVL
Trigger: TAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACC...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCAGGTACCTTGGAACCTaGGGTTTGGTTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VSVHPTSAQLTRPFCKAIRYLGT*GLVSAR
Trigger: CCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCT...GATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp TCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATAGGTACCTTGGAACCTaGGGTTTGGTTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQEGKVPWNLGFGFCQGHRYLGT*GLVSAR
Trigger: CCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCT...ATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGAGGGTAAGGTACCTTaGAACCTGGGGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPEGKVP*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTC...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CACTCTCTGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCGAGGGTAAGGTACCTTaGAACCTGGGGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HSLCVCFCPSNLCPTHQAEGKVP*NLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTC...GGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp CTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATAGCAACACTACAAGGTaGGTATTAGTATTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LTRPFCKAITGGAVQDGDSNTTR*VLVLSP
Trigger: CGGGGACAATACTAATACCCACCTTGTAGTGTTGCT...ATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGAGCTCAGCATGGGCTaGAGTCATACTGAAAACCAG +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPELSMG*SHTENQ
Trigger: CTGGTTTTCAGTATGACTCCAGCCCATGCTGAGCTC...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCAGCAAGTGGAGGACTTaGCTGCCATTACCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCSKWRT*LPLPCP
Trigger: CGGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGCT...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR TCA 90 bp AGAAAGAAGACCAGCGTCCTTGGACTTCACTCTCTGTGTGTTTGTTTCTGTCCAAGAAGCGACGAGTGCTaGGCGTCTTTAGGGCTCGTG +
Preference number: 4 (lower is better)
Translates to: RKKTSVLGLHSLCVCFCPRSDEC*ASLGLV
Trigger: CACGAGCCCTAAAGACGCTCAGCACTCGTCGCTTCT...TGGACAGAAACAAACACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp AAAGACTCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: KDSPSRQGRVEAPQFITTRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...TGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGAGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR TCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR TCA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR TCA 90 bp GTCTGTAGGGAAGAGAGATTTTTGGCATGTCTCCAAGAACTAGCCTTACCCAGGGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: VCREERFLACLQELALPRVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...CCTGGGTAAGGCTAGTTCTTGGAGACATGCCAAAAATCTCTCTTCCCTACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR TCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCGTGGATGCCGGTGCTTaGTGCAGAAGTTTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCVDAGA*CRSFGY
Trigger: GTAGCCGAAACTTCTGCATCAAGCACCGGCATCCAC...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR TCA 90 bp GATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCGGTGCTGAGCACTGCTaGGGATTATCTCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: DYLALCQSGPTYLPPDQAGAEHC*GLSQSS
Trigger: TGAAGATTGAGATAATCCTCAGCAGTGCTCAGCACC...GGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR TCA 90 bp GGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATTTCAGAGCTGCAACGTCAAGGAAATaGGGGACAGCCCTCATTTCA +
Preference number: 4 (lower is better)
Translates to: GKTQCNVKEMRDSPHFRAATSRK*GTALIS
Trigger: TGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGC...AGCTCTGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp CCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACATGCACAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: PRTSLTQEVRRGVLEKHAQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...TGCATGTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp AGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTGAGTCATTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: SRQGRVEAPQFITTELESFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...TGACTCAAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAFIISR*RQPARS
Trigger: TGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAA...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR GCA 90 bp CCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACATGCATCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRTSLTQEVRRGVLEKHASWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...TGCATGTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp AGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTAGAAGCCACAGCTTGTaGTCTGGAGATGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RPSCQRLSCIVSEWSHLPRSHSL*SGDGSK
Trigger: CTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCT...AGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp AGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTCTCACCAGGCCATTCTaGAAAGCAATCACTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RPSCQRLSCIVSEWSHLPLTRPF*KAITGG
Trigger: CCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG...AGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GAGCTTCATCCTCACTCTACAAAGGGAGAAAGAAGACCAGCGTCCTTGGACTTCGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: ELHPHSTKGERRPASLDFAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...GAAGTCCAAGGACGCTGGTCTTCTTTCTCCCTTTGTAGAGTGAGGATGAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCTTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: DYLALCQSGPTYLPPDQALEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...GGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGAGCTCAGCATGGGCTaGAGTCATACTGAAAACCAG +
Preference number: 4 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVELSMG*SHTENQ
Trigger: CTGGTTTTCAGTATGACTCCAGCCCATGCTGAGCTC...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp AACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTTTTCAGAGCTCAGCATaGGCTGGAGTCATACTGAAA +
Preference number: 4 (lower is better)
Translates to: NLCPTHQAILQSNHWRGCFQSSA*AGVILK
Trigger: TTTCAGTATGACTCCAGCCCATGCTGAGCTCTGAAA...ACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409594.5
3UTR CAA 72 bp GAAGACCAGCGTCCTTGGACTTCACTCTCTGTGTGTTaGTTTCTGTCCATCCAACCTCTGCCCAACTCACCA +
Preference number: 4 (lower is better)
Translates to: EDQRPWTSLSVC*FLSIQPLPNSP
Trigger: TGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp GTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAACGTCAAGGAAATaGGGGACAGCCCTCATTTCA +
Preference number: 4 (lower is better)
Translates to: VFVSVHPTSAQLTRPFCKATSRK*GTALIS
Trigger: TGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGC...TTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR GCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCCAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAQSLSM*SPTARS
Trigger: TGACCGTGCTGTGGGAGAGCACATTGACAGAGACTG...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR GCA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR GCA 90 bp AAAGACTCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACATCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: KDSPSRQGRVEAPQFITTSSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...TGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGAGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCTCCAGTGGATGCCGGTaGTTGATGCAGAAGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAASSGCR*LMQKFR
Trigger: CCGAAACTTCTGCATCAAGCACCGGCATCCACTGGA...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR GCA 90 bp ATTTCAGAGCTCAGCATGGGCTGGAGTCATACTGAAAACCAGACGATAACCACCTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ISELSMGWSHTENQTITTSWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...GGTGGTTATCGTCTGGTTTTCAGTATGACTCCAGCCCATGCTGAGCTCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FETKLPAIILHCVRVVPPSWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAASWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR GCA 90 bp GTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGATTTTGAGACCAAGTTaGCAGCGATTATCTTGCATT +
