RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZEB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000148516

Ensembl transcript IDs: ENST00000320985.14, ENST00000361642.9, ENST00000424869.6, ENST00000437844.6, ENST00000446923.7, ENST00000488625.6, ENST00000493835.5, ENST00000542879.5, ENST00000558832.5, ENST00000558863.5, ENST00000559496.5, ENST00000559858.5, ENST00000560196.5, ENST00000560909.2, ENST00000561061.5, ENST00000561304.5, ENST00000606671.5

Found 651 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCACGTaGTCATTCGAGAGGATTTCAGGCCCTGCCTCTTCCTGCTCTGTG +
Preference number: 1 (lower is better)
Translates to: LSSESPCEGDALAPT*SFERISGPASSCSV
Trigger: CACAGAGCAGGAAGAGGCAGGGCCTGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTaGCACCCACGTGCTCATTCGAGAGGATTTCAGGCCCTGCCTCTT +
Preference number: 1 (lower is better)
Translates to: SNSLSRPSRPVRETP*HPRAHSRGFQALPL
Trigger: AAGAGGCAGGGCCTGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 90 bp GACACCAAACCAACTGTTGGCAGAACAACAGCTTGCACCATGCCCTaGGGAGAACTGGTTGCCTGTAATGGGCCACCACCAGTGAAAACC +
Preference number: 1 (lower is better)
Translates to: DTKPTVGRTTACTMP*GELVACNGPPPVKT
Trigger: GGTTTTCACTGGTGGTGGCCCATTACAGGCAACCAGTTCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCAACAGTTGGTTTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 90 bp GTTTGCTTATTGGCAGCTAGCGCTCTTAAGCATGGAACACTGTTCTaGTCAGCAATGGCCACGATTGTGGGTAACTGGGCAGTGACTGTA +
Preference number: 1 (lower is better)
Translates to: VCLLAASALKHGTLF*SAMATIVGNWAVTV
Trigger: TACAGTCACTGCCCAGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAGCGCTAGCTGCCAATAAGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 90 bp GATCACTTTCAAGGGTGGTTCTTGGACTGCAGGGCTGACCGTAGTTaGGTAGGTGTATGCCACCTGGGGAATCAGAATCGTTTGCTTATT +
Preference number: 1 (lower is better)
Translates to: DHFQGWFLDCRADRS*VGVCHLGNQNRLLI
Trigger: AATAAGCAAACGATTCTGATTCCCCAGGTGGCATACACCTACTCAACTACGGTCAGCCCTGCAGTCCAAGAACCACCCTTGAAAGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR GCA 90 bp GGGGTTTATTCTCTATCTTTTGCCGTATCTGTGGTCGTGTGGGACTaGCTGGTGATGCTGAAAGAGACGGTGAAGAACACTGAGATGTCT +
Preference number: 1 (lower is better)
Translates to: GVYSLSFAVSVVVWD*LVMLKETVKNTEMS
Trigger: AGACATCTCAGTGTTCTTCACCGTCTCTTTCAGCATCACCAGGCAGTCCCACACGACCACAGATACGGCAAAAGATAGAGAATAAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 90 bp CTTGAAGGGGTTTATTCTCTATCTTTTGCCGTATCTGTGGTCGTGTaGGACTGCCTGGTGATGCTGAAAGAGACGGTGAAGAACACTGAG +
Preference number: 1 (lower is better)
Translates to: LEGVYSLSFAVSVVV*DCLVMLKETVKNTE
Trigger: CTCAGTGTTCTTCACCGTCTCTTTCAGCATCACCAGGCAGTCCCACACGACCACAGATACGGCAAAAGATAGAGAATAAACCCCTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 90 bp CATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTaGGCAGTGACTGTAGGTATAGCGATATTTATGGGGTTGGCACTT +
Preference number: 1 (lower is better)
Translates to: HGTLFWSAMATIVGN*AVTVGIAIFMGLAL
Trigger: AAGTGCCAACCCCATAAATATCGCTATACCTACAGTCACTGCCCAGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 90 bp TTGAGTAGGTGTATGCCACCTGGGGAATCAGAATCGTTTGCTTATTaGCAGCTAGCGCTCTTAAGCATGGAACACTGTTCTGGTCAGCAA +
Preference number: 1 (lower is better)
Translates to: LSRCMPPGESESFAY*QLALLSMEHCSGQQ
Trigger: TTGCTGACCAGAACAGTGTTCCATGCTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTCTGATTCCCCAGGTGGCATACACCTACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR GCA 90 bp CTGGTCTGTTGGCAGGTCATCCTCTGGTACACCTTCACAGTCAGCTaGATCTGTAACACTTTCTTCTTCCACAATATGCAGTTTGTCTTC +
Preference number: 1 (lower is better)
Translates to: LVCWQVILWYTFTVS*ICNTFFFHNMQFVF
Trigger: GAAGACAAACTGCATATTGTGGAAGAAGAAAGTGTTACAGATGCAGCTGACTGTGAAGGTGTACCAGAGGATGACCTGCCAACAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR GCA 90 bp ATCCTTCATCAGACCTTCAGTTTTTGCTTCTTCTCCCTCATTCTCTaGCTCTTCTACCTCTTCTTCTTCCACTTCTTCCTCCTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: ILHQTFSFCFFSLIL*LFYLFFFHFFLLLL
Trigger: GAGGAGGAGGAGGAAGAAGTGGAAGAAGAAGAGGTAGAAGAGGCAGAGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTGATGAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR GCA 90 bp TTGCAGATTGAGGCTGATCATTGTTCTTGGCAGGGATATTTACTTTaGCTGGTTCAGGAGAAGATGGTTCAGAAGACTGCACTGAAATCT +
Preference number: 1 (lower is better)
Translates to: LQIEADHCSWQGYLL*LVQEKMVQKTALKS
Trigger: AGATTTCAGTGCAGTCTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAATGATCAGCCTCAATCTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 90 bp AGAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATaGAGGCGGGTTAGAGCCTTGAAAATACTGAGAAATGGCACTTAC +
Preference number: 1 (lower is better)
Translates to: RDKSTNASYCRPHIG*RRVRALKILRNGTY
Trigger: GTAAGTGCCATTTCTCAGTATTTTCAAGGCTCTAACCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR TCA 90 bp GTCTTCCGCATTTTCTTTTTGGGCGGTGTAGAATCAGAGTCATTCTaGTCCTCTACATTTGATACTCCTTCTGAGCTAGTATCTTGTCTT +
Preference number: 1 (lower is better)
Translates to: VFRIFFLGGVESESF*SSTFDTPSELVSCL
Trigger: AAGACAAGATACTAGCTCAGAAGGAGTATCAAATGTAGAGGATCAGAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGCGGAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 90 bp GGTGAAGCATTGATTGTTTCTTGTTCTTTGGATGCAAGATTGGCTTaGTTATTCTCCAACACTTGCCTTATTACATTACCATCTACCGCC +
Preference number: 1 (lower is better)
Translates to: GEALIVSCSLDARLA*LFSNTCLITLPSTA
Trigger: GGCGGTAGATGGTAATGTAATAAGGCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCCAAAGAACAAGAAACAATCAATGCTTCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 90 bp ACAGCAGTGTCTTGTTGTTGTAGAAACTCTTCAACATTAGGATCATaGTTTTGCTCATTTTCTGCATCTGACTCGCATTCATCATCTTTT +
Preference number: 1 (lower is better)
Translates to: TAVSCCCRNSSTLGS*FCSFSASDSHSSSF
Trigger: AAAAGATGATGAATGCGAGTCAGATGCAGAAAATGAGCAAAACCATGATCCTAATGTTGAAGAGTTTCTACAACAACAAGACACTGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 90 bp ATCCTAATTTGGCTTACTAAGGAAATGAGAGTTGTATGGTTAGGCTaGTTTCTTAATAAAACTGCAGAGCATCATGCTATTAGTCACACA +
Preference number: 1 (lower is better)
Translates to: ILIWLTKEMRVVWLG*FLNKTAEHHAISHT
Trigger: TGTGTGACTAATAGCATGATGCTCTGCAGTTTTATTAAGAAATCAGCCTAACCATACAACTCTCATTTCCTTAGTAAGCCAAATTAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR TCA 90 bp ACTTGCCTTATTACATTACCATCTACCGCCACTTTAAGTACATTCTaGATATCACTTAAATTGATACTTATGGGAGACACCAAACCAACT +
Preference number: 1 (lower is better)
Translates to: TCLITLPSTATLSTF*ISLKLILMGDTKPT
Trigger: AGTTGGTTTGGTGTCTCCCATAAGTATCAATTTAAGTGATATTCAGAATGTACTTAAAGTGGCGGTAGATGGTAATGTAATAAGGCAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCACACCAAACCAACTGTTaGCAGAACAACAGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPHQTNC*QNNSLH
Trigger: GTGCAAGCTGTTGTTCTGCCAACAGTTGGTTTGGTG...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 90 bp TCCCTTCTCTTTCACTGCTCCTCCCTGGTAACACTGTCTGGTCTGTaGGCAGGTCATCCTCTGGTACACCTTCACAGTCAGCTGCATCTG +
