RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZEB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169554

Ensembl transcript IDs: ENST00000303660.8, ENST00000392861.6, ENST00000409211.5, ENST00000409487.7, ENST00000419938.5, ENST00000427902.5, ENST00000431672.4, ENST00000434448.5, ENST00000435831.5, ENST00000440875.6, ENST00000444559.5, ENST00000453352.5, ENST00000461784.3, ENST00000462355.2, ENST00000465070.5, ENST00000465308.5, ENST00000470879.5, ENST00000472146.5, ENST00000476394.5, ENST00000479735.1, ENST00000484313.3, ENST00000497268.1, ENST00000539609.7, ENST00000558170.6, ENST00000625161.1, ENST00000627532.3, ENST00000628473.1, ENST00000629520.2, ENST00000629955.1, ENST00000630572.2, ENST00000636026.2, ENST00000636179.1, ENST00000636413.1, ENST00000636445.1, ENST00000636471.1, ENST00000636732.2, ENST00000636820.1, ENST00000637045.1, ENST00000637267.2, ENST00000637304.1, ENST00000638007.1, ENST00000638087.1, ENST00000638128.1, ENST00000639389.1, ENST00000675069.1, ENST00000675145.1

Found 1435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCCAGGACCCGCTGCCCGAATCAGGGGCAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGCACCGGTGGCAAGCAGCAGCAGGGC +
Preference number: 1 (lower is better)
Translates to: IPGPAARIRGKSNKL*KLQTGRTGGKQQQG
Trigger: GCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR CCA 90 bp AGCTTGGCTCACGTGTGGGGAGGACTCATGGTTGGGCACACTAGCTaGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGTCATCCTC +
Preference number: 1 (lower is better)
Translates to: SLAHVWGGLMVGHTS*TRLLVQRVGNTVIL
Trigger: GAGGATGACGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR CCA 90 bp GGGCAAAAGCAACAAACTTTGCAAGTTACAAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTGCTCATTTCT +
Preference number: 1 (lower is better)
Translates to: GQKQQTLQVTNGPHR*QAAAGHLPLRVLIS
Trigger: AGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR CCA 90 bp ATTGGCCTCTGGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGAT +
Preference number: 1 (lower is better)
Translates to: IGLWRAKARQLLRGF*VNNGCVTALKVLLD
Trigger: ATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 90 bp TGGAGTTCCAGGTGGCAGGTCATTTTCTTCTTGCCCATTGGCCTCTaGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTCTGGGTAAAT +
Preference number: 1 (lower is better)
Translates to: WSSRWQVIFFLPIGL*RAKARQLLRGFWVN
Trigger: ATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTGCCACCTGGAACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 90 bp GATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTaGGGTAGGCAAACGTGTAGCTACAGAGAGGGCAGGAAAAGTTCT +
Preference number: 1 (lower is better)
Translates to: DLSLACVSPYAARAG*GRQTCSYREGRKSS
Trigger: AGAACTTTTCCTGCCCTCTCTGTAGCTACACGTTTGCCTACCGCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 90 bp TTCATCTTCCTCTTCCTCTCTTGGCAACAGAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGGCACACTAGCTGGACTCGTCTCCTG +
Preference number: 1 (lower is better)
Translates to: FIFLFLSWQQSLAHV*GGLMVGHTSWTRLL
Trigger: CAGGAGACGAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR CCA 90 bp CCCTCCCTTATTTCATCTTCCTCTTCCTCTCTTGGCAACAGAGCTTaGCTCACGTGTGGGGAGGACTCATGGTTGGGCACACTAGCTGGA +
Preference number: 1 (lower is better)
Translates to: PSLISSSSSSLGNRA*LTCGEDSWLGTLAG
Trigger: TCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAGATGAAATAAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR GCA 90 bp GGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTaGCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCT +
Preference number: 1 (lower is better)
Translates to: GYLWSALRTGTCHTT*PSALKVSKTGSLEA
Trigger: AGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 90 bp CAGGAGACCTGGGTAATAAAGAGTCTTTTGTGGGAGGGTTACTGTTaGGAGCTAACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGG +
Preference number: 1 (lower is better)
Translates to: QETWVIKSLLWEGYC*ELTAWSFFPGMGTW
Trigger: CCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGACTCTTTATTACCCAGGTCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 90 bp AAGGATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTaGCACACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGC +
Preference number: 1 (lower is better)
Translates to: KDGDGYLWSALRTGT*HTTCPSALKVSKTG
Trigger: GCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR GCA 90 bp TCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTTTTT +
Preference number: 1 (lower is better)
Translates to: SWWTVTLWTPAAYWL*YEGKHVSTPIGLVF
Trigger: AAAAACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 90 bp ATAAAGAGTCTTTTGTGGGAGGGTTACTGTTGGGAGCTAACGGCTTaGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGT +
Preference number: 1 (lower is better)
Translates to: IKSLLWEGYCWELTA*SFFPGMGTWNLSTG
Trigger: ACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGACTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 90 bp ATTTCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: ISSGPSTEACRISLL*QGCSTPPSLISSSS
Trigger: AGAGGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR GCA 90 bp AATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTGACTaGATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCAAAGTATTC +
Preference number: 1 (lower is better)
Translates to: NNGCVTALKVLLDAD*MTIAFLQFSFGKVF
Trigger: GAATACTTTGCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 90 bp TGTTGGGAGCTAACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTaGAATTTGAGTACTGGTAGACTTTTCGTTGTTCAAACCATTCCT +
Preference number: 1 (lower is better)
Translates to: CWELTAWSFFPGMGT*NLSTGRLFVVQTIP
Trigger: AGGAATGGTTTGAACAACGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 90 bp CGGCTTTGTTGGGGACTATGTTTTCATGAGGCTGCAGGACCGCCTTaGTCTCTTCATTCATCTTACAAAGGTAACGTTCATGCTGATGCA +
Preference number: 1 (lower is better)
Translates to: RLCWGLCFHEAAGPP*SLHSSYKGNVHADA
Trigger: TGCATCAGCATGAACGTTACCTTTGTAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGCCTCATGAAAACATAGTCCCCAACAAAGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 90 bp TTTCAGCAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATaGTTTGAGTACAGACATGTGGTCCTTGTATGGGTTGATGGGGCT +
Preference number: 1 (lower is better)
Translates to: FQQFIGVGLHVHSIV*FEYRHVVLVWVDGA
Trigger: AGCCCCATCAACCCATACAAGGACCACATGTCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 90 bp ATTCTTCACTGTACCATTGTTAATTGCGGTCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTCTTCCTTCATTTCTTCTGTGGGGGA +
Preference number: 1 (lower is better)
Translates to: ILHCTIVNCGLDRGF*PHSVIVFLHFFCGG
Trigger: TCCCCCACAGAAGAAATGAAGGAAGACTATGACACTATGGGGCCAGAAGCCACGATCCAGACCGCAATTAACAATGGTACAGTGAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 90 bp GTTAGGTTGCACATTCATTGTTTGTTGGTCCTATCTCTTGTGGATTaGGACACAGATATGCCCCATGGGCAACAGAGACCTACATTGCTT +
Preference number: 1 (lower is better)
Translates to: VRLHIHCLLVLSLVD*DTDMPHGQQRPTLL
Trigger: AAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCTGTGTCCCAATCCACAAGAGATAGGACCAACAAACAATGAATGTGCAACCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR GCA 90 bp ATCGTGTCTCTCCCATTTCTCCACCATATAGCTCCCTCACTGTTTTaGTATCTTAGGTCCACCTCTTTCTCACAATGCATCCTCATACAT +
Preference number: 1 (lower is better)
Translates to: IVSLPFLHHIAPSLF*YLRSTSFSQCILIH
Trigger: ATGTATGAGGATGCATTGTGAGAAAGAGGTGGACCTAAGATAGCAAAACAGTGAGGGAGCTATATGGTGGAGAAATGGGAGAGACACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR CCA 90 bp CAATCTGTAGAACCTTTTGTACCTCACTTAAATTACTATTCATGGTaGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCT +
Preference number: 1 (lower is better)
Translates to: QSVEPFVPHLNYYSW*ETQVKGLPSLHLSA
Trigger: AGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCATGAATAGTAATTTAAGTGAGGTACAAAAGGTTCTACAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 90 bp CTTCATTCATCTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATaGGGCCAGGAAAACTTTCTTTACAGAACTGGCATGAAAATGGAG +
Preference number: 1 (lower is better)
Translates to: LHSSYKGNVHADAKG*GQENFLYRTGMKME
Trigger: CTCCATTTTCATGCCAGTTCTGTAAAGAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAGATGAATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 90 bp GGTTTTGTTAGCCTGAGAGGAGGATCACAATTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGTGATGTTATGGAGTCCATAGGTTTT +
Preference number: 1 (lower is better)
Translates to: GFVSLRGGSQFVTLL*SSAIDGDVMESIGF
Trigger: AAAACCTATGGACTCCATAACATCACCATCTATAGCAGAACTCCACAACAGTGTTACGAATTGTGATCCTCCTCTCAGGCTAACAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 90 bp CCAGTCCAATTCATGCTAAGGAAGATGTATGTTTTGTTTAGCTCTTaGGGAGAAATTCTGATACGCATCTCTCTTCCCAGTTATTTCAGG +
Preference number: 1 (lower is better)
Translates to: PVQFMLRKMYVLFSS*GEILIRISLPSYFR
Trigger: CCTGAAATAACTGGGAAGAGAGATGCGTATCAGAATTTCTCCGCAAGAGCTAAACAAAACATACATCTTCCTTAGCATGAATTGGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CCA 90 bp GAGAGATTTCACTCTGACATGACTGTCACACAAGATAAAAGTATTTaGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGAT +
Preference number: 1 (lower is better)
Translates to: ERFHSDMTVTQDKSI*HIAIKAKASMEPTD
Trigger: ATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACTTTTATCTTGTGTGACAGTCATGTCAGAGTGAAATCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCTTGCCCATTGGCCTCTaGCGTGCCAAGGCGAGACAG +
Preference number: 2 (lower is better)
Translates to: GADLSLACVSPYAARAGCLPIGL*RAKARQ
Trigger: CTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAA...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp CATCCCAGGACCCGCTGCCCGAATCAGGGGCAAAAGCAACAAACTTaGCAAGTTACAAACGGGCCGCACCGGTGGCAAGCAGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: HPRTRCPNQGQKQQT*QVTNGPHRWQAAAG
Trigger: CCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR TCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGCTGACTCCAAGGCTCTaGTCTGCGTGTGCCCCTCGA +
Preference number: 2 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLLTPRL*SACAPR
Trigger: TCGAGGGGCACACGCAGATCAGAGCCTTGGAGTCAG...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR GCA 90 bp GCTGCATTGGACTCTGAGCAGATGGATGAACTCCTAAAGGGCTGGTGGCTCCAAGCCGCTCGAGCTGGGTaGGGTAGGCAAACGTGTAGC +
Preference number: 2 (lower is better)
Translates to: AALDSEQMDELLKGWWLQAARAG*GRQTCS
Trigger: GCTACACGTTTGCCTACCGCACCCAGCTCGAGCGGC...TTGGAGCCACCAGCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGGAGCGCCCTCAGAACTaGTACCTGCCACACAACCTG +
Preference number: 2 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLERPQN*YLPHNL
Trigger: CAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTC...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp ATCCCAGGACCCGCTGCCCGAATCAGGGGCAAAAGCAACAAACTTTGCAAGTTAAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCAT +
Preference number: 2 (lower is better)
Translates to: IPGPAARIRGKSNKLCKLNGPHR*QAAAGH
Trigger: ATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTT...TAACTTGCAAAGTTTGTTGCTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR CCA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTTGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: MEMDIFGAPSELVPATQPWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCAGAGCGCCCTCAGAACTaGTACCTGCCACACAACCTG +
Preference number: 2 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPAERPQN*YLPHNL
Trigger: CAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTC...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 2 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLRFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGCCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 2 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp TCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGG +
Preference number: 2 (lower is better)
Translates to: STEACRISLLCQGCSTPPSLAHV*GGLMVG
Trigger: CCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT...GGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR CAA 90 bp ACCCTCCCTTATTTCATCTTCCTCTTCCTCTCTTGGCAACAGAGCTaGGCTCACGTGTGGGGAGGACTCATGGTTGGGCACACTAGCTGG +
Preference number: 2 (lower is better)
Translates to: TLPYFIFLFLSWQQS*AHVWGGLMVGHTSW
Trigger: CCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAGATGAAATAAGGGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR-3UTR TCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCAAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 2 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPARFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 2 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPAPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGAGCTGTGTCACTGCGCTaGAGGTACTCCTCGATGCTG +
Preference number: 2 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRAVSLR*RYSSML
Trigger: CAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGC...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp TCAATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACACATCCCAGGACCCGCTaGCCGAATCAGGGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: SIVCEHCKPALPLSVTGTHPRTR*PNQGQK
Trigger: CTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGATG...TGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGGCAAGGCAGGGTCTaGCCACCCTCCTCTACTTCG +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGQGRV*PPSSTS
Trigger: CGAAGTAGAGGAGGGTGGGCAGACCCTGCCTTGCCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAATGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp GCTCACGTGTGGGGAGGACTCATGGTTGGGCACACTAGCTGGACTCGTCTCCTGTCATCCTCAGCAATATaGAGCTTGTCTTCCTCATCT +
Preference number: 2 (lower is better)
Translates to: AHVWGGLMVGHTSWTRLLSSSAI*SLSSSS
Trigger: AGATGAGGAAGACAAGCTTCATATTGCTGAGGATGA...CAGGAGACGAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR-3UTR TCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGTGTGTGTGTGCAGCGTaGCAAAACTTGCAGAAGATC +
Preference number: 2 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLCVCAA*QNLQKI
Trigger: GATCTTCTGCAAGTTTTGTCACGCTGCACACACACA...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGTGTGTGTGTGCAGCGTaGCAAAACTTGCAGAAGATC +
Preference number: 2 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLCVCAA*QNLQKI
Trigger: GATCTTCTGCAAGTTTTGTCACGCTGCACACACACA...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGATCGATGCTGACTGCATaGCCATCGCGTTCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRSMLTA*PSRSSS
Trigger: ACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGA...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp GAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATaGGACTCTGAGCAGATGGATGAACTCCTAAAGGGCTGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: ETQVKGLPSLHLSAA*DSEQMDELLKGWWL
Trigger: GAGCCACCAGCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp ACAGGAGACCTGGGTAATAAAGAGTCTTTTGTGGGAGGGTTACTGTaGGGAGCTAACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTG +
Preference number: 2 (lower is better)
Translates to: TGDLGNKESFVGGLL*GANGLELLSRDGDL
Trigger: CAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGACTCTTTATTACCCAGGTCTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCATGTGTGTGTGCAGCGTaGCAAAACTTGCAGAAGATC +
Preference number: 2 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPACVCAA*QNLQKI
Trigger: GATCTTCTGCAAGTTTTGTCACGCTGCACACACACA...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTACCTGCCACACAACCTaGCCCAGTGCTTTGAAAGTC +
Preference number: 2 (lower is better)
Translates to: MEMDIFGAPSELVPATQPTCHTT*PSALKV
Trigger: GACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGT...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACACCAGCCTTGTGTGTGTaGAGCGTGACAAAACTTGCA +
Preference number: 2 (lower is better)
Translates to: ALLEASNALLSYLQGRHTPALCV*SVTKLA
Trigger: TGCAAGTTTTGTCACGCTGCACACACACAAGGCTGG...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTT +
Preference number: 2 (lower is better)
Translates to: ALLEASNALLSYLQGRHTAAYWL*YEGKHV
Trigger: AACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGC...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTC +
Preference number: 2 (lower is better)
Translates to: GFWVNNGCVTALKVLLDALDRGF*PHSVIV
Trigger: GACTATGACACTATGGGGCCAGAAGCCACGATCCAG...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 2 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLSSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGCCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 2 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGATTAGTGGCACCATTATaGCTCACTACCGGAAGACCG +
Preference number: 2 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRLVAPL*LTTGRP
Trigger: CGGTCTTCCGGTAGTGAGTCATAATGGTGCCACTAA...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTGCTCTGATCTGCGTGTaGCCCTCGAACCCCCATCTC +
Preference number: 2 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSALICV*PSNPHL
Trigger: GAGATGGGGGTTCGAGGGGCACACGCAGATCAGAGC...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR CCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp CTCCTTGGGTTAGCATTTGGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATTTGTTAATTGCGGTCTaGATCGTGGCTTCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: LLGLAFGADLSLACVSPYLLIAV*IVASGP
Trigger: GGGGCCAGAAGCCACGATCCAGACCGCAATTAACAA...ATATGGTGACACACAAGCCAGGGACAGATCAGCACCAAATGCTAACCCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTTTGGGCAAAAGCATCTaGAGTTCCAGGTGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: MVGNPSKGASIPTPKCCILGKSI*SSRWQV
Trigger: GACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAA...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATGTGAGCCACCGGTCCTaGCCTTTCCTTCTTTCTAAG +
Preference number: 2 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDVSHRS*PFLLSK
Trigger: CTTAGAAAGAAGGAAAGGCCAGGACCGGTGGCTCAC...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR-3UTR TCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAACGTGCATGTCTCTGTaGGATTTTTCAGAGGCTGAT +
Preference number: 2 (lower is better)
Translates to: ALLEASNALLSYLQGRHTTCMSL*DFSEAD
Trigger: ATCAGCCTCTGAAAAATCTCACAGAGACATGCACGT...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGTCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 2 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLSGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTATCCAAGGCTCTGATCTaGGTGTGCCCCTCGAACCCC +
Preference number: 2 (lower is better)
Translates to: NCCKEKNLPHLRINAALLSKALI*VCPSNP
Trigger: GGGGTTCGAGGGGCACACGCAGATCAGAGCCTTGGA...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR GCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGATGGCGGTACTTGATGTaGTCCTTCAGTGATGTCAAG +
Preference number: 2 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRWRYLM*SFSDVK
Trigger: CTTGACATCACTGAAGGAGCACATCAAGTACCGCCA...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGTTGTGTGTCACCATATaGCGCTCGAGCTGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVLCVTI*RSSWVR
Trigger: CCGCACCCAGCTCGAGCGGCATATGGTGACACACAA...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCAAAGATAACCAAGTCTaGACTGACAGTGATCCGAAG +
Preference number: 2 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCKDNQV*TDSDPK
Trigger: CTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTT...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCCTCCTAAAGGGCTGGTaGCTCCAAGCCCACCATTCA +
Preference number: 2 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFLLKGW*LQAHHS
Trigger: TGAATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAG...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp ACCAAAGAGCAATCAAAAAGGTGTCTGACTTGGCCATTCAGACAATaGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACC +
Preference number: 2 (lower is better)
Translates to: TKEQSKRCLTWPFRQ*PPCGNAGMNGTVDT
Trigger: GGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCAAGTCAGACACCTTTTTGATTGCTCTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CAA 90 bp CAGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTaGTTTGTGTGTATATCCAGGGCCCTACAGCCCCTGAATGGCCTC +
Preference number: 2 (lower is better)
Translates to: QLCLLQCVGLQIYTH*FVCISRALQPLNGL
Trigger: GAGGCCATTCAGGGGCTGTAGGGCCCTGGATATACACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 90 bp AATAAAGAGTCTTTTGTGGGAGGGTTACTGTTGGGAGCTAACGGCTaGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGG +
Preference number: 2 (lower is better)
Translates to: NKESFVGGLLLGANG*ELLSRDGDLEFEYW
Trigger: CCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGACTCTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCATTGGAAGAATGCAGATaGCAAAAACTGTTGCAAGGA +
Preference number: 2 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPALEECR*QKLLQG
Trigger: TCCTTGCAACAGTTTTTGTCATCTGCATTCTTCCAA...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGCCCTACAGCCCCTaGATGGCCTCACACATCTTG +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGPYSP*MASHIL
Trigger: CAAGATGTGTGAGGCCATTCAGGGGCTGTAGGGCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCATCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 2 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPASGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGATTGGGACACAGATATaGCCCATGGGCAACAGAGAC +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRIGTQI*PMGNRD
Trigger: GTCTCTGTTGCCCATGGGGCATATCTGTGTCCCAAT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGCTCCTCGATGCTGACTaGATGACCATCGCGTTCCTC +
Preference number: 2 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVLLDAD*MTIAFL
Trigger: GAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAG...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAAAAGATAACCAAGTCTaGACTGACAGTGATCCGAAG +
Preference number: 2 (lower is better)
Translates to: ALLEASNALLSYLQGRHTKDNQV*TDSDPK
Trigger: CTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTT...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGATTTCTTCTTGCCCATTaGCCTCTGGCGTGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRFLLAH*PLACQG
Trigger: GCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAA...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCGGGCAGGTCAGCAGTTaGGCAAAAGCATCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFGQVSS*AKASGV
Trigger: AACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCC...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGGAACTCCTAAAGGGCTaGTGGCTCCAAGCCCACCAT +
Preference number: 2 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVELLKG*WLQAHH
Trigger: ATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAGTTC...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp TTCATTTCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCC +
Preference number: 2 (lower is better)
Translates to: FISSGPSTEACRISL*CQGCSTPPSLISSS
Trigger: GGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR CAA 90 bp CCCACTCCGCCCCCAGTCCAATTCATGCTAAGGAAGATGTATGTTTaGTTTAGCTCTTGCGGAGAAATTCTGATACGCATCTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: PTPPPVQFMLRKMYV*FSSCGEILIRISLP
Trigger: GGGAAGAGAGATGCGTATCAGAATTTCTCCGCAAGAGCTAAACAAAACATACATCTTCCTTAGCATGAATTGGACTGGGGGCGGAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR TCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCAAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 2 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSSSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp TCAATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACATCATTTAAGCATCTCTaGAACGGGAGCAACTTCTCC +
Preference number: 2 (lower is better)
Translates to: SIVCEHCKPALPLSVTGTSFKHL*NGSNFS
Trigger: GGAGAAGTTGCTCCCGTTTCAGAGATGCTTAAATGA...TGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGGATGTGCTCCTTCAGTaGTGTCAAGCGCTTGTAGCC +
Preference number: 2 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVDVLLQ*CQALVA
Trigger: GGCTACAAGCGCTTGACATCACTGAAGGAGCACATC...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGATCTCGTGGCGGTACTTaGTGTGCTCCTTCAGTGATG +
Preference number: 2 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRSRGGT*CAPSVM
Trigger: CATCACTGAAGGAGCACATCAAGTACCGCCACGAGA...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCCCTTGTTCCTCAGGTTaGGAGCATGGATCCTTCATG +
Preference number: 2 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFPCSSG*EHGSFM
Trigger: CATGAAGGATCCATGCTCTCAACCTGAGGAACAAGG...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTCACAACCTGCCCCAGTaGTTTGAAAGTCAGCAAAAC +
Preference number: 2 (lower is better)
Translates to: SLLALLRRKACFYPNWLSHNLPQ*FESQQN
Trigger: GTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACTCAGAACTGGTACCTaGCACACAACCTGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: NCCKEKNLPHLRINAALLLRTGT*HTTCPS
Trigger: ACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCAGGTCATTTTCTTCTTaGCCATTGGCCTCTGGCGTG +
Preference number: 2 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFRSFSS*PLASGV
Trigger: CACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCT...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTATGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: NTETYDIAVEQGTLILVLWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCACAGATATGCCCCATaGGCAACAGAGACCTACATT +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRHRYAP*ATETYI
Trigger: AATGTAGGTCTCTGTTGCCCATGGGGCATATCTGTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTC +
Preference number: 2 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFLLRGF*VNNGCV
Trigger: GACACAGCCATTATTTACCCAGAAGCCCCTGAGGAG...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTATCTGGAGTTCCAGGTaGCAGGTCATTTTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIIWSSR*QVIFFL
Trigger: CAAGAAGAAAATGACCTGCCACCTGGAACTCCAGAT...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp CACTACCGGAAGACCGACAGGCGGAATATTAGGAGAAGTAACTCCTaGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGATAACCTTT +
Preference number: 2 (lower is better)
Translates to: HYRKTDRRNIRRSNS*FLRLRAWILHVITF
Trigger: AAAGGTTATCACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAATATTCCGCCTGTCGGTCTTCCGGTAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp GAGCTAACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTaGAGTACTGGTAGACTTTTCGTTGTTCAAACCATTCCTTCACAA +
Preference number: 2 (lower is better)
Translates to: ELTAWSFFPGMGTWN*STGRLFVVQTIPSQ
Trigger: TTGTGAAGGAATGGTTTGAACAACGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTCCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 2 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAATCATTTAAGCATCTCTaGAACGGGAGCAACTTCTCC +
Preference number: 2 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKSFKHL*NGSNFS
Trigger: GGAGAAGTTGCTCCCGTTTCAGAGATGCTTAAATGA...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 2 (lower is better)
Translates to: NCCKEKNLPHLRINAALLPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGTGTGTGTGTGCAGCGTaGCAAAACTTGCAGAAGATC +
Preference number: 2 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMCVCAA*QNLQKI
Trigger: GATCTTCTGCAAGTTTTGTCACGCTGCACACACACA...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTGGTACTCCTCGATGCTaGCTGCATGACCATCGCGTT +
Preference number: 2 (lower is better)
Translates to: KRRALLSTKTPALLGTMFGTPRC*LHDHRV
Trigger: AACGCGATGGTCATGCAGTCAGCATCGAGGAGTACC...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCATCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 2 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSSGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGCACAACCTGCCCCAGTaGTTTGAAAGTCAGCAAAAC +
Preference number: 2 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMHNLPQ*FESQQN
Trigger: GTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTGGCCATTCAGACAATTaGCCCCTTGTGGGAATGCGG +
Preference number: 2 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGGHSDN*PLVGMR
Trigger: CCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCC...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTAATCTCCCGCTCCGAGTaGTCATTTCTGACTCCAAGG +
Preference number: 2 (lower is better)
Translates to: NCCKEKNLPHLRINAALLISRSE*SFLTPR
Trigger: CCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGAT...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCCTCCTCTACTTCGTaGACACTTTCTTCTTTCCAA +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPSSTS*TLSSFQ
Trigger: TTGGAAAGAAGAAAGTGTGCACGAAGTAGAGGAGGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAAAACTCTAGGCTGTaGATAACAGGAGGCATAGCA +
Preference number: 2 (lower is better)
Translates to: RYAPWATETYIALKEATGKNSRL*ITGGIA
Trigger: TGCTATGCCTCCTGTTATCCACAGCCTAGAGTTTTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGGTCCTATCTCTTGTaGATTGGGACACAGATATGC +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRWSYLL*IGTQIC
Trigger: GCATATCTGTGTCCCAATCCACAAGAGATAGGACCA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCTACAGCCCCTGAATaGCCTCACACATCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPTAPE*PHTSWS
Trigger: GCTCCAAGATGTGTGAGGCCATTCAGGGGCTGTAGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCTCAGTAGTCAAGCTCTaGAGGCAAGCTTTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFSVVKL*RQALAS
Trigger: TGAAGCCAAAGCTTGCCTCCAGAGCTTGACTACTGA...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp GAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTATCTCTaGTGGATTGGGACACAGATATGCCCCATGGGCAACAGAGACCTA +
Preference number: 2 (lower is better)
Translates to: EKELGCTFIVCWSYL*WIGTQICPMGNRDL
Trigger: TAGGTCTCTGTTGCCCATGGGGCATATCTGTGTCCCAATCCACAAGAGATAGGACCAACAAACAATGAATGTGCAACCTAACTCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR TCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 2 (lower is better)
Translates to: NCCKEKNLPHLRINAALLPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTCCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 2 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGCACACTCTGTGCATTTaGACTTGCGATTACCTGCTC +
Preference number: 2 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVHTLCI*TCDYLL
Trigger: GAGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTG...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGAAAGCTTTGGCTTCATTaGCTTTTTCCAACGTATAGT +
Preference number: 2 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRKLWLH*LFPTYS
Trigger: ACTATACGTTGGAAAAAGTCAATGAAGCCAAAGCTT...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATCACACAGAAAGCTTCTaGACAATATTTAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDHTESF*TIFRLL
Trigger: GAGAAGCCTAAATATTGTTCAGAAGCTTTCTGTGTG...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR-3UTR GCA 90 bp TCAATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACATCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 2 (lower is better)
Translates to: SIVCEHCKPALPLSVTGTSGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...TGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTCACAACCTGCCCCAGTaGTTTGAAAGTCAGCAAAAC +
Preference number: 2 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSHNLPQ*FESQQN
Trigger: GTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATCTCAGAACTGGTACCTaGCACACAACCTGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYLRTGT*HTTCPS
Trigger: ACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAG...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGCAGCGTGACAAAACTTaGAGAAGATCTCCACAGAGA +
Preference number: 2 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMQRDKT*RRSPQR
Trigger: TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTG...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATGCCCCCTTGTGGGAATaGGGGAATGAATGGTACAGT +
Preference number: 2 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYAPLWE*GNEWYS
Trigger: ACTGTACCATTCATTCCCGCATTCCCACAAGGGGGC...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAACAGAGACCTACATTaGTTTAAAAGAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRNRDLH*FKRGHR
Trigger: CCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAAAAACTCTAGGCTGTaGATAACAGGAGGCATAGCA +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRKNSRL*ITGGIA
Trigger: TGCTATGCCTCCTGTTATCCACAGCCTAGAGTTTTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR TCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 2 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYRFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGTACATTTCTTGCTGCTaGTGTGCGAACTGTAGGAAC +
Preference number: 2 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVYISCC*CANCRN
Trigger: GTTCCTACAGTTCGCACATCAGCAGCAAGAAATGTA...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTATTGGGACACAGATATaGCCCATGGGCAACAGAGAC +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCIGTQI*PMGNRD
Trigger: GTCTCTGTTGCCCATGGGGCATATCTGTGTCCCAAT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGATGTACCATTGTTAATTaGGGTCTGGATCGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRCTIVN*GLDRGF
Trigger: GAAGCCACGATCCAGACCGCAATTAACAATGGTACA...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATACCTCTTTCTCACAATaGATCCTCATACATCATACT +
Preference number: 2 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDTSFSQ*ILIHHT
Trigger: AGTATGATGTATGAGGATGCATTGTGAGAAAGAGGT...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR-3UTR CCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGAAAGATAACCAAGTCTaGACTGACAGTGATCCGAAG +
Preference number: 2 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMKDNQV*TDSDPK
Trigger: CTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTT...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGCTCTTGGAGAAAATaGGCAGGGGTGTTCAGTTGT +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGSWRK*AGVFSC
Trigger: ACAACTGAACACCCCTGCCCATTTTCTCCAAGAGCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 90 bp GAAGGTTTTGTTAGCCTGAGAGGAGGATCACAATTCGTAACACTGTaGTGGAGTTCTGCTATAGATGGTGATGTTATGGAGTCCATAGGT +
Preference number: 2 (lower is better)
Translates to: EGFVSLRGGSQFVTL*WSSAIDGDVMESIG
Trigger: ACCTATGGACTCCATAACATCACCATCTATAGCAGAACTCCACAACAGTGTTACGAATTGTGATCCTCCTCTCAGGCTAACAAAACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 2 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLSSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 2 (lower is better)
Translates to: NTETYDIAVEQGTLILVLPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCACAAGTGTTATCCTaGTATTTTCAGACTCAGGTA +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSQVLS*YFQTQV
Trigger: TACCTGAGTCTGAAAATATCAGGATAACACTTGTGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR TCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTGGGAAGAACCCGTCTTaGTATTGTTTCTCATTCGGC +
Preference number: 2 (lower is better)
Translates to: KRRALLSTKTPALLGTMFGKNPS*YCFSFG
Trigger: GCCGAATGAGAAACAATATCAAGACGGGTTCTTCCC...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR TCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGACTCAGAAAGTACAGATaGCAAGAGGAGGGCTTTATT +
Preference number: 2 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRLRKYR*QEEGFI
Trigger: AATAAAGCCCTCCTCTTGTCATCTGTACTTTCTGAG...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR GCA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATCACAACCTGCCCCAGTaGTTTGAAAGTCAGCAAAAC +
Preference number: 2 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYHNLPQ*FESQQN
Trigger: GTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACAGCGTGACAAAACTTaGAGAAGATCTCCACAGAGA +
Preference number: 2 (lower is better)
Translates to: NCCKEKNLPHLRINAALLQRDKT*RRSPQR
Trigger: TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCATTGGGACACAGATATaGCCCATGGGCAACAGAGAC +
Preference number: 2 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVIGTQI*PMGNRD
Trigger: GTCTCTGTTGCCCATGGGGCATATCTGTGTCCCAAT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGAGAAAGAGTTAGGTTaGACATTCATTGTTTGTTGG +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQREKELG*TFIVCW
Trigger: CCAACAAACAATGAATGTGCAACCTAACTCTTTCTC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCACAGATATGCCCCATaGGCAACAGAGACCTACATT +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCHRYAP*ATETYI
Trigger: AATGTAGGTCTCTGTTGCCCATGGGGCATATCTGTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAAAACTCCTCAGATATaGGACATTGTAGTGATTGTC +
Preference number: 2 (lower is better)
Translates to: FSLELEDYAALMCNRVQRKTPQI*DIVVIV
Trigger: GACAATCACTACAATGTCCCATATCTGAGGAGTTTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGAGTGCTGATCTGTCCCTaGCTTGTGTGTCACCATATG +
Preference number: 2 (lower is better)
Translates to: STGLILVKWEGFVSLRGGVLICP*LVCHHM
Trigger: CATATGGTGACACACAAGCCAGGGACAGATCAGCAC...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTaGTTGGTCCTATCTCTTGTGGATTGGGACACAGATATGCCCCAT +
Preference number: 2 (lower is better)
Translates to: LSSFQGERVRLHIHC*LVLSLVDWDTDMPH
Trigger: ATGGGGCATATCTGTGTCCCAATCCACAAGAGATAGGACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 90 bp TCTACTTCGTGCACACTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTaGCACATTCATTGTTTGTTGGTCCTATCTCTTGTGGATTGGGAC +
Preference number: 2 (lower is better)
Translates to: STSCTLSSFQGERVR*HIHCLLVLSLVDWD
Trigger: GTCCCAATCCACAAGAGATAGGACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAGTGTGCACGAAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR TCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTACACTCCCTCTCTCTGTaGCAGGCACAAAATAGTGTC +
Preference number: 2 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLHSLSL*QAQNSV
Trigger: GACACTATTTTGTGCCTGTCACAGAGAGAGGGAGTG...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTTTCCAAGTGGTAAGCTaGTGCTGTTGGCATAAACAG +
Preference number: 2 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGFQVVS*CCWHKQ
Trigger: CTGTTTATGCCAACAGCATCAGCTTACCACTTGGAA...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCAGCGTGACAAAACTTaGAGAAGATCTCCACAGAGA +
Preference number: 2 (lower is better)
Translates to: TETYDIAVEQGTLILVLPQRDKT*RRSPQR
Trigger: TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTAGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTT +
Preference number: 2 (lower is better)
Translates to: NTETYDIAVEQGTLILVLAAYWL*YEGKHV
Trigger: AACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGC...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGAGGGAGAAACGTTTCTTaGAGTTTGGGCACTCGTAAG +
Preference number: 2 (lower is better)
Translates to: STGLILVKWEGFVSLRGGGRNVS*SLGTRK
Trigger: CTTACGAGTGCCCAAACTGCAAGAAACGTTTCTCCC...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCACAGATATGCCCCATaGGCAACAGAGACCTACATT +
Preference number: 2 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVHRYAP*ATETYI
Trigger: AATGTAGGTCTCTGTTGCCCATGGGGCATATCTGTG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGTCCTATCTCTTGTaGATTGGGACACAGATATGC +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWSYLL*IGTQIC
Trigger: GCATATCTGTGTCCCAATCCACAAGAGATAGGACCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGACATGTGGTCCTTGTATaGGTTGATGGGGCTTGTCAT +
Preference number: 2 (lower is better)
Translates to: STGLILVKWEGFVSLRGGHVVLV*VDGACH
Trigger: ATGACAAGCCCCATCAACCCATACAAGGACCACATG...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp AAAACAGGCTCCCTAGAAGCTCATCAACTTTACGAAGAAAGCTACTaGCCAAAGATTTCCACACTTTGCAAAGATAACCAAGTCTGGACT +
Preference number: 2 (lower is better)
Translates to: KTGSLEAHQLYEESY*PKISTLCKDNQVWT
Trigger: AGTCCAGACTTGGTTATCTTTGCAAAGTGTGGAAATCTTTGGCAAGTAGCTTTCTTCGTAAAGTTGATGAGCTTCTAGGGAGCCTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTAGGGATAACCATTTCTaGTCTTCTGATTGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSRDNHF*SSDCFS
Trigger: GGAGAAACAATCAGAAGAGCAGAAATGGTTATCCCT...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAACAGAGACCTACATTaGTTTAAAAGAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCNRDLH*FKRGHR
Trigger: CCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGAGTTAGAGGATTATaGAGCCCTAATGTGCAATCG +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRVRGL*SPNVQS
Trigger: CGATTGCACATTAGGGCTGCATAATCCTCTAACTCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGCCTCAAAATCTGATGTaGAATTTGCATTCTTCACTG +
Preference number: 2 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVPQNLM*NLHSSL
Trigger: CAGTGAAGAATGCAAATTGCACATCAGATTTTGAGG...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTAGGCAAAGGCTTCCATaGAGCCTACTGATTATTATC +
Preference number: 2 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGRQRLP*SLLIII
Trigger: GATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCT...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAAAACTCTAGGCTGTaGATAACAGGAGGCATAGCA +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKNSRL*ITGGIA
Trigger: TGCTATGCCTCCTGTTATCCACAGCCTAGAGTTTTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCACATCTCTTGGTTGTaGAGGGGAATTTCTTGTTTG +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCHISWL*RGISCL