Preference number: 4 (lower is better)
Translates to: VPWNLGFGFCQGHFQGPLILRPS*QRLSCI
Trigger: AATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT...CAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp CACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGATTTTGAGACCAAGTTaGCAGCGATTATCTTGCATT +
Preference number: 4 (lower is better)
Translates to: HQAILQSNHWRGCPGRRSILRPS*QRLSCI
Trigger: AATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT...CGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR GCA 90 bp AGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAACCATTCCAAAACTCTaGACCACTAGGAAGAACCCC +
Preference number: 4 (lower is better)
Translates to: SDYLALCQSGPTYLPPDQTIPKL*TTRKNP
Trigger: GGGGTTCTTCCTAGTGGTGCAGAGTTTTGGAATGGT...TTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GATTATCTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCCCGTGGACGGCTTCGAGCTaGGGCTCTGGGCCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: DYLNLHSNTTRWVLVLSPWTASS*GSGPRA
Trigger: TGCTCTAGGCCCAGAGCCGCAGCTCGAAGCCGTCCA...CGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CCA 90 bp ATTTCAGAGCTCAGCATGGGCTGGAGTCATACTGAAAACCAGACGATAACCACCGCAATCATGGTCCAGTaGATGCCGGTGCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: ISELSMGWSHTENQTITTAIMVQ*MPVLDA
Trigger: TGCATCAAGCACCGGCATCCACTGGACCATGATTGC...GGTGGTTATCGTCTGGTTTTCAGTATGACTCCAGCCCATGCTGAGCTCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CCA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FETKLPAIILHCVRVVPPRHGLT*AGDSAC
Trigger: ACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCT...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp AGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAATTGGAACCTGGGGTTTaGTTTCTGCCAGGGACATTT +
Preference number: 4 (lower is better)
Translates to: SDYLALCQSGPTYLPPDQLEPGV*FLPGTF
Trigger: AAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAA...TTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp AGAAAGAAGACCAGCGTCCTTGGACTTCACTCTCTGTGTGTTTGTTTCTGTCCATGCATTGTGTCAGAGTaGTCCCACCTACCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKKTSVLGLHSLCVCFCPCIVSE*SHLPAS
Trigger: GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCA...TGGACAGAAACAAACACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp TTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAGGTGCTGAGCACTGCTaGGGATTATCTCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: FVSVHPTSAQLTRPFCKAGAEHC*GLSQSS
Trigger: TGAAGATTGAGATAATCCTCAGCAGTGCTCAGCACC...TGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR TCA 90 bp ATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACAGGTCTTCTTCCTCCTaGCAACTGGGAGGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: ILRPSCQRLSCIVSEWSHRSSSS*QLGGRN
Trigger: GTTTCTCCCTCCCAGTTGTCAGGAGGAAGAAGACCT...GTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp AGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SCQRLSCIVSEWSHLPASKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: DYLALCQSGPTYLPPDQAKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...GGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp ATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACTCATGGTCCAGTGGATaGCGGTGCTTGATGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ILRPSCQRLSCIVSEWSHSWSSG*RCLMQK
Trigger: CTTCTGCATCAAGCACCGGCATCCACTGGACCATGA...GTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VFVSVHPTSAQLTRPFCKTFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...TTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CCA 90 bp GAGAGATTTTTGGCATGTCTCCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ERFLACLQELALPRKSGGTFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...CCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGGAGACATGCCAAAAATCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CCA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTGGTATTCTGCCTCACTaGCTGACAGTGCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: FETKLPAIILHCVRVVPPGILPH*LTVLVL
Trigger: TAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACC...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR TCA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR TCA 90 bp GGGAAGGAGGGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATGTAAGATCTGAAATTTaGACATCTGATCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GKEGKTQCNVKEMRDSPHVRSEI*TSDLCV
Trigger: CACACACAGATCAGATGTTCAAATTTCAGATCTTAC...ATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCCCTCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR GCA 90 bp AGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTGAGTCACTTACGTTTTTGCTGTaGTGGATCAGAGCGACAGTC +
Preference number: 4 (lower is better)
Translates to: SRQGRVEAPQFITTELESLTFLL*WIRATV
Trigger: GACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAG...TGACTCAAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCCTTACGTTTTTGCTGTaGTGGATCAGAGCGACAGTC +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAALTFLL*WIRATV
Trigger: GACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAG...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAATFLLC*IRATVS
Trigger: AGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGT...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CCA 90 bp GCTTCATCCTCACTCTACAAAGGGAGAAAGAAGACCAGCGTCCTTGGACTTCACAGCAACACTACAAGGTaGGTATTAGTATTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: ASSSLYKGRKKTSVLGLHSNTTR*VLVLSP
Trigger: CGGGGACAATACTAATACCCACCTTGTAGTGTTGCT...GTGAAGTCCAAGGACGCTGGTCTTCTTTCTCCCTTTGTAGAGTGAGGATGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp GTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: VASDYLALCQSGPTYLPPVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...TGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp TCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SPSRQGRVEAPQFITTELKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...AAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409319.5
3UTR CAA 72 bp CATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTaGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HLNFETKLPAII*HCVRVVPPTCL
Trigger: GAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp GTTCATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAAGAAAATCCAAGCGCTaGCAGCTCGGCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: VHLNFETKLPAIILHCVRRKSKR*QLGSEQ
Trigger: CTGTTCGGAGCCGAGCTGTCAGCGCTTGGATTTTCT...TCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR TCA 90 bp CACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HKRVRYLGTWGLVSARDIVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR GCA 90 bp CTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCCCGTTTTATCCCTTGCCCACAGCTTaGGCTCTCTTTCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: LNLHSNTTRWVLVLSPFYPLPTA*ALFHKR
Trigger: CCTCTTGTGAAAGAGAGCGCAAGCTGTGGGCAAGGG...ATAAAACGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp GTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCATTTTGAGACCAAGTTaGCAGCGATTATCTTGCATT +
Preference number: 4 (lower is better)
Translates to: VSVHPTSAQLTRPFCKAIILRPS*QRLSCI
Trigger: AATGCAAGATAATCGCTGGCAACTTGGTCTCAAAAT...GATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CCA 90 bp GATTATCTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCCCGAGGTACAGGAAGGCATaGTTTGACTTGGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DYLNLHSNTTRWVLVLSPRYRKA*FDLGWG
Trigger: TCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCT...CGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCTCAGGAGGGGAGTTCTaGAAAAACATGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCSGGEF*KNMHLK