Preference number: 2 (lower is better)
Translates to: SLLFHCSSLVTLSGL*AGHPLVHLHSQLHL
Trigger: CAGATGCAGCTGACTGTGAAGGTGTACCAGAGGATGACCTGCCAACAGACCAGACAGTGTTACCAGGGAGGAGCAGTGAAAGAGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAAACATTGTTAGTCCCTaGAATCAGAACTCAATGGCA +
Preference number: 2 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPNIVSP*NQNSMA
Trigger: TGCCATTGAGTTCTGATTGCAGGGACTAACAATGTT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAGAAAATACTGAGAAATaGCACTTACAGCACACAGGT +
Preference number: 2 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPENTEK*HLQHTG
Trigger: ACCTGTGTGCTGTAAGTGCCATTTCTCAGTATTTTC...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 90 bp TATCCTCCTCCTCTTCCTCTTTTTCACTGTCTTCATCCTCTTCCCTaGTCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACG +
Preference number: 2 (lower is better)
Translates to: YPPPLPLFHCLHPLP*SNSLSRPSRPVRET
Trigger: CGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGACAAGGGAAGAGGATGAAGACAGTGAAAAAGAGGAAGAGGAGGAGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGCTTCTGGTGTGCCCTaGCTCTGGTCCTCTTCAGGT +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTASGVP*LWSSSG
Trigger: ACCTGAAGAGGACCAGAGGCAGGGCACACCAGAAGC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGGGTGTGCCCTGCCTCTaGTCCTCTTCAGGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKGVPCL*SSSGAS
Trigger: TGAGGCACCTGAAGAGGACCAGAGGCAGGGCACACC...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGGCCACACATTGGATaGAGGCGGGTTAGAGCCTTG +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGRPHIG*RRVRAL
Trigger: CAAGGCTCTAACCCGCCTTCATCCAATGTGTGGCCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR TCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGGGAGTGGAGGAGGCTaGGTAGGCTGCTTTAGGTCA +
Preference number: 2 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSEGSGGG*VGCFRS
Trigger: TGACCTAAAGCAGCCTACTCAGCCTCCTCCACTCCC...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGGCCCCAGGATTTCTTaGCCTTCCTTTCCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTGPRIS*PSFPVS
Trigger: TGACACAGGAAAGGAAGGGCAAGAAATCCTGGGGCC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTGGCAGGTCATCCTCTaGTACACCTTCACAGTCAGC +
Preference number: 2 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHWQVIL*YTFTVS
Trigger: GCTGACTGTGAAGGTGTACCAGAGGATGACCTGCCA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCCTGGTAACACTGTCTaGTCTGTTGGCAGGTCATCC +
Preference number: 2 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHPGNTV*SVGRSS
Trigger: GGATGACCTGCCAACAGACCAGACAGTGTTACCAGG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTAGAAGGAGCAACCTGTaGAGAGGTTTTGTCAACTCT +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTRRSNL*RGFVNS
Trigger: AGAGTTGACAAAACCTCTTCACAGGTTGCTCCTTCT...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGTGCCTCAGGAAAAATaGCAGCAGTGTCTTGTTGTT +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTVPQEK*QQCLVV
Trigger: AACAACAAGACACTGCTGTCATTTTTCCTGAGGCAC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTAGGGCTGACCGTAGTTaGGTAGGTGTATGCCACCTG +
Preference number: 2 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFRADRS*VGVCHL
Trigger: CAGGTGGCATACACCTACTCAACTACGGTCAGCCCT...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCTGGTCCTCTTCAGGTaGCTCAGGAAAAATGACAGC +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLVLFR*LRKNDS
Trigger: GCTGTCATTTTTCCTGAGGCACCTGAAGAGGACCAG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGTATCTGTGGTCGTGTaGGACTGCCTGGTGATGCTG +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKVSVVV*DCLVML
Trigger: CAGCATCACCAGGCAGTCCCACACGACCACAGATAC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTCTTTTGCCGTATCTGTaGTCGTGTGGGACTGCCTGG +
Preference number: 2 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFLLPYL*SCGTAW
Trigger: CCAGGCAGTCCCACACGACCACAGATACGGCAAAAG...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTGCCCTGAGGAGAACTaGTTGCCTGTAATGGGCCAC +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKCPEEN*LPVMGH
Trigger: GTGGCCCATTACAGGCAACCAGTTCTCCTCAGGGCA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 90 bp GTGGGTAACTGGGCAGTGACTGTAGGTATAGCGATATTTATGGGGTaGGCACTTGGTGGGATTACATTTACAACTGGTTCTGAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: VGNWAVTVGIAIFMG*ALGGITFTTGSESV
Trigger: TACAGACTCAGAACCAGTTGTAAATGTAATCCCACCAAGTGCCAACCCCATAAATATCGCTATACCTACAGTCACTGCCCAGTTACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGACGGTGAAGAACACTaGGATGTCTTGAGTCCTGTT +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGDGEEH*DVLSPV
Trigger: AACAGGACTCAAGACATCTCAGTGTTCTTCACCGTC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAATCCCTTCTCTTTCACTaGTCCTCCCTGGTAACACTG +
Preference number: 2 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSESLLFH*SSLVTL
Trigger: CAGTGTTACCAGGGAGGAGCAGTGAAAGAGAAGGGA...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCACTGTCTGGTCTGTTaGCAGGTCATCCTCTGGTAC +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKHCLVC*QVILWY
Trigger: GTACCAGAGGATGACCTGCCAACAGACCAGACAGTG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGCTGAAATAACAGAATaGCCACCTTGTTGTATGGGT +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTAEITE*PPCCMG
Trigger: ACCCATACAACAAGGTGGCCATTCTGTTATTTCAGC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAAGAGGTTCTACTTGTaGCTCTTCTTGTGCACCCTC +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGKRFYL*LFLCTL
Trigger: GAGGGTGCACAAGAAGAGCCACAAGTAGAACCTCTT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGTGGCTGACACAAACTaGTCAAGTTCTCACACCCCA +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKVADTN*SSSHTP
Trigger: TGGGGTGTGAGAACTTGATCAGTTTGTGTCAGCCAC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTATGTGATGTCATGTaGCGTTCAAGTTGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLCDVM*RSSWVL
Trigger: CAGAACCCAACTTGAACGTCACATGACATCACATAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGTATGGGTGAAGCATTaGTTGTTTCTTGTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTVWVKH*LFLVLW
Trigger: CCAAAGAACAAGAAACAATCAATGCTTCACCCATAC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTACCTTGTTGTATGGGTaGAGCATTGATTGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTTLLYG*SIDCFL
Trigger: CAAGAAACAATCAATGCTTCACCCATACAACAAGGT...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTACACTGAAAAAGATCTaGAGATCTTTCTTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTTLKKI*RSFLVQ
Trigger: CTGCACCAAGAAAGATCTGCAGATCTTTTTCAGTGT...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGCTGATCATTGTTCTTaGCAGGGATATTTACTTTGC +
Preference number: 2 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTADHCS*QGYLLC