Trigger: CAAACAAGAAATTCCCCTCCACAACCAAGAGATGTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR TCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTAATCAAAAAGGTGTCTaGCTTGGCCATTCAGACAAT +
Preference number: 2 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGNQKGV*LGHSDN
Trigger: ATTGTCTGAATGGCCAAGTCAGACACCTTTTTGATT...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR GCA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTATACAGTTTTAACATaGCTCTCTATCCTTAGGGAG +
Preference number: 2 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPYTVLT*LSILRE
Trigger: CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATA...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR-3UTR GCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGC +
Preference number: 2 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYKSNKL*KLQTGR
Trigger: GCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTT...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAACAGAGACCTACATTaGTTTAAAAGAGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVNRDLH*FKRGHR
Trigger: CCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTTTTGTTTAGCTCTTaGGGAGAAATTCTGATACGC +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVLFSS*GEILIR
Trigger: GCGTATCAGAATTTCTCCGCAAGAGCTAAACAAAAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAAAAACTCTAGGCTGTaGATAACAGGAGGCATAGCA +
Preference number: 2 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVKNSRL*ITGGIA
Trigger: TGCTATGCCTCCTGTTATCCACAGCCTAGAGTTTTT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAAATGCACATCTCTTaGTTGTGGAGGGGAATTTCT +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKMHIS*LWRGIS
Trigger: AGAAATTCCCCTCCACAACCAAGAGATGTGCATTTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR TCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTAAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 2 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLSSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTTTCCATGGAGCCTACTaGTTATTATCGTTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGFHGAY*LLSFSF
Trigger: AAAGGAAAACGATAATAATCAGTAGGCTCCATGGAA...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCACAAGTGTTATCCTaGTATTTTCAGACTCAGGTA +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSQVLS*YFQTQV
Trigger: TACCTGAGTCTGAAAATATCAGGATAACACTTGTGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGAGAAAGAGTTAGGTTaGACATTCATTGTTTGTTGG +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCEKELG*TFIVCW
Trigger: CCAACAAACAATGAATGTGCAACCTAACTCTTTCTC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTGATGTTACTAAAATaGACATCTCTTGGTTGTGGA +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLMLLK*TSLGCG
Trigger: TCCACAACCAAGAGATGTGCATTTTAGTAACATCAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAAACTCCTCAGATATaGGACATTGTAGTGATTGTC +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKTPQI*DIVVIV
Trigger: GACAATCACTACAATGTCCCATATCTGAGGAGTTTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCTTGTTTGCGACCTTaGAGAAGAATCTTAAGACAA +
Preference number: 2 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSCLRP*RRILRQ
Trigger: TTGTCTTAAGATTCTTCTCCAAGGTCGCAAACAAGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGCCTTCATTTCTTCTGTaGGGGAAAATTATCTTTAGC +
Preference number: 2 (lower is better)
Translates to: ESTDDKRRALLSTKTPALPSFLL*GKIIFS
Trigger: GCTAAAGATAATTTTCCCCCACAGAAGAAATGAAGG...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp GTAGGAGAAGAAGAAACAGAATTAGGGGAAGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTTACAGAGATTAAACCAATACATTTC +
Preference number: 2 (lower is better)
Translates to: VGEEETELGEEPVLI*FLIRPFTEIKPIHF
Trigger: GAAATGTATTGGTTTAATCTCTGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTTCCCCTAATTCTGTTTCTTCTTCTCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTCAGACATACTAAGTaGTTTTCCATTCTCCAACTT +
Preference number: 2 (lower is better)
Translates to: ESTDDKRRALLSTKTPALFRHTK*FSILQL
Trigger: AAGTTGGAGAATGGAAAACCACTTAGTATGTCTGAA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTaGGTTTTACCCTATTTGAAAACAAATGGTGGAAGACGTGAATTT +
Preference number: 2 (lower is better)
Translates to: NTETYDIAVEQGTLI*VLPYLKTNGGRREF
Trigger: AAATTCACGTCTTCCACCATTTGTTTTCAAATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CAA 90 bp AACTGGCATGAAAATGGAGTGGATATGTTGTGGTTCTCAATCATTTaGTCATCAGTGACCAAATCTATTAAAGTACGTAGCTTCTCTTTC +
Preference number: 2 (lower is better)
Translates to: NWHENGVDMLWFSII*SSVTKSIKVRSFSF
Trigger: GAAAGAGAAGCTACGTACTTTAATAGATTTGGTCACTGATGACAAAATGATTGAGAACCACAACATATCCACTCCATTTTCATGCCAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CCA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGCTTGTTGGTATTCCTTaGCGTAAATGTTTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: LNGSVGYTVLTCLSILRELVGIP*RKCFEE
Trigger: TTCCTCAAAACATTTACGCCAAGGAATACCAACAAG...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR CAA 90 bp GAGCTGCTTGATATTGTCTTGTTGGTATTCCTTGGCGTAAATGTTTaGAGGAAATTTCAGACACTTATATCCCAAATTAATGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: ELLDIVLLVFLGVNV*RKFQTLISQINGIL
Trigger: AAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATTTCCTCAAAACATTTACGCCAAGGAATACCAACAAGACAATATCAAGCAGCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR-3UTR CAA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCGGGGCAGGTCAGCAGTaGGGCAAAAGCATCTGGAGT +
Preference number: 3 (lower is better)
Translates to: GADLSLACVSPYAARAGCGAGQQ*GKSIWS
Trigger: ACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCC...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 72 bp GCAGGTCATTTTCTTCTTGCCCATTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCTCAGGGGCTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: AGHFLLAHWPLA*QGETAPQGLLG
Trigger: ACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 72 bp CTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTaGGGTAGGCAAACGTGTAGCTACAGAGAGGGCAGG +
Preference number: 3 (lower is better)
Translates to: LACVSPYAARAG*GRQTCSYREGR
Trigger: CCTGCCCTCTCTGTAGCTACACGTTTGCCTACCGCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp CACGTGTGGGGAGGACTCATGGTTGGGCACACTAGCTaGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACC +
Preference number: 3 (lower is better)
Translates to: HVWGGLMVGHTS*TRLLVQRVGNT
Trigger: GGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR CCA 72 bp CAACAAACTTTGCAAGTTACAAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTG +
Preference number: 3 (lower is better)
Translates to: QQTLQVTNGPHR*QAAAGHLPLRV
Trigger: CACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTTTGTAACTTGCAAAGTTTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR CCA 72 bp AGGTGGCAGGTCATTTTCTTCTTGCCCATTGGCCTCTaGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: RWQVIFFLPIGL*RAKARQLLRGF
Trigger: GAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp CAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTaGTCCTCCCACCAAAGGATCCTGAGTGGCTGGGAC +
Preference number: 3 (lower is better)
Translates to: QLHYSLDLPRLR*SSHQRILSGWD
Trigger: GTCCCAGCCACTCAGGATCCTTTGGTGGGAGGATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR GCA 72 bp CCCGCTGCCCGAATCAGGGGCAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGCACCGGTGGCAAGCAG +
Preference number: 3 (lower is better)
Translates to: PAARIRGKSNKL*KLQTGRTGGKQ
Trigger: CTGCTTGCCACCGGTGCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTTGCCCCTGATTCGGGCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
3UTR CCA 72 bp CTCTTCCTCTCTTGGCAACAGAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGGCACACTAGCTGGACT +
Preference number: 3 (lower is better)
Translates to: LFLSWQQSLAHV*GGLMVGHTSWT
Trigger: AGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR CCA 72 bp TGGCGTGCCAAGGCGAGACAGCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTA +
Preference number: 3 (lower is better)
Translates to: WRAKARQLLRGF*VNNGCVTALKV
Trigger: TACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp ATTCTTCTCGTGGCGGTACTTGATGTGCTCCTTCAGTaGTGTCAAGCGCTTGTAGCCCCGGTCGCAGTAGGG +
Preference number: 3 (lower is better)
Translates to: ILLVAVLDVLLQ*CQALVAPVAVG
Trigger: CCCTACTGCGACCGGGGCTACAAGCGCTTGACATCACTGAAGGAGCACATCAAGTACCGCCACGAGAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 72 bp GATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTaGCACACAACCTGCCCCAGTGCTTTGAAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: DGYLWSALRTGT*HTTCPSALKVS
Trigger: GCTGACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 72 bp GGATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTaGTACCTGCCACACAACCTGCCCCAGTGCTTTGAA +
Preference number: 3 (lower is better)
Translates to: GWRWISLERPQN*YLPHNLPQCFE
Trigger: TTCAAAGCACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 72 bp GTGTCTGACTTGGCCATTCAGACAATTGCCCCCTTGTaGGAATGCGGGAATGAATGGTACAGTGGACACCCC +
Preference number: 3 (lower is better)
Translates to: VSDLAIQTIAPL*ECGNEWYSGHP
Trigger: GGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCAAGTCAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCAAAAATAGTGTCTACCTaGGGAAGCCACGGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPAKIVST*GSHGAE
Trigger: CTCAGCACCGTGGCTTCCCAAGGTAGACACTATTTT...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGACAATTAGCTGACCTGTaGAATCCTCCACAGGGGACA +
Preference number: 3 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERQLADL*NPPQGT
Trigger: TGTCCCCTGTGGAGGATTCAACAGGTCAGCTAATTG...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR-3UTR CAA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATTGTAGAGGCAGGGTTTaGCCGTGTTACCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDCRGRV*PCYPGW
Trigger: CCAGCCTGGGTAACACGGCAAAACCCTGCCTCTACA...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR TCA 72 bp TGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTaGCTGCATGACCATCGCGTTCCTCCAGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: WLCHCAEGTPRC*LHDHRVPPVFF
Trigger: AAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 72 bp TGTGTCACTGCGCTGAAGGTACTCCTCGATGCTGACTaGATGACCATCGCGTTCCTCCAGTTTTCTTTTGGC +
Preference number: 3 (lower is better)
Translates to: CVTALKVLLDAD*MTIAFLQFSFG
Trigger: GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTACCTTCAGCGCAGTGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp TGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTaGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCA +
Preference number: 3 (lower is better)
Translates to: WWTVTLWTPAAY*LCYEGKHVSTP
Trigger: TGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 72 bp CTTTTGTGGGAGGGTTACTGTTGGGAGCTAACGGCTTaGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTG +
Preference number: 3 (lower is better)
Translates to: LLWEGYCWELTA*SFFPGMGTWNL
Trigger: CAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGACTTCTCCGTCCCTCATaGCCTCTAACCATCACTACC +
Preference number: 3 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRLLRPS*PLTITT
Trigger: GGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAG...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGGAGGCATAGCATTTaGATGCCACTCCTCCCCCTG +
Preference number: 3 (lower is better)
Translates to: RYAPWATETYIALKEATGRRHSI*MPLLPL
Trigger: CAGGGGGAGGAGTGGCATCAAAATGCTATGCCTCCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp TGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCACTTCCTCTTCCTCTCTaGGCAACAGAGCTTGGCTCA +
Preference number: 3 (lower is better)
Translates to: CRISLLCQGCSTPPSLISLPLPL*ATELGS
Trigger: TGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAG...TGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR-3UTR CAA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCAAGCAGTTTCCGGATTaGATTTTTGCTACAACGTGC +
Preference number: 3 (lower is better)
Translates to: REQLLRPSLPLTITTSTSKQFPD*IFATTC
Trigger: GCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTT...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGGAGGCATAGCATTTaGATGCCACTCCTCCCCCTG +
Preference number: 3 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRRHSI*MPLLPL
Trigger: CAGGGGGAGGAGTGGCATCAAAATGCTATGCCTCCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR GCA 72 bp GGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCACCCTCCCTTATTTCA +
Preference number: 3 (lower is better)
Translates to: GPSTEACRISLL*QGCSTPPSLIS
Trigger: TGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR GCA 72 bp ACTGTCACTCTATGGACACCAGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTTTCTACCCCAATTGGC +
Preference number: 3 (lower is better)
Translates to: TVTLWTPAAYWL*YEGKHVSTPIG
Trigger: GCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGCTGGTGTCCATAGAGTGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 72 bp CAGACAATTGCCCCCTTGTGGGAATGCGGGAATGAATaGTACAGTGGACACCCCAGCACCATTGACGTTATA +
Preference number: 3 (lower is better)
Translates to: QTIAPLWECGNE*YSGHPSTIDVI
Trigger: TATAACGTCAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTCTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: MEMDIFGAPSELVPATQPLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACACTGAGAACATTCAACTaGATCCCTGTTCTTTGCCAC +
Preference number: 3 (lower is better)
Translates to: ALLEASNALLSYLQGRHTLRTFN*IPVLCH
Trigger: GTGGCAAAGAACAGGGATCAAGTTGAATGTTCTCAG...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR TCA 72 bp TCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTaGCAGGCACAAAATAGTGTCTACCTTGGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: SVSIANLHSLSL*QAQNSVYLGKP
Trigger: TGGCTTCCCAAGGTAGACACTATTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR TCA 72 bp ACTTGTTTGTGTGTATATCCAGGGCCCTACAGCCCCTaGATGGCCTCACACATCTTGGAGCAAAAGCATGGT +
Preference number: 3 (lower is better)
Translates to: TCLCVYPGPYSP*MASHILEQKHG
Trigger: ACCATGCTTTTGCTCCAAGATGTGTGAGGCCATTCAGGGGCTGTAGGGCCCTGGATATACACACAAACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CCA 72 bp GTTTGTGTGTATATCCAGGGCCCTACAGCCCCTGAATaGCCTCACACATCTTGGAGCAAAAGCATGGTTAAC +
Preference number: 3 (lower is better)
Translates to: VCVYIQGPTAPE*PHTSWSKSMVN
Trigger: GTTAACCATGCTTTTGCTCCAAGATGTGTGAGGCCATTCAGGGGCTGTAGGGCCCTGGATATACACACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCACTTCTCCGTCCCTCATaGCCTCTAACCATCACTACC +
Preference number: 3 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSLLRPS*PLTITT
Trigger: GGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAG...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTTCTGTGCATTTGAACTaGCGATTACCTGCTCCTTGG +
Preference number: 3 (lower is better)
Translates to: MVGNPSKGASIPTPKCCISVHLN*RLPAPW
Trigger: CCAAGGAGCAGGTAATCGCAAGTTCAAATGCACAGA...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp CCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTaGGATTTTTCAGAGGCTGATGCTGGAAGGTGGCGG +
Preference number: 3 (lower is better)
Translates to: PDLIFATTCMSL*DFSEADAGRWR
Trigger: CCGCCACCTTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 72 bp TGGGTAATAAAGAGTCTTTTGTGGGAGGGTTACTGTTaGGAGCTAACGGCTTGGAGCTTCTTTCCAGGGATG +
Preference number: 3 (lower is better)
Translates to: WVIKSLLWEGYC*ELTAWSFFPGM
Trigger: CATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGACTCTTTATTACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp GTTTTACAGGAGACCTGGGTAATAAAGAGTCTTTTGTaGGAGGGTTACTGTTGGGAGCTAACGGCTTGGAGC +
Preference number: 3 (lower is better)
Translates to: VLQETWVIKSLL*EGYCWELTAWS
Trigger: GCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGACTCTTTATTACCCAGGTCTCCTGTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCAAAGCAGTTTCCGGATTaGATTTTTGCTACAACGTGC +
Preference number: 3 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSKQFPD*IFATTC
Trigger: GCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTT...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTTGGAGATGGATATCTTaGGAGCGCCCTCAGAACTGG +
Preference number: 3 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSWRWIS*ERPQNW
Trigger: CCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCA...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp GTACTCCTCGATGCTGACTGCATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCTTCTTCACTGTACCATaGTTAATTGCGGTCTGGATC +
Preference number: 3 (lower is better)
Translates to: VLLDADCMTIAFLQFSFGFFTVP*LIAVWI
Trigger: GATCCAGACCGCAATTAACAATGGTACAGTGAAGAA...GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCTTCTCGTGGCGGTACTaGATGTGCTCCTTCAGTGAT +
Preference number: 3 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFFSWRY*MCSFSD
Trigger: ATCACTGAAGGAGCACATCAAGTACCGCCACGAGAA...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCACTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTCTTCTCCGTCCCTCATaGCCTCTAACCATCACTACC +
Preference number: 3 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSLLRPS*PLTITT
Trigger: GGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAG...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGGAGGCATAGCATTTaGATGCCACTCCTCCCCCTG +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRRHSI*MPLLPL
Trigger: CAGGGGGAGGAGTGGCATCAAAATGCTATGCCTCCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGTTGGTCCTATCTCTaGTGGATTGGGACACAGATA +
Preference number: 3 (lower is better)
Translates to: FSLELEDYAALMCNRVQRCWSYL*WIGTQI
Trigger: TATCTGTGTCCCAATCCACAAGAGATAGGACCAACA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTTTCTTCTTGCCCATaGGCCTCTGGCGTGCCAAGG +
Preference number: 3 (lower is better)
Translates to: ESTDDKRRALLSTKTPALFSSCP*ASGVPR
Trigger: CCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 72 bp TGTGCAATTTGCATTCTTCACTGTACCATTGTTAATTaGGGTCTGGATCGTGGCTTCTGGCCCCATAGTGTC +
Preference number: 3 (lower is better)
Translates to: CAICILHCTIVN*GLDRGFWPHSV
Trigger: GACACTATGGGGCCAGAAGCCACGATCCAGACCGCAATTAACAATGGTACAGTGAAGAATGCAAATTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp AAGACAACCAAAGAGCAATCAAAAAGGTGTCTGACTTaGCCATTCAGACAATTGCCCCCTTGTGGGAATGCG +
Preference number: 3 (lower is better)
Translates to: KTTKEQSKRCLT*PFRQLPPCGNA
Trigger: CGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCAAGTCAGACACCTTTTTGATTGCTCTTTGGTTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 72 bp ATTCCTTCACAAATTCCTGAGGAAGGCCCACAGCAATaGAAATTTTCAGCAGTTCATCGGAGTTGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: IPSQIPEEGPQQ*KFSAVHRSWAP
Trigger: TGGAGCCCAACTCCGATGAACTGCTGAAAATTTCCATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp CTAACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTaGAATTTGAGTACTGGTAGACTTTTCGTTGTTCAA +
Preference number: 3 (lower is better)
Translates to: LTAWSFFPGMGT*NLSTGRLFVVQ
Trigger: TTGAACAACGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAAAAGCAGTTTCCGGATTaGATTTTTGCTACAACGTGC +
Preference number: 3 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKKQFPD*IFATTC
Trigger: GCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTT...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATCTTCTCCGTCCCTCATaGCCTCTAACCATCACTACC +
Preference number: 3 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYLLRPS*PLTITT
Trigger: GGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAG...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGCAGGGGTGTTCAGTaGTTCCAGTGTTTCCTCATC +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGRGVQ*FQCFLI
Trigger: GATGAGGAAACACTGGAACAACTGAACACCCCTGCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp GTACTCCTCGATGCTGACTGCATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCAATCTGATGTGCAATTaGCATTCTTCACTGTACCAT +
Preference number: 3 (lower is better)
Translates to: VLLDADCMTIAFLQFSFGNLMCN*HSSLYH
Trigger: ATGGTACAGTGAAGAATGCAAATTGCACATCAGATT...GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp GCACAAAATAGTGTCTACCTTGGGAAGCCACGGTGCTaGGAGGAAAAGGACAAAGAATTTCCTTTCACACAG +
Preference number: 3 (lower is better)
Translates to: AQNSVYLGKPRC*EEKDKEFPFTQ
Trigger: CTGTGTGAAAGGAAATTCTTTGTCCTTTTCCTCTCAGCACCGTGGCTTCCCAAGGTAGACACTATTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR TCA 72 bp CTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTaGGTACTGGTAGACTTTTCGTTGTTCAAACCATTC +
Preference number: 3 (lower is better)
Translates to: LGASFQGWGPGI*VLVDFSLFKPF
Trigger: GAATGGTTTGAACAACGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR GCA 72 bp CTCCCATTTCTCCACCATATAGCTCCCTCACTGTTTTaGTATCTTAGGTCCACCTCTTTCTCACAATGCATC +
Preference number: 3 (lower is better)
Translates to: LPFLHHIAPSLF*YLRSTSFSQCI
Trigger: GATGCATTGTGAGAAAGAGGTGGACCTAAGATAGCAAAACAGTGAGGGAGCTATATGGTGGAGAAATGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR CCA 72 bp TGTACCATTGTTAATTGCGGTCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTCTTCCTTCATTTCTTC +
Preference number: 3 (lower is better)
Translates to: CTIVNCGLDRGF*PHSVIVFLHFF
Trigger: GAAGAAATGAAGGAAGACTATGACACTATGGGGCCAGAAGCCACGATCCAGACCGCAATTAACAATGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp AGCCTGAGAGGAGGATCACAATTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGTGATGTTATGGAGTCC +
Preference number: 3 (lower is better)
Translates to: SLRGGSQFVTLL*SSAIDGDVMES
Trigger: GGACTCCATAACATCACCATCTATAGCAGAACTCCACAACAGTGTTACGAATTGTGATCCTCCTCTCAGGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTCTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCTCTGCCAGAAAGTTaGAAGATAGAGCTAAAAACA +
Preference number: 3 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPLPES*KIELKT
Trigger: TGTTTTTAGCTCTATCTTCAAACTTTCTGGCAGAGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCTATCTCTTGTGGATaGGGACACAGATATGCCCCA +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPISCG*GHRYAP
Trigger: TGGGGCATATCTGTGTCCCAATCCACAAGAGATAGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTGCACATTCATTGTTaGTTGGTCCTATCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLHIHC*LVLSLV
Trigger: CACAAGAGATAGGACCAACAAACAATGAATGTGCAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGAGAAAGAGTTAGGTaGCACATTCATTGTTTGTTG +
Preference number: 3 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGERVR*HIHCLL
Trigger: CAACAAACAATGAATGTGCAACCTAACTCTTTCTCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTGGAGGGGAATTTCTaGTTTGCGACCTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVEGNF*FATLEK
Trigger: CTTCTCCAAGGTCGCAAACAAGAAATTCCCCTCCAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGACAGGTCATTTTCTTCTaGCCCATTGGCCTCTGGCGT +
Preference number: 3 (lower is better)
Translates to: STGLILVKWEGFVSLRGGQVIFF*PIGLWR
Trigger: ACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTG...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp TCCAAATATAACTGCTCTGGAGTAATGAGGAGCATTTaGGAAGACAGCCTTCATTCAGACACGGAACTTGGG +
Preference number: 3 (lower is better)
Translates to: SKYNCSGVMRSI*EDSLHSDTELG
Trigger: CCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAATGCTCCTCATTACTCCAGAGCAGTTATATTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR CCA 72 bp TTACTGATCTGTCTCCTTGAGTCAGTAGTCAAGCTCTaGAGGCAAGCTTTGGCTTCATTGACTTTTTCCAAC +
Preference number: 3 (lower is better)
Translates to: LLICLLESVVKL*RQALASLTFSN
Trigger: GTTGGAAAAAGTCAATGAAGCCAAAGCTTGCCTCCAGAGCTTGACTACTGACTCAAGGAGACAGATCAGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp TCTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATaGGGCCAGGAAAACTTTCTTTACAGAACTGGCATG +
Preference number: 3 (lower is better)
Translates to: SYKGNVHADAKG*GQENFLYRTGM
Trigger: CATGCCAGTTCTGTAAAGAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp TTTGCCACTGAAGTTCAGAGACCAAAGGCATTTGTAAAAAGCTCCCCTTCTCCTAAGCAGTTTCCGGATTaGATTTTTGCTACAACGTGC +
Preference number: 3 (lower is better)
Translates to: FATEVQRPKAFVKSSPSPKQFPD*IFATTC
Trigger: GCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTT...AGGAGAAGGGGAGCTTTTTACAAATGCCTTTGGTCTCTGAACTTCAGTGGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACTGAGAACATTCAACTaGATCCCTGTTCTTTGCCAC +
Preference number: 3 (lower is better)
Translates to: NCCKEKNLPHLRINAALLLRTFN*IPVLCH
Trigger: GTGGCAAAGAACAGGGATCAAGTTGAATGTTCTCAG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp GAGCATTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCCTGCTTGATATTGTCTaGTTGGTATTCCTTGGCGTA +
Preference number: 3 (lower is better)
Translates to: EHLRRQPSFRHGTWVMFFLLDIV*LVFLGV
Trigger: TACGCCAAGGAATACCAACAAGACAATATCAAGCAG...GAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAATGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR-3UTR CAA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGCCACACTCTGTGCATTaGAACTTGCGATTACCTGCT +
Preference number: 3 (lower is better)
Translates to: ESTDDKRRALLSTKTPALPHSVH*NLRLPA
Trigger: AGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTGG...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGG +
Preference number: 3 (lower is better)
Translates to: ESTDDKRRALLSTKTPALGEEPV*ILFLIR
Trigger: CCGAATGAGAAACAATATCAAGACGGGTTCTTCCCC...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp GAACCTTTTGTACCTCACTTAAATTACTATTCATGGTaGGAAACCCAAGTAAAGGGGCTTCCATCCCTACAC +
Preference number: 3 (lower is better)
Translates to: EPFVPHLNYYSW*ETQVKGLPSLH
Trigger: GTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCATGAATAGTAATTTAAGTGAGGTACAAAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCTGAGAACATTCAACTaGATCCCTGTTCTTTGCCAC +
Preference number: 3 (lower is better)
Translates to: TETYDIAVEQGTLILVLPLRTFN*IPVLCH
Trigger: GTGGCAAAGAACAGGGATCAAGTTGAATGTTCTCAG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTAAAAATAGTGTCTACCTaGGGAAGCCACGGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLKIVST*GSHGAE
Trigger: CTCAGCACCGTGGCTTCCCAAGGTAGACACTATTTT...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp TTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTGAGAGCTGCTTGATATaGTCTTGTTGGTATTCCTTG +
Preference number: 3 (lower is better)
Translates to: LRRQPSFRHGTWVMFFFLESCLI*SCWYSL
Trigger: CAAGGAATACCAACAAGACAATATCAAGCAGCTCTC...AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR-3UTR CAA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTCTTAGGGAGAGCTGCTaGATATTGTCTTGTTGGTAT +
Preference number: 3 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPLRESC*ILSCWY
Trigger: ATACCAACAAGACAATATCAAGCAGCTCTCCCTAAG...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGTTGGTCCTATCTCTaGTGGATTGGGACACAGATA +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCCWSYL*WIGTQI
Trigger: TATCTGTGTCCCAATCCACAAGAGATAGGACCAACA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGGGGAATTTCTTGTTaGCGACCTTGGAGAAGAATC +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRGISC*RPWRRI
Trigger: GATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR TCA 72 bp ACTTTTCGTTGTTCAAACCATTCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATGGAAATTTTCAGCAGT +
Preference number: 3 (lower is better)
Translates to: TFRCSNHSFTNS*GRPTAMEIFSS
Trigger: ACTGCTGAAAATTTCCATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGAATGGTTTGAACAACGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp ATTCGTAACACTGTTGTGGAGTTCTGCTATAGATGGTaGTGTTATGGAGTCCATAGGTTTTACAGGAGACCT +
Preference number: 3 (lower is better)
Translates to: IRNTVVEFCYRW*CYGVHRFYRRP
Trigger: AGGTCTCCTGTAAAACCTATGGACTCCATAACATCACCATCTATAGCAGAACTCCACAACAGTGTTACGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp AAGAACACATCTGATGTTACTAAAATGCACATCTCTTaGTTGTGGAGGGGAATTTCTTGTTTGCGACCTTGG +
Preference number: 3 (lower is better)
Translates to: KNTSDVTKMHIS*LWRGISCLRPW
Trigger: CCAAGGTCGCAAACAAGAAATTCCCCTCCACAACCAAGAGATGTGCATTTTAGTAACATCAGATGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTACTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTAGATGGTGTTTATATTaGAAGGCCTTGCCACACTCT +
Preference number: 3 (lower is better)
Translates to: KRRALLSTKTPALLGTMFRWCLY*KALPHS
Trigger: AGAGTGTGGCAAGGCCTTCAAATATAAACACCATCT...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGAAACCAATACATTTCTaGCTGCTGATGTGCGAACTG +
Preference number: 3 (lower is better)
Translates to: ESTDDKRRALLSTKTPALKPIHF*LLMCEL
Trigger: CAGTTCGCACATCAGCAGCAAGAAATGTATTGGTTT...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp TTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTCTTGGCGTAAATGTTTaGAGGAAATTTCAGACACTT +
Preference number: 3 (lower is better)
Translates to: LRRQPSFRHGTWVMFFFLLGVNV*RKFQTL
Trigger: AAGTGTCTGAAATTTCCTCAAAACATTTACGCCAAG...AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTGCACATTCATTGTTaGTTGGTCCTATCTCTTGTG +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLHIHC*LVLSLV
Trigger: CACAAGAGATAGGACCAACAAACAATGAATGTGCAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGAGAAAGAGTTAGGTaGCACATTCATTGTTTGTTG +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGERVR*HIHCLL
Trigger: CAACAAACAATGAATGTGCAACCTAACTCTTTCTCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTCTTGTTTGCGACCTaGGAGAAGAATCTTAAGACA +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFLFAT*EKNLKT
Trigger: TGTCTTAAGATTCTTCTCCAAGGTCGCAAACAAGAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGGAAGATGTATGTTTaGTTTAGCTCTTGCGGAGAA +
Preference number: 3 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRKMYV*FSSCGE
Trigger: TTCTCCGCAAGAGCTAAACAAAACATACATCTTCCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGAGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTT +
Preference number: 3 (lower is better)
Translates to: STGLILVKWEGFVSLRGGEPVLI*FLIRPF
Trigger: AAATGGCCGAATGAGAAACAATATCAAGACGGGTTC...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp AGATGTATGTTTTGTTTAGCTCTTGCGGAGAAATTCTaGTACGCATCTCTCTTCCCAGTTATTTCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: RCMFCLALAEKF*YASLFPVISGL
Trigger: TAGGCCTGAAATAACTGGGAAGAGAGATGCGTATCAGAATTTCTCCGCAAGAGCTAAACAAAACATACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTTTCAACCTTCACATCTaGGCTAAAAAGCATATTTGG +
Preference number: 3 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGFNLHI*AKKHIW
Trigger: CCAAATATGCTTTTTAGCCAAGATGTGAAGGTTGAA...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCTCTGCCAGAAAGTTaGAAGATAGAGCTAAAAACA +
Preference number: 3 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPLPES*KIELKT
Trigger: TGTTTTTAGCTCTATCTTCAAACTTTCTGGCAGAGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR TCA 72 bp CAGGGGTTTTGTAACATGTACCACACAGAAAGCTTCTaGACAATATTTAGGCTTCTCTGTTTCTCCCTAAAA +
Preference number: 3 (lower is better)
Translates to: QGFCNMYHTESF*TIFRLLCFSLK
Trigger: TTTTAGGGAGAAACAGAGAAGCCTAAATATTGTTCAGAAGCTTTCTGTGTGGTACATGTTACAAAACCCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR CCA 72 bp GTAGGCGACTCGTTTAATAGAGAAAGTTTTAGCTTGTaGCATATTCAGCATCATATTATCTCGGTGCCATTT +
Preference number: 3 (lower is better)
Translates to: VGDSFNRESFSL*HIQHHIISVPF
Trigger: AAATGGCACCGAGATAATATGATGCTGAATATGCCACAAGCTAAAACTTTCTCTATTAAACGAGTCGCCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR-3UTR CAA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGATCCTCCAGTTTTCTTTaGGCAAAGTATTCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: STGLILVKWEGFVSLRGGSSSFL*AKYSSK
Trigger: TTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGA...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR TCA 72 bp TTCATTTCTTTCTCTGAAACAAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCATGTCTCTGTGAGATT +
Preference number: 3 (lower is better)
Translates to: FISFSETSSFRI*FLLQRACLCEI
Trigger: AATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTTGTTTCAGAGAAAGAAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CCA 72 bp TTACAGAACTGGCATGAAAATGGAGTGGATATGTTGTaGTTCTCAATCATTTTGTCATCAGTGACCAAATCT +
Preference number: 3 (lower is better)
Translates to: LQNWHENGVDML*FSIILSSVTKS
Trigger: AGATTTGGTCACTGATGACAAAATGATTGAGAACCACAACATATCCACTCCATTTTCATGCCAGTTCTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR-3UTR CAA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTATTCAACCTTCACATCTaGGCTAAAAAGCATATTTGG +
Preference number: 3 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLFNLHI*AKKHIW
Trigger: CCAAATATGCTTTTTAGCCAAGATGTGAAGGTTGAA...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR TCA 72 bp TGGATATGTTGTGGTTCTCAATCATTTTGTCATCAGTaGCCAAATCTATTAAAGTACGTAGCTTCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: WICCGSQSFCHQ*PNLLKYVASLS
Trigger: AGAAAGAGAAGCTACGTACTTTAATAGATTTGGTCACTGATGACAAAATGATTGAGAACCACAACATATCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CCA 72 bp GAAAGATTTAAGGGAGAAGGAGTATTACTCCTGGAGTaGTCCAATTTTTCAACTGGTTTAATATTGGTAAAA +
Preference number: 3 (lower is better)
Translates to: ERFKGEGVLLLE*SNFSTGLILVK
Trigger: TTTTACCAATATTAAACCAGTTGAAAAATTGGACCACTCCAGGAGTAATACTCCTTCTCCCTTAAATCTTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GADLSLACVSPYAARAGCWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLNGPHR*QAAAGH
Trigger: ATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLNGPHR*QAAAGH
Trigger: ATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTT...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCGTGGGGAGGGATAATTaGAGCGCCCTGAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSVGRDN*SALSVS
Trigger: GCTCACGCTCAGGGCGCTTCAATTATCCCTCCCCAC...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465070.5
CDS-3UTR GCA 90 bp TCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCT +
Preference number: 4 (lower is better)
Translates to: STEACRISLLCQGCSTPPMDSAP*FGSTQA
Trigger: AGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCAT...GGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR GCA 90 bp ACACTAGCTGGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGTCATCCTCACTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: TLAGLVSWSRGLAIPSSSLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR GCA 90 bp ACCGGTGGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTGCTCATTTCTGACTCTCAGAACTGGTACCTaGCACACAACCTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TGGKQQQGISRSECSFLTLRTGT*HTTCPS
Trigger: ACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAG...AGTCAGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCACCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS-3UTR CCA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCCCTGGTCCAGAGGGTTaGCAATACCGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: GADLSLACVSPYAARAGCPGPEG*QYRHPQ
Trigger: CTGAGGATGACGGTATTGCCAACCCTCTGGACCAGG...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCTTTCTTCTTGCCCATTaGCCTCTGGCGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GADLSLACVSPYAARAGCFLLAH*PLACQG
Trigger: GCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAA...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGATACCCAGGCTGGCCTTaGACTCCTGGGTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERYPGWP*TPGFRQ
Trigger: CTGCCTGAACCCAGGAGTTCAAGGCCAGCCTGGGTA...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR TCA 90 bp TGCATCCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGCTTCCCAGGCTCAGGTaGTCCTCCCACCAAAGGATC +
Preference number: 4 (lower is better)
Translates to: CILIHHTSQVGLPLLTLWLPRLR*SSHQRI
Trigger: GATCCTTTGGTGGGAGGATCACCTGAGCCTGGGAAG...CCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR TCA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCCTGACTCCAAGGCTCTaGTCTGCGTGTGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCLTPRL*SACAPR
Trigger: TCGAGGGGCACACGCAGATCAGAGCCTTGGAGTCAG...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTGCGTCCCAGCGCCTaGCTCGGGAGCGTCTACGCG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLRPSA*LGSVYA
Trigger: CGCGTAGACGCTCCCGAGGCAGGCGCTGGGACGCAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637304.1
CDS-3UTR CCA 90 bp TGGTTGGGCACACTAGCTGGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGCCTGGTCCAGAGGGTTaGCAATACCGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: WLGTLAGLVSWSRGLAIPPGPEG*QYRHPQ
Trigger: CTGAGGATGACGGTATTGCCAACCCTCTGGACCAGG...CGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp TGGTTGGGCACACTAGCTGGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGTGTGGGGAGGACTCATaGTTGGGCACACTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: WLGTLAGLVSWSRGLAIPCGEDS*LGTLAG
Trigger: TCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACA...CGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: GADLSLACVSPYAARAGCLDRGF*PHSVIV
Trigger: GACTATGACACTATGGGGCCAGAAGCCACGATCCAG...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp ACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: TSPSLIASNHHYQHLHSFNGPHR*QAAAGH
Trigger: ATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTT...AAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCTTAGTGGCACCATTATaGCTCACTACCGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: GADLSLACVSPYAARAGCLVAPL*LTTGRP
Trigger: CGGTCTTCCGGTAGTGAGTCATAATGGTGCCACTAA...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGGTGGGAATGCGGGAATaGATGGTACAGTGGACACCC +
Preference number: 4 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLVGMRE*MVQWTP
Trigger: GGGTGTCCACTGTACCATTCATTCCCGCATTCCCAC...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGACTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGGGCCATTCAGACAATTaGCCCCTTGTGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLGHSDN*PLVGMR
Trigger: CCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCC...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGATTCAGGCAGTCTACCTaGCTCAGCCTCCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERFRQST*LSLPVC
Trigger: GCACACTGGGAGGCTGAGGCAGGTAGACTGCCTGAA...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR TCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSRFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCAGTGGGAATGCGGGAATaGATGGTACAGTGGACACCC +
Preference number: 4 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPAVGMRE*MVQWTP
Trigger: GGGTGTCCACTGTACCATTCATTCCCGCATTCCCAC...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ATAGCCCCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCATGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: IAPSLVCVQRDKTCRRSPWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...TGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGACATTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRHWPLA*QGETAP
Trigger: AGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATG...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGCCGCTCGAGCTGGGTaGGGTAGGCAAACGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGAARAG*GRQTCS
Trigger: GCTACACGTTTGCCTACCGCACCCAGCTCGAGCGGC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTCCTTGGGTTAGCATTTGGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTaGGGTAGGCAAACGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LLGLAFGADLSLACVSPYAARAG*GRQTCS
Trigger: GCTACACGTTTGCCTACCGCACCCAGCTCGAGCGGC...ATATGGTGACACACAAGCCAGGGACAGATCAGCACCAAATGCTAACCCAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp ATAGCCCCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACATCCCAGGACCCGCTaGCCGAATCAGGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: IAPSLVCVQRDKTCRRSPHPRTR*PNQGQK
Trigger: CTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGATG...TGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTCATCCCAGGACCCGCTaGCCGAATCAGGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: MEMDIFGAPSELVPATQPHPRTR*PNQGQK
Trigger: CTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGATG...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGACCTGCCACACAACCTaGCCCAGTGCTTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLTCHTT*PSALKV
Trigger: GACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCCTCAGAACTGGTACCTaGCACACAACCTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCLRTGT*HTTCPS
Trigger: ACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAG...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCGGCGGGCTGCTTTTaGAGCCCTCAGTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGPAGCF*SPQSQQ
Trigger: TTGCTGGGACTGAGGGCTGCAAAAGCAGCCCGCCGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGATCCAAGGCTCTGATCTaGGTGTGCCCCTCGAACCCC +
Preference number: 4 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRSKALI*VCPSNP
Trigger: GGGGTTCGAGGGGCACACGCAGATCAGAGCCTTGGA...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS-3UTR CCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGAGATGGCAGTTCGCATaGACTCGGCGCCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKRWQFA*TRRPAS
Trigger: CGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCT...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCAGGCGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSRRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGCCT...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS-3UTR CCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAAAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKNGPHR*QAAAGH