Trigger: TTTCAAGTGCATGTTTTTCCAGAACTCCCCTCCTGA...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR TCA 90 bp TGTCTCCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: CLQELALPRKSGGEFWKNVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...GTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGGAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR TCA 90 bp TCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTTATAACAACAGAGCTTaGGTCAGTTCCAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: SPSRQGRVEAPQFITTELYNNRA*VSSKRM
Trigger: CATTCTTTTGGAACTGACTCAAGCTCTGTTGTTATA...AAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR GCA 90 bp AGAAAGAAGACCAGCGTCCTTGGACTTCACTCTCTGTGTGTTTGTTTCTGTCCAAAGATCTTACGTTTTTaGTGTGCTGGATCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: RKKTSVLGLHSLCVCFCPKILRF*CAGSER
Trigger: TCGCTCTGATCCAGCACAGCAAAAACGTAAGATCTT...TGGACAGAAACAAACACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR GCA 90 bp CTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCCCGTTTTATAGAAGCCACAGCTTGTaGTCTGGAGATGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LNLHSNTTRWVLVLSPFYRSHSL*SGDGSK
Trigger: CTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTCT...ATAAAACGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR TCA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCGTTCACACTTATTGGTaGAGATCTTACGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LESVPKECFPKASGGLGCVHTYW*RSYVFA
Trigger: AGCAAAAACGTAAGATCTTCACCAATAAGTGTGAAC...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR TCA 90 bp CTCATTTCAGAGCTCAGCATGGGCTGGAGTCATACTGAAAACCAGACGATAACCGTAAGATCTGAAATTTaGACATCTGATCTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LISELSMGWSHTENQTITVRSEI*TSDLCV
Trigger: CACACACAGATCAGATGTTCAAATTTCAGATCTTAC...GGTTATCGTCTGGTTTTCAGTATGACTCCAGCCCATGCTGAGCTCTGAAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR TCA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCTATAACAACAGAGCTTaGGTCAGTTCCAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAYNNRA*VSSKRM
Trigger: CATTCTTTTGGAACTGACTCAAGCTCTGTTGTTATA...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR GCA 90 bp GAGGATTATCTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCTGCCAGCGATTATCTTaGATTGTGTCAGAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: EDYLNLHSNTTRWVLVLSCQRLS*IVSEWS
Trigger: GGACCACTCTGACACAATGCAAGATAATCGCTGGCA...GGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp GCCCAGGGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: AQGPSTGCSWTASSCGSGVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...CCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp AGCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: STSKAFQRLPGRPPHHSRVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...GCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTAGGACGGAGATCGGGTaGTGGCTCTGCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GDLHITPACLCPPGCSGPRTEIG*WLCWER
Trigger: CCTCTCCCAGCAGAGCCACAACCCGATCTCCGTCCT...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCCCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAAGGACGGAGATCGGGTaGTGGCTCTGCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATRTEIG*WLCWER
Trigger: CCTCTCCCAGCAGAGCCACAACCCGATCTCCGTCCT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACACCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LTRPFCKAITGGAVQDGDVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...ATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCAGGACGGAGATCGGGTaGTGGCTCTGCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ARPSRGSQGDLHITPACLRTEIG*WLCWER
Trigger: CCTCTCCCAGCAGAGCCACAACCCGATCTCCGTCCT...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTCCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ALARPSRGSQGDLHITPAPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS GCA 90 bp GCAAGTGGAGGACTTGGCTGCCATTACCCTGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCATGGTCCAGTGGATGCCGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: ASGGLGCHYPARLVG*PSPEQSWSSGCRCL
Trigger: CAAGCACCGGCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CAA 90 bp CCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PRATSTSLPLVSALQGAPKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...CGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: GDLHITPACLCPPGCSGPTGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: GDLHITPACLCPPGCSGPSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACATGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATTGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGACGGAGATCGGGTaGTGGCTCTGCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTRTEIG*WLCWER
Trigger: CCTCTCCCAGCAGAGCCACAACCCGATCTCCGTCCT...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 5 (lower is better)
Translates to: GDLHITPACLCPPGCSGPLGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 5 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLLGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS GCA 90 bp GCTTCGAGCTGCGGCTCTGGGCCTTGGAACCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCACT +
Preference number: 5 (lower is better)
Translates to: ASSCGSGPWNLGFGF*QGHFQGPLQSFILT
Trigger: AGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGCCCAGAGCCGCAGCTCGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425849.1
CDS-3UTR CAA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGTGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTCTCACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: ARPSRGSQGDLHITPACLTGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...GAGACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CCAGGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACACTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 5 (lower is better)
Translates to: PGCSGPPLPVYPRGVRATLGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...TGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTCCTTCCTCCTGACAACTaGGAACCTGGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: ATSTSLPLVSALQGAPGLLPPDN*EPGVWF
Trigger: AAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAAG...GAGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp ATGCCGGTGCTTGATGCAGAAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATGTCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: MPVLDAEVSATAFTGQFHVLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGAC...ATGAAACTGACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCACCGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CAA 90 bp GCACAGGCTGCAGTTGGACGGCTTCGAGCTGCGGCTCTGGGCCTAGAGCAAAGAAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: AQAAVGRLRAAALGLEQRKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...TCTTTGCTCTAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNPTREQ*LAALFH
Trigger: ATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGG...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTCAGGAGAAGACCAGCGTCCTaGGACTTCACTCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: GPPLPVYPRGVRATVLLRRRPAS*DFTLCV
Trigger: CACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCT...CCTGAGGAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCAGAAGACCAGCGTCCTaGGACTTCACTCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLRRPAS*DFTLCV
Trigger: CACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCT...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp TCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTACCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SPSRQGRVEAPQFITTELTLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGGT...AAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS CCA 90 bp CTGCAGAGCTTCATCCTCACTCAGGCCATTCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LQSFILTQAILQSNH*RGCPGRRSGCGSAG
Trigger: CCCAGCAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGAGTGAGGATGAAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000289528.10
ENST00000409217.5
ENST00000409336.5
ENST00000444522.6
ENST00000464902.5