Trigger: GCAAAGTAAATATCCCTGCCAAGAACAATGATCAGC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGAATCAAATGCAGGATaGCAATGTACCCCATTTCAC +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGESNAG*QCTPFH
Trigger: GTGAAATGGGGTACATTGTCATCCTGCATTTGATTC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAAGGTTGTCCATTaGCTTCCTTTTGATAGTCAC +
Preference number: 2 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVFKVVH*LPFDSH
Trigger: GTGACTATCAAAAGGAAGTCAATGGACAACCTTAAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAACTTACTGCTTATGTGTaGGCTATAGGAGCCAGAATG +
Preference number: 2 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSELTAYV*AIGARM
Trigger: CATTCTGGCTCCTATAGCTCACACATAAGCAGTAAG...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTCTTGTCTTTCATCCTaGTTTCCATTTGGCTGGATC +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGSCLSS*FPFGWI
Trigger: GATCCAGCCAAATGGAAATCAGGATGAAAGACAAGA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAACATTGTTAGTCCCTaGAATCAGAACTCAATGGCA +
Preference number: 2 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTNIVSP*NQNSMA
Trigger: TGCCATTGAGTTCTGATTGCAGGGACTAACAATGTT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTAGTTAGCACGGGTTaGAACTACATTATACTTCTC +
Preference number: 2 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHVVSTG*NYIILL
Trigger: GAGAAGTATAATGTAGTTCCAACCCGTGCTAACTAC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGTAGTTAGCACGGGTTaGAACTACATTATACTTCTC +
Preference number: 2 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTVVSTG*NYIILL
Trigger: GAGAAGTATAATGTAGTTCCAACCCGTGCTAACTAC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATATTCCTCTTGTGGTaGAAGTTTAAGGTTGTCCAT +
Preference number: 2 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVIFLLW*KFKVVH
Trigger: ATGGACAACCTTAAACTTCCACCACAAGAGGAATAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 90 bp AGAGCCTTGAAAATACTGAGAAATGGCACTTACAGCACACAGGTCTaGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTC +
Preference number: 2 (lower is better)
Translates to: RALKILRNGTYSTQV*LKAKGDTKLHVISF
Trigger: GAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAGTATTTTCAAGGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 90 bp TCTTCAAAGGACTTTGTAGATTTACTGTGCTGTCCTGGGGTTCATTaGCATTTGCAGATTGAGGCTGATCATTGTTCTTGGCAGGGATAT +
Preference number: 2 (lower is better)
Translates to: SSKDFVDLLCCPGVH*HLQIEADHCSWQGY
Trigger: ATATCCCTGCCAAGAACAATGATCAGCCTCAATCTGCAAATGCAAATGAACCCCAGGACAGCACAGTAAATCTACAAAGTCCTTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCATTATACTTCTCTGTaGAGGGAATTTTGTAGTGCA +
Preference number: 2 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHHYTSL*REFCSA
Trigger: TGCACTACAAAATTCCCTTCACAGAGAAGTATAATG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR TCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGATGCAAGATTGGCTTaGTTATTCTCCAACACTTGC +
Preference number: 2 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSEDARLA*LFSNTC
Trigger: GCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATC...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGGTTTTCTAATCTGCTaGATGTTACAAACTTGTTCC +
Preference number: 2 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTGFLIC*MLQTCS
Trigger: GGAACAAGTTTGTAACATGCAGCAGATTAGAAAACC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGGTTTTCTAATCTGCTaGATGTTACAAACTTGTTCC +
Preference number: 2 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHGFLIC*MLQTCS
Trigger: GGAACAAGTTTGTAACATGCAGCAGATTAGAAAACC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR GCA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGTTATTCTCTATCTTTTaGCGTATCTGTGGTCGTGTG +
Preference number: 2 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKLFSIF*RICGRV
Trigger: CACACGACCACAGATACGGCAAAAGATAGAGAATAA...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGAAAATACTGAGAAATaGCACTTACAGCACACAGGT +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGENTEK*HLQHTG
Trigger: ACCTGTGTGCTGTAAGTGCCATTTCTCAGTATTTTC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTCTGCAGATCTTTCTTaGTGCAGGAGGGACCTCTTT +
Preference number: 2 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYSADLS*CRRDLF
Trigger: AAAGAGGTCCCTCCTGCACCAAGAAAGATCTGCAGA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTGAATCGTTTGCTTATTaGCAGCTAGCGCTCTTAAGC +
Preference number: 2 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFESFAY*QLALLS
Trigger: GCTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTC...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 90 bp AAGGACTTTGTAGATTTACTGTGCTGTCCTGGGGTTCATTTGCATTaGCAGATTGAGGCTGATCATTGTTCTTGGCAGGGATATTTACTT +
Preference number: 2 (lower is better)
Translates to: KDFVDLLCCPGVHLH*QIEADHCSWQGYLL
Trigger: AAGTAAATATCCCTGCCAAGAACAATGATCAGCCTCAATCTGCAAATGCAAATGAACCCCAGGACAGCACAGTAAATCTACAAAGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCATTATACTTCTCTGTaGAGGGAATTTTGTAGTGCA +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGHYTSL*REFCSA
Trigger: TGCACTACAAAATTCCCTTCACAGAGAAGTATAATG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCACCTCCAAGAACACTaGAAAAGATCTGCAGATCTT +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKHLQEH*KRSADL
Trigger: AAGATCTGCAGATCTTTTTCAGTGTTCTTGGAGGTG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGGTTTTCTAATCTGCTaGATGTTACAAACTTGTTCC +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGGFLIC*MLQTCS
Trigger: GGAACAAGTTTGTAACATGCAGCAGATTAGAAAACC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAGTTCTTCTATCAGCTaGTTTCTTAAGGCTAACAAT +
Preference number: 2 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTSSSIS*FLKANN
Trigger: ATTGTTAGCCTTAAGAAAGCAGCTGATAGAAGAACT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR GCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTAAGTTGGGTTCTGTATaGAAAGGTGTAACTGCACAG +
Preference number: 2 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFKLGSV*KGVTAQ
Trigger: CTGTGCAGTTACACCTTTGCATACAGAACCCAACTT...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTCGATATTTATGGGGTTaGCACTTGGTGGGATTACAT +
Preference number: 2 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFRYLWG*HLVGLH
Trigger: ATGTAATCCCACCAAGTGCCAACCCCATAAATATCG...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAACATTATACTTCTCTGTaGAGGGAATTTTGTAGTGCA +
Preference number: 2 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSEHYTSL*REFCSA
Trigger: TGCACTACAAAATTCCCTTCACAGAGAAGTATAATG...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGAGAGAACAAGGTGGCTaGCACAAACTGATCAAGTTC +
Preference number: 2 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVREQGG*HKLIKF
Trigger: GAACTTGATCAGTTTGTGTCAGCCACCTTGTTCTCT...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTCTCATTTTCTGCATCTaGCTCGCATTCATCATCTTT +