Trigger: ATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTT...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGACACCAGCAGCCTACTaGCTCTGCTACGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLTPAAY*LCYEGK
Trigger: CTTTCCTTCGTAGCAGAGCCAGTAGGCTGCTGGTGT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGCCCTACAGCCCCTaGATGGCCTCACACATCTTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGPYSP*MASHIL
Trigger: CAAGATGTGTGAGGCCATTCAGGGGCTGTAGGGCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAACTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTCTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLLALLRRKACFYPNWLSLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCATTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGHWPLA*QGETAP
Trigger: AGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGCCGCTCGAGCTGGGTaGGGTAGGCAAACGTGTAGC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRAARAG*GRQTCS
Trigger: GCTACACGTTTGCCTACCGCACCCAGCTCGAGCGGC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCACCTGCCACACAACCTaGCCCAGTGCTTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCTCHTT*PSALKV
Trigger: GACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGT...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCCCAGCCTTGTGTGTGTaGAGCGTGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSPALCV*SVTKLA
Trigger: TGCAAGTTTTGTCACGCTGCACACACACAAGGCTGG...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLAAYWL*YEGKHV
Trigger: AACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGC...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAGGCCATTCAGACAATTaGCCCCTTGTGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: ALLEASNALLSYLQGRHTGHSDN*PLVGMR
Trigger: CCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCC...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CTTGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTAGATGGCAGTTCGCATaGACTCGGCGCCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LVESRCCARGVPLHPPLFRWQFA*TRRPAS
Trigger: CGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCT...AAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TCGTCTCCTGGTCCAGAGGGTTGGCAATACCGTCATCCTCAGCAATATGAAGCTGTTGGGCACACTAGCTaGACTCGTCTCCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSPGPEGWQYRHPQQYEAVGHTS*TRLLVQ
Trigger: CTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAAC...AGCTTCATATTGCTGAGGATGACGGTATTGCCAACCCTCTGGACCAGGAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp TCGTCTCCTGGTCCAGAGGGTTGGCAATACCGTCATCCTCAGCAATATGAAGCTCTTGGCAACAGAGCTTaGCTCACGTGTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SSPGPEGWQYRHPQQYEALGNRA*LTCGED
Trigger: GTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAG...AGCTTCATATTGCTGAGGATGACGGTATTGCCAACCCTCTGGACCAGGAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTGCCCATTGGCCTCTaGCGTGCCAAGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLPIGL*RAKARQ
Trigger: CTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGCAGGAAACACAAACCTaGGGACGGACTGACGTGTTA +
Preference number: 4 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLQETQT*GRTDVL
Trigger: TAACACGTCAGTCCGTCCCCAGGTTTGTGTTTCCTG...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR CCA 90 bp ACACTAGCTGGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGTCATCCTCAACCCGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: TLAGLVSWSRGLAIPSSSTRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGGGT...TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCAGAGCGCCCTCAGAACTaGTACCTGCCACACAACCTG +
Preference number: 4 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSERPQN*YLPHNL
Trigger: CAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTC...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGACAATTGCCCCCTTGTaGGAATGCGGGAATGAATGG +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLTIAPL*ECGNEW
Trigger: CCATTCATTCCCGCATTCCCACAAGGGGGCAATTGT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACAATTGCCCCCTTGTaGGAATGCGGGAATGAATGG +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSTIAPL*ECGNEW
Trigger: CCATTCATTCCCGCATTCCCACAAGGGGGCAATTGT...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CCTGGTCCAGAGGGTTGGCAATACCGTCATCCTCAGCAATATGAAGCTTGTCTTGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATA +
Preference number: 4 (lower is better)
Translates to: PGPEGWQYRHPQQYEACLGGHPP*SAASLI
Trigger: TATCAATGAAGCAGCCGATCATGGCGGATGGCCCCC...AAGACAAGCTTCATATTGCTGAGGATGACGGTATTGCCAACCCTCTGGACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR TCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTGCTGTGTCACTGCGCTaGAGGTACTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIAVSLR*RYSSML
Trigger: CAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGC...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGCTGTGTCACTGCGCTaGAGGTACTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGAVSLR*RYSSML
Trigger: CAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TCAATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACATACAGTAAGACCGCTTaGCTCAGGGCTAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: SIVCEHCKPALPLSVTGTYSKTA*LRARRT
Trigger: GGTCCGCCTAGCCCTGAGTCAAGCGGTCTTACTGTA...TGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470879.5
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGGCCCTACAGCCCCTaGATGGCCTCACACATCTTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGPYSP*MASHIL
Trigger: CAAGATGTGTGAGGCCATTCAGGGGCTGTAGGGCCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATACTCCACTACAGCCTTaGCCTTCCCAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDTPLQP*PSQAQV
Trigger: CACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGT...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR GCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGCACGCAGGCTCGATCTaGGAAGTCTTGTTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLHAGSI*EVLFVV
Trigger: AACTACAAACAAGACTTCGCAGATCGAGCCTGCGTG...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR GCA 90 bp GAGGGTTGGCAATACCGTCATCCTCAGCAATATGAAGCTTGTCTTCCTCATCTGTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EGWQYRHPQQYEACLPHLWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...CAGATGAGGAAGACAAGCTTCATATTGCTGAGGATGACGGTATTGCCAACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCATTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRHWPLA*QGETAP
Trigger: AGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTGTGTGTCACCATATaGCGCTCGAGCTGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLCVTI*RSSWVR
Trigger: CCGCACCCAGCTCGAGCGGCATATGGTGACACACAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAACCTGCCACACAACCTaGCCCAGTGCTTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: ALLEASNALLSYLQGRHTTCHTT*PSALKV
Trigger: GACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGT...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGACTCAGAACTGGTACCTaGCACACAACCTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRLRTGT*HTTCPS
Trigger: ACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAG...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCAGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPAAAYWL*YEGKHV
Trigger: AACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGC...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGGGCCATTCAGACAATTaGCCCCTTGTGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKGHSDN*PLVGMR
Trigger: CCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCC...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAAGAACCGGCGGGCTaGTTTTGCAGCCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGKEPAG*FCSPQS
Trigger: GGACTGAGGGCTGCAAAAGCAGCCCGCCGGTTCTTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638007.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGTTGGGCACACTAGCTaGACTCGTCTCCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGVGHTS*TRLLVQ
Trigger: CTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAAC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGATGTGGGGAGGACTCATaGTTGGGCACACTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRCGEDS*LGTLAG
Trigger: TCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACA...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp TGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCAAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: CRISLLCQGCSTPPSLISSLAHV*GGLMVG
Trigger: CCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT...TGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCISLAHV*GGLMVG
Trigger: CCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSLAHV*GGLMVG
Trigger: CCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTTGGCAACAGAGCTTaGCTCACGTGTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLGNRA*LTCGED
Trigger: GTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTGCCCATTGGCCTCTaGCGTGCCAAGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLPIGL*RAKARQ
Trigger: CTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GTACTCCTCGATGCTGACTGCATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCCTCCTAAAGGGCTGGTaGCTCCAAGCCCACCATTCA +
Preference number: 4 (lower is better)
Translates to: VLLDADCMTIAFLQFSFGLLKGW*LQAHHS
Trigger: TGAATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAG...GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGTGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TCAATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAGAGCGCCCTCAGAACTaGTACCTGCCACACAACCTG +
Preference number: 4 (lower is better)
Translates to: SIVCEHCKPALPLSVTGTERPQN*YLPHNL
Trigger: CAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTC...TGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACATGGACTGTCACTCTATaGACACCAGCAGCCTACTGG +
Preference number: 4 (lower is better)
Translates to: ALLEASNALLSYLQGRHTWTVTL*TPAAYW
Trigger: CCAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCA...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCAACAATTGCCCCCTTGTaGGAATGCGGGAATGAATGG +
Preference number: 4 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPATIAPL*ECGNEW
Trigger: CCATTCATTCCCGCATTCCCACAAGGGGGCAATTGT...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGACAGGTTGGAGCATGGTaGTGGCCTGAACATAACTAC +
Preference number: 4 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERQVGAW*WPEHNY
Trigger: GTAGTTATGTTCAGGCCACCACCATGCTCCAACCTG...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR CAA 72 bp TCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGPSTEACRIS*LCQGCSTPPSL
Trigger: AAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCGATGCTGACTGCATaGCCATCGCGTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSMLTA*PSRSSS
Trigger: ACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGTACTCCTCGATGCTaGCTGCATGACCATCGCGTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGTPRC*LHDHRV
Trigger: AACGCGATGGTCATGCAGTCAGCATCGAGGAGTACC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTGGTACTCCTCGATGCTaGCTGCATGACCATCGCGTT +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIGTPRC*LHDHRV
Trigger: AACGCGATGGTCATGCAGTCAGCATCGAGGAGTACC...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGCTGTGTCACTGCGCTaGAGGTACTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRAVSLR*RYSSML
Trigger: CAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTGATGTGCTCCTTCAGTaGTGTCAAGCGCTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GFWVNNGCVTALKVLLDADVLLQ*CQALVA
Trigger: GGCTACAAGCGCTTGACATCACTGAAGGAGCACATC...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGACTATGTTTTCATaGGGCTGCAGGACCGCCTTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGTMFS*GCRTAL
Trigger: CAAGGCGGTCCTGCAGCCTCATGAAAACATAGTCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGACGTGCATGTCTCTGTaGGATTTTTCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLTCMSL*DFSEAD
Trigger: ATCAGCCTCTGAAAAATCTCACAGAGACATGCACGT...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TGCATCCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGTCCGAAAGGCAAAAATaGTCATGTTCCGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CILIHHTSQVGLPLLTLWSERQK*SCSAPE
Trigger: TTCTGGAGCGGAACATGATCATTTTTGCCTTTCGGA...CCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGGATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR GCA 90 bp GCTGCATTGGACTCTGAGCAGATGGATGAACTCCTAAAGGGCTGGTGGCTCCAATCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: AALDSEQMDELLKGWWLQSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...TTGGAGCCACCAGCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTCCTCGATGCTGACTaGATGACCATCGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLLDAD*MTIAFL
Trigger: GAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTGTGTGTCACCATATaGCGCTCGAGCTGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLCVTI*RSSWVR
Trigger: CCGCACCCAGCTCGAGCGGCATATGGTGACACACAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCAATCTCCCGCTCCGAGTaGTCATTTCTGACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSISRSE*SFLTPR
Trigger: CCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGAT...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCCAGCGTGACAAAACTTaGAGAAGATCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSQRDKT*RRSPQR
Trigger: TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTG...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCAGCCCCCTTGTGGGAATaGGGGAATGAATGGTACAGT +
Preference number: 4 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSAPLWE*GNEWYS
Trigger: ACTGTACCATTCATTCCCGCATTCCCACAAGGGGGC...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCTGGTCCAGAGGGTTaGCAATACCGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGPGPEG*QYRHPQ
Trigger: CTGAGGATGACGGTATTGCCAACCCTCTGGACCAGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTTGGGCACACTAGCTaGACTCGTCTCCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVGHTS*TRLLVQ
Trigger: CTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGTGGGGAGGACTCATaGTTGGGCACACTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGCGEDS*LGTLAG
Trigger: TCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSLAHV*GGLMVG
Trigger: CCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTTGGCAACAGAGCTTaGCTCACGTGTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLGNRA*LTCGED
Trigger: GTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGATTGTTAATTGCGGTCTaGATCGTGGCTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRLLIAV*IVASGP
Trigger: GGGGCCAGAAGCCACGATCCAGACCGCAATTAACAA...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTTCTTCTTGCCCATTaGCCTCTGGCGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFLLAH*PLACQG
Trigger: GCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGAACTCCTAAAGGGCTaGTGGCTCCAAGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGELLKG*WLQAHH
Trigger: ATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAGTTC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGGGAGGGTTACTGTTaGGAGCTAACGGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGWEGYC*ELTAWS
Trigger: GCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGAAGGCGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRRRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGCCT...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS-3UTR CCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAAACGGGCCGCACCGGTaGCAAGCAGCAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLENGPHR*QAAAGH
Trigger: ATGCCCTGCTGCTGCTTGCCACCGGTGCGGCCCGTT...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGTGGACTGTCACTCTATaGACACCAGCAGCCTACTGG +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKWTVTL*TPAAYW
Trigger: CCAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCA...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTTCCTTTCCGAGTCTaGGCTGGCGCTCGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFPFRV*AGARSL
Trigger: AAGCGAACGAGCGCCAGCCCAGACTCGGAAAGGAAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637304.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGAAAGTTGCTCCAAGTaGGCCCGGGCGGTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCESCSK*ARAVPA
Trigger: CGCGGGGACCGCCCGGGCCCACTTGGAGCAACTTTC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637304.1
CDS-3UTR CCA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATCCCTCCTCCCCAGACTaGTCACTGTGTAGTGTCATG +
Preference number: 4 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDPSSPD*SLCSVM
Trigger: CATGACACTACACAGTGACCAGTCTGGGGAGGAGGG...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCGATGCTGACTGCATaGCCATCGCGTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSMLTA*PSRSSS
Trigger: ACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGTACTCCTCGATGCTaGCTGCATGACCATCGCGTT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGTPRC*LHDHRV
Trigger: AACGCGATGGTCATGCAGTCAGCATCGAGGAGTACC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGATGTGCTCCTTCAGTaGTGTCAAGCGCTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGDVLLQ*CQALVA
Trigger: GGCTACAAGCGCTTGACATCACTGAAGGAGCACATC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCTCGTGGCGGTACTTaGTGTGCTCCTTCAGTGATG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSRGGT*CAPSVM
Trigger: CATCACTGAAGGAGCACATCAAGTACCGCCACGAGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGACCTTGTTCCTCAGGTTaGGAGCATGGATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRPCSSG*EHGSFM
Trigger: CATGAAGGATCCATGCTCTCAACCTGAGGAACAAGG...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGGACTATGTTTTCATaGGGCTGCAGGACCGCCTTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGTMFS*GCRTAL
Trigger: CAAGGCGGTCCTGCAGCCTCATGAAAACATAGTCCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ACCGGTGGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTGCTCATTTCTGACTTTCTTTTTCTTTTCTTaGAGTCTCCGCAAACGCTTT +
Preference number: 4 (lower is better)
Translates to: TGGKQQQGISRSECSFLTFFFFS*SLRKRF
Trigger: AAAGCGTTTGCGGAGACTTCAAGAAAAGAAAAAGAA...AGTCAGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCACCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS-3UTR TCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACATCATGTGAAAACGTaGTCGCCAAGTTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPAHHVKT*SPSFSL
Trigger: CAGAGAGAAACTTGGCGATCACGTTTTCACATGATG...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000465070.5
CDS-3UTR TCA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTAGAGACGAGAGACCCTaGAACACGCGCCACCTATCT +
Preference number: 4 (lower is better)
Translates to: SLLALLRRKACFYPNWLSRDERP*NTRHLS
Trigger: AGATAGGTGGCGCGTGTTTCAGGGTCTCTCGTCTCT...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465070.5
CDS-3UTR TCA 90 bp ACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTCCGAGTGCTCATTTCTaGCTCCAAGGCGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSPSLIASNHHYQHLHSFPSAHF*LQGVFP
Trigger: AGGAAAAACGCCTTGGAGTCAGAAATGAGCACTCGG...AAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS-3UTR TCA 90 bp TCAATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SIVCEHCKPALPLSVTGTRFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...TGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: IAPSLVCVQRDKTCRRSPPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...TGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGGGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTCCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: TSPSLIASNHHYQHLHSFPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...AAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTCACTCCCTCTCTCTGTaGCAGGCACAAAATAGTGTC +
Preference number: 4 (lower is better)
Translates to: TSPSLIASNHHYQHLHSFHSLSL*QAQNSV
Trigger: GACACTATTTTGTGCCTGTCACAGAGAGAGGGAGTG...AAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGAATCCTTCTGCCCTTTTaGACACAAGCTAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERILLPF*TQANPL
Trigger: CAGAGGATTAGCTTGTGTTCAAAAGGGCAGAAGGAT...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR GCA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTTCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: MEMDIFGAPSELVPATQPSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCATCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAACTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLELVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCCTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTCTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTCCTCGATGCTGACTaGATGACCATCGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLLDAD*MTIAFL
Trigger: GAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp GCTGCATTGGACTCTGAGCAGATGGATGAACTCCTAAAGGGCTGGTGGCTCCAATGGCGGTACTTGATGTaGTCCTTCAGTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: AALDSEQMDELLKGWWLQWRYLM*SFSDVK
Trigger: CTTGACATCACTGAAGGAGCACATCAAGTACCGCCA...TTGGAGCCACCAGCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCGCCTTCTTTCTCGTaGTCCTTCTCGCTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSPSFS*SFSLSP
Trigger: TGGCGAGAGCGAGAAGGAGCACGAGAAAGAAGGCGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGC +
Preference number: 4 (lower is better)
Translates to: REQLLRPSLPLTITTSTSKSNKL*KLQTGR
Trigger: GCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTT...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCCAGCGTGACAAAACTTaGAGAAGATCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCQRDKT*RRSPQR
Trigger: TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTG...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGCAAATAATGAGGAGGTaGCTGGATGTTTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLQIMRR*LDVSRL
Trigger: AAGCCTTGAAACATCCAGGCACCTCCTCATTATTTG...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGGCTCTGATCTGCGTGTaGCCCTCGAACCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLALICV*PSNPHL
Trigger: GAGATGGGGGTTCGAGGGGCACACGCAGATCAGAGC...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTGCCACTGAAGTTCAGAGACCAAAGGCATTTGTAAAAAGCTCCCCTTCTCCTAGATGGCAGTTCGCATaGACTCGGCGCCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: FATEVQRPKAFVKSSPSPRWQFA*TRRPAS
Trigger: CGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCT...AGGAGAAGGGGAGCTTTTTACAAATGCCTTTGGTCTCTGAACTTCAGTGGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGATTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCTGGTCCAGAGGGTTaGCAATACCGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPGPEG*QYRHPQ
Trigger: CTGAGGATGACGGTATTGCCAACCCTCTGGACCAGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGTGGGGAGGACTCATaGTTGGGCACACTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRCGEDS*LGTLAG
Trigger: TCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLDRGF*PHSVIV
Trigger: GACTATGACACTATGGGGCCAGAAGCCACGATCCAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTGTTAATTGCGGTCTaGATCGTGGCTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLLIAV*IVASGP
Trigger: GGGGCCAGAAGCCACGATCCAGACCGCAATTAACAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTTCTTCTTGCCCATTaGCCTCTGGCGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFLLAH*PLACQG
Trigger: GCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTGGGCAAAAGCATCTaGAGTTCCAGGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLGKSI*SSRWQV
Trigger: GACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGCAGGTCAGCAGTTaGGCAAAAGCATCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGQVSS*AKASGV
Trigger: AACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTGTGCTGATCTGTCCCTaGCTTGTGTGTCACCATATG +
Preference number: 4 (lower is better)
Translates to: GFWVNNGCVTALKVLLDAVLICP*LVCHHM
Trigger: CATATGGTGACACACAAGCCAGGGACAGATCAGCAC...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTCCTAAAGGGCTGGTaGCTCCAAGCCCACCATTCA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLLKGW*LQAHHS
Trigger: TGAATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGAACTCCTAAAGGGCTaGTGGCTCCAAGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRELLKG*WLQAHH
Trigger: ATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAGTTC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGGGAGCTAACGGCTTaGAGCTTCTTTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGWELTA*SFFPGM
Trigger: CATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGGGAGGGTTACTGTTaGGAGCTAACGGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRWEGYC*ELTAWS
Trigger: GCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCGTGTATGAACTACTGTaGGAGTTTTTAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: GADLSLACVSPYAARAGCVYELL*EFLEDV
Trigger: CACATCTTCTAAAAACTCCCACAGTAGTTCATACAC...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTTCTAAAGGCTCAGCCTaGAGCTCCTCAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GFWVNNGCVTALKVLLDASKGSA*SSSEEK
Trigger: CTTCTCTTCTGAGGAGCTCCAGGCTGAGCCTTTAGA...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGAAGCCGCGAAGTGTaGGGGAGAAAAAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGRSREV*GRKRWK
Trigger: CTTCCACCTTTTTCTCCCCCACACTTCGCGGCTTCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CCA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTTGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGAAAGATAACCAAGTCTaGACTGACAGTGATCCGAAG +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLKDNQV*TDSDPK
Trigger: CTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCAGAGCGCCCTCAGAACTaGTACCTGCCACACAACCTG +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSERPQN*YLPHNL
Trigger: CAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTC...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACGAATGCGGGAATGAATaGTACAGTGGACACCCCAGC +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYECGNE*YSGHPS
Trigger: GCTGGGGTGTCCACTGTACCATTCATTCCCGCATTC...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGACAATTGCCCCCTTGTaGGAATGCGGGAATGAATGG +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKTIAPL*ECGNEW
Trigger: CCATTCATTCCCGCATTCCCACAAGGGGGCAATTGT...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGAGGCAAAGGCTTCCATaGAGCCTACTGATTATTATC +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLRQRLP*SLLIII
Trigger: GATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCTACAGCCCCTGAATaGCCTCACACATCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPTAPE*PHTSWS
Trigger: GCTCCAAGATGTGTGAGGCCATTCAGGGGCTGTAGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGACCCCTCCTGACACTCTaGAAAGAGACATCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERPLLTL*KETSVF
Trigger: AAAAACAGATGTCTCTTTCCAGAGTGTCAGGAGGGG...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR CCA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATAGGGAAACTCCAGTCTaGCCACAGGGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDRETPV*PQGPEE
Trigger: TTCTTCTGGACCCTGTGGCCAGACTGGAGTTTCCCT...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR CAA 72 bp TCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATT +
Preference number: 4 (lower is better)
Translates to: SGPSTEACRISL*CQGCSTPPSLI
Trigger: AATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
3UTR CAA 72 bp AAGGTGTCTGACTTGGCCATTCAGACAATTGCCCCCTaGTGGGAATGCGGGAATGAATGGTACAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: KVSDLAIQTIAP*WECGNEWYSGH
Trigger: GTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCAAGTCAGACACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CAA 72 bp GTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATaGGACTCTGAGCAGATGGATGAACTCCTAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VKGLPSLHLSAA*DSEQMDELLKG
Trigger: GCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 72 bp TCTTTTGTGGGAGGGTTACTGTTGGGAGCTAACGGCTaGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: SFVGGLLLGANG*ELLSRDGDLEF
Trigger: AAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGATGTGCTCCTTCAGTaGTGTCAAGCGCTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRDVLLQ*CQALVA
Trigger: GGCTACAAGCGCTTGACATCACTGAAGGAGCACATC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCTCGTGGCGGTACTTaGTGTGCTCCTTCAGTGATG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSRGGT*CAPSVM
Trigger: CATCACTGAAGGAGCACATCAAGTACCGCCACGAGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GTACTCCTCGATGCTGACTGCATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCGGGAAGAACCCGTCTTaGTATTGTTTCTCATTCGGC +
Preference number: 4 (lower is better)
Translates to: VLLDADCMTIAFLQFSFGGKNPS*YCFSFG
Trigger: GCCGAATGAGAAACAATATCAAGACGGGTTCTTCCC...GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCTTGTTCCTCAGGTTaGGAGCATGGATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGPCSSG*EHGSFM
Trigger: CATGAAGGATCCATGCTCTCAACCTGAGGAACAAGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTAGTGGCACCATTATaGCTCACTACCGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLVAPL*LTTGRP
Trigger: CGGTCTTCCGGTAGTGAGTCATAATGGTGCCACTAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGCTGCAGGACCGCCTTaGTCTCTTCATTCATCTTAC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGAAGPP*SLHSSY
Trigger: GTAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTGCTGCAGGACCGCCTTaGTCTCTTCATTCATCTTAC +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIAAGPP*SLHSSY
Trigger: GTAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGC...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGTCCTTGTATGGGTTaGTGGGGCTTGTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGPCMG*WGLSFL
Trigger: AAGGAATGACAAGCCCCATCAACCCATACAAGGACC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSFTNS*GRPTAM
Trigger: CATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 4 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCSSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTCCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: SLLALLRRKACFYPNWLSPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTTGTGTGTGTGCAGCGTaGCAAAACTTGCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: MEMDIFGAPSELVPATQPCVCAA*QNLQKI
Trigger: GATCTTCTGCAAGTTTTGTCACGCTGCACACACACA...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGACACCCCAGCACCATTaGCGTTATAAACATGTAAAT +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLTPQHH*RYKHVN
Trigger: ATTTACATGTTTATAACGTCAATGGTGCTGGGGTGT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACATTCCAAGTGGTAAGCTaGTGCTGTTGGCATAAACAG +
Preference number: 4 (lower is better)
Translates to: ALLEASNALLSYLQGRHTFQVVS*CCWHKQ
Trigger: CTGTTTATGCCAACAGCATCAGCTTACCACTTGGAA...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGAAGGTGGCTGTTTCTaGATTAGTCAGCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGEGGCF*ISQPSQ
Trigger: CTGTGAGGGCTGACTAATTCAGAAACAGCCACCTTC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACTCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR GCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LRRQPSFRHGTWVMFFFLWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR GCA 90 bp TGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCAAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: CRISLLCQGCSTPPSLISRISLL*QGCSTP
Trigger: TGGAGTGGAACACCCCTGGCACAACAACGAGATTCT...TGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGRISLL*QGCSTP
Trigger: TGGAGTGGAACACCCCTGGCACAACAACGAGATTCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGCCGCTCGAGCTGGGTaGGGTAGGCAAACGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCAARAG*GRQTCS
Trigger: GCTACACGTTTGCCTACCGCACCCAGCTCGAGCGGC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGATTGTGTGTCACCATATaGCGCTCGAGCTGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRLCVTI*RSSWVR
Trigger: CCGCACCCAGCTCGAGCGGCATATGGTGACACACAA...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAAGACCGTATGAGGGAATaGACACGGCGGTACAGTAAG +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKDRMRE*TRRYSK
Trigger: CTTACTGTACCGCCGTGTGCATTCCCTCATACGGTC...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470879.5
CDS-3UTR GCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAACATCCCAGGACCCGCTaGCCGAATCAGGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEHPRTR*PNQGQK
Trigger: CTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGATG...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGGACACCAGCAGCCTACTGAGGGATAACCATTTCTaGTCTTCTGATTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPPLVLVDCHSMDTSSLLRDNHF*SSDCFS
Trigger: GGAGAAACAATCAGAAGAGCAGAAATGGTTATCCCT...CAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGATTGGGACACAGATATaGCCCATGGGCAACAGAGAC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGIGTQI*PMGNRD
Trigger: GTCTCTGTTGCCCATGGGGCATATCTGTGTCCCAAT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGCAAGGCAGGGTCTaGCCACCCTCCTCTACTTCG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGQGRV*PPSSTS
Trigger: CGAAGTAGAGGAGGGTGGGCAGACCCTGCCTTGCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCGGCGGGCTGCTTTTaGAGCCCTCAGTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPAGCF*SPQSQQ
Trigger: TTGCTGGGACTGAGGGCTGCAAAAGCAGCCCGCCGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCAGATGGCAGTTCGCATaGACTCGGCGCCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGRWQFA*TRRPAS
Trigger: CGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCACGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGCTTGGCAACAGAGCTTaGCTCACGTGTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVLGNRA*LTCGED
Trigger: GTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAG...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLDRGF*PHSVIV
Trigger: GACTATGACACTATGGGGCCAGAAGCCACGATCCAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTGTTAATTGCGGTCTaGATCGTGGCTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLLIAV*IVASGP
Trigger: GGGGCCAGAAGCCACGATCCAGACCGCAATTAACAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLLRGF*VNNGCV
Trigger: GACACAGCCATTATTTACCCAGAAGCCCCTGAGGAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCILLRGF*VNNGCV
Trigger: GACACAGCCATTATTTACCCAGAAGCCCCTGAGGAG...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTGGGCAAAAGCATCTaGAGTTCCAGGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLGKSI*SSRWQV
Trigger: GACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGTGCTGATCTGTCCCTaGCTTGTGTGTCACCATATG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGVLICP*LVCHHM
Trigger: CATATGGTGACACACAAGCCAGGGACAGATCAGCAC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCAGGGATGGGGACCTaGAATTTGAGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGPGMGT*NLSTGR
Trigger: TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGGGAGCTAACGGCTTaGAGCTTCTTTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRWELTA*SFFPGM
Trigger: CATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCTAAAGGCTCAGCCTaGAGCTCCTCAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSKGSA*SSSEEK
Trigger: CTTCTCTTCTGAGGAGCTCCAGGCTGAGCCTTTAGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATGAAACTGTCAAAACTTaGAGAAGGGGGACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: VESRCCARGVPLHPPLFHETVKT*RRGTSE
Trigger: CTCCGAGGTCCCCCTTCTCCAAGTTTTGACAGTTTC...ATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGAAGCCGCGAAGTGTaGGGGAGAAAAAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRSREV*GRKRWK
Trigger: CTTCCACCTTTTTCTCCCCCACACTTCGCGGCTTCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CCA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTGGAAGGTGGCGGGATaGGGAGGCAGACCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYWKVAG*GGRPSS
Trigger: GGAAGAGGGTCTGCCTCCCCATCCCGCCACCTTCCA...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAATGGACTGTCACTCTATaGACACCAGCAGCCTACTGG +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKWTVTL*TPAAYW
Trigger: CCAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCA...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGCTCTTGGAGAAAATaGGCAGGGGTGTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGSWRK*AGVFSC
Trigger: ACAACTGAACACCCCTGCCCATTTTCTCCAAGAGCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGAAACGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKKRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTTT...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS-3UTR CCA 90 bp GCTGCATTGGACTCTGAGCAGATGGATGAACTCCTAAAGGGCTGGTGGCTCCAAGAACAAGGAAGATTCTaGACCATCTACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: AALDSEQMDELLKGWWLQEQGRF*TIYRGL
Trigger: CAAGCCTCTGTAGATGGTCCAGAATCTTCCTTGTTC...TTGGAGCCACCAGCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATA +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEGGHPP*SAASLI
Trigger: TATCAATGAAGCAGCCGATCATGGCGGATGGCCCCC...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AAAACAGGCTCCCTAGAAGCTCATCAACTTTACGAAGAAAGCTACTTGCCAAAGGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATA +
Preference number: 4 (lower is better)
Translates to: KTGSLEAHQLYEESYLPKGGHPP*SAASLI
Trigger: TATCAATGAAGCAGCCGATCATGGCGGATGGCCCCC...CTTTGGCAAGTAGCTTTCTTCGTAAAGTTGATGAGCTTCTAGGGAGCCTGTTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATA +
Preference number: 4 (lower is better)
Translates to: LRRQPSFRHGTWVMFFFLGGHPP*SAASLI
Trigger: TATCAATGAAGCAGCCGATCATGGCGGATGGCCCCC...AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCACACTCTGTGCATTTaGACTTGCGATTACCTGCTC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGHTLCI*TCDYLL
Trigger: GAGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGAAGAACCCGTCTTaGTATTGTTTCTCATTCGGC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGKNPS*YCFSFG
Trigger: GCCGAATGAGAAACAATATCAAGACGGGTTCTTCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCTTGTTCCTCAGGTTaGGAGCATGGATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPCSSG*EHGSFM
Trigger: CATGAAGGATCCATGCTCTCAACCTGAGGAACAAGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTAGTGGCACCATTATaGCTCACTACCGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLVAPL*LTTGRP
Trigger: CGGTCTTCCGGTAGTGAGTCATAATGGTGCCACTAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGACTGATCTGTCTCCTTaGGTCAGTAGTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGTDLSP*VSSQAL
Trigger: CAGAGCTTGACTACTGACTCAAGGAGACAGATCAGT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGCTGCAGGACCGCCTTaGTCTCTTCATTCATCTTAC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRAAGPP*SLHSSY
Trigger: GTAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGTCCTTGTATGGGTTaGTGGGGCTTGTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGPCMG*WGLSFL
Trigger: AAGGAATGACAAGCCCCATCAACCCATACAAGGACC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSFTNS*GRPTAM
Trigger: CATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGGGGACCTGGAATTTaGGTACTGGTAGACTTTTCG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGWGPGI*VLVDFS
Trigger: CGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCAAGCAATTCTCCCTaGAATCCTTGTTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSSNSP*NPCFRW
Trigger: CCAGCGGAAACAAGGATTTCAGGGAGAATTGCTTGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTTCAAGCAATTCTCCCTaGAATCCTTGTTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCISSNSP*NPCFRW
Trigger: CCAGCGGAAACAAGGATTTCAGGGAGAATTGCTTGA...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCAGAGGAGGAGAATCCTaGAAACTCGGTGGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFRGGES*KLGGGW
Trigger: CCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCT...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTACAGTAAGACCGCTTaGCTCAGGGCTAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGYSKTA*LRARRT
Trigger: GGTCCGCCTAGCCCTGAGTCAAGCGGTCTTACTGTA...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000462355.2
ENST00000470879.5
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGCGTGAGCATCATGTaGAAACGTGATCGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSVSIM*KRDRQV
Trigger: AACTTGGCGATCACGTTTTCACATGATGCTCACGCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTGGGGAGGGATAATTaGAGCGCCCTGAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVGRDN*SALSVS
Trigger: GCTCACGCTCAGGGCGCTTCAATTATCCCTCCCCAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR TCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCATCATTTAAGCATCTCTaGAACGGGAGCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSSFKHL*NGSNFS
Trigger: GGAGAAGTTGCTCCCGTTTCAGAGATGCTTAAATGA...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCACCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTTGCGGAGAAATTCTaGTACGCATCTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLAEKF*YASLFP
Trigger: TGGGAAGAGAGATGCGTATCAGAATTTCTCCGCAAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGACACACAGAAAGCTTCTaGACAATATTTAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERHTESF*TIFRLL