ENST00000469596.5
ENST00000475533.1
ENST00000621130.4
CDS CCA 90 bp TCGAGCTGCGGCTCTGGGCCTGCTGCCGCTGGTATTCTGCCTCACTaGCTGACAGTGCTTGTGCTAAAGCTAGGTCTTCTTCCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: SSCGSGPAAAGILPH*LTVLVLKLGLLPPD
Trigger: GTCAGGAGGAAGAAGACCTAGCTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACCAGCGGCAGCAGGCCCAGAGCCGCAGCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000475533.1
ENST00000621130.4
CDS-3UTR CAA 90 bp GGGTGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: GCSGPPLPVYPRGVRATVEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...GACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp CATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCTGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: HDEGAKSRAWPASTEGPTCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...GGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACAGAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: AITGGAVQDGDRVVALRQKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...CTGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCCTTCCTCCTGACAACTaGGAACCTGGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLLPPDN*EPGVWF
Trigger: AAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAAG...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTCTTCCTCCTGACAACTaGGAACCTGGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: ALARPSRGSQGDLHITPALPPDN*EPGVWF
Trigger: AAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAAG...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GCACTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTAGCGATTATCTTGCATaGTGTCAGAGTGGTCCCACC +
Preference number: 5 (lower is better)
Translates to: ALARPSRGSQGDLHITPASDYLA*CQSGPT
Trigger: GGTGGGACCACTCTGACACAATGCAAGATAATCGCT...AGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCACCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LSQFQKNASQKQVEDLAATLPGW*GAPPQS
Trigger: GCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGGT...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS TCA 90 bp AACGGGCAGGCCTACCTGCTGGGAGAGGTACAGGAAGGCATGGTTTaGCTTGGGCTGGGGACAGTGCTTGTAGAAGCCACAGCTTGTGCT +
Preference number: 5 (lower is better)
Translates to: NGQAYLLGEVQEGMV*LGLGTVLVEATACA
Trigger: AGCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCCCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000486734.5
CDS CCA 90 bp GCAGGCCTACCTGCTGGGAGAGGTACAGGAAGGCATGGTTTGACTTaGGCTGGGGACAGTGCTTGTAGAAGCCACAGCTTGTGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: AGLPAGRGTGRHGLT*AGDSACRSHSLCSG
Trigger: TCCAGAGCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGGTAGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000486734.5
CDS-3UTR CAA 90 bp GCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACAGTTGCTAGCCGCTCTCGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: AWPASTEGPTREQLLAALEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...GAGAGCGGCTAGCAACTGTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp GGCGACCTCCACATCACTCCCGCTTGTCTCTGCCCTCCAGGGTGCTCCGGGCCTGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: GDLHITPACLCPPGCSGPARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...AGGCCCGGAGCACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGGAGGTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp CTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTTGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQSNHWRGCPGRRSGCGSCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...AGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp GAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: EPGVWFLPGTFPGPAAELTGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...AAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS CCA 90 bp CTGCAGAGCTTCATCCTCACTCAGGCCATTCTGCAAAGCAATCACTaGAGGGGCTGTCCAGGACGGAGATCGGGTTGTGGCTCTACGACA +
Preference number: 5 (lower is better)
Translates to: LQSFILTQAILQSNH*RGCPGRRSGCGSTT
Trigger: TGTCGTAGAGCCACAACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGAGTGAGGATGAAGCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486734.5
CDS-3UTR CAA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCTACCTGGATATCCTTTaGGTAAGCAGATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLYLDIL*VSRSTV
Trigger: CACTGTGGATCTGCTTACCAAAAGGATATCCAGGTA...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp CTAGCAAGGCCTTCCAGAGGCTCCCAGGGCGACCTCCACATCACTCCCGCTTGTGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: LARPSRGSQGDLHITPACEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...ACAAGCGGGAGTGATGTGGAGGTCGCCCTGGGAGCCTCTGGAAGGCCTTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGTGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCAGGACGGAGATCGGGTaGTGGCTCTGCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VSVHPTSAQLTRPFCKAIRTEIG*WLCWER
Trigger: CCTCTCCCAGCAGAGCCACAACCCGATCTCCGTCCT...GATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CAA 90 bp GGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 5 (lower is better)
Translates to: GTLEPGVWFLPGTFPGPALGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...AGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp CTTCCTGCCCACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LPAHSTSGQLQHKGDDMMPTREQ*LAALFH
Trigger: ATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGG...CATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTGGGCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp GAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTGCTCTACGACAGACATaGAAGAGGTGGAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: EPGVWFLPGTFPGPAAELALRQT*KRWRSE
Trigger: CTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAGC...AAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp GAACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTAGAAGACCAGCGTCCTaGGACTTCACTCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: EPGVWFLPGTFPGPAAELRRPAS*DFTLCV
Trigger: CACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCT...AAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TGCTCCGGGCCTCCTCTCCCTGTGTACCCTAGAGGTGTGAGGGCCACAGTCCTCGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: CSGPPLPVYPRGVRATVLARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...GAGGACTGTGGCCCTCACACCTCTAGGGTACACAGGGAGAGGAGGCCCGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409336.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp AACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTTGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: NLCPTHQAILQSNHWRGCCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...ACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCACTCTACAAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: FLPGTFPGPAAELHPHSTKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...TGTAGAGTGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp ATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAGCCCTTGACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: ILHCVRVVPPTCLQTKPLTGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...CAAGGGCTTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACCACATCACTCCCGCTaGTCTCTGCCCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: FLSIQPLPNSPGHSAKQSPHHSR*SLPSRV
Trigger: CACCCTGGAGGGCAGAGACAAGCGGGAGTGATGTGG...TGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR CAA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGPTREQ*LAALFH
Trigger: ATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGG...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS CCA 90 bp CCTGAGCAGGCATCACACTTAAGCGGCAGAAAATCTGCAAAGAGTTaGTCGGATTGCAGGTCCAGCGGGACCTCGATGTCCTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PEQASHLSGRKSAKS*SDCRSSGTSMSFSL
Trigger: GAGAGAGAAGGACATCGAGGTCCCGCTGGACCTGCAATCCGACCAACTCTTTGCAGATTTTCTGCCGCTTAAGTGTGATGCCTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464902.5
ENST00000469596.5