Preference number: 2 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFLIFCI*LAFIIF
Trigger: AAAGATGATGAATGCGAGTCAGATGCAGAAAATGAG...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTGCGTCACATGTCTTTaGTCTCTTCCTGATTTATGT +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKCVTCL*SLPDLC
Trigger: ACATAAATCAGGAAGAGATCAAAGACATGTGACGCA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCAACCACTATGGGTTTaGATTCATAATCCACAGGTT +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKQPLWV*IHNPQV
Trigger: AACCTGTGGATTATGAATTCAAACCCATAGTGGTTG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTACAGCACACAGGTCTTaGTTAAGGCCAAAGGAGATA +
Preference number: 2 (lower is better)
Translates to: QHKINTEELKDEMSQCFSTAHRS*LRPKEI
Trigger: TATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTGCAGGAGAACCAATTaGATCTCTACTTTAAATCTT +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGCRRTN*ISTLNL
Trigger: AAGATTTAAAGTAGAGATGCAATTGGTTCTCCTGCA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGTAGTTAGCACGGGTTaGAACTACATTATACTTCTC +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKVVSTG*NYIILL
Trigger: GAGAAGTATAATGTAGTTCCAACCCGTGCTAACTAC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTTGTTTCTTGTTCTTTaGATGCAAGATTGGCTTGAT +
Preference number: 2 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLFLVL*MQDWLD
Trigger: ATCAAGCCAATCTTGCATCCAAAGAACAAGAAACAA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTGATATTTACTTTGCCTaGTTCAGGAGAAGATGGTTC +
Preference number: 2 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFDIYFA*FRRRWF
Trigger: GAACCATCTTCTCCTGAACCAGGCAAAGTAAATATC...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 90 bp GTGGTAGGTTTACTGAATCAGCAATTTTTGAGAGCTCTTCTGCACTaGGTTGTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGA +
Preference number: 2 (lower is better)
Translates to: VVGLLNQQFLRALLH*VVHSKHNMLLGETR
Trigger: TCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCACAACCAAGTGCAGAAGAGCTCTCAAAAATTGCTGATTCAGTAAACCTACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGGTTTTCTAATCTGCTaGATGTTACAAACTTGTTCC +
Preference number: 2 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKGFLIC*MLQTCS
Trigger: GGAACAAGTTTGTAACATGCAGCAGATTAGAAAACC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATAACATTGTTAGTCCCTaGAATCAGAACTCAATGGCA +
Preference number: 2 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYNIVSP*NQNSMA
Trigger: TGCCATTGAGTTCTGATTGCAGGGACTAACAATGTT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 90 bp TTCTTGTTCTTTGGATGCAAGATTGGCTTGATTATTCTCCAACACTaGCCTTATTACATTACCATCTACCGCCACTTTAAGTACATTCTG +
Preference number: 2 (lower is better)
Translates to: FLFFGCKIGLIILQH*PYYITIYRHFKYIL
Trigger: CAGAATGTACTTAAAGTGGCGGTAGATGGTAATGTAATAAGGCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCCAAAGAACAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCATTATACTTCTCTGTaGAGGGAATTTTGTAGTGCA +
Preference number: 2 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYHYTSL*REFCSA
Trigger: TGCACTACAAAATTCCCTTCACAGAGAAGTATAATG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 90 bp ACAAACACTGATTCTGATGATTTTGCTGTCCTTATCAGATTAACATaGTTAGTCCCTGCAATCAGAACTCAATGGCAATCTTTTGAACTC +
Preference number: 2 (lower is better)
Translates to: TNTDSDDFAVLIRLT*LVPAIRTQWQSFEL
Trigger: GAGTTCAAAAGATTGCCATTGAGTTCTGATTGCAGGGACTAACAATGTTAATCTGATAAGGACAGCAAAATCATCAGAATCAGTGTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTCAACATTAGGATCATaGTTTTGCTCATTTTCTGCA +
Preference number: 2 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYSTLGS*FCSFSA
Trigger: TGCAGAAAATGAGCAAAACCATGATCCTAATGTTGA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 90 bp AGAGAAATTCTGAAAATCAATCAACATAAAATCAATACCGAGGAATaGAAGGATGAAATGTCCCAGTGTTTCAGTTTCTCTGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: REILKINQHKINTEE*KDEMSQCFSFSDRV
Trigger: GACTCTGTCAGAGAAACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTGATTGATTTTCAGAATTTCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR GCA 72 bp GAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCACGTaGTCATTCGAGAGGATTTCAGGCCCTGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: ESPCEGDALAPT*SFERISGPASS
Trigger: GGAAGAGGCAGGGCCTGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 72 bp CTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTaGCACCCACGTGCTCATTCGAGAGGATTTCAGGCC +
Preference number: 3 (lower is better)
Translates to: LSRPSRPVRETP*HPRAHSRGFQA
Trigger: GGCCTGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAAAAGGGGTTGAACAGTaGATTCCTGAAGCAACCACT +
Preference number: 3 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPKGVEQ*IPEATT
Trigger: AGTGGTTGCTTCAGGAATCAACTGTTCAACCCCTTT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAGCAGGGATATTTACTTaGCCTGGTTCAGGAGAAGAT +
Preference number: 3 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPAGIFT*PGSGED
Trigger: ATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGC...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 72 bp CCAACTGTTGGCAGAACAACAGCTTGCACCATGCCCTaGGGAGAACTGGTTGCCTGTAATGGGCCACCACCA +
Preference number: 3 (lower is better)
Translates to: PTVGRTTACTMP*GELVACNGPPP
Trigger: TGGTGGTGGCCCATTACAGGCAACCAGTTCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCAACAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 72 bp CAAGGGTGGTTCTTGGACTGCAGGGCTGACCGTAGTTaGGTAGGTGTATGCCACCTGGGGAATCAGAATCGT +
Preference number: 3 (lower is better)
Translates to: QGWFLDCRADRS*VGVCHLGNQNR
Trigger: ACGATTCTGATTCCCCAGGTGGCATACACCTACTCAACTACGGTCAGCCCTGCAGTCCAAGAACCACCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR GCA 72 bp CCAAACCAACTGTTGGCAGAACAACAGCTTGCACCATaGCCTGAGGAGAACTGGTTGCCTGTAATGGGCCAC +
Preference number: 3 (lower is better)
Translates to: PNQLLAEQQLAP*PEENWLPVMGH
Trigger: GTGGCCCATTACAGGCAACCAGTTCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCAACAGTTGGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 72 bp CCTTCTCTTTCACTGCTCCTCCCTGGTAACACTGTCTaGTCTGTTGGCAGGTCATCCTCTGGTACACCTTCA +
Preference number: 3 (lower is better)
Translates to: PSLSLLLPGNTV*SVGRSSSGTPS
Trigger: TGAAGGTGTACCAGAGGATGACCTGCCAACAGACCAGACAGTGTTACCAGGGAGGAGCAGTGAAAGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 72 bp TTGGCAGCTAGCGCTCTTAAGCATGGAACACTGTTCTaGTCAGCAATGGCCACGATTGTGGGTAACTGGGCA +
Preference number: 3 (lower is better)
Translates to: LAASALKHGTLF*SAMATIVGNWA
Trigger: TGCCCAGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAGCGCTAGCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR GCA 72 bp TCTCTATCTTTTGCCGTATCTGTGGTCGTGTGGGACTaGCTGGTGATGCTGAAAGAGACGGTGAAGAACACT +
Preference number: 3 (lower is better)