Trigger: GAGAAGCCTAAATATTGTTCAGAAGCTTTCTGTGTG...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR GCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCACGCAGGCTCGATCTaGGAAGTCTTGTTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYHAGSI*EVLFVV
Trigger: AACTACAAACAAGACTTCGCAGATCGAGCCTGCGTG...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCACGCAGGCTCGATCTaGGAAGTCTTGTTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGHAGSI*EVLFVV
Trigger: AACTACAAACAAGACTTCGCAGATCGAGCCTGCGTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR GCA 90 bp GAGGGTTGGCAATACCGTCATCCTCAGCAATATGAAGCTTGTCTTCCTCATCTGTCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: EGWQYRHPQQYEACLPHLSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...CAGATGAGGAAGACAAGCTTCATATTGCTGAGGATGACGGTATTGCCAACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR GCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGACTTGTTTGCGCCTCTTaGACCGGGGGCCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGLVCAS*TGGHPP
Trigger: TGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TETYDIAVEQGTLILVLPWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR GCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRISLL*QGCSTP
Trigger: TGGAGTGGAACACCCCTGGCACAACAACGAGATTCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp GTACTCCTCGATGCTGACTGCATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCTGTACCATTGTTAATTaGGGTCTGGATCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VLLDADCMTIAFLQFSFGCTIVN*GLDRGF
Trigger: GAAGCCACGATCCAGACCGCAATTAACAATGGTACA...GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCATTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCHWPLA*QGETAP
Trigger: AGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGGCGGTACTTGATGTaGTCCTTCAGTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGWRYLM*SFSDVK
Trigger: CTTGACATCACTGAAGGAGCACATCAAGTACCGCCA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGAGAAACGTTTCTTaGAGTTTGGGCACTCGTAAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGRNVS*SLGTRK
Trigger: CTTACGAGTGCCCAAACTGCAAGAAACGTTTCTCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ALLEASNALLSYLQGRHTKSNKL*KLQTGR
Trigger: GCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTT...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCAAGGGATAACCATTTCTaGTCTTCTGATTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPARDNHF*SSDCFS
Trigger: GGAGAAACAATCAGAAGAGCAGAAATGGTTATCCCT...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCAACCTGCCACACAACCTaGCCCAGTGCTTTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSTCHTT*PSALKV
Trigger: GACTTTCAAAGCACTGGGGCAGGTTGTGTGGCAGGT...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGCAAGGCAGGGTCTaGCCACCCTCCTCTACTTCG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGQGRV*PPSSTS
Trigger: CGAAGTAGAGGAGGGTGGGCAGACCCTGCCTTGCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp ATTTCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ISSGPSTEACRISLLCQGFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...CCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLLRGF*VNNGCV
Trigger: GACACAGCCATTATTTACCCAGAAGCCCCTGAGGAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTGCCCATTGGCCTCTaGCGTGCCAAGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLPIGL*RAKARQ
Trigger: CTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GTACTCCTCGATGCTGACTGCATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCATCTGGAGTTCCAGGTaGCAGGTCATTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VLLDADCMTIAFLQFSFGIWSSR*QVIFFL
Trigger: CAAGAAGAAAATGACCTGCCACCTGGAACTCCAGAT...GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCTTCATTCTTCTCGTaGCGGTACTTGATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSSFFS*RYLMCS
Trigger: GGAGCACATCAAGTACCGCCACGAGAAGAATGAAGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTGCTGATCTGTCCCTaGCTTGTGTGTCACCATATG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVLICP*LVCHHM
Trigger: CATATGGTGACACACAAGCCAGGGACAGATCAGCAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCAGTAGTCAAGCTCTaGAGGCAAGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSVVKL*RQALAS
Trigger: TGAAGCCAAAGCTTGCCTCCAGAGCTTGACTACTGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGCTGATGCAAAGGGATaGGGCCAGGAAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGADAKG*GQENFL
Trigger: AAGAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCATGTGGTCCTTGTATaGGTTGATGGGGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGHVVLV*VDGACH
Trigger: ATGACAAGCCCCATCAACCCATACAAGGACCACATG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCAGGGATGGGGACCTaGAATTTGAGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPGMGT*NLSTGR
Trigger: TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCTAAAGGCTCAGCCTaGAGCTCCTCAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSKGSA*SSSEEK
Trigger: CTTCTCTTCTGAGGAGCTCCAGGCTGAGCCTTTAGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCGCAGGCTCGATTGTTTaGTGTGTTGCACCCGCGAGG +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGAGSIV*CVAPAR
Trigger: CCTCGCGGGTGCAACACACCAAACAATCGAGCCTGC...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462355.2
CDS-3UTR CCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAACGCCACCTATCTTTGTaGGGAGGGATAATTGAAGCG +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKRHLSL*GGIIEA
Trigger: CGCTTCAATTATCCCTCCCCACAAAGATAGGTGGCG...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465070.5
CDS-3UTR CCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGAAAAGGTGTCTGACTTaGCCATTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKKRCLT*PFRQLP
Trigger: GGGCAATTGTCTGAATGGCCAAGTCAGACACCTTTT...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCAAAAAGGTGTCTGACTTaGCCATTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: IAPSLVCVQRDKTCRRSPKRCLT*PFRQLP
Trigger: GGGCAATTGTCTGAATGGCCAAGTCAGACACCTTTT...TGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGGGGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAAGGCAAAGGCTTCCATaGAGCCTACTGATTATTATC +
Preference number: 4 (lower is better)
Translates to: ALLEASNALLSYLQGRHTRQRLP*SLLIII
Trigger: GATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCT...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCGCCAAGTTTCTCTCTaGGAAAGGATCTGGGATAGA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGRQVSL*ERIWDR
Trigger: TCTATCCCAGATCCTTTCCCAGAGAGAAACTTGGCG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCACAGATATGCCCCATaGGCAACAGAGACCTACATT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGHRYAP*ATETYI
Trigger: AATGTAGGTCTCTGTTGCCCATGGGGCATATCTGTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGCTCTTGGAGAAAATaGGCAGGGGTGTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGSWRK*AGVFSC
Trigger: ACAACTGAACACCCCTGCCCATTTTCTCCAAGAGCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 72 bp CTGGGTAATAAAGAGTCTTTTGTGGGAGGGTTACTGTaGGGAGCTAACGGCTTGGAGCTTCTTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGNKESFVGGLL*GANGLELLSRD
Trigger: ATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCACAAAAGACTCTTTATTACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGCTGTGTCACTGCGCTaGAGGTACTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCAVSLR*RYSSML
Trigger: CAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGTCTCGTGGCGGTACTTaGTGTGCTCCTTCAGTGATG +
Preference number: 4 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVSRGGT*CAPSVM
Trigger: CATCACTGAAGGAGCACATCAAGTACCGCCACGAGA...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCACACTCTGTGCATTTaGACTTGCGATTACCTGCTC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRHTLCI*TCDYLL
Trigger: GAGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGATGGTGTTTATATTTaGAGGCCTTGCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGDGVYI*RPCHTL
Trigger: CAGAGTGTGGCAAGGCCTTCAAATATAAACACCATC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTTACATTTCTTGCTGCTaGTGTGCGAACTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIYISCC*CANCRN
Trigger: GTTCCTACAGTTCGCACATCAGCAGCAAGAAATGTA...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTACATTTCTTGCTGCTaGTGTGCGAACTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGYISCC*CANCRN
Trigger: GTTCCTACAGTTCGCACATCAGCAGCAAGAAATGTA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGGAAGAACCCGTCTTaGTATTGTTTCTCATTCGGC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGKNPS*YCFSFG
Trigger: GCCGAATGAGAAACAATATCAAGACGGGTTCTTCCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGACTGATCTGTCTCCTTaGGTCAGTAGTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRTDLSP*VSSQAL
Trigger: CAGAGCTTGACTACTGACTCAAGGAGACAGATCAGT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAGGTTTTGTTAGCCTaGGAGGAGGATCACAATTCG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGKVLLA*EEDHNS
Trigger: CGAATTGTGATCCTCCTCTCAGGCTAACAAAACCTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCAAGCAATTCTCCCTaGAATCCTTGTTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSSNSP*NPCFRW
Trigger: CCAGCGGAAACAAGGATTTCAGGGAGAATTGCTTGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AAAACAGGCTCCCTAGAAGCTCATCAACTTTACGAAGAAAGCTACTTGCCAAAGAACCTGGGGACGGACTaGCGTGTTACGCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: KTGSLEAHQLYEESYLPKNLGTD*RVTPLL
Trigger: TAGAAGAGGCGTAACACGTCAGTCCGTCCCCAGGTT...CTTTGGCAAGTAGCTTTCTTCGTAAAGTTGATGAGCTTCTAGGGAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTTGCGGAGAAATTCTaGTACGCATCTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLAEKF*YASLFP
Trigger: TGGGAAGAGAGATGCGTATCAGAATTTCTCCGCAAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGCCCTACAGCCCCTaGATGGCCTCACACATCTTG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGPYSP*MASHIL
Trigger: CAAGATGTGTGAGGCCATTCAGGGGCTGTAGGGCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCGATGCATATTTCAGTaGCTAAAAGCCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGRCIFQ*LKAPSH
Trigger: ATGGGAAGGGGCTTTTAGTCACTGAAATATGCATCG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTATCATCTTCAACCCTaGAACAGAGGCCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGYHLQP*NRGPLK
Trigger: TTTCAGAGGGCCTCTGTTTCAGGGTTGAAGATGATA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCACGCAGGCTCGATCTaGGAAGTCTTGTTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRHAGSI*EVLFVV
Trigger: AACTACAAACAAGACTTCGCAGATCGAGCCTGCGTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR GCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGTCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGGATTGGCTTGTTTaGGCCTCTTGCACCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWDWLV*ASCTGG
Trigger: GCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGTACCATTGTTAATTaGGGTCTGGATCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGCTIVN*GLDRGF
Trigger: GAAGCCACGATCCAGACCGCAATTAACAATGGTACA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCATTGGCCTCTGGCGTaGCAAGGCGAGACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVHWPLA*QGETAP
Trigger: AGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAATG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGGCGGTACTTGATGTaGTCCTTCAGTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRWRYLM*SFSDVK
Trigger: CTTGACATCACTGAAGGAGCACATCAAGTACCGCCA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTGTGTGTCACCATATaGCGCTCGAGCTGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLCVTI*RSSWVR
Trigger: CCGCACCCAGCTCGAGCGGCATATGGTGACACACAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGGAGAAACGTTTCTTaGAGTTTGGGCACTCGTAAG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGRNVS*SLGTRK
Trigger: CTTACGAGTGCCCAAACTGCAAGAAACGTTTCTCCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGC +
Preference number: 4 (lower is better)
Translates to: MEMDIFGAPSELVPATQPKSNKL*KLQTGR
Trigger: GCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTT...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATCATCCCAGGACCCGCTaGCCGAATCAGGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYHPRTR*PNQGQK
Trigger: CTTTTGCCCCTGATTCGGGCAGCGGGTCCTGGGATG...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCAGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSAAYWL*YEGKHV
Trigger: AACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGC...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CAATTGCCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCTCCTTTATCTCTTTaGTCTGAAAAGACAACCAAA +
Preference number: 4 (lower is better)
Translates to: QLPPCGNAGMNGTVDTPAPPLSL*SEKTTK
Trigger: TTTGGTTGTCTTTTCAGAGCAAAGAGATAAAGGAGG...TGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCCCTCCTTTATCTCTTTaGTCTGAAAAGACAACCAAA +
Preference number: 4 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCPPLSL*SEKTTK
Trigger: TTTGGTTGTCTTTTCAGAGCAAAGAGATAAAGGAGG...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ATAGCCCCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAAATAATGAGGAGGTaGCTGGATGTTTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: IAPSLVCVQRDKTCRRSPQIMRR*LDVSRL
Trigger: AAGCCTTGAAACATCCAGGCACCTCCTCATTATTTG...TGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGGGGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCCTCCTCTACTTCGTaGACACTTTCTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGPSSTS*TLSSFQ
Trigger: TTGGAAAGAAGAAAGTGTGCACGAAGTAGAGGAGGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CCTTACAGACAATTAGCTGACCTGTTGAATCCTCCACAGGGGACAATACCACAGGCTCCCTCACTGTTTTaGTATCTTAGGTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PYRQLADLLNPPQGTIPQAPSLF*YLRSTS
Trigger: AGAGGTGGACCTAAGATAGCAAAACAGTGAGGGAGC...CTGTGGTATTGTCCCCTGTGGAGGATTCAACAGGTCAGCTAATTGTCTGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCAAGAACCGGCGGGCTaGTTTTGCAGCCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVQEPAG*FCSPQS
Trigger: GGACTGAGGGCTGCAAAAGCAGCCCGCCGGTTCTTG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638087.1
CDS-3UTR CCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGACCACGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRPRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTGG...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTTGGGCACACTAGCTaGACTCGTCTCCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVGHTS*TRLLVQ
Trigger: CTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGGTTGGGCACACTAGCTaGACTCGTCTCCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALVGHTS*TRLLVQ
Trigger: CTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAAC...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSLAHV*GGLMVG
Trigger: CCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTTGGCAACAGAGCTTaGCTCACGTGTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLGNRA*LTCGED
Trigger: GTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGATTGCCCATTGGCCTCTaGCGTGCCAAGGCGAGACAG +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGLPIGL*RAKARQ
Trigger: CTGTCTCGCCTTGGCACGCCAGAGGCCAATGGGCAA...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGATCTGGAGTTCCAGGTaGCAGGTCATTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGIWSSR*QVIFFL
Trigger: CAAGAAGAAAATGACCTGCCACCTGGAACTCCAGAT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGAGGGCAGGTCAGCAGTTaGGCAAAAGCATCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRGQVSS*AKASGV
Trigger: AACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCC...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCAGTAGTCAAGCTCTaGAGGCAAGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSVVKL*RQALAS
Trigger: TGAAGCCAAAGCTTGCCTCCAGAGCTTGACTACTGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGCTGATGCAAAGGGATaGGGCCAGGAAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRADAKG*GQENFL
Trigger: AAGAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCCCAGGGATGGGGACCTaGAATTTGAGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFPGMGT*NLSTGR
Trigger: TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGG...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTATAAAGAGTCTTTTGTaGGAGGGTTACTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GFWVNNGCVTALKVLLDAIKSLL*EGYCWE
Trigger: CTCCCAACAGTAACCCTCCCACAAAAGACTCTTTAT...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp TTTGCCACTGAAGTTCAGAGACCAAAGGCATTTGTAAAAAGCTCCCCTTCTCCTAGAAGCCGCGAAGTGTaGGGGAGAAAAAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FATEVQRPKAFVKSSPSPRSREV*GRKRWK
Trigger: CTTCCACCTTTTTCTCCCCCACACTTCGCGGCTTCT...AGGAGAAGGGGAGCTTTTTACAAATGCCTTTGGTCTCTGAACTTCAGTGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR CCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGAAAGATAACCAAGTCTaGACTGACAGTGATCCGAAG +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKKDNQV*TDSDPK
Trigger: CTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTT...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTGAGCGCCCTCAGAACTaGTACCTGCCACACAACCTG +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGERPQN*YLPHNL
Trigger: CAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTC...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTACACCAGCAGCCTACTaGCTCTGCTACGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSTPAAY*LCYEGK
Trigger: CTTTCCTTCGTAGCAGAGCCAGTAGGCTGCTGGTGT...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTGGACTGTCACTCTATaGACACCAGCAGCCTACTGG +
Preference number: 4 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLWTVTL*TPAAYW
Trigger: CCAGTAGGCTGCTGGTGTCCATAGAGTGACAGTCCA...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACAAAAGGTGTCTGACTTaGCCATTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYKRCLT*PFRQLP
Trigger: GGGCAATTGTCTGAATGGCCAAGTCAGACACCTTTT...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCATCCTCAGCAATATaGAGCTTGTCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SSGPSTEACRISLLCQGCSSSAI*SLSSSS
Trigger: AGATGAGGAAGACAAGCTTCATATTGCTGAGGATGA...ACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCATCCTCAGCAATATaGAGCTTGTCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSSSAI*SLSSSS
Trigger: AGATGAGGAAGACAAGCTTCATATTGCTGAGGATGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCGATGCTGACTGCATaGCCATCGCGTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSMLTA*PSRSSS
Trigger: ACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTTCGATGCTGACTGCATaGCCATCGCGTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KRRALLSTKTPALLGTMFSMLTA*PSRSSS
Trigger: ACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGA...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGTACTCCTCGATGCTaGCTGCATGACCATCGCGTT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGTPRC*LHDHRV
Trigger: AACGCGATGGTCATGCAGTCAGCATCGAGGAGTACC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGCTGTGTCACTGCGCTaGAGGTACTCCTCGATGCTG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVAVSLR*RYSSML
Trigger: CAGCATCGAGGAGTACCTTCAGCGCAGTGACACAGC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCCACACTCTGTGCATTTaGACTTGCGATTACCTGCTC +
Preference number: 4 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFHTLCI*TCDYLL
Trigger: GAGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTG...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGATGGTGTTTATATTTaGAGGCCTTGCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRDGVYI*RPCHTL
Trigger: CAGAGTGTGGCAAGGCCTTCAAATATAAACACCATC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTACATTTCTTGCTGCTaGTGTGCGAACTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRYISCC*CANCRN
Trigger: GTTCCTACAGTTCGCACATCAGCAGCAAGAAATGTA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GCTGCATTGGACTCTGAGCAGATGGATGAACTCCTAAAGGGCTGGTGGCTCCAAAAGCTTTGGCTTCATTaGCTTTTTCCAACGTATAGT +
Preference number: 4 (lower is better)
Translates to: AALDSEQMDELLKGWWLQKLWLH*LFPTYS
Trigger: ACTATACGTTGGAAAAAGTCAATGAAGCCAAAGCTT...TTGGAGCCACCAGCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGACTATGTTTTCATaGGGCTGCAGGACCGCCTTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGTMFS*GCRTAL
Trigger: CAAGGCGGTCCTGCAGCCTCATGAAAACATAGTCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTCAGAAAGTACAGATaGCAAGAGGAGGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLRKYR*QEEGFI
Trigger: AATAAAGCCCTCCTCTTGTCATCTGTACTTTCTGAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCTGGGGACCTGGAATTTaGGTACTGGTAGACTTTTCG +
Preference number: 4 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFWGPGI*VLVDFS
Trigger: CGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCA...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTCTGCTATAGATGGTaGTGTTATGGAGTCCATAGG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFCYRW*CYGVHR
Trigger: CCTATGGACTCCATAACATCACCATCTATAGCAGAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAAGGTTTTGTTAGCCTaGGAGGAGGATCACAATTCG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRKVLLA*EEDHNS
Trigger: CGAATTGTGATCCTCCTCTCAGGCTAACAAAACCTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGCTGTTTGGAGTGTATaGACTACTGTGGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGAVWSV*TTVGVF
Trigger: AAAAACTCCCACAGTAGTTCATACACTCCAAACAGC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAACCTGGGGACGGACTaGCGTGTTACGCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCNLGTD*RVTPLL
Trigger: TAGAAGAGGCGTAACACGTCAGTCCGTCCCCAGGTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCATCATGTGAAAACGTaGTCGCCAAGTTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRHHVKT*SPSFSL
Trigger: CAGAGAGAAACTTGGCGATCACGTTTTCACATGATG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR TCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGRFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLERFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAAACGTGCATGTCTCTGTaGGATTTTTCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKTCMSL*DFSEAD
Trigger: ATCAGCCTCTGAAAAATCTCACAGAGACATGCACGT...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGCCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCATTGGAAGAATGCAGATaGCAAAAACTGTTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSLEECR*QKLLQG
Trigger: TCCTTGCAACAGTTTTTGTCATCTGCATTCTTCCAA...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGTTGGAAGAATGCAGATaGCAAAAACTGTTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKLEECR*QKLLQG
Trigger: TCCTTGCAACAGTTTTTGTCATCTGCATTCTTCCAA...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGCACTCCCTCTCTCTGTaGCAGGCACAAAATAGTGTC +
Preference number: 4 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLHSLSL*QAQNSV
Trigger: GACACTATTTTGTGCCTGTCACAGAGAGAGGGAGTG...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCGATGCATATTTCAGTaGCTAAAAGCCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRCIFQ*LKAPSH
Trigger: ATGGGAAGGGGCTTTTAGTCACTGAAATATGCATCG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTATCATCTTCAACCCTaGAACAGAGGCCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRYHLQP*NRGPLK
Trigger: TTTCAGAGGGCCTCTGTTTCAGGGTTGAAGATGATA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCAGAAGATTTCAAAGTaGCACAGGCAAGACCAACAC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRQKISK*HRQDQH
Trigger: GTGTTGGTCTTGCCTGTGTCACTTTGAAATCTTCTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638087.1
CDS-3UTR GCA 90 bp GAGCATTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: EHLRRQPSFRHGTWVMFFSAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...GAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAATGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGTACCATTGTTAATTaGGGTCTGGATCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRCTIVN*GLDRGF
Trigger: GAAGCCACGATCCAGACCGCAATTAACAATGGTACA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGCTCCTCGATGCTGACTaGATGACCATCGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALLLDAD*MTIAFL
Trigger: GAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAG...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTCCTCGATGCTGACTaGATGACCATCGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLLDAD*MTIAFL
Trigger: GAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTGTGTGTCACCATATaGCGCTCGAGCTGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLCVTI*RSSWVR
Trigger: CCGCACCCAGCTCGAGCGGCATATGGTGACACACAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTTCGCCTTCTTTCTCGTaGTCCTTCTCGCTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: KRRALLSTKTPALLGTMFSPSFS*SFSLSP
Trigger: TGGCGAGAGCGAGAAGGAGCACGAGAAAGAAGGCGA...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCGCCTTCTTTCTCGTaGTCCTTCTCGCTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSPSFS*SFSLSP
Trigger: TGGCGAGAGCGAGAAGGAGCACGAGAAAGAAGGCGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAGACCGTATGAGGGAATaGACACGGCGGTACAGTAAG +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEDRMRE*TRRYSK
Trigger: CTTACTGTACCGCCGTGTGCATTCCCTCATACGGTC...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000462355.2
ENST00000470879.5
CDS-3UTR GCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAGATTGTTTGGTGTGTTaGACCCGCGAGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEDCLVC*TREGIR
Trigger: TCTGATCCCCTCGCGGGTGCAACACACCAAACAATC...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000462355.2
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCGGAAGGGAAAACCTaGCGCTTCAATCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSEGKT*RFNPQV
Trigger: GACCTGCGGATTGAAGCGGCAGGTTTTCCCTTCCGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637045.1
CDS-3UTR GCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCATCTCCCGCTCCGAGTaGTCATTTCTGACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGISRSE*SFLTPR
Trigger: CCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGAT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGATCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRSGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCTCAGAACTGGTACCTaGCACACAACCTGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TETYDIAVEQGTLILVLPLRTGT*HTTCPS
Trigger: ACTGGGGCAGGTTGTGTGGCAGGTACCAGTTCTGAG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAACAGCGTGACAAAACTTaGAGAAGATCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKQRDKT*RRSPQR
Trigger: TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTG...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTTGCCACTGAAGTTCAGAGACCAAAGGCATTTGTAAAAAGCTCCCCTTCTCCTCCAGCCTTGTGTGTGTaGAGCGTGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: FATEVQRPKAFVKSSPSPPALCV*SVTKLA
Trigger: TGCAAGTTTTGTCACGCTGCACACACACAAGGCTGG...AGGAGAAGGGGAGCTTTTTACAAATGCCTTTGGTCTCTGAACTTCAGTGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCGCCCCCTTGTGGGAATaGGGGAATGAATGGTACAGT +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGAPLWE*GNEWYS
Trigger: ACTGTACCATTCATTCCCGCATTCCCACAAGGGGGC...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAACAGAGACCTACATTaGTTTAAAAGAGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGNRDLH*FKRGHR
Trigger: CCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGAGTTAGAGGATTATaGAGCCCTAATGTGCAATCG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGRVRGL*SPNVQS
Trigger: CGATTGCACATTAGGGCTGCATAATCCTCTAACTCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGGAATTTCTTGTTTaGGACCTTGGAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGGEFLV*DLGEES
Trigger: AGATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGAGATGGCAGTTCGCATaGACTCGGCGCCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LNGSVGYTVLTCLSILRERWQFA*TRRPAS
Trigger: CGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCT...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCTGGTCCAGAGGGTTaGCAATACCGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPGPEG*QYRHPQ
Trigger: CTGAGGATGACGGTATTGCCAACCCTCTGGACCAGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGCTTGGCTCACGTGTaGGGAGGACTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSLAHV*GGLMVG
Trigger: CCCAACCATGAGTCCTCCCCACACGTGAGCCAAGCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTTGGCAACAGAGCTTaGCTCACGTGTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLGNRA*LTCGED
Trigger: GTCCTCCCCACACGTGAGCCAAGCTCTGTTGCCAAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTTCTTCTTGCCCATTaGCCTCTGGCGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFLLAH*PLACQG
Trigger: GCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGATCTGGAGTTCCAGGTaGCAGGTCATTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRIWSSR*QVIFFL
Trigger: CAAGAAGAAAATGACCTGCCACCTGGAACTCCAGAT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTCCTAAAGGGCTGGTaGCTCCAAGCCCACCATTCA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLLKGW*LQAHHS
Trigger: TGAATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGGAACTCCTAAAGGGCTaGTGGCTCCAAGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALELLKG*WLQAHH
Trigger: ATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAGTTC...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGAACTCCTAAAGGGCTaGTGGCTCCAAGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCELLKG*WLQAHH
Trigger: ATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAGTTC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCGCTGATGCAAAGGGATaGGGCCAGGAAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFADAKG*GQENFL
Trigger: AAGAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGC...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAACTCCGGCTTTGTTaGGGACTATGTTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGKLRLC*GLCFHE
Trigger: CTCATGAAAACATAGTCCCCAACAAAGCCGGAGTTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTGAGTACAGACATGTaGTCCTTGTATGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLSTDM*SLYGLM
Trigger: CATCAACCCATACAAGGACCACATGTCTGTACTCAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTGGGAGGGTTACTGTTaGGAGCTAACGGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALWEGYC*ELTAWS
Trigger: GCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGGAGGGTTACTGTTaGGAGCTAACGGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWEGYC*ELTAWS
Trigger: GCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGATAAAGAGTCTTTTGTaGGAGGGTTACTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGIKSLL*EGYCWE
Trigger: CTCCCAACAGTAACCCTCCCACAAAAGACTCTTTAT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTCCTTCATTTCTTCTaGACCATCTACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFLHFF*TIYRGL
Trigger: CAAGCCTCTGTAGATGGTCCAGAAGAAATGAAGGAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCATCCTGAAAACTCGGTaGAGGTTGGGAAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFILKTR*RLGRCC
Trigger: ACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGAT...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGAGAAACTGTCAAAACTTaGAGAAGGGGGACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRETVKT*RRGTSE
Trigger: CTCCGAGGTCCCCCTTCTCCAAGTTTTGACAGTTTC...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTCAGGAAACACAAACCTaGGGACGGACTGACGTGTTA +
Preference number: 4 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSQETQT*GRTDVL
Trigger: TAACACGTCAGTCCGTCCCCAGGTTTGTGTTTCCTG...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAAGGCGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLERRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGCCT...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS-3UTR CCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAACACCAGCAGCCTACTaGCTCTGCTACGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLETPAAY*LCYEGK
Trigger: CTTTCCTTCGTAGCAGAGCCAGTAGGCTGCTGGTGT...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTGAATGCGGGAATGAATaGTACAGTGGACACCCCAGC +
Preference number: 4 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSECGNE*YSGHPS
Trigger: GCTGGGGTGTCCACTGTACCATTCATTCCCGCATTC...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCACATCTCTTGGTTGTaGAGGGGAATTTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGHISWL*RGISCL
Trigger: CAAACAAGAAATTCCCCTCCACAACCAAGAGATGTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TCACTGTTTTGCTATCTTAGGTCCACCTCTTTCTCACAATGCATCCTCATACATCCAAAGGATCCTGAGTaGCTGGGACTACAGACGTGC +
Preference number: 4 (lower is better)
Translates to: SLFCYLRSTSFSQCILIHPKDPE*LGLQTC
Trigger: GCACGTCTGTAGTCCCAGCCACTCAGGATCCTTTGG...ATGTATGAGGATGCATTGTGAGAAAGAGGTGGACCTAAGATAGCAAAACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR CAA 72 bp CAATCAAAAAGGTGTCTGACTTGGCCATTCAGACAATaGCCCCCTTGTGGGAATGCGGGAATGAATGGTACA +
Preference number: 4 (lower is better)
Translates to: QSKRCLTWPFRQ*PPCGNAGMNGT
Trigger: TGTACCATTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCAAGTCAGACACCTTTTTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
3UTR CAA 72 bp AAGACCGACAGGCGGAATATTAGGAGAAGTAACTCCTaGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTG +
Preference number: 4 (lower is better)
Translates to: KTDRRNIRRSNS*FLRLRAWILHV
Trigger: CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAATATTCCGCCTGTCGGTCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTAGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATA +
Preference number: 4 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLGGHPP*SAASLI
Trigger: TATCAATGAAGCAGCCGATCATGGCGGATGGCCCCC...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCATCCTCAGCAATATaGAGCTTGTCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSSSAI*SLSSSS
Trigger: AGATGAGGAAGACAAGCTTCATATTGCTGAGGATGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCGATGCTGACTGCATaGCCATCGCGTTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSMLTA*PSRSSS
Trigger: ACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGTACTCCTCGATGCTaGCTGCATGACCATCGCGTT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGTPRC*LHDHRV
Trigger: AACGCGATGGTCATGCAGTCAGCATCGAGGAGTACC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGATGTGCTCCTTCAGTaGTGTCAAGCGCTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCDVLLQ*CQALVA
Trigger: GGCTACAAGCGCTTGACATCACTGAAGGAGCACATC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCTCGTGGCGGTACTTaGTGTGCTCCTTCAGTGATG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSRGGT*CAPSVM
Trigger: CATCACTGAAGGAGCACATCAAGTACCGCCACGAGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGAGGGACTATGTTTTCATaGGGCTGCAGGACCGCCTTG +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGGTMFS*GCRTAL
Trigger: CAAGGCGGTCCTGCAGCCTCATGAAAACATAGTCCC...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTCAGAAAGTACAGATaGCAAGAGGAGGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLRKYR*QEEGFI
Trigger: AATAAAGCCCTCCTCTTGTCATCTGTACTTTCTGAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTCTGCTATAGATGGTaGTGTTATGGAGTCCATAGG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFCYRW*CYGVHR
Trigger: CCTATGGACTCCATAACATCACCATCTATAGCAGAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGCTGTTTGGAGTGTATaGACTACTGTGGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRAVWSV*TTVGVF
Trigger: AAAAACTCCCACAGTAGTTCATACACTCCAAACAGC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGAGCGTGAGCATCATGTaGAAACGTGATCGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLSVSIM*KRDRQV
Trigger: AACTTGGCGATCACGTTTTCACATGATGCTCACGCT...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465070.5
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGAGACGAGAGACCCTaGAACACGCGCCACCTATCT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRDERP*NTRHLS
Trigger: AGATAGGTGGCGCGTGTTTCAGGGTCTCTCGTCTCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR TCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCCCGAGTGCTCATTTCTaGCTCCAAGGCGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGPSAHF*LQGVFP
Trigger: AGGAAAAACGCCTTGGAGTCAGAAATGAGCACTCGG...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS-3UTR TCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTAGATTTTTCAGAGGCTaGTGCTGGAAGGTGGCGGGA +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGRFFRG*CWKVAG
Trigger: TCCCGCCACCTTCCAGCATCAGCCTCTGAAAAATCT...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 4 (lower is better)
Translates to: SLLALLRRKACFYPNWLSSSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAACCTGTTCTTTGCCACTaGAGTTCAGAGACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEPVLCH*SSETKG
Trigger: GCCTTTGGTCTCTGAACTTCAGTGGCAAAGAACAGG...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTCCTGCCCCAGTGCTTTaGAAGTCAGCAAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGPAPVL*KSAKQA
Trigger: AGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGG...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTTGTGTGTGTGCAGCGTaGCAAAACTTGCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSCVCAA*QNLQKI
Trigger: GATCTTCTGCAAGTTTTGTCACGCTGCACACACACA...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACTTGGAAGAATGCAGATaGCAAAAACTGTTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYLEECR*QKLLQG
Trigger: TCCTTGCAACAGTTTTTGTCATCTGCATTCTTCCAA...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTACAATCAATTGTCTGTaGGCATTGCAAACCTGCACT +
Preference number: 4 (lower is better)
Translates to: SLLALLRRKACFYPNWLSTINCL*ALQTCT
Trigger: AGTGCAGGTTTGCAATGCTCACAGACAATTGATTGT...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATGTGGGAATGCGGGAATaGATGGTACAGTGGACACCC +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYVGMRE*MVQWTP
Trigger: GGGTGTCCACTGTACCATTCATTCCCGCATTCCCAC...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACAATCAAAAAGGTGTCTaGCTTGGCCATTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: ISETGATSPSLIASNHHYNQKGV*LGHSDN
Trigger: ATTGTCTGAATGGCCAAGTCAGACACCTTTTTGATT...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCATTTATCTCTTTGCTCTaGAAAGACAACCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IAPSLVCVQRDKTCRRSPFISLL*KDNQRA
Trigger: TGCTCTTTGGTTGTCTTTTCAGAGCAAAGAGATAAA...TGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGGGGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGTTTATCTCTTTGCTCTaGAAAGACAACCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKFISLL*KDNQRA
Trigger: TGCTCTTTGGTTGTCTTTTCAGAGCAAAGAGATAAA...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGTTCCAAGTGGTAAGCTaGTGCTGTTGGCATAAACAG +
Preference number: 4 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMFQVVS*CCWHKQ
Trigger: CTGTTTATGCCAACAGCATCAGCTTACCACTTGGAA...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGTTCCATGGAGCCTACTaGTTATTATCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKFHGAY*LLSFSF
Trigger: AAAGGAAAACGATAATAATCAGTAGGCTCCATGGAA...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCGGTGCCATTTCTCTaGCTAATTCCACATTTCAGA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSVPFL*LIPHFR
Trigger: TCTGAAATGTGGAATTAGTCAGAGAAATGGCACCGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAATCCGCCATGATCGGCTaGTTCATTGATAAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLESAMIG*FIDKSG
Trigger: TCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGA...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTCCTCGATGCTGACTaGATGACCATCGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLLDAD*MTIAFL
Trigger: GAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCGCCTTCTTTCTCGTaGTCCTTCTCGCTCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSPSFS*SFSLSP
Trigger: TGGCGAGAGCGAGAAGGAGCACGAGAAAGAAGGCGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTATCTCCCGCTCCGAGTaGTCATTTCTGACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGISRSE*SFLTPR
Trigger: CCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGAT...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGAGTTAGAGGATTATaGAGCCCTAATGTGCAATCG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRVRGL*SPNVQS
Trigger: CGATTGCACATTAGGGCTGCATAATCCTCTAACTCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGGGAATTTCTTGTTTaGGACCTTGGAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGEFLV*DLGEES
Trigger: AGATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGTTTTGTTTAGCTCTTaGGGAGAAATTCTGATACGC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGVLFSS*GEILIR
Trigger: GCGTATCAGAATTTCTCCGCAAGAGCTAAACAAAAC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCTCAGTCCCAGCAATaGTCAGTAGCTTTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPQSQQ*SVAFLK
Trigger: TTTAAGAAAAGCTACTGAGCATTGCTGGGACTGAGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAATTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCTGGTCCAGAGGGTTaGCAATACCGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPGPEG*QYRHPQ
Trigger: CTGAGGATGACGGTATTGCCAACCCTCTGGACCAGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLDRGF*PHSVIV
Trigger: GACTATGACACTATGGGGCCAGAAGCCACGATCCAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTGTTAATTGCGGTCTaGATCGTGGCTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLLIAV*IVASGP
Trigger: GGGGCCAGAAGCCACGATCCAGACCGCAATTAACAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTTCTTCTTGCCCATTaGCCTCTGGCGTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFLLAH*PLACQG