ENST00000475533.1
CDS-3UTR CAA 90 bp GACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAAGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: DMMKGLRVGPGQHPLRAQEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...TTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp AAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCACTGAGGGCCCAACCAGGGAACGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: KGLRVGPGQHPLRAQPGNARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...GTTCCCTGGTTGGGCCCTCAGTGGATGCTGGCCAGGCCCTACTCTTAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp CACTCTCTGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: HSLCVCFCPSNLCPTHQATGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...GGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACAGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTAGGACGGAGATCGGGTaGTGGCTCTGCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: FETKLPAIILHCVRVVPPRTEIG*WLCWER
Trigger: CCTCTCCCAGCAGAGCCACAACCCGATCTCCGTCCT...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000448496.5
CDS-3UTR CAA 90 bp GTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTGCCGGCAGCCCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 5 (lower is better)
Translates to: VSATAFTGQFHHFSLPAALGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...GGCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CAA 90 bp GCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACTTGCCAGCGATTATCTaGCATTGTGTCAGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: AQLTRPFCKAITGGAVQDLPAII*HCVRVV
Trigger: GACCACTCTGACACAATGCAAGATAATCGCTGGCAA...GTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp CAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCCAGGACGGAGATCGGGTTTGCCAGCGATTATCTaGCATTGTGTCAGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: QAILQSNHWRGCPGRRSGLPAII*HCVRVV
Trigger: GACCACTCTGACACAATGCAAGATAATCGCTGGCAA...ACCCGATCTCCGTCCTGGACAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp CAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCATCTGATCTGTGTGTGTaGGGCCTCATGGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: QRLSCIVSEWSHLPASRPSDLCV*GLMVLS
Trigger: GCTCAGCACCATGAGGCCCAACACACACAGATCAGA...TGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp TGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGATCTGATCTGTGTGTGTaGGGCCTCATGGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: CQRLSCIVSEWSHLPASRSDLCV*GLMVLS
Trigger: GCTCAGCACCATGAGGCCCAACACACACAGATCAGA...TCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp ATACCTGCTGCCGCTGGTATTCTGCCTCACTGGCTGACAGTGCTTGTGCTAAAGAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: IPAAAGILPHWLTVLVLKSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...CTTTAGCACAAGCACTGTCAGCCAGTGAGGCAGAATACCAGCGGCAGCAGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp TGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGAAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: CQRLSCIVSEWSHLPASRSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...TCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTATGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp CACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTAAGGCATGGTTTGACTaGGGCTGGGGACAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: HKRVRYLGTWGLVSARDIKAWFD*GWGQCL
Trigger: CAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTT...AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTACTTCCTCCTGACAACTaGGAACCTGGGGTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLLPPDN*EPGVWF
Trigger: AAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAAG...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289528.10
ENST00000444522.6
ENST00000621130.4
CDS-3UTR CAA 90 bp TCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SQEGKVPWNLGFGFCQGHPTREQ*LAALFH
Trigger: ATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGG...ATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp AGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAAAGGACGGAGATCGGGTaGTGGCTCTACGACAGACAT +
Preference number: 5 (lower is better)
Translates to: SDYLALCQSGPTYLPPDQRTEIG*WLYDRH
Trigger: ATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCT...TTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp CACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATTAGGACGGAGATCGGGTaGTGGCTCTACGACAGACAT +
Preference number: 5 (lower is better)
Translates to: HKRVRYLGTWGLVSARDIRTEIG*WLYDRH
Trigger: ATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCT...AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp CCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCAGAAGACCAGCGTCCTaGGACTTCACTCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PSCQRLSCIVSEWSHLPARRPAS*DFTLCV
Trigger: CACACAGAGAGTGAAGTCCAAGGACGCTGGTCTTCT...GGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp GGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCATCCTCATTGGTGAAGATGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: GLVSARDISRARCRASSSLVKMF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACATCTTCACCAA...TGAGGATGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS TCA 90 bp AGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCGAACACATCTaGACATCAGAAGGGACAGACTCCACACGCGCCATCTTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SETTNPPEGRNSEHI*TSEGTDSTRAILRA
Trigger: AGCTCTTAAGATGGCGCGTGTGGAGTCTGTCCCTTCTGATGTTCAGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436556.5
CDS GCA 90 bp GCATCACACTTAAGCGGCAGAAAATCTGCAAAGAGTTGGTCGGATTaGAGGTCCAGCGGGACCTCGATGTCCTTCTCTCTCACTCAAGTC +
Preference number: 5 (lower is better)
Translates to: ASHLSGRKSAKSWSD*RSSGTSMSFSLTQV
Trigger: GACTTGAGTGAGAGAGAAGGACATCGAGGTCCCGCTGGACCTGCAATCCGACCAACTCTTTGCAGATTTTCTGCCGCTTAAGTGTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464902.5
ENST00000469596.5
CDS GCA 90 bp AAGCCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCTTACGTTTTTaGTGTGCTGGATCAGAGCGACAGTCTCTGTCAATGTGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: KPQLVLWRWQQVLRF*CAGSERQSLSMCSP
Trigger: GGGAGAGCACATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469596.5
CDS GCA 90 bp CCAGCTGGGTTGTGGCTGACCCCTACAATGTTTACCTTACGTTTTTaGTGTGCTGGATCAGAGCGACAGTCTCTGTCAATGTGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: PAGLWLTPTMFTLRF*CAGSERQSLSMCSP
Trigger: GGGAGAGCACATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAACCCAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS-3UTR CAA 90 bp ACCTGGGGTTTGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTCAGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: TWGLVSARDISRARCRASARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...TGAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp GTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAATGTAGAAGCCACAGCTaGTGCTCTGGAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: VFVSVHPTSAQLTRPFCKCRSHS*CSGDGS
Trigger: GCTGCCATCTCCAGAGCACAAGCTGTGGCTTCTACA...TTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TGTGTGTTTGTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 5 (lower is better)
Translates to: CVFVSVHPTSAQLTRPFCLGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...GCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAACAAACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp GTTTCTGTCCATCCAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATT +
Preference number: 5 (lower is better)
Translates to: VSVHPTSAQLTRPFCKAILGTWG*VSARDI
Trigger: AATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAG...GATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTGGATGGACAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp GGGAAGACACAGTGCAACGTCAAGGAAATGAGGGACAGCCCTCATTTCAGAGCTGCTCTACGACAGACATaGAAGAGGTGGAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GKTQCNVKEMRDSPHFRAALRQT*KRWRSE
Trigger: CTCTGACCTCCACCTCTTCAATGTCTGTCGTAGAGC...AGCTCTGAAATGAGGGCTGTCCCTCATTTCCTTGACGTTGCACTGTGTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409594.5