Translates to: SLSFAVSVVVWD*LVMLKETVKNT
Trigger: AGTGTTCTTCACCGTCTCTTTCAGCATCACCAGGCAGTCCCACACGACCACAGATACGGCAAAAGATAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 72 bp CTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTaGGCAGTGACTGTAGGTATAGCGATATTTATGGGG +
Preference number: 3 (lower is better)
Translates to: LFWSAMATIVGN*AVTVGIAIFMG
Trigger: CCCCATAAATATCGCTATACCTACAGTCACTGCCCAGTTACCCACAATCGTGGCCATTGCTGACCAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTATTGTAGGCCACACATaGGATGAAGGCGGGTTAGAG +
Preference number: 3 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTIVGHT*DEGGLE
Trigger: CTCTAACCCGCCTTCATCCAATGTGTGGCCTACAAT...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 72 bp GTTTATTCTCTATCTTTTGCCGTATCTGTGGTCGTGTaGGACTGCCTGGTGATGCTGAAAGAGACGGTGAAG +
Preference number: 3 (lower is better)
Translates to: VYSLSFAVSVVV*DCLVMLKETVK
Trigger: CTTCACCGTCTCTTTCAGCATCACCAGGCAGTCCCACACGACCACAGATACGGCAAAAGATAGAGAATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGATCTGCAGATCTTTCTaGGTGCAGGAGGGACCTCTT +
Preference number: 3 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGICRSF*VQEGPL
Trigger: AAGAGGTCCCTCCTGCACCAAGAAAGATCTGCAGAT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTCCCCCTTCAAAGCTTTaGTCCTTCTCAGACTTAACA +
Preference number: 3 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTPPSKL*SFSDLT
Trigger: TGTTAAGTCTGAGAAGGACAAAAGCTTTGAAGGGGG...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 72 bp CTGAGAGTCAGAAAGGCATCTAAACCCAGGCTTCCCTaGAATGACCTGAAGCATGAAATGCGGAGGATTAAG +
Preference number: 3 (lower is better)
Translates to: LRVRKASKPRLP*NDLKHEMRRIK
Trigger: CTTAATCCTCCGCATTTCATGCTTCAGGTCATTTCAGGGAAGCCTGGGTTTAGATGCCTTTCTGACTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR GCA 72 bp TGGCAGGTCATCCTCTGGTACACCTTCACAGTCAGCTaGATCTGTAACACTTTCTTCTTCCACAATATGCAG +
Preference number: 3 (lower is better)
Translates to: WQVILWYTFTVS*ICNTFFFHNMQ
Trigger: CTGCATATTGTGGAAGAAGAAAGTGTTACAGATGCAGCTGACTGTGAAGGTGTACCAGAGGATGACCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTACAGCACACAGGTCTaGCTTAAGGCCAAAGGAGAT +
Preference number: 3 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGYSTQV*LKAKGD
Trigger: ATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGTACAGCACACAGGTCTaGCTTAAGGCCAAAGGAGAT +
Preference number: 3 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKYSTQV*LKAKGD
Trigger: ATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTA...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGGCGGGTTAGAGCCTaGAAAATACTGAGAAATGGC +
Preference number: 3 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGRRVRA*KILRNG
Trigger: GCCATTTCTCAGTATTTTCAAGGCTCTAACCCGCCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGCCTGAGGAGAACTGGTaGCCTGTAATGGGCCACCAC +
Preference number: 3 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVPEENW*PVMGHH
Trigger: GTGGTGGCCCATTACAGGCAACCAGTTCTCCTCAGG...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGGATGCAAGATTGGCTaGATTATTCTCCAACACTTG +
Preference number: 3 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTGCKIG*IILQHL
Trigger: CAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 72 bp GGAGGATTAAGGATTTCAGGAAGAAGGAGCAACCTGTaGAGAGGTTTTGTCAACTCTGACCTCTCCAGAAAC +
Preference number: 3 (lower is better)
Translates to: GGLRISGRRSNL*RGFVNSDLSRN
Trigger: GTTTCTGGAGAGGTCAGAGTTGACAAAACCTCTTCACAGGTTGCTCCTTCTTCCTGAAATCCTTAATCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR TCA 72 bp GAAAGGCATCTAAACCCAGGCTTCCCTGAAATGACCTaGAGCATGAAATGCGGAGGATTAAGGATTTCAGGA +
Preference number: 3 (lower is better)
Translates to: ERHLNPGFPEMT*SMKCGGLRISG
Trigger: TCCTGAAATCCTTAATCCTCCGCATTTCATGCTTCAGGTCATTTCAGGGAAGCCTGGGTTTAGATGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR TCA 72 bp GCCTGGTTCAGGAGAAGATGGTTCAGAAGACTGCACTaGAATCTGTCCAGCTTGCATCTTTTCAAACCACTT +
Preference number: 3 (lower is better)
Translates to: AWFRRRWFRRLH*NLSSLHLFKPL
Trigger: AAGTGGTTTGAAAAGATGCAAGCTGGACAGATTTCAGTGCAGTCTTCTGAACCATCTTCTCCTGAACCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR GCA 72 bp GAGGCTGATCATTGTTCTTGGCAGGGATATTTACTTTaGCTGGTTCAGGAGAAGATGGTTCAGAAGACTGCA +
Preference number: 3 (lower is better)
Translates to: EADHCSWQGYLL*LVQEKMVQKTA
Trigger: TGCAGTCTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAATGATCAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 72 bp AAAGGTTTAGAGGTGATGGGGATGGTGTACTACTTCTaGAACCATTGGTGGTTGATCCCACTGGTAAAACTG +
Preference number: 3 (lower is better)
Translates to: KGLEVMGMVYYF*NHWWLIPLVKL
Trigger: CAGTTTTACCAGTGGGATCAACCACCAATGGTTCCAGAAGTAGTACACCATCCCCATCACCTCTAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGATTGTAGGCCACACATaGGATGAAGGCGGGTTAGAG +
Preference number: 3 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKIVGHT*DEGGLE
Trigger: CTCTAACCCGCCTTCATCCAATGTGTGGCCTACAAT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGTGGCAGAACAACAGCTaGCACCATGCCCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVWQNNS*HHALRR
Trigger: TCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCA...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 72 bp GCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGGCTaGCTAGGAGACAAATTGCCATCTCCAGTAGCTGAT +
Preference number: 3 (lower is better)
Translates to: AFRRDKRFFKGG*LGDKLPSPVAD
Trigger: ATCAGCTACTGGAGATGGCAATTTGTCTCCTAGTCAGCCACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGACAGCAGTTCAGGCTaGTTGATGCATTTTATTGTG +
Preference number: 3 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGDSSSG*LMHFIV
Trigger: CACAATAAAATGCATCAACAAGCCTGAACTGCTGTC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCTTTATATTCCTCTaGTGGTGGAAGTTTAAGGTT +
Preference number: 3 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLFIFL*WWKFKV
Trigger: AACCTTAAACTTCCACCACAAGAGGAATATAAAGAG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGCCACACTCAGTGCATTaGAATTTACGATTACACCCA +
Preference number: 3 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKPHSVH*NLRLHP
Trigger: TGGGTGTAATCGTAAATTCAAATGCACTGAGTGTGG...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCTCAATGGCAATCTTTaGAACTCCATTTTAAACCAC +
Preference number: 3 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLNGNL*NSILNH
Trigger: GTGGTTTAAAATGGAGTTCAAAAGATTGCCATTGAG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTATTGTAGGCCACACATaGGATGAAGGCGGGTTAGAG +
Preference number: 3 (lower is better)
Translates to: QHKINTEELKDEMSQCFSIVGHT*DEGGLE
Trigger: CTCTAACCCGCCTTCATCCAATGTGTGGCCTACAAT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGGTGGAAGTTTAAGGTaGTCCATTGACTTCCTTTTG +
Preference number: 3 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSEGGSLR*SIDFLL