Trigger: GCCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTGGGCAAAAGCATCTaGAGTTCCAGGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLGKSI*SSRWQV
Trigger: GACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGCAAAAGCATCTaGAGTTCCAGGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALLGKSI*SSRWQV
Trigger: GACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGTCTTCATTCTTCTCGTaGCGGTACTTGATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVSSFFS*RYLMCS
Trigger: GGAGCACATCAAGTACCGCCACGAGAAGAATGAAGA...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp GCTGCATTGGACTCTGAGCAGATGGATGAACTCCTAAAGGGCTGGTGGCTCCAATTCAGACATACTAAGTaGTTTTCCATTCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: AALDSEQMDELLKGWWLQFRHTK*FSILQL
Trigger: AAGTTGGAGAATGGAAAACCACTTAGTATGTCTGAA...TTGGAGCCACCAGCCCTTTAGGAGTTCATCCATCTGCTCAGAGTCCAATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTCCTAAAGGGCTGGTaGCTCCAAGCCCACCATTCA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLLKGW*LQAHHS
Trigger: TGAATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGAACTCCTAAAGGGCTaGTGGCTCCAAGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVELLKG*WLQAHH
Trigger: ATGGTGGGCTTGGAGCCACCAGCCCTTTAGGAGTTC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAATTACTATTCATGGTaGGAAACCCAAGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGNYYSW*ETQVKG
Trigger: CCCCTTTACTTGGGTTTCCCACCATGAATAGTAATT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTGAGTACAGACATGTaGTCCTTGTATGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLSTDM*SLYGLM
Trigger: CATCAACCCATACAAGGACCACATGTCTGTACTCAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGGAGCTAACGGCTTaGAGCTTCTTTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWELTA*SFFPGM
Trigger: CATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTGGGAGCTAACGGCTTaGAGCTTCTTTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALWELTA*SFFPGM
Trigger: CATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGGAGGGTTACTGTTaGGAGCTAACGGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWEGYC*ELTAWS
Trigger: GCTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFVTLL*SSAIDG
Trigger: ACCATCTATAGCAGAACTCCACAACAGTGTTACGAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTCCTTGGGTTAGCATTTGGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATTTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGT +
Preference number: 4 (lower is better)
Translates to: LLGLAFGADLSLACVSPYFVTLL*SSAIDG
Trigger: ACCATCTATAGCAGAACTCCACAACAGTGTTACGAA...ATATGGTGACACACAAGCCAGGGACAGATCAGCACCAAATGCTAACCCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGTATTACTCCTGGAGTaGTCCAATTTTTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGVLLLE*SNFSTG
Trigger: ACCAGTTGAAAAATTGGACCACTCCAGGAGTAATAC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTAAGGAGTATTACTCCTaGAGTGGTCCAATTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GFWVNNGCVTALKVLLDAKEYYS*SGPIFQ
Trigger: TTGAAAAATTGGACCACTCCAGGAGTAATACTCCTT...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTCCTTCATTTCTTCTaGACCATCTACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFLHFF*TIYRGL
Trigger: CAAGCCTCTGTAGATGGTCCAGAAGAAATGAAGGAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTAGGCGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGRRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGCCT...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS-3UTR CCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCACACCAGCAGCCTACTaGCTCTGCTACGAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TETYDIAVEQGTLILVLPTPAAY*LCYEGK
Trigger: CTTTCCTTCGTAGCAGAGCCAGTAGGCTGCTGGTGT...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTCTGGGAAAGGATCTaGGATAGATTATACCTTGAA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLWERI*DRLYLE
Trigger: TTCAAGGTATAATCTATCCCAGATCCTTTCCCAGAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR CCA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTTGCGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPLRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGCAA...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCACATCTCTTGGTTGTaGAGGGGAATTTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRHISWL*RGISCL
Trigger: CAAACAAGAAATTCCCCTCCACAACCAAGAGATGTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAAATGCACATCTCTTaGTTGTGGAGGGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGKMHIS*LWRGIS
Trigger: AGAAATTCCCCTCCACAACCAAGAGATGTGCATTTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCTACAGCCCCTGAATaGCCTCACACATCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPTAPE*PHTSWS
Trigger: GCTCCAAGATGTGTGAGGCCATTCAGGGGCTGTAGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGTTTATTACAATGTGTaGGGCTCCAGATATACACAC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGVYYNV*GSRYTH
Trigger: GTGTGTATATCTGGAGCCCCACACATTGTAATAAAC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 72 bp TTAGGTTGCACATTCATTGTTTGTTGGTCCTATCTCTaGTGGATTGGGACACAGATATGCCCCATGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LGCTFIVCWSYL*WIGTQICPMGN
Trigger: GTTGCCCATGGGGCATATCTGTGTCCCAATCCACAAGAGATAGGACCAACAAACAATGAATGTGCAACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 72 bp GCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTaGAGTACTGGTAGACTTTTCGTTGTTCAAACCATT +
Preference number: 4 (lower is better)
Translates to: AWSFFPGMGTWN*STGRLFVVQTI
Trigger: AATGGTTTGAACAACGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGATGTGCTCCTTCAGTaGTGTCAAGCGCTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVDVLLQ*CQALVA
Trigger: GGCTACAAGCGCTTGACATCACTGAAGGAGCACATC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCTCGTGGCGGTACTTaGTGTGCTCCTTCAGTGATG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSRGGT*CAPSVM
Trigger: CATCACTGAAGGAGCACATCAAGTACCGCCACGAGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGAGATGGTGTTTATATTTaGAGGCCTTGCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRDGVYI*RPCHTL
Trigger: CAGAGTGTGGCAAGGCCTTCAAATATAAACACCATC...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCTTGTTCCTCAGGTTaGGAGCATGGATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPCSSG*EHGSFM
Trigger: CATGAAGGATCCATGCTCTCAACCTGAGGAACAAGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTAGTGGCACCATTATaGCTCACTACCGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLVAPL*LTTGRP
Trigger: CGGTCTTCCGGTAGTGAGTCATAATGGTGCCACTAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAGCTTTGGCTTCATTaGCTTTTTCCAACGTATAGT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGKLWLH*LFPTYS
Trigger: ACTATACGTTGGAAAAAGTCAATGAAGCCAAAGCTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTTACAGAACTGGCATaGAAATGGAGTGGATATGTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFTELA*KWSGYV
Trigger: AACATATCCACTCCATTTTCATGCCAGTTCTGTAAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTTTTACAGAACTGGCATaGAAATGGAGTGGATATGTT +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIFTELA*KWSGYV
Trigger: AACATATCCACTCCATTTTCATGCCAGTTCTGTAAA...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGCTGCAGGACCGCCTTaGTCTCTTCATTCATCTTAC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCAAGPP*SLHSSY
Trigger: GTAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGGGTCCTTGTATGGGTTaGTGGGGCTTGTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALGPCMG*WGLSFL
Trigger: AAGGAATGACAAGCCCCATCAACCCATACAAGGACC...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSFTNS*GRPTAM
Trigger: CATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTTCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: KRRALLSTKTPALLGTMFSFTNS*GRPTAM
Trigger: CATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGA...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCATGAGTCATAACTCCTaGCCGTATGAGGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGMSHNS*PYEGMH
Trigger: GTGCATTCCCTCATACGGTCAGGAGTTATGACTCAT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000462355.2
ENST00000470879.5
CDS-3UTR TCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTAAACCTGGGGACGGACTaGCGTGTTACGCCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: NTETYDIAVEQGTLILVLNLGTD*RVTPLL
Trigger: TAGAAGAGGCGTAACACGTCAGTCCGTCCCCAGGTT...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR TCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCCGAGTGCTCATTTCTaGCTCCAAGGCGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TETYDIAVEQGTLILVLPPSAHF*LQGVFP
Trigger: AGGAAAAACGCCTTGGAGTCAGAAATGAGCACTCGG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS-3UTR TCA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTTCATTTAAGCATCTCTaGAACGGGAGCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSSFKHL*NGSNFS
Trigger: GGAGAAGTTGCTCCCGTTTCAGAGATGCTTAAATGA...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCACTCCCTCTCTCTGTaGCAGGCACAAAATAGTGTC +
Preference number: 4 (lower is better)
Translates to: TETYDIAVEQGTLILVLPHSLSL*QAQNSV
Trigger: GACACTATTTTGTGCCTGTCACAGAGAGAGGGAGTG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGACAATCAATTGTCTGTaGGCATTGCAAACCTGCACT +
Preference number: 4 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMTINCL*ALQTCT
Trigger: AGTGCAGGTTTGCAATGCTCACAGACAATTGATTGT...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCACAAGTGTTATCCTaGTATTTTCAGACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSQVLS*YFQTQV
Trigger: TACCTGAGTCTGAAAATATCAGGATAACACTTGTGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTGAGCATGTTTATTTaGATAATTGCCCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLSMFI*IIAPLH
Trigger: GTGCAATGGGGCAATTATTCAAATAAACATGCTCAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCAGATGAGTCACCTGTaGTTTTTCTTAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGQMSHL*FFLMSS
Trigger: TGAAGACATTAAGAAAAATCACAGGTGACTCATCTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGAAGGTGGCTGTTTCTaGATTAGTCAGCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCEGGCF*ISQPSQ
Trigger: CTGTGAGGGCTGACTAATTCAGAAACAGCCACCTTC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRISLL*QGCSTP
Trigger: TGGAGTGGAACACCCCTGGCACAACAACGAGATTCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCTCAAAATCTGATGTaGAATTTGCATTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGPQNLM*NLHSSL
Trigger: CAGTGAAGAATGCAAATTGCACATCAGATTTTGAGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGGTCATTTTCTTCTTaGCCATTGGCCTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRSFSS*PLASGV
Trigger: CACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGAGGTCATTTTCTTCTTaGCCATTGGCCTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALRSFSS*PLASGV
Trigger: CACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCT...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAATCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKSGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAAAGGGATAACCATTTCTaGTCTTCTGATTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKRDNHF*SSDCFS
Trigger: GGAGAAACAATCAGAAGAGCAGAAATGGTTATCCCT...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACACAACCTGCCCCAGTaGTTTGAAAGTCAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NCCKEKNLPHLRINAALLHNLPQ*FESQQN
Trigger: GTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTCCAGCCTTGTGTGTGTaGAGCGTGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGPALCV*SVTKLA
Trigger: TGCAAGTTTTGTCACGCTGCACACACACAAGGCTGG...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATGCCCCCTTGTGGGAATaGGGGAATGAATGGTACAGT +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYAPLWE*GNEWYS
Trigger: ACTGTACCATTCATTCCCGCATTCCCACAAGGGGGC...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTAGGCCATTCAGACAATTaGCCCCTTGTGGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: NTETYDIAVEQGTLILVLGHSDN*PLVGMR
Trigger: CCGCATTCCCACAAGGGGGCAATTGTCTGAATGGCC...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTACCACAGCCACTCTTTaGCATCCTTTCCTCTGTACA +
Preference number: 4 (lower is better)
Translates to: LRRQPSFRHGTWVMFFFLTTATL*HPFLCT
Trigger: TGTACAGAGGAAAGGATGGCAAAGAGTGGCTGTGGT...AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR GCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTGATGTTACTAAAATaGACATCTCTTGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLMLLK*TSLGCG
Trigger: TCCACAACCAAGAGATGTGCATTTTAGTAACATCAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCACGTTTTTCCTCCTaGGATTGGCTTGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPRFSS*DWLVCA
Trigger: GGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLDRGF*PHSVIV
Trigger: GACTATGACACTATGGGGCCAGAAGCCACGATCCAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTGTTAATTGCGGTCTaGATCGTGGCTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLLIAV*IVASGP
Trigger: GGGGCCAGAAGCCACGATCCAGACCGCAATTAACAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLLRGF*VNNGCV
Trigger: GACACAGCCATTATTTACCCAGAAGCCCCTGAGGAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTGGGCAAAAGCATCTaGAGTTCCAGGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLGKSI*SSRWQV
Trigger: GACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGCAGGTCAGCAGTTaGGCAAAAGCATCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGQVSS*AKASGV
Trigger: AACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTGCTGATCTGTCCCTaGCTTGTGTGTCACCATATG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVLICP*LVCHHM
Trigger: CATATGGTGACACACAAGCCAGGGACAGATCAGCAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAATTACTATTCATGGTaGGAAACCCAAGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRNYYSW*ETQVKG
Trigger: CCCCTTTACTTGGGTTTCCCACCATGAATAGTAATT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTTTCTTTACAGAACTaGCATGAAAATGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGLSLQN*HENGVD
Trigger: ATCCACTCCATTTTCATGCCAGTTCTGTAAAGAAAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTCTTTCTTTACAGAACTaGCATGAAAATGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: MVGNPSKGASIPTPKCCILSLQN*HENGVD
Trigger: ATCCACTCCATTTTCATGCCAGTTCTGTAAAGAAAG...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCAAACTCCGGCTTTGTTaGGGACTATGTTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFKLRLC*GLCFHE
Trigger: CTCATGAAAACATAGTCCCCAACAAAGCCGGAGTTT...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCAGGGATGGGGACCTaGAATTTGAGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPGMGT*NLSTGR
Trigger: TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGGAGCTAACGGCTTaGAGCTTCTTTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWELTA*SFFPGM
Trigger: CATCCCTGGAAAGAAGCTCCAAGCCGTTAGCTCCCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFVTLL*SSAIDG
Trigger: ACCATCTATAGCAGAACTCCACAACAGTGTTACGAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTATTACTCCTGGAGTaGTCCAATTTTTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVLLLE*SNFSTG
Trigger: ACCAGTTGAAAAATTGGACCACTCCAGGAGTAATAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAGGAGTATTACTCCTaGAGTGGTCCAATTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGKEYYS*SGPIFQ
Trigger: TTGAAAAATTGGACCACTCCAGGAGTAATACTCCTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGTGTATGAACTACTGTaGGAGTTTTTAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGVYELL*EFLEDV
Trigger: CACATCTTCTAAAAACTCCCACAGTAGTTCATACAC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCTAAAGGCTCAGCCTaGAGCTCCTCAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSKGSA*SSSEEK
Trigger: CTTCTCTTCTGAGGAGCTCCAGGCTGAGCCTTTAGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCAGGAAACACAAACCTaGGGACGGACTGACGTGTTA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCQETQT*GRTDVL
Trigger: TAACACGTCAGTCCGTCCCCAGGTTTGTGTTTCCTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR CCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACTTCCTGACTCAGCCTaGATAACGGGCTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: NTETYDIAVEQGTLILVLLPDSA*ITGSSR
Trigger: TCTGGAGGAGCCCGTTATCCAGGCTGAGTCAGGAAG...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAAACTCCTCAGATATaGGACATTGTAGTGATTGTC +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGKTPQI*DIVVIV
Trigger: GACAATCACTACAATGTCCCATATCTGAGGAGTTTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCTTGTTTGCGACCTTaGAGAAGAATCTTAAGACAA +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGSCLRP*RRILRQ
Trigger: TTGTCTTAAGATTCTTCTCCAAGGTCGCAAACAAGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAAAATGCACATCTCTTaGTTGTGGAGGGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRKMHIS*LWRGIS
Trigger: AGAAATTCCCCTCCACAACCAAGAGATGTGCATTTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTTTATTACAATGTGTaGGGCTCCAGATATACACAC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVYYNV*GSRYTH
Trigger: GTGTGTATATCTGGAGCCCCACACATTGTAATAAAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 72 bp GTTAGCCTGAGAGGAGGATCACAATTCGTAACACTGTaGTGGAGTTCTGCTATAGATGGTGATGTTATGGAG +
Preference number: 4 (lower is better)
Translates to: VSLRGGSQFVTL*WSSAIDGDVME
Trigger: CTCCATAACATCACCATCTATAGCAGAACTCCACAACAGTGTTACGAATTGTGATCCTCCTCTCAGGCTAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCACACTCTGTGCATTTaGACTTGCGATTACCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCHTLCI*TCDYLL
Trigger: GAGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGAAGAACCCGTCTTaGTATTGTTTCTCATTCGGC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGKNPS*YCFSFG
Trigger: GCCGAATGAGAAACAATATCAAGACGGGTTCTTCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCTTGTTCCTCAGGTTaGGAGCATGGATCCTTCATG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPCSSG*EHGSFM
Trigger: CATGAAGGATCCATGCTCTCAACCTGAGGAACAAGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTAGTGGCACCATTATaGCTCACTACCGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLVAPL*LTTGRP
Trigger: CGGTCTTCCGGTAGTGAGTCATAATGGTGCCACTAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAAGCTTTGGCTTCATTaGCTTTTTCCAACGTATAGT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRKLWLH*LFPTYS
Trigger: ACTATACGTTGGAAAAAGTCAATGAAGCCAAAGCTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTACTGATCTGTCTCCTTaGGTCAGTAGTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCTDLSP*VSSQAL
Trigger: CAGAGCTTGACTACTGACTCAAGGAGACAGATCAGT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTACTGATCTGTCTCCTTaGGTCAGTAGTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KRRALLSTKTPALLGTMFTDLSP*VSSQAL
Trigger: CAGAGCTTGACTACTGACTCAAGGAGACAGATCAGT...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTTACAGAACTGGCATaGAAATGGAGTGGATATGTT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFTELA*KWSGYV
Trigger: AACATATCCACTCCATTTTCATGCCAGTTCTGTAAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGCTGCAGGACCGCCTTaGTCTCTTCATTCATCTTAC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVAAGPP*SLHSSY
Trigger: GTAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGTCCTTGTATGGGTTaGTGGGGCTTGTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGPCMG*WGLSFL
Trigger: AAGGAATGACAAGCCCCATCAACCCATACAAGGACC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCCTTCACAAATTCCTaGGGAAGGCCCACAGCAATG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSFTNS*GRPTAM
Trigger: CATTGCTGTGGGCCTTCCTCAGGAATTTGTGAAGGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGGGACCTGGAATTTaGGTACTGGTAGACTTTTCG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWGPGI*VLVDFS
Trigger: CGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGAGCTGTTTGGAGTGTATaGACTACTGTGGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRAVWSV*TTVGVF
Trigger: AAAAACTCCCACAGTAGTTCATACACTCCAAACAGC...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCATCGATATCTTCAAAATaGGTCATAACTCCTGACCGT +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSSISSK*VITPDR
Trigger: ACGGTCAGGAGTTATGACTCATTTTGAAGATATCGA...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470879.5
CDS-3UTR TCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAACGTGCATGTCTCTGTaGGATTTTTCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLETCMSL*DFSEAD
Trigger: ATCAGCCTCTGAAAAATCTCACAGAGACATGCACGT...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTGTGTGTGTGCAGCGTaGCAAAACTTGCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: TETYDIAVEQGTLILVLPCVCAA*QNLQKI
Trigger: GATCTTCTGCAAGTTTTGTCACGCTGCACACACACA...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCATTGGAAGAATGCAGATaGCAAAAACTGTTGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSLEECR*QKLLQG
Trigger: TCCTTGCAACAGTTTTTGTCATCTGCATTCTTCCAA...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCAACACCCCAGCACCATTaGCGTTATAAACATGTAAAT +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSTPQHH*RYKHVN
Trigger: ATTTACATGTTTATAACGTCAATGGTGCTGGGGTGT...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTTTTATCTCTTTGCTCTaGAAAGACAACCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLLALLRRKACFYPNWLSFISLL*KDNQRA
Trigger: TGCTCTTTGGTTGTCTTTTCAGAGCAAAGAGATAAA...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTGAGCATGTTTATTTaGATAATTGCCCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLSMFI*IIAPLH
Trigger: GTGCAATGGGGCAATTATTCAAATAAACATGCTCAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCAGATGAGTCACCTGTaGTTTTTCTTAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRQMSHL*FFLMSS
Trigger: TGAAGACATTAAGAAAAATCACAGGTGACTCATCTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRISLL*QGCSTP
Trigger: TGGAGTGGAACACCCCTGGCACAACAACGAGATTCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGAAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGRISLL*QGCSTP
Trigger: TGGAGTGGAACACCCCTGGCACAACAACGAGATTCT...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCTCAAAATCTGATGTaGAATTTGCATTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPQNLM*NLHSSL
Trigger: CAGTGAAGAATGCAAATTGCACATCAGATTTTGAGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGGTCATTTTCTTCTTaGCCATTGGCCTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRSFSS*PLASGV
Trigger: CACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGCGGTACTTGATGTaGTCCTTCAGTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWRYLM*SFSDVK
Trigger: CTTGACATCACTGAAGGAGCACATCAAGTACCGCCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGAGAAACGTTTCTTaGAGTTTGGGCACTCGTAAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGRNVS*SLGTRK
Trigger: CTTACGAGTGCCCAAACTGCAAGAAACGTTTCTCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGGGGAGAAACGTTTCTTaGAGTTTGGGCACTCGTAAG +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALGRNVS*SLGTRK
Trigger: CTTACGAGTGCCCAAACTGCAAGAAACGTTTCTCCC...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATGCAGCCTACTGGCTCTaGTACGAAGGAAAGCATGTT +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYAAYWL*YEGKHV
Trigger: AACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCTGC...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTGATGTTACTAAAATaGACATCTCTTGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLMLLK*TSLGCG
Trigger: TCCACAACCAAGAGATGTGCATTTTAGTAACATCAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CCTTACAGACAATTAGCTGACCTGTTGAATCCTCCACAGGGGACAATACCACAGACCTCTTTCTCACAATaGATCCTCATACATCATACT +
Preference number: 4 (lower is better)
Translates to: PYRQLADLLNPPQGTIPQTSFSQ*ILIHHT
Trigger: AGTATGATGTATGAGGATGCATTGTGAGAAAGAGGT...CTGTGGTATTGTCCCCTGTGGAGGATTCAACAGGTCAGCTAATTGTCTGTAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR CCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGATTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGFSSWD*LVCASC
Trigger: GCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAA...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTCCTCAGGGGCTTCTaGGTAAATAATGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLLRGF*VNNGCV
Trigger: GACACAGCCATTATTTACCCAGAAGCCCCTGAGGAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCTTCATTCTTCTCGTaGCGGTACTTGATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSSFFS*RYLMCS
Trigger: GGAGCACATCAAGTACCGCCACGAGAAGAATGAAGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTGCTGATCTGTCCCTaGCTTGTGTGTCACCATATG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVLICP*LVCHHM
Trigger: CATATGGTGACACACAAGCCAGGGACAGATCAGCAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTCAGACATACTAAGTaGTTTTCCATTCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: RYAPWATETYIALKEATGFRHTK*FSILQL
Trigger: AAGTTGGAGAATGGAAAACCACTTAGTATGTCTGAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTTCAGTAGTCAAGCTCTaGAGGCAAGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KRRALLSTKTPALLGTMFSVVKL*RQALAS
Trigger: TGAAGCCAAAGCTTGCCTCCAGAGCTTGACTACTGA...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCAGTAGTCAAGCTCTaGAGGCAAGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSVVKL*RQALAS
Trigger: TGAAGCCAAAGCTTGCCTCCAGAGCTTGACTACTGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTTTCTTTACAGAACTaGCATGAAAATGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLSLQN*HENGVD
Trigger: ATCCACTCCATTTTCATGCCAGTTCTGTAAAGAAAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGCTGATGCAAAGGGATaGGGCCAGGAAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCADAKG*GQENFL
Trigger: AAGAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCATGTGGTCCTTGTATaGGTTGATGGGGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCHVVLV*VDGACH
Trigger: ATGACAAGCCCCATCAACCCATACAAGGACCACATG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGCATGTGGTCCTTGTATaGGTTGATGGGGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALHVVLV*VDGACH
Trigger: ATGACAAGCCCCATCAACCCATACAAGGACCACATG...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCAGGGATGGGGACCTaGAATTTGAGTACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPGMGT*NLSTGR
Trigger: TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAAGGAGTATTACTCCTaGAGTGGTCCAATTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRKEYYS*SGPIFQ
Trigger: TTGAAAAATTGGACCACTCCAGGAGTAATACTCCTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTGTATGAACTACTGTaGGAGTTTTTAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVYELL*EFLEDV
Trigger: CACATCTTCTAAAAACTCCCACAGTAGTTCATACAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCTAAAGGCTCAGCCTaGAGCTCCTCAGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSKGSA*SSSEEK
Trigger: CTTCTCTTCTGAGGAGCTCCAGGCTGAGCCTTTAGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTAAGAAGCCGCGAAGTGTaGGGGAGAAAAAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NTETYDIAVEQGTLILVLRSREV*GRKRWK
Trigger: CTTCCACCTTTTTCTCCCCCACACTTCGCGGCTTCT...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCGCCACCTATCTTTGTaGGGAGGGATAATTGAAGCG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRHLSL*GGIIEA
Trigger: CGCTTCAATTATCCCTCCCCACAAAGATAGGTGGCG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR CCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTAGAATGCGGGAATGAATaGTACAGTGGACACCCCAGC +
Preference number: 4 (lower is better)
Translates to: NTETYDIAVEQGTLILVLECGNE*YSGHPS
Trigger: GCTGGGGTGTCCACTGTACCATTCATTCCCGCATTC...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAAAAAGGTGTCTGACTTaGCCATTCAGACAATTGCCC +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEKRCLT*PFRQLP
Trigger: GGGCAATTGTCTGAATGGCCAAGTCAGACACCTTTT...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCTTGTTTGCGACCTTaGAGAAGAATCTTAAGACAA +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSCLRP*RRILRQ
Trigger: TTGTCTTAAGATTCTTCTCCAAGGTCGCAAACAAGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGCTCTTGGAGAAAATaGGCAGGGGTGTTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGSWRK*AGVFSC
Trigger: ACAACTGAACACCCCTGCCCATTTTCTCCAAGAGCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGATGGTGTTTATATTTaGAGGCCTTGCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCDGVYI*RPCHTL
Trigger: CAGAGTGTGGCAAGGCCTTCAAATATAAACACCATC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGAAGAACCCGTCTTaGTATTGTTTCTCATTCGGC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGKNPS*YCFSFG
Trigger: GCCGAATGAGAAACAATATCAAGACGGGTTCTTCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCACTGATCTGTCTCCTTaGGTCAGTAGTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVTDLSP*VSSQAL
Trigger: CAGAGCTTGACTACTGACTCAAGGAGACAGATCAGT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGGGACCTGGAATTTaGGTACTGGTAGACTTTTCG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWGPGI*VLVDFS
Trigger: CGAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAGGTTTTGTTAGCCTaGGAGGAGGATCACAATTCG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKVLLA*EEDHNS
Trigger: CGAATTGTGATCCTCCTCTCAGGCTAACAAAACCTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCAAGCAATTCTCCCTaGAATCCTTGTTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSSNSP*NPCFRW
Trigger: CCAGCGGAAACAAGGATTTCAGGGAGAATTGCTTGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATATGAGTCATAACTCCTaGCCGTATGAGGGAATGCAC +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYMSHNS*PYEGMH
Trigger: GTGCATTCCCTCATACGGTCAGGAGTTATGACTCAT...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470879.5
CDS-3UTR TCA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTACGTGCATGTCTCTGTaGGATTTTTCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGTCMSL*DFSEAD
Trigger: ATCAGCCTCTGAAAAATCTCACAGAGACATGCACGT...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATACGTGCATGTCTCTGTaGGATTTTTCAGAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYTCMSL*DFSEAD
Trigger: ATCAGCCTCTGAAAAATCTCACAGAGACATGCACGT...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGSSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAAAGCAGTTTCCGGATTTaGTTTTTGCTACAACGTGCA +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLESSFRI*FLLQRA
Trigger: TGCACGTTGTAGCAAAAATCAAATCCGGAAACTGCT...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGACACCCCAGCACCATTaGCGTTATAAACATGTAAAT +
Preference number: 4 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLTPQHH*RYKHVN
Trigger: ATTTACATGTTTATAACGTCAATGGTGCTGGGGTGT...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTATGTTTATCTCTTTGCTCTaGAAAGACAACCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VKFKILSPPLVLVDCHSMFISLL*KDNQRA
Trigger: TGCTCTTTGGTTGTCTTTTCAGAGCAAAGAGATAAA...CATAGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGGAAACTTCCTTGTCTAAGTGTGTATGACTCTCGTTGCCCCATCCCAACTTCATTCCATGGAGCCTACTaGTTATTATCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RKLPCLSVYDSRCPIPTSFHGAY*LLSFSF
Trigger: AAAGGAAAACGATAATAATCAGTAGGCTCCATGGAA...TGAAGTTGGGATGGGGCAACGAGAGTCATACACACTTAGACAAGGAAGTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTTGCGGAGAAATTCTaGTACGCATCTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLAEKF*YASLFP
Trigger: TGGGAAGAGAGATGCGTATCAGAATTTCTCCGCAAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCGATGCATATTTCAGTaGCTAAAAGCCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRCIFQ*LKAPSH
Trigger: ATGGGAAGGGGCTTTTAGTCACTGAAATATGCATCG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGTACCATTGTTAATTaGGGTCTGGATCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCCTIVN*GLDRGF
Trigger: GAAGCCACGATCCAGACCGCAATTAACAATGGTACA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGCGGTACTTGATGTaGTCCTTCAGTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWRYLM*SFSDVK
Trigger: CTTGACATCACTGAAGGAGCACATCAAGTACCGCCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGAGAAACGTTTCTTaGAGTTTGGGCACTCGTAAG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGRNVS*SLGTRK
Trigger: CTTACGAGTGCCCAAACTGCAAGAAACGTTTCTCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGKSNKL*KLQTGR
Trigger: GCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTAAAAGCAACAAACTTTaGAAGTTACAAACGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSKSNKL*KLQTGR
Trigger: GCGGCCCGTTTGTAACTTGCAAAGTTTGTTGCTTTT...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTACCAGCCTTGTGTGTGTaGAGCGTGACAAAACTTGCA +
Preference number: 4 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLPALCV*SVTKLA
Trigger: TGCAAGTTTTGTCACGCTGCACACACACAAGGCTGG...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTCAAATAATGAGGAGGTaGCTGGATGTTTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSQIMRR*LDVSRL
Trigger: AAGCCTTGAAACATCCAGGCACCTCCTCATTATTTG...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCCTCCTCTACTTCGTaGACACTTTCTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPSSTS*TLSSFQ
Trigger: TTGGAAAGAAGAAAGTGTGCACGAAGTAGAGGAGGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTATCTGGAGTTCCAGGTaGCAGGTCATTTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCIWSSR*QVIFFL
Trigger: CAAGAAGAAAATGACCTGCCACCTGGAACTCCAGAT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTCAGACATACTAAGTaGTTTTCCATTCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFRHTK*FSILQL
Trigger: AAGTTGGAGAATGGAAAACCACTTAGTATGTCTGAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCAGTAGTCAAGCTCTaGAGGCAAGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSVVKL*RQALAS
Trigger: TGAAGCCAAAGCTTGCCTCCAGAGCTTGACTACTGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGCTGATGCAAAGGGATaGGGCCAGGAAAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVADAKG*GQENFL
Trigger: AAGAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCATGTGGTCCTTGTATaGGTTGATGGGGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVHVVLV*VDGACH
Trigger: ATGACAAGCCCCATCAACCCATACAAGGACCACATG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AAAACAGGCTCCCTAGAAGCTCATCAACTTTACGAAGAAAGCTACTTGCCAAAGAGGCAAAGGCTTCCATaGAGCCTACTGATTATTATC +
Preference number: 4 (lower is better)
Translates to: KTGSLEAHQLYEESYLPKRQRLP*SLLIII
Trigger: GATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCT...CTTTGGCAAGTAGCTTTCTTCGTAAAGTTGATGAGCTTCTAGGGAGCCTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TCACTGTTTTGCTATCTTAGGTCCACCTCTTTCTCACAATGCATCCTCATACATGAGAGGAATACCAAATaGCACACTAATCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLFCYLRSTSFSQCILIHERNTK*HTNPSA
Trigger: GGCAGAAGGATTAGTGTGCCATTTGGTATTCCTCTC...ATGTATGAGGATGCATTGTGAGAAAGAGGTGGACCTAAGATAGCAAAACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
3UTR CAA 72 bp AACACATCTGATGTTACTAAAATGCACATCTCTTGGTaGTGGAGGGGAATTTCTTGTTTGCGACCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: NTSDVTKMHISW*WRGISCLRPWR
Trigger: TCTCCAAGGTCGCAAACAAGAAATTCCCCTCCACAACCAAGAGATGTGCATTTTAGTAACATCAGATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 72 bp CGGAATATTAGGAGAAGTAACTCCTTGTTCCTCAGGTaGAGAGCATGGATCCTTCATGTGATAACCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RNIRRSNSLFLR*RAWILHVITFQ
Trigger: TTGAAAGGTTATCACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAATATTCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCATCCTCAGCAATATaGAGCTTGTCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSSSAI*SLSSSS
Trigger: AGATGAGGAAGACAAGCTTCATATTGCTGAGGATGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTCATCCTCAGCAATATaGAGCTTGTCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALSSSAI*SLSSSS
Trigger: AGATGAGGAAGACAAGCTTCATATTGCTGAGGATGA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTACATTTCTTGCTGCTaGTGTGCGAACTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVYISCC*CANCRN
Trigger: GTTCCTACAGTTCGCACATCAGCAGCAAGAAATGTA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTCAGAAAGTACAGATaGCAAGAGGAGGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLRKYR*QEEGFI
Trigger: AATAAAGCCCTCCTCTTGTCATCTGTACTTTCTGAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTCTGCTATAGATGGTaGTGTTATGGAGTCCATAGG +
Preference number: 4 (lower is better)
Translates to: ESTDDKRRALLSTKTPALFCYRW*CYGVHR
Trigger: CCTATGGACTCCATAACATCACCATCTATAGCAGAA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAAGGTTTTGTTAGCCTaGGAGGAGGATCACAATTCG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVKVLLA*EEDHNS
Trigger: CGAATTGTGATCCTCCTCTCAGGCTAACAAAACCTT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGAAAGGTTTTGTTAGCCTaGGAGGAGGATCACAATTCG +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGKVLLA*EEDHNS
Trigger: CGAATTGTGATCCTCCTCTCAGGCTAACAAAACCTT...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGCTGTTTGGAGTGTATaGACTACTGTGGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCAVWSV*TTVGVF
Trigger: AAAAACTCCCACAGTAGTTCATACACTCCAAACAGC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATTCATTTAAGCATCTCTaGAACGGGAGCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYSFKHL*NGSNFS
Trigger: GGAGAAGTTGCTCCCGTTTCAGAGATGCTTAAATGA...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATACAATCAATTGTCTGTaGGCATTGCAAACCTGCACT +
Preference number: 4 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYTINCL*ALQTCT
Trigger: AGTGCAGGTTTGCAATGCTCACAGACAATTGATTGT...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCAATCAAAAAGGTGTCTaGCTTGGCCATTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGNQKGV*LGHSDN
Trigger: ATTGTCTGAATGGCCAAGTCAGACACCTTTTTGATT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGAGCTGCTTGATATTGGTAATGAGGAGCATTTaGGAAGACAGCCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: GYTVLTCLSILRESCLILVMRSI*EDSLHS
Trigger: TGAATGAAGGCTGTCTTCTCAAATGCTCCTCATTAC...CAATATCAAGCAGCTCTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCGATGCATATTTCAGTaGCTAAAAGCCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRCIFQ*LKAPSH
Trigger: ATGGGAAGGGGCTTTTAGTCACTGAAATATGCATCG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTATCATCTTCAACCCTaGAACAGAGGCCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVYHLQP*NRGPLK
Trigger: TTTCAGAGGGCCTCTGTTTCAGGGTTGAAGATGATA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCGGTGCCATTTCTCTaGCTAATTCCACATTTCAGA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSVPFL*LIPHFR
Trigger: TCTGAAATGTGGAATTAGTCAGAGAAATGGCACCGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGAGAAGAATCACTGTaGATTCGCAGGTGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCREESL*IRRCSF
Trigger: GAAAGAACACCTGCGAATTCACAGTGATTCTTCTCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTCTGTGAACTCAATTaGAGGTGGCTGTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVCELN*RWLFLN
Trigger: ATTCAGAAACAGCCACCTTCAATTGAGTTCACAGAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGTACCATTGTTAATTaGGGTCTGGATCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVCTIVN*GLDRGF
Trigger: GAAGCCACGATCCAGACCGCAATTAACAATGGTACA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR GCA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGACCTCAAAATCTGATGTaGAATTTGCATTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRPQNLM*NLHSSL
Trigger: CAGTGAAGAATGCAAATTGCACATCAGATTTTGAGG...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR GCA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAATCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: FLLQRACLCEIFQRLMLESGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTACACAACCTGCCCCAGTaGTTTGAAAGTCAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLHNLPQ*FESQQN
Trigger: GTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACACAACCTGCCCCAGTaGTTTGAAAGTCAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: NTETYDIAVEQGTLILVLHNLPQ*FESQQN
Trigger: GTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATCAGCGTGACAAAACTTaGAGAAGATCTCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYQRDKT*RRSPQR
Trigger: TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTG...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCAAATAATGAGGAGGTaGCTGGATGTTTCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TETYDIAVEQGTLILVLPQIMRR*LDVSRL
Trigger: AAGCCTTGAAACATCCAGGCACCTCCTCATTATTTG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCCTCCTCTACTTCGTaGACACTTTCTTCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPSSTS*TLSSFQ
Trigger: TTGGAAAGAAGAAAGTGTGCACGAAGTAGAGGAGGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGGAATTTCTTGTTTaGGACCTTGGAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGEFLV*DLGEES
Trigger: AGATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAACTCCGGCTTTGTTaGGGACTATGTTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKLRLC*GLCFHE
Trigger: CTCATGAAAACATAGTCCCCAACAAAGCCGGAGTTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTGAGTACAGACATGTaGTCCTTGTATGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLSTDM*SLYGLM
Trigger: CATCAACCCATACAAGGACCACATGTCTGTACTCAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTATAAAGAGTCTTTTGTaGGAGGGTTACTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCIKSLL*EGYCWE
Trigger: CTCCCAACAGTAACCCTCCCACAAAAGACTCTTTAT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTCCTTCATTTCTTCTaGACCATCTACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFLHFF*TIYRGL