CDS-3UTR CAA 90 bp CAACCTCTGCCCAACTCACCAGGCCATTCTGCAAAGCAATCACTGGAGGGGCTGTCACTCTCTGTGTGTTaGTTTCTGTCCATCCAACCT +
Preference number: 5 (lower is better)
Translates to: QPLPNSPGHSAKQSLEGLSLSVC*FLSIQP
Trigger: AGGTTGGATGGACAGAAACAAACACACAGAGAGTGA...CAGCCCCTCCAGTGATTGCTTTGCAGAATGGCCTGGTGAGTTGGGCAGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp AGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGCGATTATCTTGCATaGTGTCAGAGTGGTCCCACC +
Preference number: 5 (lower is better)
Translates to: SCQRLSCIVSEWSHLPASSDYLA*CQSGPT
Trigger: GGTGGGACCACTCTGACACAATGCAAGATAATCGCT...GGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGAAGCGATTATCTTGCATaGTGTCAGAGTGGTCCCACC +
Preference number: 5 (lower is better)
Translates to: CQRLSCIVSEWSHLPASRSDYLA*CQSGPT
Trigger: GGTGGGACCACTCTGACACAATGCAAGATAATCGCT...TCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp AAAGACTCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAAAGCAAGTGGAGGACTaGGCTGCCATTACCCTGCCC +
Preference number: 5 (lower is better)
Translates to: KDSPSRQGRVEAPQFITTKQVED*AAITLP
Trigger: GGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGCTT...TGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGAGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CAA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCAAGCAAGTGGAGGACTaGGCTGCCATTACCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LESVPKECFPKASGGLGCKQVED*AAITLP
Trigger: GGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGCTT...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS CCA 90 bp ACAGGTACCTGGATATCCTGTAGTCAAGGAGCAAGGGTCAGTCTGTaGCCCACTCCAGTCCAACAAATCTCTGGTCCTGAAAGAACTTGG +
Preference number: 5 (lower is better)
Translates to: TGTWISCSQGARVSL*PTPVQQISGPERTW
Trigger: CCAAGTTCTTTCAGGACCAGAGATTTGTTGGACTGGAGTGGGCCACAGACTGACCCTTGCTCCTTGACTACAGGATATCCAGGTACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476713.5
ENST00000489197.1
CDS CCA 90 bp GTTGTGGCTGACCCCTACAATGTTTACCTTACGTTTTTGCTGTGCTaGATCAGAGCGACAGTCTCTGTCAATGTGCTCTCCCACAGCACG +
Preference number: 5 (lower is better)
Translates to: VVADPYNVYLTFLLC*IRATVSVNVLSHST
Trigger: CGTGCTGTGGGAGAGCACATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS-3UTR CAA 90 bp CACTCCACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTATACCTGGATATCCTTTaGGTAAGCAGATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: HSTSGQLQHKGDDMMKGLYLDIL*VSRSTV
Trigger: CACTGTGGATCTGCTTACCAAAAGGATATCCAGGTA...TAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGTGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp TGCAGAAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTGCCAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: CRSFGYSVHRSVSSFLAASGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...GGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAACTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CAA 90 bp CTTTCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGAAGCGATTATCTTGCATaGTGTCAGAGTGGTCCCACC +
Preference number: 5 (lower is better)
Translates to: LSQEGKVPWNLGFGFCQGSDYLA*CQSGPT
Trigger: GGTGGGACCACTCTGACACAATGCAAGATAATCGCT...TCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS GCA 90 bp AAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCACACTTATTGGTGAAGATCTTACGT +
Preference number: 5 (lower is better)
Translates to: KFRLQRSQVSFIISR*RQPARSHLLVKILR
Trigger: ACGTAAGATCTTCACCAATAAGTGTGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409206.5
ENST00000409217.5
ENST00000409319.5
ENST00000409336.5
ENST00000409412.5
ENST00000409594.5
ENST00000422255.5
ENST00000444522.6
ENST00000464902.5
ENST00000475533.1
CDS GCA 90 bp AAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCACACTTATTGGTGAAGATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: KFRLQRSQVSFIISR*RQPARSHLLVKIFW
Trigger: CCAAAAGATCTTCACCAATAAGTGTGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486734.5
ENST00000621130.4
CDS CCA 90 bp ATTAGCTGTTTGGGTTTCCAGGCATCCGTAGTCCCAGCTGGGTTGTaGCTGACCCCTACAATGTTTACCTTACGTTTTTGCTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ISCLGFQASVVPAGL*LTPTMFTLRFCCAG
Trigger: TCCAGCACAGCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAACCCAGCTGGGACTACGGATGCCTGGAAACCCAAACAGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS-3UTR CAA 90 bp TCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: SGQLQHKGDDMMKGLRVGARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...CCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409594.5
ENST00000444522.6
CDS-3UTR CAA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: LSQFQKNASQKQVEDLAASGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CAA 90 bp GTGCTGAGCACTGCTGAGGATTATCTCAATCTTCATAGCAACACTACAAGGTGGCCAACCAGGGAACAGTaGCTAGCCGCTCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: VLSTAEDYLNLHSNTTRWPTREQ*LAALFH
Trigger: ATGGAAGAGAGCGGCTAGCAACTGTTCCCTGGTTGG...CCACCTTGTAGTGTTGCTATGAAGATTGAGATAATCCTCAGCAGTGCTCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS-3UTR CAA 90 bp AGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAATTGCCAGCGATTATCTaGCATTGTGTCAGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: SDYLALCQSGPTYLPPDQLPAII*HCVRVV
Trigger: GACCACTCTGACACAATGCAAGATAATCGCTGGCAA...TTGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp ACATCGGGGCAGCTCCAGCATAAGGGAGATGACATGATGAAGGGGCTAAGAGTATTGCCAGCGATTATCTaGCATTGTGTCAGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: TSGQLQHKGDDMMKGLRVLPAII*HCVRVV
Trigger: GACCACTCTGACACAATGCAAGATAATCGCTGGCAA...TACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGAGCTGCCCCGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409097.5
ENST00000409594.5
CDS GCA 90 bp AAGTTTCGGCTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCACACTTATTGGTGAAGATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: KFRLQRSQVSFIISR*RQPARSHLLVKMFL
Trigger: CAAAAACATCTTCACCAATAAGTGTGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAGCCGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448496.5
ENST00000468301.1
CDS-3UTR CAA 90 bp GACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGTACCTGGATATCCTTTaGGTAAGCAGATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: DQVASDYLALCQSGPTYLYLDIL*VSRSTV
Trigger: CACTGTGGATCTGCTTACCAAAAGGATATCCAGGTA...CAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TCCCCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: SPSRQGRVEAPQFITTELEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...AAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CAA 90 bp CAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGCCTCCAGACCAGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: QRLSCIVSEWSHLPASRPARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...TGGTCTGGAGGCAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp GACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTACCTGTCACTCTCTGTGTGTTaGTTTCTGTCCATCCAACCT +
Preference number: 5 (lower is better)
Translates to: DQVASDYLALCQSGPTYLSLSVC*FLSIQP
Trigger: AGGTTGGATGGACAGAAACAAACACACAGAGAGTGA...CAGGTAGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp TCACAAGAGGGTAAGGTACCTTGGAACCTGGGGTTTGGTTTCTGCCAGGGACATGCGCGTTCACACTTATaGGTGAAGATGTTTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SQEGKVPWNLGFGFCQGHARSHL*VKMFLL
Trigger: CAGCAAAAACATCTTCACCAATAAGTGTGAACGCGC...ATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGTACCTTACCCTCTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448496.5
CDS-3UTR CAA 90 bp CATAAGGGAGATGACATGATGAAGGGGCTAAGAGTAGGGCCTGGCCAGCATCCAATTGGTGAAGATCTTTaGGTAAGCAGATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: HKGDDMMKGLRVGPGQHPIGEDL*VSRSTV
Trigger: CACTGTGGATCTGCTTACCAAAAGATCTTCACCAAT...TGGATGCTGGCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621130.4