Trigger: CAAAAGGAAGTCAATGGACAACCTTAAACTTCCACC...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CCA 72 bp TCAACCAAAGGAAGACTGATGGCTGAAATAACAGAATaGCCACCTTGTTGTATGGGTGAAGCATTGATTGTT +
Preference number: 3 (lower is better)
Translates to: STKGRLMAEITE*PPCCMGEALIV
Trigger: AACAATCAATGCTTCACCCATACAACAAGGTGGCCATTCTGTTATTTCAGCCATCAGTCTTCCTTTGGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCTCAATGGCAATCTTTaGAACTCCATTTTAAACCAC +
Preference number: 3 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLNGNL*NSILNH
Trigger: GTGGTTTAAAATGGAGTTCAAAAGATTGCCATTGAG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCTTATCAGATTAACATaGTTAGTCCCTGCAATCAGA +
Preference number: 3 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLIRLT*LVPAIR
Trigger: TCTGATTGCAGGGACTAACAATGTTAATCTGATAAG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGAGGCGGGTTAGAGCCTaGAAAATACTGAGAAATGGC +
Preference number: 3 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVRRVRA*KILRNG
Trigger: GCCATTTCTCAGTATTTTCAAGGCTCTAACCCGCCT...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGATGCAGGAGAACCAATaGCATCTCTACTTTAAATCT +
Preference number: 3 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGMQENQ*HLYFKS
Trigger: AGATTTAAAGTAGAGATGCAATTGGTTCTCCTGCAT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAAGCAGTTCAGGCTTGTaGATGCATTTTATTGTGAGA +
Preference number: 3 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSESSSGL*MHFIVR
Trigger: TCTCACAATAAAATGCATCAACAAGCCTGAACTGCT...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCATGTGACGTTCAAGTaGGGTTCTGTATGCAAAGGT +
Preference number: 3 (lower is better)
Translates to: QHKINTEELKDEMSQCFSHVTFK*GSVCKG
Trigger: ACCTTTGCATACAGAACCCAACTTGAACGTCACATG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 72 bp TCAACAAATGCTAGTTATTGTAGGCCACACATTGGATaGAGGCGGGTTAGAGCCTTGAAAATACTGAGAAAT +
Preference number: 3 (lower is better)
Translates to: STNASYCRPHIG*RRVRALKILRN
Trigger: ATTTCTCAGTATTTTCAAGGCTCTAACCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR TCA 72 bp ATTTTCTTTTTGGGCGGTGTAGAATCAGAGTCATTCTaGTCCTCTACATTTGATACTCCTTCTGAGCTAGTA +
Preference number: 3 (lower is better)
Translates to: IFFLGGVESESF*SSTFDTPSELV
Trigger: TACTAGCTCAGAAGGAGTATCAAATGTAGAGGATCAGAATGACTCTGATTCTACACCGCCCAAAAAGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCTCAATGGCAATCTTTaGAACTCCATTTTAAACCAC +
Preference number: 3 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLNGNL*NSILNH
Trigger: GTGGTTTAAAATGGAGTTCAAAAGATTGCCATTGAG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR TCA 72 bp TACCCAAATTCAGCTCAAGATGAATCAAATGCAGGATaGCAATGTACCCCATTTCACAGTTTTCCAAAGAAA +
Preference number: 3 (lower is better)
Translates to: YPNSAQDESNAG*QCTPFHSFPKK
Trigger: TTTCTTTGGAAAACTGTGAAATGGGGTACATTGTCATCCTGCATTTGATTCATCTTGAGCTGAATTTGGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCTTATCAGATTAACATaGTTAGTCCCTGCAATCAGA +
Preference number: 3 (lower is better)
Translates to: QHKINTEELKDEMSQCFSLIRLT*LVPAIR
Trigger: TCTGATTGCAGGGACTAACAATGTTAATCTGATAAG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTCCACAATATGCAGTTaGTCTTCATCATCTGAATCT +
Preference number: 3 (lower is better)
Translates to: QHKINTEELKDEMSQCFSSTICS*SSSSES
Trigger: AGATTCAGATGATGAAGACAAACTGCATATTGTGGA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR TCA 72 bp ATTACATTACCATCTACCGCCACTTTAAGTACATTCTaGATATCACTTAAATTGATACTTATGGGAGACACC +
Preference number: 3 (lower is better)
Translates to: ITLPSTATLSTF*ISLKLILMGDT
Trigger: GGTGTCTCCCATAAGTATCAATTTAAGTGATATTCAGAATGTACTTAAAGTGGCGGTAGATGGTAATGTAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGGTCCGAGTCGCCCTGTaGGGGAGACGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKVRVAL*GRRPGT
Trigger: GGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGAC...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGTCCGAGTCGCCCTGTaGGGGAGACGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTVRVAL*GRRPGT
Trigger: GGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGAC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAAGAAGGAGCAACCTGTaGAGAGGTTTTGTCAACTCT +
Preference number: 4 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPRRSNL*RGFVNS
Trigger: AGAGTTGACAAAACCTCTTCACAGGTTGCTCCTTCT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAACGATTGTGGGTAACTaGGCAGTGACTGTAGGTATA +
Preference number: 4 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPTIVGN*AVTVGI
Trigger: TATACCTACAGTCACTGCCCAGTTACCCACAATCGT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCATCTTGTCTTTCATCCTaGTTTCCATTTGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPSCLSS*FPFGWI
Trigger: GATCCAGCCAAATGGAAATCAGGATGAAAGACAAGA...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCACAGACCTTCAGTTTTTaGTTCTTCTCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPQTFSF*FFSLIL
Trigger: GAGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTG...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGGTGAGGGAGACGCCCTaGCACCCACGTGCTCATTCG +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKVRETP*HPRAHS
Trigger: CGAATGAGCACGTGGGTGCCAGGGCGTCTCCCTCAC...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGTCCGAGTCGCCCTGTaGGGGAGACGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKVRVAL*GRRPGT
Trigger: GGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGAC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAACACTGAAAAAGATCTaGAGATCTTTCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPTLKKI*RSFLVQ
Trigger: CTGCACCAAGAAAGATCTGCAGATCTTTTTCAGTGT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAGATATTTACTTTGCCTaGTTCAGGAGAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPDIYFA*FRRRWF
Trigger: GAACCATCTTCTCCTGAACCAGGCAAAGTAAATATC...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTGAGGGAGACGCCCTaGCACCCACGTGCTCATTCG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHVRETP*HPRAHS
Trigger: CGAATGAGCACGTGGGTGCCAGGGCGTCTCCCTCAC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp TTTCACTGCTCCTCCCTGGTAACACTGTCTGGTCTGTaGGCAGGTCATCCTCTGGTACACCTTCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: FHCSSLVTLSGL*AGHPLVHLHSQ
Trigger: CTGACTGTGAAGGTGTACCAGAGGATGACCTGCCAACAGACCAGACAGTGTTACCAGGGAGGAGCAGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGCCATCCGCCATaGTCCTCTCGCTTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVWGHPP*SSRLCL
Trigger: TAGACACAAGCGAGAGGATCATGGCGGATGGCCCCA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320985.14
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGAGTGGAGGAGGCTaGGTAGGCTGCTTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVGSGGG*VGCFRS
Trigger: TGACCTAAAGCAGCCTACTCAGCCTCCTCCACTCCC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAGAATCAGAGTCATTCTaGTCCTCTACATTTGATACT +