Trigger: CAAGCCTCTGTAGATGGTCCAGAAGAAATGAAGGAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTATTTGCATTCTTCACTaGACCATCTACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCICILH*TIYRGL
Trigger: CAAGCCTCTGTAGATGGTCCAGTGAAGAATGCAAAT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638128.1
CDS-3UTR CCA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATAAAGATAACCAAGTCTaGACTGACAGTGATCCGAAG +
Preference number: 4 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYKDNQV*TDSDPK
Trigger: CTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTT...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGTCCTATCTCTTGTaGATTGGGACACAGATATGC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWSYLL*IGTQIC
Trigger: GCATATCTGTGTCCCAATCCACAAGAGATAGGACCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTCAGAAAGTACAGATaGCAAGAGGAGGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLRKYR*QEEGFI
Trigger: AATAAAGCCCTCCTCTTGTCATCTGTACTTTCTGAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTCTGCTATAGATGGTaGTGTTATGGAGTCCATAGG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFCYRW*CYGVHR
Trigger: CCTATGGACTCCATAACATCACCATCTATAGCAGAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGCTGTTTGGAGTGTATaGACTACTGTGGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVAVWSV*TTVGVF
Trigger: AAAAACTCCCACAGTAGTTCATACACTCCAAACAGC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTATCATTTAAGCATCTCTaGAACGGGAGCAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLSFKHL*NGSNFS
Trigger: GGAGAAGTTGCTCCCGTTTCAGAGATGCTTAAATGA...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTATTCCAAGTGGTAAGCTaGTGCTGTTGGCATAAACAG +
Preference number: 4 (lower is better)
Translates to: NTETYDIAVEQGTLILVLFQVVS*CCWHKQ
Trigger: CTGTTTATGCCAACAGCATCAGCTTACCACTTGGAA...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTTCCATGGAGCCTACTaGTTATTATCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGFHGAY*LLSFSF
Trigger: AAAGGAAAACGATAATAATCAGTAGGCTCCATGGAA...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTTTCCATGGAGCCTACTaGTTATTATCGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSFHGAY*LLSFSF
Trigger: AAAGGAAAACGATAATAATCAGTAGGCTCCATGGAA...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp GGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGAGCTGCTTGATATTGTTAGGGAGAGCTGCTTaGTATTGTCTTGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: GYTVLTCLSILRESCLILLGRAA*YCLVGI
Trigger: AATACCAACAAGACAATATCAAGCAGCTCTCCCTAA...CAATATCAAGCAGCTCTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCGGTGCCATTTCTCTaGCTAATTCCACATTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSVPFL*LIPHFR
Trigger: TCTGAAATGTGGAATTAGTCAGAGAAATGGCACCGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp TCACTGTTTTGCTATCTTAGGTCCACCTCTTTCTCACAATGCATCCTCATACATTCCCTGAAATTCTGCTaGATAACATCCCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: SLFCYLRSTSFSQCILIHSLKFC*ITSHSL
Trigger: TAAGGAATGGGATGTTATTCAGCAGAATTTCAGGGA...ATGTATGAGGATGCATTGTGAGAAAGAGGTGGACCTAAGATAGCAAAACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR GCA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACCTCCTTTATCTCTTTaGTCTGAAAAGACAACCAAA +
Preference number: 4 (lower is better)
Translates to: NCCKEKNLPHLRINAALLPPLSL*SEKTTK
Trigger: TTTGGTTGTCTTTTCAGAGCAAAGAGATAAAGGAGG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp AATTTCAGACACTTATATCCCAAATTAATGGGATTCTTGGCATCCTCTCTCCCTATCCTTAGGGAGAGCTaGTTGATATTGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NFRHLYPKLMGFLASSLPILRES*LILSCW
Trigger: CCAACAAGACAATATCAAGCAGCTCTCCCTAAGGAT...AGGGAGAGAGGATGCCAAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGGAATTTCTTGTTTaGGACCTTGGAGAAGAATCT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGEFLV*DLGEES
Trigger: AGATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTAATTACTATTCATGGTaGGAAACCCAAGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KRRALLSTKTPALLGTMFNYYSW*ETQVKG
Trigger: CCCCTTTACTTGGGTTTCCCACCATGAATAGTAATT...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAATTACTATTCATGGTaGGAAACCCAAGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCNYYSW*ETQVKG
Trigger: CCCCTTTACTTGGGTTTCCCACCATGAATAGTAATT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAAACTCCGGCTTTGTTaGGGACTATGTTTTCATGAG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVKLRLC*GLCFHE
Trigger: CTCATGAAAACATAGTCCCCAACAAAGCCGGAGTTT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGATTGAGTACAGACATGTaGTCCTTGTATGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGLSTDM*SLYGLM
Trigger: CATCAACCCATACAAGGACCACATGTCTGTACTCAA...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTGAGTACAGACATGTaGTCCTTGTATGGGTTGATG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLSTDM*SLYGLM
Trigger: CATCAACCCATACAAGGACCACATGTCTGTACTCAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCATAAAGAGTCTTTTGTaGGAGGGTTACTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVIKSLL*EGYCWE
Trigger: CTCCCAACAGTAACCCTCCCACAAAAGACTCTTTAT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFVTLL*SSAIDG
Trigger: ACCATCTATAGCAGAACTCCACAACAGTGTTACGAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTATTACTCCTGGAGTaGTCCAATTTTTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVLLLE*SNFSTG
Trigger: ACCAGTTGAAAAATTGGACCACTCCAGGAGTAATAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTCCTTCATTTCTTCTaGACCATCTACAGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFLHFF*TIYRGL
Trigger: CAAGCCTCTGTAGATGGTCCAGAAGAAATGAAGGAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CCA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATAGGCAAAGGCTTCCATaGAGCCTACTGATTATTATC +
Preference number: 4 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYRQRLP*SLLIII
Trigger: GATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCT...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CCA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTCTTGTTGGTATTCCTTaGCGTAAATGTTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPLVGIP*RKCFEE
Trigger: TTCCTCAAAACATTTACGCCAAGGAATACCAACAAG...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCACATCTCTTGGTTGTaGAGGGGAATTTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVHISWL*RGISCL
Trigger: CAAACAAGAAATTCCCCTCCACAACCAAGAGATGTG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTTTATTACAATGTGTaGGGCTCCAGATATACACAC +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVYYNV*GSRYTH
Trigger: GTGTGTATATCTGGAGCCCCACACATTGTAATAAAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAGCTTTGGCTTCATTaGCTTTTTCCAACGTATAGT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKLWLH*LFPTYS
Trigger: ACTATACGTTGGAAAAAGTCAATGAAGCCAAAGCTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTTACAGAACTGGCATaGAAATGGAGTGGATATGTT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFTELA*KWSGYV
Trigger: AACATATCCACTCCATTTTCATGCCAGTTCTGTAAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCAGATGAGTCACCTGTaGTTTTTCTTAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCQMSHL*FFLMSS
Trigger: TGAAGACATTAAGAAAAATCACAGGTGACTCATCTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCTCAAAATCTGATGTaGAATTTGCATTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPQNLM*NLHSSL
Trigger: CAGTGAAGAATGCAAATTGCACATCAGATTTTGAGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp AGTATTTGGCACATAGCTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATCCTCCTTTATCTCTTTaGTCTGAAAAGACAACCAAA +
Preference number: 4 (lower is better)
Translates to: SIWHIAIKAKASMEPTDYPPLSL*SEKTTK
Trigger: TTTGGTTGTCTTTTCAGAGCAAAGAGATAAAGGAGG...ATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAGCTATGTGCCAAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTTTTGTTTAGCTCTTaGGGAGAAATTCTGATACGC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVLFSS*GEILIR
Trigger: GCGTATCAGAATTTCTCCGCAAGAGCTAAACAAAAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAATTACTATTCATGGTaGGAAACCCAAGTAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVNYYSW*ETQVKG
Trigger: CCCCTTTACTTGGGTTTCCCACCATGAATAGTAATT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTTTCTTTACAGAACTaGCATGAAAATGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLSLQN*HENGVD
Trigger: ATCCACTCCATTTTCATGCCAGTTCTGTAAAGAAAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTCGTAACACTGTTGTaGAGTTCTGCTATAGATGGT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFVTLL*SSAIDG
Trigger: ACCATCTATAGCAGAACTCCACAACAGTGTTACGAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGAGTATTACTCCTGGAGTaGTCCAATTTTTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: STGLILVKWEGFVSLRGGVLLLE*SNFSTG
Trigger: ACCAGTTGAAAAATTGGACCACTCCAGGAGTAATAC...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTATTACTCCTGGAGTaGTCCAATTTTTCAACTGGT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVLLLE*SNFSTG
Trigger: ACCAGTTGAAAAATTGGACCACTCCAGGAGTAATAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAGGAGTATTACTCCTaGAGTGGTCCAATTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKEYYS*SGPIFQ
Trigger: TTGAAAAATTGGACCACTCCAGGAGTAATACTCCTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTTTATTACAATGTGTaGGGCTCCAGATATACACAC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVYYNV*GSRYTH
Trigger: GTGTGTATATCTGGAGCCCCACACATTGTAATAAAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTCCTTCATTTCTTCTGTaGGGGAAAATTATCTTTAGC +
Preference number: 4 (lower is better)
Translates to: KRRALLSTKTPALLGTMFPSFLL*GKIIFS
Trigger: GCTAAAGATAATTTTCCCCCACAGAAGAAATGAAGG...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 72 bp GAAGAAACAGAATTAGGGGAAGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTTACAGAGATTAAACCA +
Preference number: 4 (lower is better)
Translates to: EETELGEEPVLI*FLIRPFTEIKP
Trigger: TGGTTTAATCTCTGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTTCCCCTAATTCTGTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAAGCTTTGGCTTCATTaGCTTTTTCCAACGTATAGT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVKLWLH*LFPTYS
Trigger: ACTATACGTTGGAAAAAGTCAATGAAGCCAAAGCTT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTTACAGAACTGGCATaGAAATGGAGTGGATATGTT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFTELA*KWSGYV
Trigger: AACATATCCACTCCATTTTCATGCCAGTTCTGTAAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTAAATCAAAAAGGTGTCTaGCTTGGCCATTCAGACAAT +
Preference number: 4 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLNQKGV*LGHSDN
Trigger: ATTGTCTGAATGGCCAAGTCAGACACCTTTTTGATT...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCACAAGTGTTATCCTaGTATTTTCAGACTCAGGTA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSQVLS*YFQTQV
Trigger: TACCTGAGTCTGAAAATATCAGGATAACACTTGTGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTGAGCATGTTTATTTaGATAATTGCCCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLSMFI*IIAPLH
Trigger: GTGCAATGGGGCAATTATTCAAATAAACATGCTCAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCAGATGAGTCACCTGTaGTTTTTCTTAATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVQMSHL*FFLMSS
Trigger: TGAAGACATTAAGAAAAATCACAGGTGACTCATCTG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTATTAAGGCAAAGGCTTCCATGGAGCCTACTGATTATTATCGTTTTCCTTTTATCCGGATTTGATTTTTaGTACAACGTGCATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLRQRLPWSLLIIIVFLLSGFDF*YNVHVS
Trigger: AGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA...TAAAAGGAAAACGATAATAATCAGTAGGCTCCATGGAAGCCTTTGCCTTAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGAGAAAGAGTTAGGTTaGACATTCATTGTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVEKELG*TFIVCW
Trigger: CCAACAAACAATGAATGTGCAACCTAACTCTTTCTC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTGATGTTACTAAAATaGACATCTCTTGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLMLLK*TSLGCG
Trigger: TCCACAACCAAGAGATGTGCATTTTAGTAACATCAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTCAGACATACTAAGTaGTTTTCCATTCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFRHTK*FSILQL
Trigger: AAGTTGGAGAATGGAAAACCACTTAGTATGTCTGAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTTTCTTTACAGAACTaGCATGAAAATGGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLSLQN*HENGVD
Trigger: ATCCACTCCATTTTCATGCCAGTTCTGTAAAGAAAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTGTATGAACTACTGTaGGAGTTTTTAGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVYELL*EFLEDV
Trigger: CACATCTTCTAAAAACTCCCACAGTAGTTCATACAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGTTCAGACACGGAACTTaGGTGATGTTTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LNGSVGYTVLTCLSILREFRHGT*VMFFFL
Trigger: AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAA...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAAAACTCCTCAGATATaGGACATTGTAGTGATTGTC +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVKTPQI*DIVVIV
Trigger: GACAATCACTACAATGTCCCATATCTGAGGAGTTTT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
3UTR CAA 72 bp ACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTaGGTTTTACCCTATTTGAAAACAAATGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TYDIAVEQGTLI*VLPYLKTNGGR
Trigger: TCTTCCACCATTTGTTTTCAAATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR GCA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGTATACAGTTTTAACATaGCTCTCTATCCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LNGSVGYTVLTCLSILREYTVLT*LSILRE
Trigger: CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATA...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CCA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTCAGACATACTAAGTaGTTTTCCATTCTCCAACTT +
Preference number: 4 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFRHTK*FSILQL
Trigger: AAGTTGGAGAATGGAAAACCACTTAGTATGTCTGAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CCA 90 bp AATTTCAGACACTTATATCCCAAATTAATGGGATTCTTGGCATCCTCTCTCCCTATCTCTCTATTTAGGTaGTTTGTCTTTGCGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NFRHLYPKLMGFLASSLPISLFR*FVFAFF
Trigger: GAAAAACGCAAAGACAAACCACCTAAATAGAGAGAT...AGGGAGAGAGGATGCCAAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR GCA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGTTGTTAGTAAAGAGGTaGAATAACTTTGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: LNGSVGYTVLTCLSILRELLVKR*NNFGRN
Trigger: ATTCCTCCCAAAGTTATTGCACCTCTTTACTAACAA...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
3UTR CAA 72 bp GAAAATGGAGTGGATATGTTGTGGTTCTCAATCATTTaGTCATCAGTGACCAAATCTATTAAAGTACGTAGC +
Preference number: 4 (lower is better)
Translates to: ENGVDMLWFSII*SSVTKSIKVRS
Trigger: GCTACGTACTTTAATAGATTTGGTCACTGATGACAAAATGATTGAGAACCACAACATATCCACTCCATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
3UTR CAA 72 bp CTTGATGTAAGGTGTCTAGAAAGAACTCTTCTGCTCTaGAAATATAGAGATTTCACATCTCTACACAATACA +
Preference number: 4 (lower is better)
Translates to: LDVRCLERTLLL*KYRDFTSLHNT
Trigger: TGTATTGTGTAGAGATGTGAAATCTCTATATTTCAAGAGCAGAAGAGTTCTTTCTAGACACCTTACATCAAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: REQLLRPSLPLTITTSTSACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS GCA 90 bp GGCCGCACCGGTGGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTaGTCATTTCTGACTCCAAGGCGTTTTTCCTCCTGGGATTGGCTT +
Preference number: 5 (lower is better)
Translates to: GRTGGKQQQGISRSE*SFLTPRRFSSWDWL
Trigger: AAGCCAATCCCAGGAGGAAAAACGCCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCACCGGTGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS GCA 90 bp CCTGACTCAGCCTGGATAACGGGCTCCTCCAGACCATGTAGAAACTaGCGGGAAAAGTCTCGCTGCGCCCTGCGACTCCTTCAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: PDSAWITGSSRPCRN*REKSRCALRLLQSP
Trigger: CGGGGACTGAAGGAGTCGCAGGGCGCAGCGAGACTTTTCCCGGCAGTTTCTACATGGTCTGGAGGAGCCCGTTATCCAGGCTGAGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479735.1
CDS-3UTR CAA 90 bp TGGTTGGGCACACTAGCTGGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: WLGTLAGLVSWSRGLAIPLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...CGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: ALLEASNALLSYLQGRHTACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: REQLLRPSLPLTITTSTSLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS GCA 90 bp TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTCACTCACACACATGCTCC +
Preference number: 5 (lower is better)
Translates to: LIRADQMAVRMDSAP*FGSTQARSHSHTCS
Trigger: GGAGCATGTGTGTGAGTGAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392861.6
CDS GCA 90 bp TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATTGTTTGGTGTGTTGCACCCG +
Preference number: 5 (lower is better)
Translates to: LIRADQMAVRMDSAP*FGSTQARLFGVLHP
Trigger: CGGGTGCAACACACCAAACAATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409487.7
ENST00000462355.2
ENST00000484313.3
CDS GCA 90 bp TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCGTATGAGGGAATGCACACG +
Preference number: 5 (lower is better)
Translates to: LIRADQMAVRMDSAP*FGSTQARSYEGMHT
Trigger: CGTGTGCATTCCCTCATACGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435831.5
ENST00000629955.1
CDS-3UTR CAA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCAGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ACGTGTGGGGAGGACTCATGGTTGGGCACACTAGCTGGACTCGTCTCCTGGTCCTCCTGGTCCAGAGGGTaGGCAATACCGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: TCGEDSWLGTLAGLVSWSSWSRG*AIPSSS
Trigger: TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGA...GGACCAGGAGACGAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCTCCTGGTCCAGAGGGTaGGCAATACCGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: GADLSLACVSPYAARAGCSWSRG*AIPSSS
Trigger: TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGA...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS TCA 90 bp TGGGATTGGCTTGTTTGCGCCTCTTGCACCGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATAAGAGCGGATCAGATGGCAGTTCGC +
Preference number: 5 (lower is better)
Translates to: WDWLVCASCTGGHPP*SAASLIRADQMAVR
Trigger: GCGAACTGCCATCTGATCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 30 transcripts:
ENST00000303660.8
ENST00000392861.6
ENST00000409211.5
ENST00000409487.7
ENST00000419938.5
ENST00000427902.5
ENST00000431672.4
ENST00000434448.5
ENST00000435831.5
ENST00000444559.5
ENST00000453352.5
ENST00000461784.3
ENST00000462355.2
ENST00000465070.5
ENST00000465308.5
ENST00000470879.5
ENST00000472146.5
ENST00000476394.5
ENST00000484313.3
ENST00000539609.7
ENST00000558170.6
ENST00000627532.3
ENST00000629520.2
ENST00000629955.1
ENST00000630572.2
ENST00000636026.2
ENST00000636445.1
ENST00000636471.1
ENST00000636732.2
ENST00000637267.2
CDS TCA 90 bp TGGAGAAGGGGGACCTCGGAGGCAGGCAGGAGAGGAGGAGAATCCTaGAAACTCGGTGGAGGTTGGGAAGATGCTGTGCCTCGAGGATTA +
Preference number: 5 (lower is better)
Translates to: WRRGTSEAGRRGGES*KLGGGWEDAVPRGL
Trigger: TAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCTCCTGCCTGCCTCCGAGGTCCCCCTTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409211.5
ENST00000465308.5
CDS TCA 90 bp CCTGACCGTATGAGGGAATGCACACGGCGGTACAGTAAGACCGCTTaGCTCAGGGCTAGGCGGACCCTTTCCTTCGAAAAGTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PDRMRECTRRYSKTA*LRARRTLSFEKSSA
Trigger: GGCTGAGGACTTTTCGAAGGAAAGGGTCCGCCTAGCCCTGAGTCAAGCGGTCTTACTGTACCGCCGTGTGCATTCCCTCATACGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409487.7
CDS GCA 90 bp TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTAAAAATCGAGAGAGGCGC +
Preference number: 5 (lower is better)
Translates to: LIRADQMAVRMDSAP*FGSTQARSKNRERR
Trigger: GCGCCTCTCTCGATTTTTAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409211.5
ENST00000434448.5
ENST00000465308.5
ENST00000636732.2
CDS GCA 90 bp TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTAGCAACCAAACACAGCGA +
Preference number: 5 (lower is better)
Translates to: LIRADQMAVRMDSAP*FGSTQARSSNQTQR
Trigger: TCGCTGTGTTTGGTTGCTAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431672.4
ENST00000461784.3
ENST00000558170.6
CDS-3UTR CAA 90 bp GCTCACGTGTGGGGAGGACTCATGGTTGGGCACACTAGCTGGACTCGTCTCCTGCTTCCTCTTCCTCTCTaGGCAACAGAGCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AHVWGGLMVGHTSWTRLLLPLPL*ATELGS
Trigger: TGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAG...CAGGAGACGAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCCACACGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS TCA 90 bp CTCGATCGTATGAGGGAATGCACACGGCGGTACAGTAAGACCGCTTaGCTCAGGGCTAGGCGGACCCTTTCCTTCGAAAAGTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LDRMRECTRRYSKTA*LRARRTLSFEKSSA
Trigger: GGCTGAGGACTTTTCGAAGGAAAGGGTCCGCCTAGCCCTGAGTCAAGCGGTCTTACTGTACCGCCGTGTGCATTCCCTCATACGATCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435831.5
ENST00000629955.1
CDS GCA 90 bp TTGATAAGAGCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCCTTTCCTTCGAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LIRADQMAVRMDSAP*FGSTQARSFPSKSP
Trigger: AGGACTTTTCGAAGGAAAGGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630572.2
CDS-3UTR CAA 90 bp TTTCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: FLLDHLQRLVESRCCARGACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...ACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: SLLALLRRKACFYPNWLSACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp GGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATGCCGCTCGAGCTGGGTGCTTCTCGTGGCGGTACTaGATGTGCTCCTTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: GADLSLACVSPYAARAGCFSWRY*MCSFSD
Trigger: ATCACTGAAGGAGCACATCAAGTACCGCCACGAGAA...GCACCCAGCTCGAGCGGCATATGGTGACACACAAGCCAGGGACAGATCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CCTCATACATCATACTTCCCAGGTGGGCCTGCCCCTCCTGACACTCTGGAAAGATTACCCAGGCTGGCCTaGAACTCCTGGGTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: PHTSYFPGGPAPPDTLERLPRLA*NSWVQA
Trigger: TGCCTGAACCCAGGAGTTCAAGGCCAGCCTGGGTAA...TCTTTCCAGAGTGTCAGGAGGGGCAGGCCCACCTGGGAAGTATGATGTATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS TCA 90 bp GTGGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTGCTCATTTCTaGCTCCAAGGCTGTGTGGAGATAGTGGGGTATAATCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VASSSRASPAPSAHF*LQGCVEIVGYNQGK
Trigger: TTTCCCCTGATTATACCCCACTATCTCCACACAGCCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625161.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp GACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: DHLQRLVESRCCARGVPLPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...GAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGACCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGCTTCTCCGTCCCTCATaGCCTCTAACCATCACTACC +
Preference number: 5 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLLLRPS*PLTITT
Trigger: GGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAG...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp GCAATAGTGAGGGTTCAGACAGGCTGCAGGCAGAAACTGATGGGGTTGGGGATTTGTAGAGGCAGGGTTTaGCCGTGTTACCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: AIVRVQTGCRQKLMGLGICRGRV*PCYPGW
Trigger: CCAGCCTGGGTAACACGGCAAAACCCTGCCTCTACA...AATCCCCAACCCCATCAGTTTCTGCCTGCAGCCTGTCTGAACCCTCACTATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGACCGGCGGGCTGCTTTaGCAGCCCTCAGTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRTGGLL*QPSVPA
Trigger: TGCTGGGACTGAGGGCTGCAAAAGCAGCCCGCCGGT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS CCA 90 bp GACCTCGGAGGCAGGCAGGAGAGGAGGAGAATCCTGAAAACTCGGTaGAGGTTGGGAAGATGCTGTGCCTCGAGGATTAGTTTAAACAGG +
Preference number: 5 (lower is better)
Translates to: DLGGRQERRRILKTR*RLGRCCASRISLNR
Trigger: CCTGTTTAAACTAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCTCCTGCCTGCCTCCGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409211.5
ENST00000465308.5
CDS-3UTR CAA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAACTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGGAGGACTCATGGTaGGGCACACTAGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGGEDSW*GTLAGL
Trigger: GAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTGGGGAGGACTCATGGTaGGGCACACTAGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIGEDSW*GTLAGL
Trigger: GAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCC...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp ACACTAGCTGGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGTCATCCTCAGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: TLAGLVSWSRGLAIPSSSACRIS*LCQGCS
Trigger: GGAACACCCCTGGCACAACAACGAGATTCTACAAGC...TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGAGTGGGAGGGTTACTGTaGGGAGCTAACGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRVGGLL*GANGLE
Trigger: CTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCAC...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGAAAATAGTGTCTACCTaGGGAAGCCACGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLKIVST*GSHGAE
Trigger: CTCAGCACCGTGGCTTCCCAAGGTAGACACTATTTT...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATACTCTGTTGCCCAGGTaGGAGCATGGTGGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDTLLPR*EHGGGL
Trigger: CAGGCCACCACCATGCTCCAACCTGGGCAACAGAGT...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS TCA 90 bp AGCAACCTTCAAAGATCAAGCAGAGCCCAGCCCGCCGAGCGCCATTaGGGGACCAGCGCTCATATGTTGCTGAGTTGCATAAACAAACAG +
Preference number: 5 (lower is better)
Translates to: SNLQRSSRAQPAERH*GTSAHMLLSCINKQ
Trigger: CTGTTTGTTTATGCAACTCAGCAACATATGAGCGCTGGTCCCTCAATGGCGCTCGGCGGGCTGGGCTCTGCTTGATCTTTGAAGGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS-3UTR CAA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAACCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: SLLALLRRKACFYPNWLSPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTGGGGAGGACTCATGGTaGGGCACACTAGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: FLLDHLQRLVESRCCARGGEDSW*GTLAGL
Trigger: GAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCC...ACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGGCAGGTCAGCAGTaGGGCAAAAGCATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGGAGQQ*GKSIWS
Trigger: ACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGTGGGAGGGTTACTGTaGGGAGCTAACGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGVGGLL*GANGLE
Trigger: CTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCAC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TGGTTGGGCACACTAGCTGGACTCGTCTCCTGGTCCAGAGGGTTGGCAATACCGCCTTTTCTGACAATCTaGATGACCCGTTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: WLGTLAGLVSWSRGLAIPPFLTI*MTRFSS
Trigger: GGAGGAAAAACGGGTCATCAAGATTGTCAGAAAAGG...CGGTATTGCCAACCCTCTGGACCAGGAGACGAGTCCAGCTAGTGTGCCCAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS GCA 90 bp GGCAGGTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: GRSGPSTEACRISLL*QGCSTPPSLISSSS
Trigger: AGAGGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGACCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419938.5
CDS GCA 90 bp CAGGAGAGGAGGAGAATCCTGAAAACTCGGTGGAGGTTGGGAAGATaGTGTGCCTCGAGGATTAGTTTAAACAGGGGGCTGCGAAGTCTT +
Preference number: 5 (lower is better)
Translates to: QERRRILKTRWRLGR*CASRISLNRGLRSL
Trigger: AAGACTTCGCAGCCCCCTGTTTAAACTAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465308.5
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTGCTTGTTTGCGCCTCTaGCACCGGGGGCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: KRRALLSTKTPALLGTMFACLRL*HRGPSA
Trigger: GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGC...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCCTGGTCCAGAGGGTaGGCAATACCGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGSWSRG*AIPSSS
Trigger: TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TCTACAGAGGCTTGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACT +
Preference number: 5 (lower is better)
Translates to: STEACRISLLCQGCSTPPCRISL*CQGCST
Trigger: AGTGGAACACCCCTGGCACAACAACGAGATTCTACA...GGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp CTCCTTGGGTTAGCATTTGGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATTTTTCTTCTTGCCCATaGGCCTCTGGCGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LLGLAFGADLSLACVSPYFSSCP*ASGVPR
Trigger: CCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAA...ATATGGTGACACACAAGCCAGGGACAGATCAGCACCAAATGCTAACCCAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTGGGAGGGTTACTGTaGGGAGCTAACGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVGGLL*GANGLE
Trigger: CTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCCTGAGAACATTCAACTaGATCCCTGTTCTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: REQLLRPSLPLTITTSTSLRTFN*IPVLCH
Trigger: GTGGCAAAGAACAGGGATCAAGTTGAATGTTCTCAG...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTCTTCTCCGTCCCTCATaGCCTCTAACCATCACTACC +
Preference number: 5 (lower is better)
Translates to: MEMDIFGAPSELVPATQPLLRPS*PLTITT
Trigger: GGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAG...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGATGGAGATGGATATCTTaGGAGCGCCCTCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRWRWIS*ERPQNW
Trigger: CCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCA...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp GCACTGCTAGAGGCTAGCAACGCCCTCCTTTCCTACCTTCAGGGTAGACATACAAAAATAGTGTCTACCTaGGGAAGCCACGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALLEASNALLSYLQGRHTKIVST*GSHGAE
Trigger: CTCAGCACCGTGGCTTCCCAAGGTAGACACTATTTT...TGTATGTCTACCCTGAAGGTAGGAAAGGAGGGCGTTGCTAGCCTCTAGCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGCAGACAATTGCCCCCTaGTGGGAATGCGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKQTIAP*WECGNE
Trigger: TTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTG...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTCAGACAATTGCCCCCTaGTGGGAATGCGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: MEMDIFGAPSELVPATQPQTIAP*WECGNE
Trigger: TTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTG...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TCAATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACATGGCCATTCAGACAATaGCCCCCTTGTGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: SIVCEHCKPALPLSVTGTWPFRQ*PPCGNA
Trigger: CGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCA...TGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGAAAAAGGTGTCTGACTaGGCCATTCAGACAATTGCC +
Preference number: 5 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLKKVSD*AIQTIA
Trigger: GGCAATTGTCTGAATGGCCAAGTCAGACACCTTTTT...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp GCAATAGTGAGGGTTCAGACAGGCTGCAGGCAGAAACTGATGGGGTTGGGGATTCAATTAGCTGACCTGTaGAATCCTCCACAGGGGACA +
Preference number: 5 (lower is better)
Translates to: AIVRVQTGCRQKLMGLGIQLADL*NPPQGT
Trigger: TGTCCCCTGTGGAGGATTCAACAGGTCAGCTAATTG...AATCCCCAACCCCATCAGTTTCTGCCTGCAGCCTGTCTGAACCCTCACTATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR CAA 90 bp CCTGAACATAACTACAACTCCACTACAGCCTTGACCTTCCCAGGCTCAGGTGATAACTCCACTACAGCCTaGACCTTCCCAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: PEHNYNSTTALTFPGSGDNSTTA*TFPGSG
Trigger: ACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTT...ATCACCTGAGCCTGGGAAGGTCAAGGCTGTAGTGGAGTTGTAGTTATGTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR CAA 90 bp GGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTGCTCGATCTGCGAAGTCTaGTTTGTAGTTTTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GDGYLWSALRTGTCHTTCSICEV*FVVLAR
Trigger: TCTGGCCAAAACTACAAACAAGACTTCGCAGATCGA...GCAGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAACTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: FLLQRACLCEIFQRLMLELGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp ACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: TSPSLIASNHHYQHLHSFFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...AAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGT
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCCTGGTCCAGAGGGTaGGCAATACCGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSWSRG*AIPSSS
Trigger: TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCTTCCTCTTCCTCTCTaGGCAACAGAGCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGLPLPL*ATELGS
Trigger: TGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGACRIS*LCQGCS
Trigger: GGAACACCCCTGGCACAACAACGAGATTCTACAAGC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTTTCTTCTTGCCCATaGGCCTCTGGCGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFSSCP*ASGVPR
Trigger: CCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCAGGTCATTTTCTTCTaGCCCATTGGCCTCTGGCGT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGQVIFF*PIGLWR
Trigger: ACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGACACCTAAGTGCTGCATaGGACTCTGAGCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRHLSAA*DSEQMD
Trigger: ATCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTG...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAGGAAGACGCGCCACCTATCTTaGTGGGGAGGGATAATTGAA +
Preference number: 5 (lower is better)
Translates to: RPSLPLTITTSTSTPLRKTRHLS*WGGIIE
Trigger: TTCAATTATCCCTCCCCACAAAGATAGGTGGCGCGT...CTTCCTTAAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465070.5
CDS-3UTR CAA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTTGGCCATTCAGACAATaGCCCCCTTGTGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: SLLALLRRKACFYPNWLSWPFRQ*PPCGNA
Trigger: CGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCA...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGCAGGGGTGTTCAGTaGTTCCAGTGTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGGRGVQ*FQCFLI
Trigger: GATGAGGAAACACTGGAACAACTGAACACCCCTGCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS TCA 90 bp TGCACCCGCGAGGGGATCAGAGAGACAAGAATTACATCTTCAAAATaGGTCATAACTCCTGACCGTATGAGGGAATGCACACGGCGGTAC +
Preference number: 5 (lower is better)
Translates to: CTREGIRETRITSSK*VITPDRMRECTRRY
Trigger: GTACCGCCGTGTGCATTCCCTCATACGGTCAGGAGTTATGACTCATTTTGAAGATGTAATTCTTGTCTCTCTGATCCCCTCGCGGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409487.7
ENST00000462355.2
CDS TCA 90 bp GTCTTCATCACTGCAGTGTGCGGCGGTCCCAGTCATGATCTTCCCTaGCGCATTTCATTTTTCACCTCCACCTACCATAGGTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: VFITAVCGGPSHDLP*RISFFTSTYHRFSS
Trigger: AGATGAGAACCTATGGTAGGTGGAGGTGAAAAATGAAATGCGTCAGGGAAGATCATGACTGGGACCGCCGCACACTGCAGTGATGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636820.1
CDS GCA 90 bp CACTTACCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: HLPGPSTEACRISLL*QGCSTPPSLISSSS
Trigger: AGAGGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGGTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461784.3
ENST00000472146.5
ENST00000476394.5
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAACCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTACCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: NCCKEKNLPHLRINAALLPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TGTAGAATCTCGTTGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: CRISLLCQGCSTPPSLISFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...TGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434448.5
CDS-3UTR CAA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ISETGATSPSLIASNHHYFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCTTCCTCTTCCTCTCTaGGCAACAGAGCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRLPLPL*ATELGS
Trigger: TGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGCRISL*CQGCST
Trigger: AGTGGAACACCCCTGGCACAACAACGAGATTCTACA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRACRIS*LCQGCS
Trigger: GGAACACCCCTGGCACAACAACGAGATTCTACAAGC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCAGGTCATTTTCTTCTaGCCCATTGGCCTCTGGCGT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRQVIFF*PIGLWR
Trigger: ACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGGGGGCAGGTCAGCAGTaGGGCAAAAGCATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVGAGQQ*GKSIWS
Trigger: ACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCC...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTCTCGTGGCGGTACTaGATGTGCTCCTTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGFSWRY*MCSFSD
Trigger: ATCACTGAAGGAGCACATCAAGTACCGCCACGAGAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp GTACTCCTCGATGCTGACTGCATGACCATCGCGTTCCTCCAGTTTTCTTTTGGCGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGG +
Preference number: 5 (lower is better)
Translates to: VLLDADCMTIAFLQFSFGGEEPV*ILFLIR
Trigger: CCGAATGAGAAACAATATCAAGACGGGTTCTTCCCC...GCCAAAAGAAAACTGGAGGAACGCGATGGTCATGCAGTCAGCATCGAGGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCACCTAAGTGCTGCATaGGACTCTGAGCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGHLSAA*DSEQMD
Trigger: ATCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGATCCTTGTTCCTCAGGTaGAGAGCATGGATCCTTCAT +
Preference number: 5 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRSLFLR*RAWILH
Trigger: ATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGA...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGCTGCAGGACCGCCTaGATCTCTTCATTCATCTTA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGGCRTA*ISSFIL
Trigger: TAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGGTCCTTGTATGGGTaGATGGGGCTTGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGWSLYG*MGLVIP
Trigger: AGGAATGACAAGCCCCATCAACCCATACAAGGACCA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGACAGACATGTGGTCCTaGTATGGGTTGATGGGGCTT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGTDMWS*YGLMGL
Trigger: AAGCCCCATCAACCCATACAAGGACCACATGTCTGT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAACGCAGGCTCGATTGTTaGGTGTGTTGCACCCGCGAG +
Preference number: 5 (lower is better)
Translates to: FLLQRACLCEIFQRLMLERRLDC*VCCTRE
Trigger: CTCGCGGGTGCAACACACCAAACAATCGAGCCTGCG...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462355.2
CDS-3UTR CAA 90 bp GAGCATTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCAGCACGCAGGCTCGATaGTTTGGTGTGTTGCACCCG +
Preference number: 5 (lower is better)
Translates to: EHLRRQPSFRHGTWVMFFSTQAR*FGVLHP
Trigger: CGGGTGCAACACACCAAACAATCGAGCCTGCGTGCT...GAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAATGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGACGCGCCACCTATCTTaGTGGGGAGGGATAATTGAA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGTRHLS*WGGIIE
Trigger: TTCAATTATCCCTCCCCACAAAGATAGGTGGCGCGT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636471.1
CDS-3UTR CAA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACAAAATAGTGTCTACCTaGGGAAGCCACGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ISETGATSPSLIASNHHYKIVST*GSHGAE
Trigger: CTCAGCACCGTGGCTTCCCAAGGTAGACACTATTTT...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAACAGACAATTGCCCCCTaGTGGGAATGCGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKQTIAP*WECGNE
Trigger: TTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTG...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCTATCTCTTGTGGATaGGGACACAGATATGCCCCA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGPISCG*GHRYAP
Trigger: TGGGGCATATCTGTGTCCCAATCCACAAGAGATAGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGCAGGGGTGTTCAGTaGTTCCAGTGTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGRGVQ*FQCFLI
Trigger: GATGAGGAAACACTGGAACAACTGAACACCCCTGCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp GCAATAGTGAGGGTTCAGACAGGCTGCAGGCAGAAACTGATGGGGTTGGGGATTTTCACAATGACACTCTaGGAGGCAATAGTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: AIVRVQTGCRQKLMGLGIFTMTL*EAIVRV
Trigger: AACCCTCACTATTGCCTCCAAGAGTGTCATTGTGAA...AATCCCCAACCCCATCAGTTTCTGCCTGCAGCCTGTCTGAACCCTCACTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS GCA 90 bp TTCTTCACTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FFTGPSTEACRISLL*QGCSTPPSLISSSS
Trigger: AGAGGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409211.5
ENST00000431672.4
ENST00000440875.6
ENST00000539609.7
ENST00000638128.1
CDS GCA 90 bp GAAGATTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: EDSGPSTEACRISLL*QGCSTPPSLISSSS
Trigger: AGAGGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AATTTCAGACACTTATATCCCAAATTAATGGGATTCTTGGCATCCTCTCTCCCTCTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: NFRHLYPKLMGFLASSLPLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...AGGGAGAGAGGATGCCAAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGACTGGGATTGGCTTGTTaGCGCCTCTTGCACCGGGGG +
Preference number: 5 (lower is better)
Translates to: STGLILVKWEGFVSLRGGLGLAC*RLLHRG
Trigger: CCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAG...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGGAGGACTCATGGTaGGGCACACTAGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGEDSW*GTLAGL
Trigger: GAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRCRISL*CQGCST
Trigger: AGTGGAACACCCCTGGCACAACAACGAGATTCTACA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCCAGGTCATTTTCTTCTaGCCCATTGGCCTCTGGCGT +
Preference number: 5 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFQVIFF*PIGLWR