CDS-3UTR CAA 90 bp TTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGAGTGGTCCCACCTGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: FETKLPAIILHCVRVVPPEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...AGGTGGGACCACTCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CAA 90 bp GCTTCATCCTCACTCTACAAAGGGAGAAAGAAGACCAGCGTCCTTGGACTTCACTCACTCTCTGTGTGTTaGTTTCTGTCCATCCAACCT +
Preference number: 5 (lower is better)
Translates to: ASSSLYKGRKKTSVLGLHSLSVC*FLSIQP
Trigger: AGGTTGGATGGACAGAAACAAACACACAGAGAGTGA...GTGAAGTCCAAGGACGCTGGTCTTCTTTCTCCCTTTGTAGAGTGAGGATGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS-3UTR CAA 90 bp AGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTGAGTCATACCTGGATATCCTTTaGGTAAGCAGATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: SRQGRVEAPQFITTELESYLDIL*VSRSTV
Trigger: CACTGTGGATCTGCTTACCAAAAGGATATCCAGGTA...TGACTCAAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CAA 90 bp TTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCCTACCTGGATATCCTTTaGGTAAGCAGATCCACAGTG +
Preference number: 5 (lower is better)
Translates to: LSQFQKNASQKQVEDLAAYLDIL*VSRSTV
Trigger: CACTGTGGATCTGCTTACCAAAAGGATATCCAGGTA...GGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CAA 90 bp CCTAGCCGACAGGGTAGGGTTGAAGCTCCCCAATTTATAACAACAGAGCTTGAGGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: PSRQGRVEAPQFITTELEARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...CTCAAGCTCTGTTGTTATAAATTGGGGAGCTTCAACCCTACCCTGTCGGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CAA 90 bp TGTCTCCAAGAACTAGCCTTACCCAGGAAGTCAGGAGGGGAGTTCTGGAAAAACAGGGAAGAGAGATTTTaGGCATGTCTCCAAGAACTA +
Preference number: 5 (lower is better)
Translates to: CLQELALPRKSGGEFWKNREERF*ACLQEL
Trigger: TAGTTCTTGGAGACATGCCAAAAATCTCTCTTCCCT...GTTTTTCCAGAACTCCCCTCCTGACTTCCTGGGTAAGGCTAGTTCTTGGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409319.5
CDS-3UTR CAA 90 bp CTTGAGTCAGTTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTGCGCGCGTTCACACTTATaGGTGAAGATCTTACGTTTT +
Preference number: 5 (lower is better)
Translates to: LESVPKECFPKASGGLGCARSHL*VKILRF
Trigger: AAAACGTAAGATCTTCACCAATAAGTGTGAACGCGC...GCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAACTGACTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS-3UTR CAA 90 bp CTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCCCGTTTTATACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGT +
Preference number: 5 (lower is better)
Translates to: LNLHSNTTRWVLVLSPFYTGRHG*TWAGDS
Trigger: ACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGT...ATAAAACGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp GAGGATTATCTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCAGTGGATGCCGGTGCTaGATGCAGAAGTTTCGGCTA +
Preference number: 5 (lower is better)
Translates to: EDYLNLHSNTTRWVLVLSSGCRC*MQKFRL
Trigger: TAGCCGAAACTTCTGCATCAAGCACCGGCATCCACT...GGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp GATTATCTCAATCTTCATAGCAACACTACAAGGTGGGTATTAGTATTGTCCCCGGAAGATCTTACGTTTTaGCTGTGCTGGATCAGAGCG +
Preference number: 5 (lower is better)
Translates to: DYLNLHSNTTRWVLVLSPEDLTF*LCWIRA
Trigger: CGCTCTGATCCAGCACAGCAAAAACGTAAGATCTTC...CGGGGACAATACTAATACCCACCTTGTAGTGTTGCTATGAAGATTGAGATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
CDS-3UTR CAA 90 bp GTTCATCTTAATTTTGAGACCAAGTTGCCAGCGATTATCTTGCATTGTGTCAGATCACTCTCTGTGTGTTaGTTTCTGTCCATCCAACCT +
Preference number: 5 (lower is better)
Translates to: VHLNFETKLPAIILHCVRSLSVC*FLSIQP
Trigger: AGGTTGGATGGACAGAAACAAACACACAGAGAGTGA...TCTGACACAATGCAAGATAATCGCTGGCAACTTGGTCTCAAAATTAAGATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409097.5
ENST00000409206.5
ENST00000409594.5
ENST00000448496.5
CDS GCA 72 bp GGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTaGGGCTCTGGGCCTGCTGCCGCTGGTATTCTGCCT +
Preference number: 6 (lower is better)
Translates to: GPSTGCSWTASS*GSGPAAAGILP
Trigger: AGGCAGAATACCAGCGGCAGCAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000475533.1
ENST00000621130.4
CDS GCA 72 bp GGACTTGGCTGCCATTACCCTGCCCGGCTGGTTGGGTaGCCCTCCCCAGAGCAATCATGGTCCAGTGGATGC +
Preference number: 6 (lower is better)
Translates to: GLGCHYPARLVG*PSPEQSWSSGC
Trigger: GCATCCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS GCA 72 bp GGCCCTAGCACAGGCTGCAGTTGGACGGCTTCGAGCTaGGGCTCTGGGCCTTGGAACCTGGGGTTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: GPSTGCSWTASS*GSGPWNLGFGF
Trigger: GAAACCAAACCCCAGGTTCCAAGGCCCAGAGCCGCAGCTCGAAGCCGTCCAACTGCAGCCTGTGCTAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425849.1
CDS CCA 72 bp TGGAGGACTTGGCTGCCATTACCCTGCCCGGCTGGTTaGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTGG +
Preference number: 6 (lower is better)
Translates to: WRTWLPLPCPAG*VPLPRAIMVQW
Trigger: CCACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS CAA 72 bp GTGGAGGACTTGGCTGCCATTACCCTGCCCGGCTGGTaGGGTGCCCCTCCCCAGAGCAATCATGGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: VEDLAAITLPGW*GAPPQSNHGPV
Trigger: CACTGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS CAA 72 bp CTTCGAGCTGCGGCTCTGGGCCTTGGAACCTGGGGTTaGGTTTCTGCCAGGGACATTTCCAGGGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LRAAALGLGTWG*VSARDISRARC
Trigger: GCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGGCCCAGAGCCGCAGCTCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425849.1
CDS CCA 72 bp CAAGTGGAGGACTTGGCTGCCATTACCCTGCCCGGCTaGTTGGGTGCCCCTCCCCAGAGCAATCATGGTCCA +
Preference number: 6 (lower is better)
Translates to: QVEDLAAITLPG*LGAPPQSNHGP
Trigger: TGGACCATGATTGCTCTGGGGAGGGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS GCA 72 bp TGCTGTGCTGGATCAGAGCGACAGTCTCTGTCAATGTaGTCTCCCACAGCACGGTCAGGGGGCTCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: CCAGSERQSLSM*SPTARSGGSPL
Trigger: CAGAGGGGAGCCCCCTGACCGTGCTGTGGGAGAGCACATTGACAGAGACTGTCGCTCTGATCCAGCACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409206.5
ENST00000409217.5
ENST00000409319.5
ENST00000409336.5
ENST00000409412.5
ENST00000409594.5
ENST00000422255.5
ENST00000444522.6
ENST00000448496.5
ENST00000464902.5
ENST00000468301.1
ENST00000469596.5
ENST00000475533.1
ENST00000476713.5
ENST00000489197.1
CDS CCA 72 bp AAAAGGGGGAGCAGGGAAACGGGCAGGCCTACCTGCTaGGAGAGGTACAGGAAGGCATGGTTTGACTTGGGC +
Preference number: 6 (lower is better)
Translates to: KRGSRETGRPTC*ERYRKAWFDLG
Trigger: GCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCCCGTTTCCCTGCTCCCCCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000486734.5
CDS CAA 90 bp AAACGGGCAGGCCTACCTGCTGGGAGAGGTACAGGAAGGCATGGTTaGACTTGGGCTGGGGACAGTGCTTGTAGAAGCCACAGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: KRAGLPAGRGTGRHG*TWAGDSACRSHSLC
Trigger: GCACAAGCTGTGGCTTCTACAAGCACTGTCCCCAGCCCAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCCCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000486734.5
CDS GCA 72 bp GGAAAAAGGGGGAGCAGGGAAACGGGCAGGCCTACCTaGTGGGAGAGGTACAGGAAGGCATGGTTTGACTTG +
Preference number: 6 (lower is better)
Translates to: GKRGSRETGRPT*WERYRKAWFDL
Trigger: CAAGTCAAACCATGCCTTCCTGTACCTCTCCCAGCAGGTAGGCCTGCCCGTTTCCCTGCTCCCCCTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409206.5
ENST00000409594.5
ENST00000486734.5
CDS GCA 72 bp AAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTGGCTaGCATTACCCTGCCCGGCTGGTTGGGTGCCCCTCC +
Preference number: 6 (lower is better)
Translates to: KECFPKASGGLG*HYPARLVGCPS
Trigger: GGAGGGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS GCA 72 bp AGGTCCGGAAACTCCATCGCCAAGCCGGGCAGGGTCTaGTCAGAGACCCCAGCGACCACGATAAAAGTGAAT +
Preference number: 6 (lower is better)
Translates to: RSGNSIAKPGRV*SETPATTIKVN
Trigger: ATTCACTTTTATCGTGGTCGCTGGGGTCTCTGAGCAGACCCTGCCCGGCTTGGCGATGGAGTTTCCGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436556.5
CDS GCA 72 bp TTCCTCCTGACAACTTGGAACCTGGGGTTTGGTTTCTaGCAGGGACATTTCCAGGGCCCGCTGCAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: FLLTTWNLGFGF*QGHFQGPLQSF
Trigger: GAAGCTCTGCAGCGGGCCCTGGAAATGTCCCTGGCAGAAACCAAACCCCAGGTTCCAAGTTGTCAGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289528.10
ENST00000409336.5
ENST00000444522.6