Preference number: 4 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPESESF*SSTFDT
Trigger: AGTATCAAATGTAGAGGATCAGAATGACTCTGATTC...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGTCCGAGTCGCCCTGTaGGGGAGACGCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYVRVAL*GRRPGT
Trigger: GGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGAC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTTCGCCTGCTTTCTaGGCTTACACCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVGSPAF*AYTWGH
Trigger: ATGGCCCCAGGTGTAAGCGCAGAAAGCAGGCGAACC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTCTGGTGTGCCCTaGCTCTGGTCCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVASGVP*LWSSSG
Trigger: ACCTGAAGAGGACCAGAGGCAGGGCACACCAGAAGC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGCTTGCACCATGCCCTaGGGAGAACTGGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTACTMP*GELVAC
Trigger: ACAGGCAACCAGTTCTCCTCAGGGCATGGTGCAAGC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGGGAGTGGAGGAGGCTaGGTAGGCTGCTTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHGSGGG*VGCFRS
Trigger: TGACCTAAAGCAGCCTACTCAGCCTCCTCCACTCCC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGAGGCCACACATTGGATaGAGGCGGGTTAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKRPHIG*RRVRAL
Trigger: CAAGGCTCTAACCCGCCTTCATCCAATGTGTGGCCT...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGCTTCTGGTGTGCCCTaGCTCTGGTCCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHASGVP*LWSSSG
Trigger: ACCTGAAGAGGACCAGAGGCAGGGCACACCAGAAGC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTCGTGTGGGACTaGCTGGTGATGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVVVVWD*LVMLKE
Trigger: CTCTTTCAGCATCACCAGGCAGTCCCACACGACCAC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGCCCTGGCACCCACGTaGTCATTCGAGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTALAPT*SFERIS
Trigger: TGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGGTGTGCCCTGCCTCTaGTCCTCTTCAGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGGVPCL*SSSGAS
Trigger: TGAGGCACCTGAAGAGGACCAGAGGCAGGGCACACC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGCTTTTGCCGTATCTGTaGTCGTGTGGGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKLLPYL*SCGTAW
Trigger: CCAGGCAGTCCCACACGACCACAGATACGGCAAAAG...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGCTTGCACCATGCCCTaGGGAGAACTGGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGACTMP*GELVAC
Trigger: ACAGGCAACCAGTTCTCCTCAGGGCATGGTGCAAGC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATAGGGCTGACCGTAGTTaGGTAGGTGTATGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHRADRS*VGVCHL
Trigger: CAGGTGGCATACACCTACTCAACTACGGTCAGCCCT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAGGCCACACATTGGATaGAGGCGGGTTAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTRPHIG*RRVRAL
Trigger: CAAGGCTCTAACCCGCCTTCATCCAATGTGTGGCCT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGCTTGTGTCTAAATaGTCGAGTCACCTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVSLVSK*SSHLLP
Trigger: GGGGAGGAGGTGACTCGAGCATTTAGACACAAGCGA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320985.14
CDS-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGCTTCTGGTGTGCCCTaGCTCTGGTCCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGASGVP*LWSSSG
Trigger: ACCTGAAGAGGACCAGAGGCAGGGCACACCAGAAGC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAACAGCTTGCACCATaGCCTGAGGAGAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVQQLAP*PEENWL
Trigger: CAACCAGTTCTCCTCAGGGCATGGTGCAAGCTGTTG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGCCCTGGCACCCACGTaGTCATTCGAGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHALAPT*SFERIS
Trigger: TGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCCCCAGGATTTCTTaGCCTTCCTTTCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVGPRIS*PSFPVS
Trigger: TGACACAGGAAAGGAAGGGCAAGAAATCCTGGGGCC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTCACTGTCTGGTCTGTTaGCAGGTCATCCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTHCLVC*QVILWY
Trigger: GTACCAGAGGATGACCTGCCAACAGACCAGACAGTG...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTCCTGGTAACACTGTCTaGTCTGTTGGCAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTPGNTV*SVGRSS
Trigger: GGATGACCTGCCAACAGACCAGACAGTGTTACCAGG...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCTTTTGCCGTATCTGTaGTCGTGTGGGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLLPYL*SCGTAW
Trigger: CCAGGCAGTCCCACACGACCACAGATACGGCAAAAG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATGCCCTGAGGAGAACTaGTTGCCTGTAATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTCPEEN*LPVMGH
Trigger: GTGGCCCATTACAGGCAACCAGTTCTCCTCAGGGCA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACACTGAGATGTCTTaGGTCCTGTTCTTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVNTEMS*VLFLVA
Trigger: GGCGACCAAGAACAGGACTCAAGACATCTCAGTGTT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTAACACTGAGATGTCTTaGGTCCTGTTCTTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTNTEMS*VLFLVA
Trigger: GGCGACCAAGAACAGGACTCAAGACATCTCAGTGTT...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAAGTGCAGGAGCTaGGAGTCAGAAAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVQKCRS*ESERHL
Trigger: TAGATGCCTTTCTGACTCTCAGCTCCTGCACTTCTG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTCTCTTTCACTaGTCCTCCCTGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVSLLFH*SSLVTL
Trigger: CAGTGTTACCAGGGAGGAGCAGTGAAAGAGAAGGGA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGTCCCTTCTCTTTCACTaGTCCTCCCTGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKSLLFH*SSLVTL
Trigger: CAGTGTTACCAGGGAGGAGCAGTGAAAGAGAAGGGA...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGGCCCCAGGATTTCTTaGCCTTCCTTTCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHGPRIS*PSFLSS
Trigger: GGATGACAGAAAGGAAGGGCAAGAAATCCTGGGGCC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320985.14
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACAACAGCTTGCACCATaGCCTGAGGAGAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTQQLAP*PEENWL
Trigger: CAACCAGTTCTCCTCAGGGCATGGTGCAAGCTGTTG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACCTCTTCCTGCTCTGTaGTGTCACGTTCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTPLPAL*CHVLPL
Trigger: AAGCGGAAGAACGTGACAGCACAGAGCAGGAAGAGG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGCCCTGGCACCCACGTaGTCATTCGAGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGALAPT*SFERIS
Trigger: TGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATGGCAGGTCATCCTCTaGTACACCTTCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTWQVIL*YTFTVS