Trigger: ACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTG...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTCTCGTGGCGGTACTaGATGTGCTCCTTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFSWRY*MCSFSD
Trigger: ATCACTGAAGGAGCACATCAAGTACCGCCACGAGAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTCTGTGCATTTGAACTaGCGATTACCTGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGSVHLN*RLPAPW
Trigger: CCAAGGAGCAGGTAATCGCAAGTTCAAATGCACAGA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ATGGTGGGAAACCCAAGTAAAGGGGCTTCCATCCCTACACCTAAGTGCTGCATTCCACACTCTGTGCATTaGAACTTGCGATTACCTGCT +
Preference number: 5 (lower is better)
Translates to: MVGNPSKGASIPTPKCCIPHSVH*NLRLPA
Trigger: AGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTGG...AATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGGTTTCCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGGEEPV*ILFLIR
Trigger: CCGAATGAGAAACAATATCAAGACGGGTTCTTCCCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCACCTAAGTGCTGCATaGGACTCTGAGCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRHLSAA*DSEQMD
Trigger: ATCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGGAGAAGTAACTCCTaGTTCCTCAGGTTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGRRSNS*FLRLRA
Trigger: TGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGCTGCAGGACCGCCTaGATCTCTTCATTCATCTTA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGCRTA*ISSFIL
Trigger: TAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGGTCCTTGTATGGGTaGATGGGGCTTGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRWSLYG*MGLVIP
Trigger: AGGAATGACAAGCCCCATCAACCCATACAAGGACCA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAACGATTGTTTGGTGTGTaGCACCCGCGAGGGGATCAG +
Preference number: 5 (lower is better)
Translates to: FLLQRACLCEIFQRLMLERLFGV*HPRGDQ
Trigger: CTGATCCCCTCGCGGGTGCAACACACCAAACAATCG...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000462355.2
CDS-3UTR CAA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCAGCACGCAGGCTCGATaGTTTGGTGTGTTGCACCCG +
Preference number: 5 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGSTQAR*FGVLHP
Trigger: CGGGTGCAACACACCAAACAATCGAGCCTGCGTGCT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462355.2
CDS-3UTR CAA 90 bp ATGGAGATGGATATCTTTGGAGCGCCCTCAGAACTGGTACCTGCCACACAACCTCTGAGAACATTCAACTaGATCCCTGTTCTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: MEMDIFGAPSELVPATQPLRTFN*IPVLCH
Trigger: GTGGCAAAGAACAGGGATCAAGTTGAATGTTCTCAG...AGGTTGTGTGGCAGGTACCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCACTCCTTTAAAAAGGTGTCTGACTaGGCCATTCAGACAATTGCC +
Preference number: 5 (lower is better)
Translates to: TSPSLIASNHHYQHLHSFKKVSD*AIQTIA
Trigger: GGCAATTGTCTGAATGGCCAAGTCAGACACCTTTTT...AAAGGAGTGGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ATAGCCCCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCAAAAAAGGTGTCTGACTaGGCCATTCAGACAATTGCC +
Preference number: 5 (lower is better)
Translates to: IAPSLVCVQRDKTCRRSPKKVSD*AIQTIA
Trigger: GGCAATTGTCTGAATGGCCAAGTCAGACACCTTTTT...TGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGGGGCTAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CCCCCTTGTGGGAATGCGGGAATGAATGGTACAGTGGACACCCCAGCACCATTGTTCAACCTTCACATCTaGGCTAAAAAGCATATTTGG +
Preference number: 5 (lower is better)
Translates to: PPCGNAGMNGTVDTPAPLFNLHI*AKKHIW
Trigger: CCAAATATGCTTTTTAGCCAAGATGTGAAGGTTGAA...CAATGGTGCTGGGGTGTCCACTGTACCATTCATTCCCGCATTCCCACAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACCAGCACCTCCTTCAACCTTCACATCTaGGCTAAAAAGCATATTTGG +
Preference number: 5 (lower is better)
Translates to: REQLLRPSLPLTITTSTSFNLHI*AKKHIW
Trigger: CCAAATATGCTTTTTAGCCAAGATGTGAAGGTTGAA...GGAGGTGCTGGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCTATCTCTTGTGGATaGGGACACAGATATGCCCCA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPISCG*GHRYAP
Trigger: TGGGGCATATCTGTGTCCCAATCCACAAGAGATAGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTGGAGGGGAATTTCTaGTTTGCGACCTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVEGNF*FATLEK
Trigger: CTTCTCCAAGGTCGCAAACAAGAAATTCCCCTCCAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS TCA 90 bp AAAGAGCAAAGGAGAGAGGGCTTATCTCAGAGTAAAGCTATGTGCTaGGGTATGACTGTAGACAGCCAGGCACCGGGGATAAAACACTAC +
Preference number: 5 (lower is better)
Translates to: KEQRREGLSQSKAMC*GMTVDSQAPGIKHY
Trigger: GTAGTGTTTTATCCCCGGTGCCTGGCTGTCTACAGTCATACCTCAGCACATAGCTTTACTCTGAGATAAGCCCTCTCTCCTTTGCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS TCA 90 bp TACAAAGTGAGTCAGGCGACTGAGGATCATCTGACTGAACTTTCTTaGAACCGACACACATTCTTGTCTGCGGGCAACTCGCTTTTTGCC +
Preference number: 5 (lower is better)
Translates to: YKVSQATEDHLTELS*NRHTFLSAGNSLFA
Trigger: GGCAAAAAGCGAGTTGCCCGCAGACAAGAATGTGTGTCGGTTTCAAGAAAGTTCAGTCAGATGATCCTCAGTCGCCTGACTCACTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625161.1
CDS GCA 90 bp TTCATTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTTGTaGCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FISGPSTEACRISLL*QGCSTPPSLISSSS
Trigger: AGAGGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303660.8
CDS GCA 90 bp ACAGCGAGAGCCGCACCATTCATCCATCCCACAGAGTTGTCTACATaGCAGGCCCATTGCATCATTGTCAGTTTTATTCTATCTGCAACT +
Preference number: 5 (lower is better)
Translates to: TARAAPFIHPTELST*QAHCIIVSFILSAT
Trigger: AGTTGCAGATAGAATAAAACTGACAATGATGCAATGGGCCTGGCATGTAGACAACTCTGTGGGATGGATGAATGGTGCGGCTCTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS-3UTR CAA 90 bp AATTTCAGACACTTATATCCCAAATTAATGGGATTCTTGGCATCCTCTCTCCCTCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: NFRHLYPKLMGFLASSLPPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...AGGGAGAGAGGATGCCAAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPPGIG*FAPLAP
Trigger: CGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGGAGGACTCATGGTaGGGCACACTAGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGEDSW*GTLAGL
Trigger: GAGTCCAGCTAGTGTGCCCAACCATGAGTCCTCCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGACTTCCTCTTCCTCTCTaGGCAACAGAGCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRLPLPL*ATELGS
Trigger: TGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAG...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGGCAGGTCAGCAGTaGGGCAAAAGCATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGAGQQ*GKSIWS
Trigger: ACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCCACACTCTGTGCATTaGAACTTGCGATTACCTGCT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRPHSVH*NLRLPA
Trigger: AGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTGG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTAAACCAATACATTTCTaGCTGCTGATGTGCGAACTG +
Preference number: 5 (lower is better)
Translates to: GFWVNNGCVTALKVLLDAKPIHF*LLMCEL
Trigger: CAGTTCGCACATCAGCAGCAAGAAATGTATTGGTTT...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGG +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRGEEPV*ILFLIR
Trigger: CCGAATGAGAAACAATATCAAGACGGGTTCTTCCCC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCCTTGTTCCTCAGGTaGAGAGCATGGATCCTTCAT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSLFLR*RAWILH
Trigger: ATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGGAGAAGTAACTCCTaGTTCCTCAGGTTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRRSNS*FLRLRA
Trigger: TGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTACAAAGGTAACGTTCATGCTGATGCAAAGGGATGGGGCCAGGAAAACTTTCGGCTGCAGGACCGCCTaGATCTCTTCATTCATCTTA +
Preference number: 5 (lower is better)
Translates to: LTKVTFMLMQRDGARKTFGCRTA*ISSFIL
Trigger: TAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGCC...GAAAGTTTTCCTGGCCCCATCCCTTTGCATCAGCATGAACGTTACCTTTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGATGGGGACCTGGAATTaGAGTACTGGTAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGMGTWN*STGRLF
Trigger: GAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCAT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CCCAGCCTTGTGTGTGTGCAGCGTGACAAAACTTGCAGAAGATCTCCACAGAGAAAGCAGTTTCCGGATTaGATTTTTGCTACAACGTGC +
Preference number: 5 (lower is better)
Translates to: PSLVCVQRDKTCRRSPQRKQFPD*IFATTC
Trigger: GCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTT...TCTCTGTGGAGATCTTCTGCAAGTTTTGTCACGCTGCACACACACAAGGCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp ATTGTCTGTGAGCATTGCAAACCTGCACTCCCTCTCTCTGTGACAGGCACAAAACTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: IVCEHCKPALPLSVTGTKLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...TTTTGTGCCTGTCACAGAGAGAGGGAGTGCAGGTTTGCAATGCTCACAGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AGCCTACTGGCTCTGCTACGAAGGAAAGCATGTTTCTACCCCAATTGGCTTAGTCTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: SLLALLRRKACFYPNWLSLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...ACTAAGCCAATTGGGGTAGAAACATGCTTTCCTTCGTAGCAGAGCCAGTAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CTTTGCAAAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTGGAGATGGATATCTTaGGAGCGCCCTCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: LCKDNQVWTDSDPKETSLWRWIS*ERPQNW
Trigger: CCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCA...CAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTTTGCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AAAACAGGCTCCCTAGAAGCTCATCAACTTTACGAAGAAAGCTACTTGCCAAAGTGGCCATTCAGACAATaGCCCCCTTGTGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: KTGSLEAHQLYEESYLPKWPFRQ*PPCGNA
Trigger: CGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCA...CTTTGGCAAGTAGCTTTCTTCGTAAAGTTGATGAGCTTCTAGGGAGCCTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AACTGTTGCAAGGAAAAGAATCTCCCACATCTTAGAATAAACGCGGCACTGCTATGGCCATTCAGACAATaGCCCCCTTGTGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: NCCKEKNLPHLRINAALLWPFRQ*PPCGNA
Trigger: CGCATTCCCACAAGGGGGCAATTGTCTGAATGGCCA...TAGCAGTGCCGCGTTTATTCTAAGATGTGGGAGATTCTTTTCCTTGCAACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGTTGGTCCTATCTCTaGTGGATTGGGACACAGATA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGCWSYL*WIGTQI
Trigger: TATCTGTGTCCCAATCCACAAGAGATAGGACCAACA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGGGGAATTTCTTGTTaGCGACCTTGGAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGRGISC*RPWRRI
Trigger: GATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGATGCACATCTCTTGGTaGTGGAGGGGAATTTCTTGT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGMHISW*WRGISC
Trigger: ACAAGAAATTCCCCTCCACAACCAAGAGATGTGCAT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTATACACACACTTGTTaGTGTGTATATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGYTHTC*CVYPGP
Trigger: GGGCCCTGGATATACACACAAACAAGTGTGTGTATA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTCTCTAGAGGAAAGTaGCTCCAAGTGGGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFSRGK*LQVGPG
Trigger: GCCCGGGCCCACTTGGAGCAACTTTCCTCTAGAGAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637304.1
CDS TCA 90 bp ATCACACAATGGAAAGAGGAAAGACATGTCACTTCCATCGATATGTaGCCTTGTCCAACTGCTGCAGTCTGTGGCTTCTCCACCAAGGTT +
Preference number: 5 (lower is better)
Translates to: ITQWKEERHVTSIDM*PCPTAAVCGFSTKV
Trigger: AACCTTGGTGGAGAAGCCACAGACTGCAGCAGTTGGACAAGGTCACATATCGATGGAAGTGACATGTCTTTCCTCTTTCCATTGTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS GCA 90 bp TTTATCCATCTGAGGTTGCCTTTGATAGCACTCACAGCACGGAAGTaGCACTCACGGGTACTTAGAGCTGCGTCATTTAGGAGCATAAAA +
Preference number: 5 (lower is better)
Translates to: FIHLRLPLIALTARK*HSRVLRAASFRSIK
Trigger: TTTTATGCTCCTAAATGACGCAGCTCTAAGTACCCGTGAGTGGCACTTCCGTGCTGTGAGTGCTATCAAAGGCAACCTCAGATGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS GCA 90 bp GGCTGCAGCCCTAGCTTCTATACACCCACTCAGTACCGCAACAATTaGAACTGTGTGCCTCTGTTTAAAGAGTTTACAAGTCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: GCSPSFYTPTQYRNN*NCVPLFKEFTSPSE
Trigger: TTCAGAAGGACTTGTAAACTCTTTAAACAGAGGCACACAGTTGCAATTGTTGCGGTACTGAGTGGGTGTATAGAAGCTAGGGCTGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CCA 90 bp TACCCTGTGAGTTTCTGGCCTGCCAATTTCAACTTGAAGCTTGACTaGGCTGATTTGATGCAAATACCTCCAGGGAAAACCCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: YPVSFWPANFNLKLD*ADLMQIPPGKTLKL
Trigger: CAGTTTCAGGGTTTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACAGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS CCA 90 bp CTGTACTTTGGCTGTCTCTTTTCCAGTCTCTACCCTGTGAGTTTCTaGCCTGCCAATTTCAACTTGAAGCTTGACTGGGCTGATTTGATG +
Preference number: 5 (lower is better)
Translates to: LYFGCLFSSLYPVSF*PANFNLKLDWADLM
Trigger: CATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACAGGGTAGAGACTGGAAAAGAGACAGCCAAAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCCTGGTCCAGAGGGTaGGCAATACCGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSWSRG*AIPSSS
Trigger: TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTCTTCACTGTACCATaGTTAATTGCGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGFFTVP*LIAVWI
Trigger: GATCCAGACCGCAATTAACAATGGTACAGTGAAGAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTTTCTTCTTGCCCATaGGCCTCTGGCGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFSSCP*ASGVPR
Trigger: CCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGGCAGGTCAGCAGTaGGGCAAAAGCATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGAGQQ*GKSIWS
Trigger: ACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTCCTTGGGTTAGCATTTGGTGCTGATCTGTCCCTGGCTTGTGTGTCACCATATAGATGGTGTTTATATTaGAAGGCCTTGCCACACTCT +
Preference number: 5 (lower is better)
Translates to: LLGLAFGADLSLACVSPYRWCLY*KALPHS
Trigger: AGAGTGTGGCAAGGCCTTCAAATATAAACACCATCT...ATATGGTGACACACAAGCCAGGGACAGATCAGCACCAAATGCTAACCCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAAACCAATACATTTCTaGCTGCTGATGTGCGAACTG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGKPIHF*LLMCEL
Trigger: CAGTTCGCACATCAGCAGCAAGAAATGTATTGGTTT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGAACAGACATGTGGTCCTaGTATGGGTTGATGGGGCTT +
Preference number: 5 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRTDMWS*YGLMGL
Trigger: AAGCCCCATCAACCCATACAAGGACCACATGTCTGT...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGATGGGGACCTGGAATTaGAGTACTGGTAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRMGTWN*STGRLF
Trigger: GAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCAT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTGGGAGGGTTACTGTaGGGAGCTAACGGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVGGLL*GANGLE
Trigger: CTCCAAGCCGTTAGCTCCCAACAGTAACCCTCCCAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ACGGCTTGGAGCTTCTTTCCAGGGATGGGGACCTGGAATTTGAGTACTGGTAGACAATTCGTAACACTGTaGTGGAGTTCTGCTATAGAT +
Preference number: 5 (lower is better)
Translates to: TAWSFFPGMGTWNLSTGRQFVTL*WSSAID
Trigger: ATCTATAGCAGAACTCCACAACAGTGTTACGAATTG...TCTACCAGTACTCAAATTCCAGGTCCCCATCCCTGGAAAGAAGCTCCAAGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp ATCTCTGAAACGGGAGCAACTTCTCCGTCCCTCATTGCCTCTAACCATCACTACAAGCAGTTTCCGGATTaGATTTTTGCTACAACGTGC +
Preference number: 5 (lower is better)
Translates to: ISETGATSPSLIASNHHYKQFPD*IFATTC
Trigger: GCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTT...GTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAGTTGCTCCCGTTTCAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAATGGAGATGGATATCTTaGGAGCGCCCTCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEWRWIS*ERPQNW
Trigger: CCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCA...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AAGATAACCAAGTCTGGACTGACAGTGATCCGAAGGAAACTTCCTTGTCTAAGTCAGACAATTGCCCCCTaGTGGGAATGCGGGAATGAA +
Preference number: 5 (lower is better)
Translates to: KITKSGLTVIRRKLPCLSQTIAP*WECGNE
Trigger: TTCATTCCCGCATTCCCACAAGGGGGCAATTGTCTG...ACTTAGACAAGGAAGTTTCCTTCGGATCACTGTCAGTCCAGACTTGGTTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGGGGAATTTCTTGTTaGCGACCTTGGAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRGISC*RPWRRI
Trigger: GATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTATACACACACTTGTTaGTGTGTATATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRYTHTC*CVYPGP
Trigger: GGGCCCTGGATATACACACAAACAAGTGTGTGTATA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS TCA 90 bp TTGTGGGACGAAAGAATGTCAAGGACAATTCCAAACACAAAACTTTaGTTGTGCTGGAACCGGAAAGGCACAGTAAGAACTCCACTGCGC +
Preference number: 5 (lower is better)
Translates to: LWDERMSRTIPNTKL*LCWNRKGTVRTPLR
Trigger: GCGCAGTGGAGTTCTTACTGTGCCTTTCCGGTTCCAGCACAATCAAAGTTTTGTGTTTGGAATTGTCCTTGACATTCTTTCGTCCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS GCA 90 bp CATTGCATCATTGTCAGTTTTATTCTATCTGCAACTGGACAAGGCTaGAGCCCTAGCTTCTATACACCCACTCAGTACCGCAACAATTGC +
Preference number: 5 (lower is better)
Translates to: HCIIVSFILSATGQG*SPSFYTPTQYRNNC
Trigger: GCAATTGTTGCGGTACTGAGTGGGTGTATAGAAGCTAGGGCTGCAGCCTTGTCCAGTTGCAGATAGAATAAAACTGACAATGATGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CCA 90 bp ATTCTTCACTGTACCATTGTTAATTGCGGTCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTCTTCCTTCATTTCTGGACCATCTAC +
Preference number: 5 (lower is better)
Translates to: ILHCTIVNCGLDRGF*PHSVIVFLHFWTIY
Trigger: GTAGATGGTCCAGAAATGAAGGAAGACTATGACACTATGGGGCCAGAAGCCACGATCCAGACCGCAATTAACAATGGTACAGTGAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303660.8
CDS CCA 90 bp TCTGAAAGAAAAACAGAACCGTTGCATATTAATGCCCCCAGGCCCTaGACGATCACACAATGGAAAGAGGAAAGACATGTCACTTCCATC +
Preference number: 5 (lower is better)
Translates to: SERKTEPLHINAPRP*TITQWKEERHVTSI
Trigger: GATGGAAGTGACATGTCTTTCCTCTTTCCATTGTGTGATCGTCCAGGGCCTGGGGGCATTAATATGCAACGGTTCTGTTTTTCTTTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CCA 90 bp TGTGCTGAATCTTCCCACATTCCTAGTGAGACAGATGGTGTTACATaGGACACAGGGAGGTTTGTTCAAACAGCAGCAACCTTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: CAESSHIPSETDGVT*DTGRFVQTAATFKD
Trigger: ATCTTTGAAGGTTGCTGCTGTTTGAACAAACCTCCCTGTGTCCCATGTAACACCATCTGTCTCACTAGGAATGTGGGAAGATTCAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTCTTGTTTGTAGTTTaGGCCAGAAATGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVLFVV*ARNGEK
Trigger: CTTCTCACCATTTCTGGCCAAAACTACAAACAAGAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCTGATGCTGGAATTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FLLQRACLCEIFQRLMLEFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...TTCCAGCATCAGCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCCTGGTCCAGAGGGTaGGCAATACCGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSWSRG*AIPSSS
Trigger: TGAGGATGACGGTATTGCCAACCCTCTGGACCAGGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCTTCCTCTTCCTCTCTaGGCAACAGAGCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCLPLPL*ATELGS
Trigger: TGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: KRRALLSTKTPALLGTMFACRIS*LCQGCS
Trigger: GGAACACCCCTGGCACAACAACGAGATTCTACAAGC...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCACRIS*LCQGCS
Trigger: GGAACACCCCTGGCACAACAACGAGATTCTACAAGC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTCTTCACTGTACCATaGTTAATTGCGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFFTVP*LIAVWI
Trigger: GATCCAGACCGCAATTAACAATGGTACAGTGAAGAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp GGCTTCTGGGTAAATAATGGCTGTGTCACTGCGCTGAAGGTACTCCTCGATGCTAATCTGATGTGCAATTaGCATTCTTCACTGTACCAT +
Preference number: 5 (lower is better)
Translates to: GFWVNNGCVTALKVLLDANLMCN*HSSLYH
Trigger: ATGGTACAGTGAAGAATGCAAATTGCACATCAGATT...AGCATCGAGGAGTACCTTCAGCGCAGTGACACAGCCATTATTTACCCAGAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTTTCTTCTTGCCCATaGGCCTCTGGCGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFSSCP*ASGVPR
Trigger: CCTTGGCACGCCAGAGGCCAATGGGCAAGAAGAAAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCAGGTCATTTTCTTCTaGCCCATTGGCCTCTGGCGT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCQVIFF*PIGLWR
Trigger: ACGCCAGAGGCCAATGGGCAAGAAGAAAATGACCTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGATGGTGTTTATATTaGAAGGCCTTGCCACACTCT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRWCLY*KALPHS
Trigger: AGAGTGTGGCAAGGCCTTCAAATATAAACACCATCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAAACCAATACATTTCTaGCTGCTGATGTGCGAACTG +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRKPIHF*LLMCEL
Trigger: CAGTTCGCACATCAGCAGCAAGAAATGTATTGGTTT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQREPVLI*FLIRPF
Trigger: AAATGGCCGAATGAGAAACAATATCAAGACGGGTTC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGAAGGAGAAGTAACTCCTaGTTCCTCAGGTTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRRRSNS*FLRLRA
Trigger: TGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCT...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGGTAATAAAGAGTCTTTaGTGGGAGGGTTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRVIKSL*WEGYCW
Trigger: CCAACAGTAACCCTCCCACAAAAGACTCTTTATTAC...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCAATTCGTAACACTGTaGTGGAGTTCTGCTATAGAT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGQFVTL*WSSAID
Trigger: ATCTATAGCAGAACTCCACAACAGTGTTACGAATTG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCAGAAGAGAAGCTGTTaGGAGTGTATGAACTACTGT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRQKRSC*ECMNYC
Trigger: ACAGTAGTTCATACACTCCAAACAGCTTCTCTTCTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCTTCTCCGTCCCTCATaGCCTCTAACCATCACTACC +
Preference number: 5 (lower is better)
Translates to: TETYDIAVEQGTLILVLPLLRPS*PLTITT
Trigger: GGTAGTGATGGTTAGAGGCAATGAGGGACGGAGAAG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTTGGAGATGGATATCTTaGGAGCGCCCTCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGWRWIS*ERPQNW
Trigger: CCAGTTCTGAGGGCGCTCCAAAGATATCCATCTCCA...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AAAACAGGCTCCCTAGAAGCTCATCAACTTTACGAAGAAAGCTACTTGCCAAAGAAAATAGTGTCTACCTaGGGAAGCCACGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KTGSLEAHQLYEESYLPKKIVST*GSHGAE
Trigger: CTCAGCACCGTGGCTTCCCAAGGTAGACACTATTTT...CTTTGGCAAGTAGCTTTCTTCGTAAAGTTGATGAGCTTCTAGGGAGCCTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CACAACCTGCCCCAGTGCTTTGAAAGTCAGCAAAACAGGCTCCCTAGAAGCTCATTCAACCTTCACATCTaGGCTAAAAAGCATATTTGG +
Preference number: 5 (lower is better)
Translates to: HNLPQCFESQQNRLPRSSFNLHI*AKKHIW
Trigger: CCAAATATGCTTTTTAGCCAAGATGTGAAGGTTGAA...TGAGCTTCTAGGGAGCCTGTTTTGCTGACTTTCAAAGCACTGGGGCAGGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTACCACAGCCACTCTTaGCCATCCTTTCCTCTGTAC +
Preference number: 5 (lower is better)
Translates to: FEKTAFIQTRNLGDVFLPYHSHS*PSFPLY
Trigger: GTACAGAGGAAAGGATGGCAAAGAGTGGCTGTGGTA...AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGCCTCTGCCAGAAAGTTaGAAGATAGAGCTAAAAACA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGPLPES*KIELKT
Trigger: TGTTTTTAGCTCTATCTTCAAACTTTCTGGCAGAGG...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGGAGGCATAGCATTTaGATGCCACTCCTCCCCCTG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRRHSI*MPLLPL
Trigger: CAGGGGGAGGAGTGGCATCAAAATGCTATGCCTCCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTGCACATTCATTGTTaGTTGGTCCTATCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGLHIHC*LVLSLV
Trigger: CACAAGAGATAGGACCAACAAACAATGAATGTGCAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGGGAGAAAGAGTTAGGTaGCACATTCATTGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGGERVR*HIHCLL
Trigger: CAACAAACAATGAATGTGCAACCTAACTCTTTCTCC...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTTCTTGTTTGCGACCTaGGAGAAGAATCTTAAGACA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGFLFAT*EKNLKT
Trigger: TGTCTTAAGATTCTTCTCCAAGGTCGCAAACAAGAA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGGAAGATGTATGTTTaGTTTAGCTCTTGCGGAGAA +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGRKMYV*FSSCGE
Trigger: TTCTCCGCAAGAGCTAAACAAAACATACATCTTCCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS TCA 90 bp CGGGCCTTCTTCCTAGGATCCCAAGTCCATCTCCATCATAGCCAGTaGGAAATGCTGACTTGCAATAGACTACAAAACCTAGTTTATTTG +
Preference number: 5 (lower is better)
Translates to: RAFFLGSQVHLHHSQ*EMLTCNRLQNLVYL
Trigger: CAAATAAACTAGGTTTTGTAGTCTATTGCAAGTCAGCATTTCTCACTGGCTATGATGGAGATGGACTTGGGATCCTAGGAAGAAGGCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497268.1
CDS CCA 90 bp ATGATCATGTTCCGCTCCAGAACCAAGCACTTAGCTCTTCTTCTCTaGAGGCATGTGAGTCATAAACTGTGTGTTCGTATTTATGTCGCA +
Preference number: 5 (lower is better)
Translates to: MIMFRSRTKHLALLL*RHVSHKLCVRIYVA
Trigger: TGCGACATAAATACGAACACACAGTTTATGACTCACATGCCTCCAGAGAAGAAGAGCTAAGTGCTTGGTTCTGGAGCGGAACATGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639389.1
CDS-3UTR CAA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ESTDDKRRALLSTKTPALFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCTTCCTCTTCCTCTCTaGGCAACAGAGCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLPLPL*ATELGS
Trigger: TGAGCCAAGCTCTGTTGCCAAGAGAGGAAGAGGAAG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCCRISL*CQGCST
Trigger: AGTGGAACACCCCTGGCACAACAACGAGATTCTACA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACT +
Preference number: 5 (lower is better)
Translates to: ESTDDKRRALLSTKTPALCRISL*CQGCST
Trigger: AGTGGAACACCCCTGGCACAACAACGAGATTCTACA...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVACRIS*LCQGCS
Trigger: GGAACACCCCTGGCACAACAACGAGATTCTACAAGC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAATCTGATGTGCAATTaGCATTCTTCACTGTACCAT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGNLMCN*HSSLYH
Trigger: ATGGTACAGTGAAGAATGCAAATTGCACATCAGATT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCACCTAAGTGCTGCATaGGACTCTGAGCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCHLSAA*DSEQMD
Trigger: ATCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGTGGTTCTCAATCATTTaGTCATCAGTGACCAAATCT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGWFSII*SSVTKS
Trigger: AGATTTGGTCACTGATGACAAAATGATTGAGAACCA...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGCTGCAGGACCGCCTaGATCTCTTCATTCATCTTA +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGCRTA*ISSFIL
Trigger: TAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGTCCTTGTATGGGTaGATGGGGCTTGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWSLYG*MGLVIP
Trigger: AGGAATGACAAGCCCCATCAACCCATACAAGGACCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGTTGGGGACTATGTTTTGGTCCTTGTATGGGTaGATGGGGCTTGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: KRRALLSTKTPALLGTMFWSLYG*MGLVIP
Trigger: AGGAATGACAAGCCCCATCAACCCATACAAGGACCA...AAACATAGTCCCCAACAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTACAGACATGTGGTCCTaGTATGGGTTGATGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCTDMWS*YGLMGL
Trigger: AAGCCCCATCAACCCATACAAGGACCACATGTCTGT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CAGTTCATCGGAGTTGGGCTCCATGTTCATAGCATAGTATGCTTTGAGTACAGAATGGGGACCTGGAATTaGAGTACTGGTAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: QFIGVGLHVHSIVCFEYRMGTWN*STGRLF
Trigger: GAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCAT...TCTGTACTCAAAGCATACTATGCTATGAACATGGAGCCCAACTCCGATGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGCAATTCGTAACACTGTaGTGGAGTTCTGCTATAGAT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRQFVTL*WSSAID
Trigger: ATCTATAGCAGAACTCCACAACAGTGTTACGAATTG...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTGCCACTGAAGTTCAGAGACCAAAGGCATTTGTAAAAAGCTCCCCTTCTCCTCTGAGAACATTCAACTaGATCCCTGTTCTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: FATEVQRPKAFVKSSPSPLRTFN*IPVLCH
Trigger: GTGGCAAAGAACAGGGATCAAGTTGAATGTTCTCAG...AGGAGAAGGGGAGCTTTTTACAAATGCCTTTGGTCTCTGAACTTCAGTGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp GAGCATTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTAGGTGGTTTGTCTTaGCGTTTTTCCTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: EHLRRQPSFRHGTWVMFFLGGLS*RFSSWD
Trigger: ATCCCAGGAGGAAAAACGCAAAGACAAACCACCTAA...GAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTTCTTGTTTGCGACCTaGGAGAAGAATCTTAAGACA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRFLFAT*EKNLKT
Trigger: TGTCTTAAGATTCTTCTCCAAGGTCGCAAACAAGAA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGCAGGGGTGTTCAGTaGTTCCAGTGTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGRGVQ*FQCFLI
Trigger: GATGAGGAAACACTGGAACAACTGAACACCCCTGCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGGAAGATGTATGTTTaGTTTAGCTCTTGCGGAGAA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRKMYV*FSSCGE
Trigger: TTCTCCGCAAGAGCTAAACAAAACATACATCTTCCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGATATGCCCCATGGGCAACAGAGACCTACATTGCTTTAAAAGAGGCCACAGGGAGAGAAAGTTTTAGCTaGTGGCATATTCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: RYAPWATETYIALKEATGRESFS*WHIQHH
Trigger: ATGATGCTGAATATGCCACAAGCTAAAACTTTCTCT...CCCTGTGGCCTCTTTTAAAGCAATGTAGGTCTCTGTTGCCCATGGGGCATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS GCA 90 bp TTTGTCACAGTAAGAAGCAATTCCCTGAAATCGGAAGGGAAAACCTaGCGCTTCAATCCGCAGGTCTGTCAGATTGCTAGAAATTACATT +
Preference number: 5 (lower is better)
Translates to: FVTVRSNSLKSEGKT*RFNPQVCQIARNYI
Trigger: AATGTAATTTCTAGCAATCTGACAGACCTGCGGATTGAAGCGGCAGGTTTTCCCTTCCGATTTCAGGGAATTGCTTCTTACTGTGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637045.1
CDS GCA 90 bp GTGCATTTGAACTTGCGATTACCTGCTCCTTGGGTTAGCATTTGGTaGTATAAAAGGAGAAAGACTGACATCAGTTTTGTGCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: VHLNLRLPAPWVSIW*YKRRKTDISFVQEE
Trigger: TTCCTCCTGCACAAAACTGATGTCAGTCTTTCTCCTTTTATAGCACCAAATGCTAACCCAAGGAGCAGGTAATCGCAAGTTCAAATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS-3UTR CAA 90 bp AATGTAAAGTTTAAAATCCTCAGCCCACCCTTAGTCCTGGTGGACTGTCACTCTGTCTTGTTTGTAGTTTaGGCCAGAAATGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NVKFKILSPPLVLVDCHSVLFVV*ARNGEK
Trigger: CTTCTCACCATTTCTGGCCAAAACTACAAACAAGAC...AGAGTGACAGTCCACCAGGACTAAGGGTGGGCTGAGGATTTTAAACTTTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR CAA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVCRISL*CQGCST
Trigger: AGTGGAACACCCCTGGCACAACAACGAGATTCTACA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAATCTGATGTGCAATTaGCATTCTTCACTGTACCAT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRNLMCN*HSSLYH
Trigger: ATGGTACAGTGAAGAATGCAAATTGCACATCAGATT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTCCTCCAGTTTTCTTTaGGCAAAGTATTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRSSSFL*AKYSSK
Trigger: TTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTCTCGTGGCGGTACTaGATGTGCTCCTTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFSWRY*MCSFSD
Trigger: ATCACTGAAGGAGCACATCAAGTACCGCCACGAGAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCTGTGCATTTGAACTaGCGATTACCTGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSVHLN*RLPAPW
Trigger: CCAAGGAGCAGGTAATCGCAAGTTCAAATGCACAGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCACACTCTGTGCATTaGAACTTGCGATTACCTGCT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPHSVH*NLRLPA
Trigger: AGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTT +
Preference number: 5 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVEPVLI*FLIRPF
Trigger: AAATGGCCGAATGAGAAACAATATCAAGACGGGTTC...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGG +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCGEEPV*ILFLIR
Trigger: CCGAATGAGAAACAATATCAAGACGGGTTCTTCCCC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCACCTAAGTGCTGCATaGGACTCTGAGCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVHLSAA*DSEQMD
Trigger: ATCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCCTTGTTCCTCAGGTaGAGAGCATGGATCCTTCAT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSLFLR*RAWILH
Trigger: ATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGGAGAAGTAACTCCTaGTTCCTCAGGTTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRRSNS*FLRLRA
Trigger: TGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGTGGTTCTCAATCATTTaGTCATCAGTGACCAAATCT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRWFSII*SSVTKS
Trigger: AGATTTGGTCACTGATGACAAAATGATTGAGAACCA...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGCTGCAGGACCGCCTaGATCTCTTCATTCATCTTA +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGCRTA*ISSFIL
Trigger: TAAGATGAATGAAGAGATCAAGGCGGTCCTGCAGCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGTCCTTGTATGGGTaGATGGGGCTTGTCATTCCT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWSLYG*MGLVIP
Trigger: AGGAATGACAAGCCCCATCAACCCATACAAGGACCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCACAGACATGTGGTCCTaGTATGGGTTGATGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVTDMWS*YGLMGL
Trigger: AAGCCCCATCAACCCATACAAGGACCACATGTCTGT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGGTAATAAAGAGTCTTTaGTGGGAGGGTTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVVIKSL*WEGYCW
Trigger: CCAACAGTAACCCTCCCACAAAAGACTCTTTATTAC...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCCTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: TETYDIAVEQGTLILVLPLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AAAGTTTACCCTCCCCACAGCCCAAATAGTCATTCAATAGATTTTCCAAGTGGTCTTGATCCCTGTTCTTaGCCACTGAAGTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: KVYPPHSPNSHSIDFPSGLDPCS*PLKFRD
Trigger: GTCTCTGAACTTCAGTGGCAAAGAACAGGGATCAAG...ACCACTTGGAAAATCTATTGAATGACTATTTGGGCTGTGGGGAGGGTAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp GAGCATTTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCCTTAGGGAGAGCTGCTaGATATTGTCTTGTTGGTAT +
Preference number: 5 (lower is better)
Translates to: EHLRRQPSFRHGTWVMFFLRESC*ILSCWY
Trigger: ATACCAACAAGACAATATCAAGCAGCTCTCCCTAAG...GAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAAATGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCTATCTCTTGTGGATaGGGACACAGATATGCCCCA +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPISCG*GHRYAP
Trigger: TGGGGCATATCTGTGTCCCAATCCACAAGAGATAGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTGGAGGGGAATTTCTaGTTTGCGACCTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVEGNF*FATLEK
Trigger: CTTCTCCAAGGTCGCAAACAAGAAATTCCCCTCCAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTTTCCCTAGAGTTAGAGGATTATGCAGCCCTAATGTGCAATCGTGTCCAGCGGAGAGAAAGTTTTAGCTaGTGGCATATTCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: FSLELEDYAALMCNRVQRRESFS*WHIQHH
Trigger: ATGATGCTGAATATGCCACAAGCTAAAACTTTCTCT...CCGCTGGACACGATTGCACATTAGGGCTGCATAATCCTCTAACTCTAGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS GCA 90 bp TGTTTAAAGAGTTTACAAGTCCTTCTGAAAGAAAAACAGAACCGTTaGATATTAATGCCCCCAGGCCCTGGACGATCACACAATGGAAAG +
Preference number: 5 (lower is better)
Translates to: CLKSLQVLLKEKQNR*ILMPPGPGRSHNGK
Trigger: CTTTCCATTGTGTGATCGTCCAGGGCCTGGGGGCATTAATATGCAACGGTTCTGTTTTTCTTTCAGAAGGACTTGTAAACTCTTTAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS-3UTR CAA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LNGSVGYTVLTCLSILREFFLLG*ACLRLL
Trigger: CAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAA...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCTGTGCATTTGAACTaGCGATTACCTGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSVHLN*RLPAPW
Trigger: CCAAGGAGCAGGTAATCGCAAGTTCAAATGCACAGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCCACACTCTGTGCATTaGAACTTGCGATTACCTGCT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVPHSVH*NLRLPA
Trigger: AGCAGGTAATCGCAAGTTCAAATGCACAGAGTGTGG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGGGAAGAACCCGTCTaGATATTGTTTCTCATTCGG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGEEPV*ILFLIR
Trigger: CCGAATGAGAAACAATATCAAGACGGGTTCTTCCCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCCTTGTTCCTCAGGTaGAGAGCATGGATCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSLFLR*RAWILH
Trigger: ATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGGAGAAGTAACTCCTaGTTCCTCAGGTTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRRSNS*FLRLRA
Trigger: TGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTATGGGGACCTGGAATTaGAGTACTGGTAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCMGTWN*STGRLF
Trigger: GAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCAT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TCCGGATTTGATTTTTGCTACAACGTGCATGTCTCTGTGAGATTTTTCAGAGGCAAGCAGTTTCCGGATTaGATTTTTGCTACAACGTGC +
Preference number: 5 (lower is better)
Translates to: SGFDFCYNVHVSVRFFRGKQFPD*IFATTC
Trigger: GCACGTTGTAGCAAAAATCAAATCCGGAAACTGCTT...GCCTCTGAAAAATCTCACAGAGACATGCACGTTGTAGCAAAAATCAAATCCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTAGAGGTGCAATAACTTaGGGAGGAATACTTCACTTG +
Preference number: 5 (lower is better)
Translates to: LRRQPSFRHGTWVMFFFLRGAIT*GGILHL
Trigger: CAAGTGAAGTATTCCTCCCAAAGTTATTGCACCTCT...AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTATGCACATCTCTTGGTaGTGGAGGGGAATTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCMHISW*WRGISC
Trigger: ACAAGAAATTCCCCTCCACAACCAAGAGATGTGCAT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTATACACACACTTGTTaGTGTGTATATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCYTHTC*CVYPGP
Trigger: GGGCCCTGGATATACACACAAACAAGTGTGTGTATA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS GCA 90 bp CTAGCTTCTATACACCCACTCAGTACCGCAACAATTGCAACTGTGTaGCTCTGTTTAAAGAGTTTACAAGTCCTTCTGAAAGAAAAACAG +
Preference number: 5 (lower is better)
Translates to: LASIHPLSTATIATV*LCLKSLQVLLKEKQ
Trigger: CTGTTTTTCTTTCAGAAGGACTTGTAAACTCTTTAAACAGAGGCACACAGTTGCAATTGTTGCGGTACTGAGTGGGTGTATAGAAGCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CCA 90 bp TATAACACTGATCATGAGATTTGGCTTTCAAGCTTTAATAAGTGCTaGGGAGGTGCCTCAGAACTTTCCTTCCGTTTAATTAAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: YNTDHEIWLSSFNKC*GGASELSFRLIKCA
Trigger: GGCACACTTAATTAAACGGAAGGAAAGTTCTGAGGCACCTCCCCAGCACTTATTAAAGCTTGAAAGCCAAATCTCATGATCAGTGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS-3UTR CAA 90 bp ACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCGTCTTGTTTGTAGTTTaGGCCAGAAATGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: TETYDIAVEQGTLILVLPVLFVV*ARNGEK
Trigger: CTTCTCACCATTTCTGGCCAAAACTACAAACAAGAC...GGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465070.5
ENST00000636445.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTTCTTCACTGTACCATaGTTAATTGCGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCFFTVP*LIAVWI
Trigger: GATCCAGACCGCAATTAACAATGGTACAGTGAAGAA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGTCCTCCAGTTTTCTTTaGGCAAAGTATTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVSSSFL*AKYSSK
Trigger: TTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGA...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGATGGTGTTTATATTaGAAGGCCTTGCCACACTCT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRWCLY*KALPHS
Trigger: AGAGTGTGGCAAGGCCTTCAAATATAAACACCATCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAAACCAATACATTTCTaGCTGCTGATGTGCGAACTG +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCKPIHF*LLMCEL
Trigger: CAGTTCGCACATCAGCAGCAAGAAATGTATTGGTTT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCEPVLI*FLIRPF
Trigger: AAATGGCCGAATGAGAAACAATATCAAGACGGGTTC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp ATTAGGAGAAGTAACTCCTTGTTCCTCAGGTTGAGAGCATGGATCCTTCATGTGTGGTTCTCAATCATTTaGTCATCAGTGACCAAATCT +
Preference number: 5 (lower is better)
Translates to: IRRSNSLFLRLRAWILHVWFSII*SSVTKS
Trigger: AGATTTGGTCACTGATGACAAAATGATTGAGAACCA...CACATGAAGGATCCATGCTCTCAACCTGAGGAACAAGGAGTTACTTCTCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCATGGGGACCTGGAATTaGAGTACTGGTAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVMGTWN*STGRLF
Trigger: GAAAAGTCTACCAGTACTCAAATTCCAGGTCCCCAT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTGTAATAAAGAGTCTTTaGTGGGAGGGTTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCVIKSL*WEGYCW
Trigger: CCAACAGTAACCCTCCCACAAAAGACTCTTTATTAC...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCAGAAGAGAAGCTGTTaGGAGTGTATGAACTACTGT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCQKRSC*ECMNYC
Trigger: ACAGTAGTTCATACACTCCAAACAGCTTCTCTTCTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp GAAAGTACAGATGACAAGAGGAGGGCTTTATTATCAACAAAAACTCCGGCTTTGCAGAAGAGAAGCTGTTaGGAGTGTATGAACTACTGT +
Preference number: 5 (lower is better)
Translates to: ESTDDKRRALLSTKTPALQKRSC*ECMNYC
Trigger: ACAGTAGTTCATACACTCCAAACAGCTTCTCTTCTG...CAAAGCCGGAGTTTTTGTTGATAATAAAGCCCTCCTCTTGTCATCTGTACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATAAAAAGGTGTCTGACTaGGCCATTCAGACAATTGCC +
Preference number: 5 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYKKVSD*AIQTIA
Trigger: GGCAATTGTCTGAATGGCCAAGTCAGACACCTTTTT...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp TTGAGAAGACAGCCTTCATTCAGACACGGAACTTGGGTGATGTTTTTCTTCCTTAAATTAATGGGATTCTaGGCATCCTCTCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: LRRQPSFRHGTWVMFFFLKLMGF*ASSLPF
Trigger: AAAAGGGAGAGAGGATGCCAAGAATCCCATTAATTT...AAGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAATGAAGGCTGTCTTCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp GGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGAGCTGCTTGATATTGCTGCTTGATATTGTCTaGTTGGTATTCCTTGGCGTA +