ENST00000475533.1
ENST00000621130.4
CDS CCA 72 bp TCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTTaGCTGCCATTACCCTGCCCGGCTGGTTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: SKRMLPKSKWRT*LPLPCPAGWVP
Trigger: GGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS CAA 72 bp TTCCAAAAGAATGCTTCCCAAAAGCAAGTGGAGGACTaGGCTGCCATTACCCTGCCCGGCTGGTTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: FQKNASQKQVED*AAITLPGWLGA
Trigger: GGCACCCAACCAGCCGGGCAGGGTAATGGCAGCCAAGTCCTCCACTTGCTTTTGGGAAGCATTCTTTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409319.5
ENST00000409412.5
CDS CCA 72 bp GCATCACACTTAAGCGGCAGAAAATCTGCAAAGAGTTaGTCGGATTGCAGGTCCAGCGGGACCTCGATGTCC +
Preference number: 6 (lower is better)
Translates to: ASHLSGRKSAKS*SDCRSSGTSMS
Trigger: GGACATCGAGGTCCCGCTGGACCTGCAATCCGACCAACTCTTTGCAGATTTTCTGCCGCTTAAGTGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464902.5
ENST00000469596.5
ENST00000475533.1
CDS CAA 72 bp GGCATCACACTTAAGCGGCAGAAAATCTGCAAAGAGTaGGTCGGATTGCAGGTCCAGCGGGACCTCGATGTC +
Preference number: 6 (lower is better)
Translates to: GITLKRQKICKE*VGLQVQRDLDV
Trigger: GACATCGAGGTCCCGCTGGACCTGCAATCCGACCAACTCTTTGCAGATTTTCTGCCGCTTAAGTGTGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464902.5
ENST00000469596.5
ENST00000475533.1
CDS TCA 72 bp CGGCAGCCAGCGCGTTCACACTTATTGGTGAAGATCTaGGGTGAAGTGAGAAGGTTGTCTCTGCTGAGACTC +
Preference number: 6 (lower is better)
Translates to: RQPARSHLLVKI*GEVRRLSLLRL
Trigger: GAGTCTCAGCAGAGACAACCTTCTCACTTCACCTCAGATCTTCACCAATAAGTGTGAACGCGCTGGCTGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS GCA 72 bp CTACAGCGTTCACAGGTCAGTTTCATCATTTCTCGCTaGCGGCAGCCAGCGCGTTCACACTTATTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: LQRSQVSFIISR*RQPARSHLLVK
Trigger: CTTCACCAATAAGTGTGAACGCGCTGGCTGCCGGCAGCGAGAAATGATGAAACTGACCTGTGAACGCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000289528.10
ENST00000409097.5
ENST00000409206.5
ENST00000409217.5
ENST00000409319.5
ENST00000409336.5
ENST00000409412.5
ENST00000409594.5
ENST00000422255.5
ENST00000444522.6
ENST00000448496.5
ENST00000464902.5
ENST00000468301.1
ENST00000475533.1
ENST00000486734.5
ENST00000489197.1
ENST00000621130.4
CDS GCA 72 bp TTAAGCGGCAGAAAATCTGCAAAGAGTTGGTCGGATTaGAGGTCCAGCGGGACCTCGATGTCCTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LSGRKSAKSWSD*RSSGTSMSFSL
Trigger: GAGAGAGAAGGACATCGAGGTCCCGCTGGACCTGCAATCCGACCAACTCTTTGCAGATTTTCTGCCGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464902.5
ENST00000469596.5
ENST00000475533.1
CDS CAA 72 bp GAGAAGGTTGTCTCTGCTGAGACTCTGATTAGCTGTTaGGGTTTCCAGGCATCCGTAGTCCCAGCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: EKVVSAETLISC*GFQASVVPAGL
Trigger: CAACCCAGCTGGGACTACGGATGCCTGGAAACCCAAACAGCTAATCAGAGTCTCAGCAGAGACAACCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS CAA 90 bp GGCATCACACTTAAGCGGCAGAAAATCTGCAAAGAGTTGGTCGGATaGCAGGTCCAGCGGGACCTCGATGTCCTTCTCTCTCACTCAAGT +
Preference number: 6 (lower is better)
Translates to: GITLKRQKICKELVG*QVQRDLDVLLSHSS
Trigger: ACTTGAGTGAGAGAGAAGGACATCGAGGTCCCGCTGGACCTGCAATCCGACCAACTCTTTGCAGATTTTCTGCCGCTTAAGTGTGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464902.5
ENST00000469596.5
ENST00000475533.1
CDS CAA 90 bp GAAGCCACAGCTTGTGCTCTGGAGATGGCAGCAAGTCTTACGTTTTaGCTGTGCTGGATCAGAGCGACAGTCTCTGTCAATGTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: EATACALEMAASLTF*LCWIRATVSVNVLS
Trigger: GGAGAGCACATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGACTTGCTGCCATCTCCAGAGCACAAGCTGTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469596.5
CDS CAA 90 bp CCCAGCTGGGTTGTGGCTGACCCCTACAATGTTTACCTTACGTTTTaGCTGTGCTGGATCAGAGCGACAGTCTCTGTCAATGTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: PSWVVADPYNVYLTF*LCWIRATVSVNVLS
Trigger: GGAGAGCACATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAACCCAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS GCA 72 bp GCCATCTTAAGAGCTGTAACACTCACCGCGAGGGTCTaGGGCTTCATTCTTGAAGTCAGTGAGACCAAGAAC +
Preference number: 6 (lower is better)
Translates to: AILRAVTLTARV*GFILEVSETKN
Trigger: GTTCTTGGTCTCACTGACTTCAAGAATGAAGCCGCAGACCCTCGCGGTGAGTGTTACAGCTCTTAAGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436556.5
CDS CCA 72 bp TGGATATCCTGTAGTCAAGGAGCAAGGGTCAGTCTGTaGCCCACTCCAGTCCAACAAATCTCTGGTCCTGAA +
Preference number: 6 (lower is better)
Translates to: WISCSQGARVSL*PTPVQQISGPE
Trigger: TTCAGGACCAGAGATTTGTTGGACTGGAGTGGGCCACAGACTGACCCTTGCTCCTTGACTACAGGATATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476713.5
ENST00000489197.1
CDS CCA 72 bp TTGGGTTTCCAGGCATCCGTAGTCCCAGCTGGGTTGTaGCTGACCCCTACAATGTTTACCTTACGTTTTTGC +
Preference number: 6 (lower is better)
Translates to: LGFQASVVPAGL*LTPTMFTLRFC
Trigger: GCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAACCCAGCTGGGACTACGGATGCCTGGAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS CAA 90 bp CTGATTAGCTGTTTGGGTTTCCAGGCATCCGTAGTCCCAGCTGGGTaGTGGCTGACCCCTACAATGTTTACCTTACGTTTTTGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: LISCLGFQASVVPAG*WLTPTMFTLRFCCA
Trigger: AGCACAGCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAACCCAGCTGGGACTACGGATGCCTGGAAACCCAAACAGCTAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS TCA 72 bp TCTGTGGCCCACTCCAGTCCAACAAATCTCTGGTCCTaGAAGAACTTGGATATGACCCACCACAAACACGCA +
Preference number: 6 (lower is better)
Translates to: SVAHSSPTNLWS*KNLDMTHHKHA
Trigger: TGCGTGTTTGTGGTGGGTCATATCCAAGTTCTTTCAGGACCAGAGATTTGTTGGACTGGAGTGGGCCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476713.5
ENST00000489197.1
CDS GCA 72 bp CTTGTGCTCTGGAGATGGCAGCAAGTCTTACGTTTTTaGTGTGCTGGATCAGAGCGACAGTCTCTGTCAATG +
Preference number: 6 (lower is better)
Translates to: LVLWRWQQVLRF*CAGSERQSLSM
Trigger: CATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGACTTGCTGCCATCTCCAGAGCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469596.5
CDS CAA 72 bp GCTTGTGCTCTGGAGATGGCAGCAAGTCTTACGTTTTaGCTGTGCTGGATCAGAGCGACAGTCTCTGTCAAT +
Preference number: 6 (lower is better)
Translates to: ACALEMAASLTF*LCWIRATVSVN
Trigger: ATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGACTTGCTGCCATCTCCAGAGCACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469596.5
CDS CAA 72 bp TGTTTGGGTTTCCAGGCATCCGTAGTCCCAGCTGGGTaGTGGCTGACCCCTACAATGTTTACCTTACGTTTT +
Preference number: 6 (lower is better)
Translates to: CLGFQASVVPAG*WLTPTMFTLRF
Trigger: AAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAACCCAGCTGGGACTACGGATGCCTGGAAACCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS GCA 72 bp TTGTGGCTGACCCCTACAATGTTTACCTTACGTTTTTaGTGTGCTGGATCAGAGCGACAGTCTCTGTCAATG +
Preference number: 6 (lower is better)
Translates to: LWLTPTMFTLRF*CAGSERQSLSM
Trigger: CATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS CAA 72 bp GTTGTGGCTGACCCCTACAATGTTTACCTTACGTTTTaGCTGTGCTGGATCAGAGCGACAGTCTCTGTCAAT +
Preference number: 6 (lower is better)
Translates to: VVADPYNVYLTF*LCWIRATVSVN
Trigger: ATTGACAGAGACTGTCGCTCTGATCCAGCACAGCAAAAACGTAAGGTAAACATTGTAGGGGTCAGCCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489197.1
CDS TCA 72 bp CATATAACCAGAGGGTACTATCAGTTAGATCAGTGGTaGTCCACCAGGGCAATTTTGCCTCCAGGGGATATT +
Preference number: 6 (lower is better)
Translates to: HITRGYYQLDQW*STRAILPPGDI
Trigger: AATATCCCCTGGAGGCAAAATTGCCCTGGTGGATCACCACTGATCTAACTGATAGTACCCTCTGGTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436556.5
CDS CAA 72 bp TCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATaGCGGACACAAGCTCATTTTAGATGCCTCCTGCTT +
Preference number: 6 (lower is better)
Translates to: SFLKSVRPRTHQ*RTQAHFRCLLL
Trigger: AAGCAGGAGGCATCTAAAATGAGCTTGTGTCCGCAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436556.5
CDS GCA 72 bp AGAACCCACCAATTGCGGACACAAGCTCATTTTAGATaGCTCCTGCTTCCAAGTTTAGCAGTTTTCCCATAT +
Preference number: 6 (lower is better)
Translates to: RTHQLRTQAHFR*LLLPSLAVFPY
Trigger: ATATGGGAAAACTGCTAAACTTGGAAGCAGGAGGCATCTAAAATGAGCTTGTGTCCGCAATTGGTGGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436556.5