Preference number: 5 (lower is better)
Translates to: GYTVLTCLSILRESCLILLLDIV*LVFLGV
Trigger: TACGCCAAGGAATACCAACAAGACAATATCAAGCAG...CAATATCAAGCAGCTCTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp GGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGAGCTGCTTGATATTGATTCAGACACGGAACTaGGGTGATGTTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GYTVLTCLSILRESCLILIQTRN*GDVFLP
Trigger: AGGAAGAAAAACATCACCCAAGTTCCGTGTCTGAAT...CAATATCAAGCAGCTCTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp GGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGAGCTGCTTGATATTGAGTAATGAGGAGCATTaGAGAAGACAGCCTTCATTC +
Preference number: 5 (lower is better)
Translates to: GYTVLTCLSILRESCLILSNEEH*RRQPSF
Trigger: GAATGAAGGCTGTCTTCTCAAATGCTCCTCATTACT...CAATATCAAGCAGCTCTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGGGGAATTTCTTGTTaGCGACCTTGGAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRGISC*RPWRRI
Trigger: GATTCTTCTCCAAGGTCGCAAACAAGAAATTCCCCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCATGCACATCTCTTGGTaGTGGAGGGGAATTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVMHISW*WRGISC
Trigger: ACAAGAAATTCCCCTCCACAACCAAGAGATGTGCAT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTATACACACACTTGTTaGTGTGTATATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVYTHTC*CVYPGP
Trigger: GGGCCCTGGATATACACACAAACAAGTGTGTGTATA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS GCA 90 bp AGTATGTCTTACATGAGTTCTCGCCACACTCTGTTTCTGTCACACTaGTCCCAAGAATCATTGGCTCTTATTATACATGTAAATGGCTAT +
Preference number: 5 (lower is better)
Translates to: SMSYMSSRHTLFLSH*SQESLALIIHVNGY
Trigger: ATAGCCATTTACATGTATAATAAGAGCCAATGATTCTTGGGAGCAGTGTGACAGAAACAGAGTGTGGCGAGAACTCATGTAAGACATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTCTTGTTTGTAGTTTaGGCCAGAAATGGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVLFVV*ARNGEK
Trigger: CTTCTCACCATTTCTGGCCAAAACTACAAACAAGAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627532.3
ENST00000636471.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTCTTCACTGTACCATaGTTAATTGCGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFFTVP*LIAVWI
Trigger: GATCCAGACCGCAATTAACAATGGTACAGTGAAGAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp TCAACTGGTTTAATATTGGTAAAATGGGAAGGTTTTGTTAGCCTGAGAGGAGGATTCTTCACTGTACCATaGTTAATTGCGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: STGLILVKWEGFVSLRGGFFTVP*LIAVWI
Trigger: GATCCAGACCGCAATTAACAATGGTACAGTGAAGAA...TCCTCCTCTCAGGCTAACAAAACCTTCCCATTTTACCAATATTAAACCAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGATGGTGTTTATATTaGAAGGCCTTGCCACACTCT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRWCLY*KALPHS
Trigger: AGAGTGTGGCAAGGCCTTCAAATATAAACACCATCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAAACCAATACATTTCTaGCTGCTGATGTGCGAACTG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVKPIHF*LLMCEL
Trigger: CAGTTCGCACATCAGCAGCAAGAAATGTATTGGTTT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGAACCCGTCTTGATATaGTTTCTCATTCGGCCATTT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVEPVLI*FLIRPF
Trigger: AAATGGCCGAATGAGAAACAATATCAAGACGGGTTC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGTAATAAAGAGTCTTTaGTGGGAGGGTTACTGTTGG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVVIKSL*WEGYCW
Trigger: CCAACAGTAACCCTCCCACAAAAGACTCTTTATTAC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCAATTCGTAACACTGTaGTGGAGTTCTGCTATAGAT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCQFVTL*WSSAID
Trigger: ATCTATAGCAGAACTCCACAACAGTGTTACGAATTG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCCAGAAGAGAAGCTGTTaGGAGTGTATGAACTACTGT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVQKRSC*ECMNYC
Trigger: ACAGTAGTTCATACACTCCAAACAGCTTCTCTTCTG...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AACACTGAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACTGAGAACATTCAACTaGATCCCTGTTCTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: NTETYDIAVEQGTLILVLLRTFN*IPVLCH
Trigger: GTGGCAAAGAACAGGGATCAAGTTGAATGTTCTCAG...TAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTCAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AATTTCAGACACTTATATCCCAAATTAATGGGATTCTTGGCATCCTCTCTCCCTCTCTATTTAGGTGGTTaGTCTTTGCGTTTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: NFRHLYPKLMGFLASSLPLYLGG*SLRFSS
Trigger: GGAGGAAAAACGCAAAGACAAACCACCTAAATAGAG...AGGGAGAGAGGATGCCAAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTCCTCTGCCAGAAAGTTaGAAGATAGAGCTAAAAACA +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCPLPES*KIELKT
Trigger: TGTTTTTAGCTCTATCTTCAAACTTTCTGGCAGAGG...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTATGCTAGTACATAAATaGTCCACTTTACCACCAGAC +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCMLVHK*STLPPD
Trigger: GTCTGGTGGTAAAGTGGACAATTTATGTACTAGCAT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAATCTGATGTGCAATTaGCATTCTTCACTGTACCAT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCNLMCN*HSSLYH
Trigger: ATGGTACAGTGAAGAATGCAAATTGCACATCAGATT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTCCTCCAGTTTTCTTTaGGCAAAGTATTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCSSSFL*AKYSSK
Trigger: TTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTTGGTTCTCAATCATTTaGTCATCAGTGACCAAATCT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCWFSII*SSVTKS
Trigger: AGATTTGGTCACTGATGACAAAATGATTGAGAACCA...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAATCTGATGTGCAATTaGCATTCTTCACTGGACCAT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVNLMCN*HSSLDH
Trigger: ATGGTCCAGTGAAGAATGCAAATTGCACATCAGATT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638128.1
CDS-3UTR CAA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGGAGAGCTGCTTGATATaGTCTTGTTGGTATTCCTTG +
Preference number: 5 (lower is better)
Translates to: LNGSVGYTVLTCLSILREESCLI*SCWYSL
Trigger: CAAGGAATACCAACAAGACAATATCAAGCAGCTCTC...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTGCACATTCATTGTTaGTTGGTCCTATCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVLHIHC*LVLSLV
Trigger: CACAAGAGATAGGACCAACAAACAATGAATGTGCAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCGGAGAAAGAGTTAGGTaGCACATTCATTGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVGERVR*HIHCLL
Trigger: CAACAAACAATGAATGTGCAACCTAACTCTTTCTCC...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTTCTTGTTTGCGACCTaGGAGAAGAATCTTAAGACA +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVFLFAT*EKNLKT
Trigger: TGTCTTAAGATTCTTCTCCAAGGTCGCAAACAAGAA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp AGCTGTGTTTATTACAATGTGTGGGGCTCCAGATATACACACACTTGTTTGTGTAGAGAAAGTTTTAGCTaGTGGCATATTCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: SCVYYNVWGSRYTHTCLCRESFS*WHIQHH
Trigger: ATGATGCTGAATATGCCACAAGCTAAAACTTTCTCT...ACACAAACAAGTGTGTGTATATCTGGAGCCCCACACATTGTAATAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCATGCTAGTACATAAATaGTCCACTTTACCACCAGAC +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVMLVHK*STLPPD
Trigger: GTCTGGTGGTAAAGTGGACAATTTATGTACTAGCAT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAATCTGATGTGCAATTaGCATTCTTCACTGTACCAT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVNLMCN*HSSLYH
Trigger: ATGGTACAGTGAAGAATGCAAATTGCACATCAGATT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTCCTCCAGTTTTCTTTaGGCAAAGTATTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVSSSFL*AKYSSK
Trigger: TTTTGAGGAATACTTTGCCAAAAGAAAACTGGAGGA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCTGGTTCTCAATCATTTaGTCATCAGTGACCAAATCT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVWFSII*SSVTKS
Trigger: AGATTTGGTCACTGATGACAAAATGATTGAGAACCA...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp GAAACCTATGACATAGCAGTTGAGCAGGGAACTTTAATCTTGGTTTTACCCTATTTCAACCTTCACATCTaGGCTAAAAAGCATATTTGG +
Preference number: 5 (lower is better)
Translates to: ETYDIAVEQGTLILVLPYFNLHI*AKKHIW
Trigger: CCAAATATGCTTTTTAGCCAAGATGTGAAGGTTGAA...ATAGGGTAAAACCAAGATTAAAGTTCCCTGCTCAACTGCTATGTCATAGGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
ENST00000636445.1
CDS-3UTR CAA 90 bp AATTTCAGACACTTATATCCCAAATTAATGGGATTCTTGGCATCCTCTCTCCCTCTTGGCGTAAATGTTTaGAGGAAATTTCAGACACTT +
Preference number: 5 (lower is better)
Translates to: NFRHLYPKLMGFLASSLPLGVNV*RKFQTL
Trigger: AAGTGTCTGAAATTTCCTCAAAACATTTACGCCAAG...AGGGAGAGAGGATGCCAAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS-3UTR CAA 90 bp CTTTCTTCTTTCCAAGGAGAAAGAGTTAGGTTGCACATTCATTGTTTGTTGGTCAGAGAAAGTTTTAGCTaGTGGCATATTCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: LSSFQGERVRLHIHCLLVRESFS*WHIQHH
Trigger: ATGATGCTGAATATGCCACAAGCTAAAACTTTCTCT...GACCAACAAACAATGAATGTGCAACCTAACTCTTTCTCCTTGGAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000627532.3
ENST00000636413.1
ENST00000636471.1
ENST00000637045.1
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
ENST00000638128.1
CDS-3UTR CAA 90 bp TTAAATGGTTCTGTTGGTTATACAGTTTTAACATGCCTCTCTATCCTTAGGGAGTTAAAATCCCAGCACTaGTTAGTAAAGAGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: LNGSVGYTVLTCLSILRELKSQH*LVKRCN
Trigger: ATTGCACCTCTTTACTAACAAGTGCTGGGATTTTAA...CTCCCTAAGGATAGAGAGGCATGTTAAAACTGTATAACCAACAGAACCATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS CCA 90 bp AAAGTTGTGCAGCAAATGAGAAATTATGATATAACTCAAGTGCTATaGCATGAAACCGGCAAAATGAGCCATCTAAACATTTTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: KVVQQMRNYDITQVL*HETGKMSHLNIFQN
Trigger: GTTCTGAAAAATGTTTAGATGGCTCATTTTGCCGGTTTCATGCCATAGCACTTGAGTTATATCATAATTTCTCATTTGCTGCACAACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTGCGAAGTCT +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARSAKS
Trigger: AGACTTCGCAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000303660.8
ENST00000419938.5
ENST00000444559.5
ENST00000453352.5
ENST00000465070.5
ENST00000472146.5
ENST00000539609.7
ENST00000627532.3
ENST00000636026.2
ENST00000636445.1
ENST00000636471.1
ENST00000637267.2
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTCACTCACAC +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARSHSH
Trigger: GTGTGAGTGAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392861.6
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCGTATGAGGGA +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARSYEG
Trigger: TCCCTCATACGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435831.5
ENST00000629955.1
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCCTTTCCTTCG +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARSFPS
Trigger: CGAAGGAAAGGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630572.2
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATTGTTTGGTGTG +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARLFGV
Trigger: CACACCAAACAATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409487.7
ENST00000462355.2
ENST00000484313.3
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTAGCAACCAA +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARSSNQ
Trigger: TTGGTTGCTAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431672.4
ENST00000461784.3
ENST00000558170.6
CDS TCA 72 bp GGGACCTCGGAGGCAGGCAGGAGAGGAGGAGAATCCTaGAAACTCGGTGGAGGTTGGGAAGATGCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: GTSEAGRRGGES*KLGGGWEDAVP
Trigger: AGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCTCCTGCCTGCCTCCGAGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409211.5
ENST00000465308.5
ENST00000636732.2
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATCTAAAAATCGA +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARSKNR
Trigger: TCGATTTTTAGATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409211.5
ENST00000434448.5
ENST00000465308.5
ENST00000636732.2
CDS GCA 72 bp GGTGGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTaGTCATTTCTGACTCCAAGGCGTTTTTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GGKQQQGISRSE*SFLTPRRFSSW
Trigger: CCAGGAGGAAAAACGCCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS GCA 72 bp GCCTGGATAACGGGCTCCTCCAGACCATGTAGAAACTaGCGGGAAAAGTCTCGCTGCGCCCTGCGACTCCTT +
Preference number: 6 (lower is better)
Translates to: AWITGSSRPCRN*REKSRCALRLL
Trigger: AAGGAGTCGCAGGGCGCAGCGAGACTTTTCCCGGCAGTTTCTACATGGTCTGGAGGAGCCCGTTATCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479735.1
CDS CAA 90 bp CACTACATTGTCATAGTTCACCAAATTGTCTTCTCTAGAGGAAAGTaGCTCCAAGTGGGCCCGGGCGGTCCCCGCGAGGCGCGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: HYIVIVHQIVFSRGK*LQVGPGGPREARAG
Trigger: CCCAGCCCGCGCCTCGCGGGGACCGCCCGGGCCCACTTGGAGCAACTTTCCTCTAGAGAAGACAATTTGGTGAACTATGACAATGTAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637304.1
CDS GCA 72 bp GCGGATCAGATGGCAGTTCGCATGGACTCGGCGCCCTaGTTCGGCAGCACGCAGGCTCGATATCTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: ADQMAVRMDSAP*FGSTQARYLQN
Trigger: ATTTTGAAGATATCGAGCCTGCGTGCTGCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427902.5
ENST00000470879.5
CDS GCA 72 bp GGTGGCAAGCAGCAGCAGGGCATCTCCCGCTCCGAGTaGTCATTTCTGACTCCAAGGCTGTGTGGAGATAGT +
Preference number: 6 (lower is better)
Translates to: GGKQQQGISRSE*SFLTPRLCGDS
Trigger: ACTATCTCCACACAGCCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCTGCTTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625161.1
CDS CAA 72 bp GTCATAGTTCACCAAATTGTCTTCTCTAGAGGAAAGTaGCTCCAAGTGGGCCCGGGCGGTCCCCGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: VIVHQIVFSRGK*LQVGPGGPREA
Trigger: CGCCTCGCGGGGACCGCCCGGGCCCACTTGGAGCAACTTTCCTCTAGAGAAGACAATTTGGTGAACTATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637304.1
CDS TCA 72 bp CTTGTTTGCGCCTCTTGCACCGGGGGCCATCCGCCATaGTCGGCTGCTTCATTGATAAGAGCGGATCAGATG +
Preference number: 6 (lower is better)
Translates to: LVCASCTGGHPP*SAASLIRADQM
Trigger: CATCTGATCCGCTCTTATCAATGAAGCAGCCGATCATGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 30 transcripts:
ENST00000303660.8
ENST00000392861.6
ENST00000409211.5
ENST00000409487.7
ENST00000419938.5
ENST00000427902.5
ENST00000431672.4
ENST00000434448.5
ENST00000435831.5
ENST00000444559.5
ENST00000453352.5
ENST00000461784.3
ENST00000462355.2
ENST00000465070.5
ENST00000465308.5
ENST00000470879.5
ENST00000472146.5
ENST00000476394.5
ENST00000484313.3
ENST00000539609.7
ENST00000558170.6
ENST00000627532.3
ENST00000629520.2
ENST00000629955.1
ENST00000630572.2
ENST00000636026.2
ENST00000636445.1
ENST00000636471.1
ENST00000636732.2
ENST00000637267.2
CDS TCA 72 bp CAAAGATCAAGCAGAGCCCAGCCCGCCGAGCGCCATTaGGGGACCAGCGCTCATATGTTGCTGAGTTGCATA +
Preference number: 6 (lower is better)
Translates to: QRSSRAQPAERH*GTSAHMLLSCI
Trigger: TATGCAACTCAGCAACATATGAGCGCTGGTCCCTCAATGGCGCTCGGCGGGCTGGGCTCTGCTTGATCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS CCA 72 bp CTGACAATCTTGATGACCCGTTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGCACCGGGGGCCATCCG +
Preference number: 6 (lower is better)
Translates to: LTILMTRFSSWD*LVCASCTGGHP
Trigger: CGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAACGGGTCATCAAGATTGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434448.5
ENST00000453352.5
CDS CCA 72 bp TCATTTCTGACTCCAAGGCGTTTTTCCTCCTGGGATTaGCTTGTTTGCGCCTCTTGCACCGGGGGCCATCCG +
Preference number: 6 (lower is better)
Translates to: SFLTPRRFSSWD*LVCASCTGGHP
Trigger: CGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAACGCCTTGGAGTCAGAAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS CAA 72 bp CTCATTTCTGACTCCAAGGCGTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTGCACCGGGGGCCATCC +
Preference number: 6 (lower is better)
Translates to: LISDSKAFFLLG*ACLRLLHRGPS
Trigger: GGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAACGCCTTGGAGTCAGAAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000462355.2
ENST00000465070.5
ENST00000470879.5
ENST00000629520.2
CDS CAA 72 bp TCAAAGATCAAGCAGAGCCCAGCCCGCCGAGCGCCATaGAGGGACCAGCGCTCATATGTTGCTGAGTTGCAT +
Preference number: 6 (lower is better)
Translates to: SKIKQSPARRAP*RDQRSYVAELH
Trigger: ATGCAACTCAGCAACATATGAGCGCTGGTCCCTCAATGGCGCTCGGCGGGCTGGGCTCTGCTTGATCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS CAA 90 bp GGAGGCAGGCAGGAGAGGAGGAGAATCCTGAAAACTCGGTGGAGGTaGGGAAGATGCTGTGCCTCGAGGATTAGTTTAAACAGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: GGRQERRRILKTRWR*GRCCASRISLNRGL
Trigger: CAGCCCCCTGTTTAAACTAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCTCCTGCCTGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465308.5
CDS TCA 72 bp ATGAGGGAATGCACACGGCGGTACAGTAAGACCGCTTaGCTCAGGGCTAGGCGGACCCTTTCCTTCGAAAAG +
Preference number: 6 (lower is better)
Translates to: MRECTRRYSKTA*LRARRTLSFEK
Trigger: CTTTTCGAAGGAAAGGGTCCGCCTAGCCCTGAGTCAAGCGGTCTTACTGTACCGCCGTGTGCATTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409487.7
ENST00000435831.5
ENST00000629955.1
CDS GCA 72 bp GCTTCGGCAGCACGCAGGCTCGATTGTTTGGTGTGTTaGACCCGCGAGGGGATCAGAGAGACAAGAATTACA +
Preference number: 6 (lower is better)
Translates to: ASAARRLDCLVC*TREGIRETRIT
Trigger: TGTAATTCTTGTCTCTCTGATCCCCTCGCGGGTGCAACACACCAAACAATCGAGCCTGCGTGCTGCCGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409487.7
ENST00000462355.2
CDS CCA 72 bp GGCAGGCAGGAGAGGAGGAGAATCCTGAAAACTCGGTaGAGGTTGGGAAGATGCTGTGCCTCGAGGATTAGT +
Preference number: 6 (lower is better)
Translates to: GRQERRRILKTR*RLGRCCASRIS
Trigger: ACTAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCTCCTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409211.5
ENST00000465308.5
CDS CAA 72 bp TCTGACAATCTTGATGACCCGTTTTTCCTCCTGGGATaGGCTTGTTTGCGCCTCTTGCACCGGGGGCCATCC +
Preference number: 6 (lower is better)
Translates to: SDNLDDPFFLLG*ACLRLLHRGPS
Trigger: GGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAACGGGTCATCAAGATTGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434448.5
ENST00000453352.5
CDS CAA 72 bp AGACCATGTAGAAACGTTTTTCCTCCTGGGATTGGCTaGTTTGCGCCTCTTGCACCGGGGGCCATCCGCCAT +
Preference number: 6 (lower is better)
Translates to: RPCRNVFPPGIG*FAPLAPGAIRH
Trigger: ATGGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTTTCTACATGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636445.1
CDS CAA 90 bp GGAGGCAGGCAGGAGAGGAGGAGAATCCTGAAAACTCGGTGGAGGTaGGGAAGATGCTGTGCCTCGAGGATTAGTTTAAACAGGGGGCTA +
Preference number: 6 (lower is better)
Translates to: GGRQERRRILKTRWR*GRCCASRISLNRGL
Trigger: TAGCCCCCTGTTTAAACTAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCTCCTCTCCTGCCTGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409211.5
CDS TCA 72 bp AGCAGCAGGGCATCTCCCGCTCCGAGTGCTCATTTCTaGCTCCAAGGCTGTGTGGAGATAGTGGGGTATAAT +
Preference number: 6 (lower is better)
Translates to: SSRASPAPSAHF*LQGCVEIVGYN
Trigger: ATTATACCCCACTATCTCCACACAGCCTTGGAGTCAGAAATGAGCACTCGGAGCGGGAGATGCCCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625161.1
CDS GCA 72 bp TTCGGCAGCACGCAGGCTCGATCTCACTCACACACATaGTCCCCCACACTGGTTCCCTTAAATAGTTCCAGT +
Preference number: 6 (lower is better)
Translates to: FGSTQARSHSHT*SPTLVPLNSSS
Trigger: ACTGGAACTATTTAAGGGAACCAGTGTGGGGGAGCATGTGTGTGAGTGAGATCGAGCCTGCGTGCTGCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392861.6
CDS CAA 72 bp AGGTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: RSGPSTEACRIS*LCQGCSTPPSL
Trigger: AAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419938.5
CDS CAA 90 bp GGTGGCAGGTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: GGRSGPSTEACRISL*CQGCSTPPSLISSS
Trigger: GGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGACCTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419938.5
CDS CAA 90 bp CCAGGTGGCAGGTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: PGGRSGPSTEACRIS*LCQGCSTPPSLISS
Trigger: AGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGACCTGCCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419938.5
CDS CAA 90 bp CAGCAACCTTCAAAGATCAAGCAGAGCCCAGCCCGCCGAGCGCCATaGAGGGACCAGCGCTCATATGTTGCTGAGTTGCATAAACAAACA +
Preference number: 6 (lower is better)
Translates to: QQPSKIKQSPARRAP*RDQRSYVAELHKQT
Trigger: TGTTTGTTTATGCAACTCAGCAACATATGAGCGCTGGTCCCTCAATGGCGCTCGGCGGGCTGGGCTCTGCTTGATCTTTGAAGGTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS TCA 72 bp ACTGCAGTGTGCGGCGGTCCCAGTCATGATCTTCCCTaGCGCATTTCATTTTTCACCTCCACCTACCATAGG +
Preference number: 6 (lower is better)
Translates to: TAVCGGPSHDLP*RISFFTSTYHR
Trigger: CCTATGGTAGGTGGAGGTGAAAAATGAAATGCGTCAGGGAAGATCATGACTGGGACCGCCGCACACTGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636820.1
CDS GCA 72 bp CTGAGGTTGCCTTTGATAGCACTCACAGCACGGAAGTaGCACTCACGGGTACTTAGAGCTGCGTCATTTAGG +
Preference number: 6 (lower is better)
Translates to: LRLPLIALTARK*HSRVLRAASFR
Trigger: CCTAAATGACGCAGCTCTAAGTACCCGTGAGTGGCACTTCCGTGCTGTGAGTGCTATCAAAGGCAACCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 72 bp TTCACTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: FTGPSTEACRIS*LCQGCSTPPSL
Trigger: AAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409211.5
ENST00000431672.4
ENST00000440875.6
ENST00000539609.7
ENST00000638128.1
CDS CAA 72 bp CCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATT +
Preference number: 6 (lower is better)
Translates to: PGPSTEACRISL*CQGCSTPPSLI
Trigger: AATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461784.3
ENST00000472146.5
ENST00000476394.5
CDS CAA 72 bp TTACCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: LPGPSTEACRIS*LCQGCSTPPSL
Trigger: AAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461784.3
ENST00000472146.5
ENST00000476394.5
CDS CAA 72 bp ACAGCGAGAGCCGCACCATTCATCCATCCCACAGAGTaGTCTACATGCCAGGCCCATTGCATCATTGTCAGT +
Preference number: 6 (lower is better)
Translates to: TARAAPFIHPTE*STCQAHCIIVS
Trigger: ACTGACAATGATGCAATGGGCCTGGCATGTAGACAACTCTGTGGGATGGATGAATGGTGCGGCTCTCGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 72 bp GATTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: DSGPSTEACRIS*LCQGCSTPPSL
Trigger: AAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS CAA 90 bp ACAAACAACGCGAAACAGCCCCTGGATGAAGCACACTCGGGCAAATaGATAATAGTAATTATAGGAAGCCCACTCGCCCAGCGCCCCCTC +
Preference number: 6 (lower is better)
Translates to: TNNAKQPLDEAHSGK*IIVIIGSPLAQRPL
Trigger: GAGGGGGCGCTGGGCGAGTGGGCTTCCTATAATTACTATTATCAATTTGCCCGAGTGTGCTTCATCCAGGGGCTGTTTCGCGTTGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000629955.1
ENST00000630572.2
CDS CAA 90 bp ACCGGAGGGACAGCGAGAGCCGCACCATTCATCCATCCCACAGAGTaGTCTACATGCCAGGCCCATTGCATCATTGTCAGTTTTATTCTA +
Preference number: 6 (lower is better)
Translates to: TGGTARAAPFIHPTE*STCQAHCIIVSFIL
Trigger: TAGAATAAAACTGACAATGATGCAATGGGCCTGGCATGTAGACAACTCTGTGGGATGGATGAATGGTGCGGCTCTCGCTGTCCCTCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS TCA 72 bp TTGAAGCGCCCTGAGCGTGAGCATCATGTGAAAACGTaGTCGCCAAGTTTCTCTCTGGGAAAGGATCTGGGA +
Preference number: 6 (lower is better)
Translates to: LKRPEREHHVKT*SPSFSLGKDLG
Trigger: TCCCAGATCCTTTCCCAGAGAGAAACTTGGCGATCACGTTTTCACATGATGCTCACGCTCAGGGCGCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465308.5
ENST00000636026.2
ENST00000636471.1
ENST00000675069.1
CDS GCA 72 bp AGGAGAATCCTGAAAACTCGGTGGAGGTTGGGAAGATaGTGTGCCTCGAGGATTAGTTTAAACAGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: RRILKTRWRLGR*CASRISLNRGL
Trigger: CAGCCCCCTGTTTAAACTAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465308.5
CDS CAA 72 bp ATTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: ISGPSTEACRIS*LCQGCSTPPSL
Trigger: AAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303660.8
CDS CAA 72 bp ACTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATT +
Preference number: 6 (lower is better)
Translates to: TGPSTEACRISL*CQGCSTPPSLI
Trigger: AATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409211.5
ENST00000431672.4
ENST00000440875.6
ENST00000539609.7
ENST00000638128.1
CDS CAA 72 bp ATTGTCATAGTTCACCAAAGAACCGGCGGGCTGCTTTaGCAGCCCTCAGTCCCAGCAATGCTCAGTAGCTTT +
Preference number: 6 (lower is better)
Translates to: IVIVHQRTGGLL*QPSVPAMLSSF
Trigger: AAAGCTACTGAGCATTGCTGGGACTGAGGGCTGCAAAAGCAGCCCGCCGGTTCTTTGGTGAACTATGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638007.1
CDS CAA 90 bp GCATTCTTCACTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: AFFTGPSTEACRISL*CQGCSTPPSLISSS
Trigger: GGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGTGAAGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409211.5
ENST00000431672.4
ENST00000440875.6
ENST00000539609.7
ENST00000638128.1
CDS CAA 90 bp AGACACTTACCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: RHLPGPSTEACRISL*CQGCSTPPSLISSS
Trigger: GGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGGTAAGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461784.3
ENST00000472146.5
ENST00000476394.5
CDS TCA 72 bp GCCCTGGCACTGCCTCTGCCAGGCATCTTGCTAGCCTaGGAATCTGGAAGGTTGTATTTCAGATACTTGTTT +
Preference number: 6 (lower is better)
Translates to: ALALPLPGILLA*ESGRLYFRYLF
Trigger: AAACAAGTATCTGAAATACAACCTTCCAGATTCTCAGGCTAGCAAGATGCCTGGCAGAGGCAGTGCCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625161.1
CDS TCA 72 bp AGTCAGGCGACTGAGGATCATCTGACTGAACTTTCTTaGAACCGACACACATTCTTGTCTGCGGGCAACTCG +
Preference number: 6 (lower is better)
Translates to: SQATEDHLTELS*NRHTFLSAGNS
Trigger: CGAGTTGCCCGCAGACAAGAATGTGTGTCGGTTTCAAGAAAGTTCAGTCAGATGATCCTCAGTCGCCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625161.1
CDS GCA 72 bp AGGAGAATCCTGAAAACTCGGTGGAGGTTGGGAAGATaGTGTGCCTCGAGGATTAGTTTAAACAGGGGGCTA +
Preference number: 6 (lower is better)
Translates to: RRILKTRWRLGR*CASRISLNRGL
Trigger: TAGCCCCCTGTTTAAACTAATCCTCGAGGCACAGCATCTTCCCAACCTCCACCGAGTTTTCAGGATTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409211.5
CDS CAA 72 bp GCGAAACAGCCCCTGGATGAAGCACACTCGGGCAAATaGATAATAGTAATTATAGGAAGCCCACTCGCCCAG +
Preference number: 6 (lower is better)
Translates to: AKQPLDEAHSGK*IIVIIGSPLAQ
Trigger: CTGGGCGAGTGGGCTTCCTATAATTACTATTATCAATTTGCCCGAGTGTGCTTCATCCAGGGGCTGTTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000629955.1
ENST00000630572.2
CDS CAA 90 bp TCCTTCATTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: SFISGPSTEACRISL*CQGCSTPPSLISSS
Trigger: GGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAATGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303660.8
CDS CAA 90 bp AAGGAAGATTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTTGTaGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCTTCC +
Preference number: 6 (lower is better)
Translates to: KEDSGPSTEACRISL*CQGCSTPPSLISSS
Trigger: GGAAGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAATCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS TCA 72 bp TGGAAAGAGGAAAGACATGTCACTTCCATCGATATGTaGCCTTGTCCAACTGCTGCAGTCTGTGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: WKEERHVTSIDM*PCPTAAVCGFS
Trigger: GGAGAAGCCACAGACTGCAGCAGTTGGACAAGGTCACATATCGATGGAAGTGACATGTCTTTCCTCTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS GCA 72 bp GTAAGAAGCAATTCCCTGAAATCGGAAGGGAAAACCTaGCGCTTCAATCCGCAGGTCTGTCAGATTGCTAGA +
Preference number: 6 (lower is better)
Translates to: VRSNSLKSEGKT*RFNPQVCQIAR
Trigger: TCTAGCAATCTGACAGACCTGCGGATTGAAGCGGCAGGTTTTCCCTTCCGATTTCAGGGAATTGCTTCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637045.1
CDS CAA 72 bp AGAGGAAAGACATGTCACTTCCATCGATATGTGACCTaGTCCAACTGCTGCAGTCTGTGGCTTCTCCACCAA +
Preference number: 6 (lower is better)
Translates to: RGKTCHFHRYVT*SNCCSLWLLHQ
Trigger: TTGGTGGAGAAGCCACAGACTGCAGCAGTTGGACAAGGTCACATATCGATGGAAGTGACATGTCTTTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 90 bp TCTTCCTTCATTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: SSFISGPSTEACRIS*LCQGCSTPPSLISS
Trigger: AGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAATGAAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303660.8
CDS CAA 90 bp TCCTTCATTTCTTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: SFISSGPSTEACRIS*LCQGCSTPPSLISS
Trigger: AGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAAGAAATGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000392861.6
ENST00000409487.7
ENST00000427902.5
ENST00000465308.5
ENST00000558170.6
ENST00000627532.3
ENST00000636026.2
ENST00000636179.1
ENST00000636413.1
ENST00000636471.1
ENST00000636820.1
ENST00000637045.1
ENST00000637267.2
ENST00000637304.1
ENST00000638007.1
ENST00000638087.1
CDS CAA 90 bp TTTGCATTCTTCACTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: FAFFTGPSTEACRIS*LCQGCSTPPSLISS
Trigger: AGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGTGAAGAATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409211.5
ENST00000431672.4
ENST00000440875.6
ENST00000539609.7
ENST00000638128.1
CDS CAA 90 bp TTTAGACACTTACCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: FRHLPGPSTEACRIS*LCQGCSTPPSLISS
Trigger: AGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGGTAAGTGTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461784.3
ENST00000472146.5
ENST00000476394.5
CDS CAA 90 bp TCATCCATCCCACAGAGTTGTCTACATGCCAGGCCCATTGCATCATaGTCAGTTTTATTCTATCTGCAACTGGACAAGGCTGCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: SSIPQSCLHARPIAS*SVLFYLQLDKAAAL
Trigger: TAGGGCTGCAGCCTTGTCCAGTTGCAGATAGAATAAAACTGACAATGATGCAATGGGCCTGGCATGTAGACAACTCTGTGGGATGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 90 bp CGCACCATTCATCCATCCCACAGAGTTGTCTACATGCCAGGCCCATaGCATCATTGTCAGTTTTATTCTATCTGCAACTGGACAAGGCTG +
Preference number: 6 (lower is better)
Translates to: RTIHPSHRVVYMPGP*HHCQFYSICNWTRL
Trigger: CAGCCTTGTCCAGTTGCAGATAGAATAAAACTGACAATGATGCAATGGGCCTGGCATGTAGACAACTCTGTGGGATGGATGAATGGTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 90 bp AACAAGGAAGATTCTGGACCATCTACAGAGGCTTGTAGAATCTCGTaGTTGTGCCAGGGGTGTTCCACTCCACCCTCCCTTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: NKEDSGPSTEACRIS*LCQGCSTPPSLISS
Trigger: AGATGAAATAAGGGAGGGTGGAGTGGAACACCCCTGGCACAACAACGAGATTCTACAAGCCTCTGTAGATGGTCCAGAATCTTCCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636732.2
CDS TCA 72 bp CCCAATAGGGTAGCAACTGCCACGGTAAACAATTTGTaGAAAAGCCCTTCTGAGCAGTTGGACTATGGTCAG +
Preference number: 6 (lower is better)
Translates to: PNRVATATVNNL*KSPSEQLDYGQ
Trigger: CTGACCATAGTCCAACTGCTCAGAAGGGCTTTTTCACAAATTGTTTACCGTGGCAGTTGCTACCCTATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS TCA 72 bp ATAAGGTCTGTGAACTCAATTGAAGGTGGCTGTTTCTaGATTAGTCAGCCCTCACAGGCTCTCGGCCTACAT +
Preference number: 6 (lower is better)
Translates to: IRSVNSIEGGCF*ISQPSQALGLH
Trigger: ATGTAGGCCGAGAGCCTGTGAGGGCTGACTAATTCAGAAACAGCCACCTTCAATTGAGTTCACAGACCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638007.1
ENST00000638087.1
CDS GCA 72 bp ATTGTCAGTTTTATTCTATCTGCAACTGGACAAGGCTaGAGCCCTAGCTTCTATACACCCACTCAGTACCGC +
Preference number: 6 (lower is better)
Translates to: IVSFILSATGQG*SPSFYTPTQYR
Trigger: GCGGTACTGAGTGGGTGTATAGAAGCTAGGGCTGCAGCCTTGTCCAGTTGCAGATAGAATAAAACTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS GCA 72 bp GCCGCACCATTCATCCATCCCACAGAGTTGTCTACATaGCAGGCCCATTGCATCATTGTCAGTTTTATTCTA +
Preference number: 6 (lower is better)
Translates to: AAPFIHPTELST*QAHCIIVSFIL
Trigger: TAGAATAAAACTGACAATGATGCAATGGGCCTGGCATGTAGACAACTCTGTGGGATGGATGAATGGTGCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CCA 72 bp TGTACCATTGTTAATTGCGGTCTGGATCGTGGCTTCTaGCCCCATAGTGTCATAGTCTTCCTTCATTTCTGG +
Preference number: 6 (lower is better)
Translates to: CTIVNCGLDRGF*PHSVIVFLHFW
Trigger: CCAGAAATGAAGGAAGACTATGACACTATGGGGCCAGAAGCCACGATCCAGACCGCAATTAACAATGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303660.8
CDS GCA 72 bp ACATGTCACTTCCATCGATATGTGACCTTGTCCAACTaGTGCAGTCTGTGGCTTCTCCACCAAGGTTTAAAA +
Preference number: 6 (lower is better)
Translates to: TCHFHRYVTLSN*CSLWLLHQGLK
Trigger: TTTTAAACCTTGGTGGAGAAGCCACAGACTGCAGCAGTTGGACAAGGTCACATATCGATGGAAGTGACATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS GCA 72 bp AGTTTACAAGTCCTTCTGAAAGAAAAACAGAACCGTTaGATATTAATGCCCCCAGGCCCTGGACGATCACAC +
Preference number: 6 (lower is better)
Translates to: SLQVLLKEKQNR*ILMPPGPGRSH
Trigger: GTGTGATCGTCCAGGGCCTGGGGGCATTAATATGCAACGGTTCTGTTTTTCTTTCAGAAGGACTTGTAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CCA 72 bp AGTTTCTGGCCTGCCAATTTCAACTTGAAGCTTGACTaGGCTGATTTGATGCAAATACCTCCAGGGAAAACC +
Preference number: 6 (lower is better)
Translates to: SFWPANFNLKLD*ADLMQIPPGKT
Trigger: GGTTTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS CCA 72 bp AAACGTGATCGCCAAGTTTCTCTCTGGGAAAGGATCTaGGATAGATTATACCTTGAAGTCTCCGCAAACGCT +
Preference number: 6 (lower is better)
Translates to: KRDRQVSLWERI*DRLYLEVSANA
Trigger: AGCGTTTGCGGAGACTTCAAGGTATAATCTATCCCAGATCCTTTCCCAGAGAGAAACTTGGCGATCACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636026.2
ENST00000675069.1
CDS CAA 72 bp CCACAGAGTTGTCTACATGCCAGGCCCATTGCATCATaGTCAGTTTTATTCTATCTGCAACTGGACAAGGCT +
Preference number: 6 (lower is better)
Translates to: PQSCLHARPIAS*SVLFYLQLDKA
Trigger: AGCCTTGTCCAGTTGCAGATAGAATAAAACTGACAATGATGCAATGGGCCTGGCATGTAGACAACTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 72 bp CCTGCCAATTTCAACTTGAAGCTTGACTGGGCTGATTaGATGCAAATACCTCCAGGGAAAACCCTGAAACTG +
Preference number: 6 (lower is better)
Translates to: PANFNLKLDWAD*MQIPPGKTLKL
Trigger: CAGTTTCAGGGTTTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS CAA 72 bp CTCTACCCTGTGAGTTTCTGGCCTGCCAATTTCAACTaGAAGCTTGACTGGGCTGATTTGATGCAAATACCT +
Preference number: 6 (lower is better)
Translates to: LYPVSFWPANFN*KLDWADLMQIP
Trigger: AGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACTCACAGGGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS CAA 90 bp ATTGTGGGACGAAAGAATGTCAAGGACAATTCCAAACACAAAACTTaGATTGTGCTGGAACCGGAAAGGCACAGTAAGAACTCCACTGCG +
Preference number: 6 (lower is better)
Translates to: IVGRKNVKDNSKHKT*IVLEPERHSKNSTA
Trigger: CGCAGTGGAGTTCTTACTGTGCCTTTCCGGTTCCAGCACAATCAAAGTTTTGTGTTTGGAATTGTCCTTGACATTCTTTCGTCCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS CAA 90 bp ACAATGGAAAGAGGAAAGACATGTCACTTCCATCGATATGTGACCTaGTCCAACTGCTGCAGTCTGTGGCTTCTCCACCAAGGTTTAAAA +
Preference number: 6 (lower is better)
Translates to: TMERGKTCHFHRYVT*SNCCSLWLLHQGLK
Trigger: TTTTAAACCTTGGTGGAGAAGCCACAGACTGCAGCAGTTGGACAAGGTCACATATCGATGGAAGTGACATGTCTTTCCTCTTTCCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 90 bp AGTTTCTGGCCTGCCAATTTCAACTTGAAGCTTGACTGGGCTGATTaGATGCAAATACCTCCAGGGAAAACCCTGAAACTGATGAACAGT +
Preference number: 6 (lower is better)
Translates to: SFWPANFNLKLDWAD*MQIPPGKTLKLMNS
Trigger: ACTGTTCATCAGTTTCAGGGTTTTCCCTGGAGGTATTTGCATCAAATCAGCCCAGTCAAGCTTCAAGTTGAAATTGGCAGGCCAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS TCA 72 bp AACTGCCACGGTAAACAATTTGTGAAAAAGCCCTTCTaGGCAGTTGGACTATGGTCAGAAGTAACCCCCAAA +
Preference number: 6 (lower is better)
Translates to: NCHGKQFVKKPF*AVGLWSEVTPK
Trigger: TTTGGGGGTTACTTCTGACCATAGTCCAACTGCTCAGAAGGGCTTTTTCACAAATTGTTTACCGTGGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 72 bp ACCCTGAAACTGATGAACAGTTATGTCAAGTCGATTTaGCACCATCGGGAAAAGGTAACCTCGTTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: TLKLMNSYVKSI*HHREKVTSFFL
Trigger: GAGGAAAAACGAGGTTACCTTTTCCCGATGGTGCAAAATCGACTTGACATAACTGTTCATCAGTTTCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629955.1
CDS GCA 72 bp TACATGAGTTCTCGCCACACTCTGTTTCTGTCACACTaGTCCCAAGAATCATTGGCTCTTATTATACATGTA +
Preference number: 6 (lower is better)
Translates to: YMSSRHTLFLSH*SQESLALIIHV
Trigger: TACATGTATAATAAGAGCCAATGATTCTTGGGAGCAGTGTGACAGAAACAGAGTGTGGCGAGAACTCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS GCA 72 bp ATACACCCACTCAGTACCGCAACAATTGCAACTGTGTaGCTCTGTTTAAAGAGTTTACAAGTCCTTCTGAAA +
Preference number: 6 (lower is better)
Translates to: IHPLSTATIATV*LCLKSLQVLLK
Trigger: TTTCAGAAGGACTTGTAAACTCTTTAAACAGAGGCACACAGTTGCAATTGTTGCGGTACTGAGTGGGTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS GCA 72 bp AACTTGCGATTACCTGCTCCTTGGGTTAGCATTTGGTaGTATAAAAGGAGAAAGACTGACATCAGTTTTGTG +
Preference number: 6 (lower is better)
Translates to: NLRLPAPWVSIW*YKRRKTDISFV
Trigger: CACAAAACTGATGTCAGTCTTTCTCCTTTTATAGCACCAAATGCTAACCCAAGGAGCAGGTAATCGCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS CAA 72 bp CGAAAGAATGTCAAGGACAATTCCAAACACAAAACTTaGATTGTGCTGGAACCGGAAAGGCACAGTAAGAAC +
Preference number: 6 (lower is better)
Translates to: RKNVKDNSKHKT*IVLEPERHSKN
Trigger: GTTCTTACTGTGCCTTTCCGGTTCCAGCACAATCAAAGTTTTGTGTTTGGAATTGTCCTTGACATTCTTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS CAA 90 bp TGTGTGGGATTGCTGAGATTCGAGAAACCTTCACCGAAAGCAAAATaGGAAACGGAAAGAGTAGAAAACTTGGCACAGTATGTTAGGAAA +
Preference number: 6 (lower is better)
Translates to: CVGLLRFEKPSPKAK*ETERVENLAQYVRK
Trigger: TTTCCTAACATACTGTGCCAAGTTTTCTACTCTTTCCGTTTCCAATTTTGCTTTCGGTGAAGGTTTCTCGAATCTCAGCAATCCCACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS CAA 90 bp CTTATACAGATATCTCTAATGACCAGATTTGAGATGCACATCAAATaGTGTAGGTATCTCAGTACAGCTTCTGGAACAAAGTTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: LIQISLMTRFEMHIK*CRYLSTASGTKFSA
Trigger: GGCAGAGAACTTTGTTCCAGAAGCTGTACTGAGATACCTACACAATTTGATGTGCATCTCAAATCTGGTCATTAGAGATATCTGTATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637267.2
CDS CAA 72 bp TTTTGGCAAAGTATTCCTCAAAATCTGATGTGCAATTaGCATTCTTCACTGGACCATCTACAGAGGCTTGTA +
Preference number: 6 (lower is better)
Translates to: FWQSIPQNLMCN*HSSLDHLQRLV
Trigger: TACAAGCCTCTGTAGATGGTCCAGTGAAGAATGCAAATTGCACATCAGATTTTGAGGAATACTTTGCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431672.4
ENST00000440875.6
ENST00000539609.7
ENST00000638128.1
CDS CAA 90 bp ACCTTAAGGCTTAATGGATATAACGATAAATGTTTATGTGTGGGATaGCTGAGATTCGAGAAACCTTCACCGAAAGCAAAATTGGAAACG +
Preference number: 6 (lower is better)
Translates to: TLRLNGYNDKCLCVG*LRFEKPSPKAKLET
Trigger: CGTTTCCAATTTTGCTTTCGGTGAAGGTTTCTCGAATCTCAGCAATCCCACACATAAACATTTATCGTTATATCCATTAAGCCTTAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS TCA 72 bp ACATTCACACTTAACAAAAGGGAATCATTAAACGATTaGATTCCAATAGGAGGTGTCAGACAGACACTGAAG +
Preference number: 6 (lower is better)
Translates to: TFTLNKRESLND*IPIGGVRQTLK
Trigger: CTTCAGTGTCTGTCTGACACCTCCTATTGGAATTCAATCGTTTAATGATTCCCTTTTGTTAAGTGTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS TCA 72 bp TTAGTTATAACCCTTTTTATCCAAAGACTGTGCAACTaGGATCTTTCAGAGACATTGGATGAGATGGTGTCA +
Preference number: 6 (lower is better)
Translates to: LVITLFIQRLCN*DLSETLDEMVS
Trigger: TGACACCATCTCATCCAATGTCTCTGAAAGATCTCAGTTGCACAGTCTTTGGATAAAAAGGGTTATAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS TCA 72 bp CCTATTCTCCGTCACATTGGCTATTTAAGCAAATATTaGAGCTTTCTTGGCACCTGGTTATCTCATTTAAAC +
Preference number: 6 (lower is better)
Translates to: PILRHIGYLSKY*SFLGTWLSHLN
Trigger: GTTTAAATGAGATAACCAGGTGCCAAGAAAGCTTCAATATTTGCTTAAATAGCCAATGTGACGGAGAATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 72 bp ACACAAAAAGCTGCCACAATCACAAACTACTACAGCTaGACATTGCTGTTTGGCTGTTTTTCAACTATTGAT +
Preference number: 6 (lower is better)
Translates to: TQKAATITNYYS*TLLFGCFSTID
Trigger: ATCAATAGTTGAAAAACAGCCAAACAGCAATGTCAAGCTGTAGTAGTTTGTGATTGTGGCAGCTTTTTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS CAA 72 bp AATTTCAGACACTTATATCCCAAATTAATGGGATTCTaGGCATCCTCTCTCCCTTTTAATGTTGCACTGATG +
Preference number: 6 (lower is better)
Translates to: NFRHLYPKLMGF*ASSLPFNVALM
Trigger: CATCAGTGCAACATTAAAAGGGAGAGAGGATGCCAAGAATCCCATTAATTTGGGATATAAGTGTCTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484313.3
CDS CAA 72 bp AGATTTGATTCATTATCAAACGTAAGAGACAACATCTaGGGTTATAGCTGCTTGAGCAGTTTTATCACAGGC +
Preference number: 6 (lower is better)
Translates to: RFDSLSNVRDNI*GYSCLSSFITG
Trigger: GCCTGTGATAAAACTGCTCAAGCAGCTATAACCCAAGATGTTGTCTCTTACGTTTGATAATGAATCAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675145.1
CDS CAA 90 bp CGCAATGTGATAACATTACTATCACTTCATAATCTGTCACCAGCTTaGGTATCTCTATTCTGCAAGGGCTCAATGGAAAGAAATATTTTA +
Preference number: 6 (lower is better)
Translates to: RNVITLLSLHNLSPA*VSLFCKGSMERNIL
Trigger: TAAAATATTTCTTTCCATTGAGCCCTTGCAGAATAGAGATACCAAAGCTGGTGACAGATTATGAAGTGATAGTAATGTTATCACATTGCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461784.3
ENST00000472146.5
CDS CCA 72 bp TTTGGACAGCCTGTGAAGGATGTAACGAGATCTAATTaGGAATATAACATGTATGTTTCAAAACTAATAGCC +
Preference number: 6 (lower is better)
Translates to: FGQPVKDVTRSN*EYNMYVSKLIA
Trigger: GGCTATTAGTTTTGAAACATACATGTTATATTCCCAATTAGATCTCGTTACATCCTTCACAGGCTGTCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628473.1
CDS CAA 72 bp CTTAATGGATATAACGATAAATGTTTATGTGTGGGATaGCTGAGATTCGAGAAACCTTCACCGAAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: LNGYNDKCLCVG*LRFEKPSPKAK
Trigger: TTTTGCTTTCGGTGAAGGTTTCTCGAATCTCAGCAATCCCACACATAAACATTTATCGTTATATCCATTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472146.5
CDS TCA 72 bp ATTGTAAATGTGGTGCAAATACCTCATGTTATGTGTTaGAAGTGTGGTTCATGTTTGACTTGCATCAAAACT +
Preference number: 6 (lower is better)
Translates to: IVNVVQIPHVMC*KCGSCLTCIKT
Trigger: AGTTTTGATGCAAGTCAAACATGAACCACACTTTCAACACATAACATGAGGTATTTGCACCACATTTACAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472146.5