Trigger: GCTGACTGTGAAGGTGTACCAGAGGATGACCTGCCA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACACTGTCTGGTCTGTTaGCAGGTCATCCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTHCLVC*QVILWY
Trigger: GTACCAGAGGATGACCTGCCAACAGACCAGACAGTG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTGCCCTGAGGAGAACTaGTTGCCTGTAATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGCPEEN*LPVMGH
Trigger: GTGGCCCATTACAGGCAACCAGTTCTCCTCAGGGCA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTCAAGGGTGGTTCTTaGACTGCAGGGCTGACCGTA +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHFKGGS*TAGLTV
Trigger: TACGGTCAGCCCTGCAGTCCAAGAACCACCCTTGAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGTGAGGGAGACGCCCTaGCACCCACGTGCTCATTCG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYVRETP*HPRAHS
Trigger: CGAATGAGCACGTGGGTGCCAGGGCGTCTCCCTCAC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp GTGTATGCCACCTGGGGAATCAGAATCGTTTGCTTATaGGCAGCTAGCGCTCTTAAGCATGGAACACTGTTC +
Preference number: 4 (lower is better)
Translates to: VYATWGIRIVCL*AASALKHGTLF
Trigger: GAACAGTGTTCCATGCTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTCTGATTCCCCAGGTGGCATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCCTAAGCTGCTTGCTTaGCTTTCAGCCCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGPKLLA*LSALSS
Trigger: GGATGACAGGGCTGAAAGTCAAGCAAGCAGCTTAGG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCAGAAGTGCAGGAGCTaGGAGTCAGAAAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHQKCRS*ESERHL
Trigger: TAGATGCCTTTCTGACTCTCAGCTCCTGCACTTCTG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGGTTCGCCTGCTTTCTaGGCTTACACCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKGSPAF*AYTWGH
Trigger: ATGGCCCCAGGTGTAAGCGCAGAAAGCAGGCGAACC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424869.6
ENST00000437844.6
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCGCCGCGGGTTCGCCTaGTTTCTGCGCTTACACCTG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSRRGFA*FLRLHL
Trigger: CAGGTGTAAGCGCAGAAAGCAGGCGAACCCGCGGCG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCTGGTCCTCTTCAGGTaGCTCAGGAAAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLVLFR*LRKNDS
Trigger: GCTGTCATTTTTCCTGAGGCACCTGAAGAGGACCAG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGGTCCTGGGGTTCATTTaGATTTGCAGATTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKVLGFI*ICRLRL
Trigger: CAGCCTCAATCTGCAAATGCAAATGAACCCCAGGAC...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGGCTCTTCTTGTaGACCCTCAGCTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLWLFL*TLSCVQ
Trigger: TTGTACACAGCTGAGGGTGCACAAGAAGAGCCACAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTGGCAGGTCATCCTCTaGTACACCTTCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGWQVIL*YTFTVS
Trigger: GCTGACTGTGAAGGTGTACCAGAGGATGACCTGCCA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCCTGGTAACACTGTCTaGTCTGTTGGCAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGPGNTV*SVGRSS
Trigger: GGATGACCTGCCAACAGACCAGACAGTGTTACCAGG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGGTGTGCCCTGCCTCTaGTCCTCTTCAGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKGVPCL*SSSGAS
Trigger: TGAGGCACCTGAAGAGGACCAGAGGCAGGGCACACC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGGTGTGCCCTGCCTCTaGTCCTCTTCAGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYGVPCL*SSSGAS
Trigger: TGAGGCACCTGAAGAGGACCAGAGGCAGGGCACACC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGGTCAGCAATaGCCACGATTGTGGGTAACT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVCSGQQ*PRLWVT
Trigger: AGTTACCCACAATCGTGGCCATTGCTGACCAGAACA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGGAACACTGTTCTaGTCAGCAATGGCCACGATT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVHGTLF*SAMATI
Trigger: AATCGTGGCCATTGCTGACCAGAACAGTGTTCCATG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGTTCAAGGGTGGTTCTTaGACTGCAGGGCTGACCGTA +
Preference number: 4 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKFKGGS*TAGLTV
Trigger: TACGGTCAGCCCTGCAGTCCAAGAACCACCCTTGAA...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGTCTGCAGATCTTTCTTaGTGCAGGAGGGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKSADLS*CRRDLF
Trigger: AAAGAGGTCCCTCCTGCACCAAGAAAGATCTGCAGA...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTTCCATTTTCATCATaGCCACTGGCTTCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHVPFSS*PLASGV
Trigger: CACACCAGAAGCCAGTGGTCATGATGAAAATGGAAC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGTTCCATTTTCATCATaGCCACTGGCTTCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTVPFSS*PLASGV
Trigger: CACACCAGAAGCCAGTGGTCATGATGAAAATGGAAC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATGGGCCACCACCAGTaGAAACCCCATTTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHMGHHQ*KPHFVK
Trigger: CTTTACAAAATGGGGTTTTCACTGGTGGTGGCCCAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAATGGGCCACCACCAGTaGAAACCCCATTTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTMGHHQ*KPHFVK
Trigger: CTTTACAAAATGGGGTTTTCACTGGTGGTGGCCCAT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGCTTGCACCATGCCCTaGGGAGAACTGGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYACTMP*GELVAC
Trigger: ACAGGCAACCAGTTCTCCTCAGGGCATGGTGCAAGC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGGGAGTGGAGGAGGCTaGGTAGGCTGCTTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYGSGGG*VGCFRS
Trigger: TGACCTAAAGCAGCCTACTCAGCCTCCTCCACTCCC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAAGACCCAGAGTGTaGGAAGCGCTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVIRPRV*EALSTF
Trigger: AAATGTGGAAAGCGCTTCTCACACTCTGGGTCTTAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTCCCTTCTCTTTCACTaGTCCTCCCTGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGSLLFH*SSLVTL
Trigger: CAGTGTTACCAGGGAGGAGCAGTGAAAGAGAAGGGA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGTGGTCGTGTGGGACTaGCTGGTGATGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKVVVWD*LVMLKE
Trigger: CTCTTTCAGCATCACCAGGCAGTCCCACACGACCAC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCCTGGGGTTCATTTaGATTTGCAGATTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHVLGFI*ICRLRL
Trigger: CAGCCTCAATCTGCAAATGCAAATGAACCCCAGGAC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTGTGGCTCTTCTTGTaGACCCTCAGCTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLWLFL*TLSCVQ
Trigger: TTGTACACAGCTGAGGGTGCACAAGAAGAGCCACAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTCCCTCATTCTCTaGCTCTTCTACCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVFSLIL*LFYLFF
Trigger: GAAGAAGAGGTAGAAGAGGCAGAGAATGAGGGAGAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTGTATCTGTGGTCGTGTaGGACTGCCTGGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFVSVVV*DCLVML
Trigger: CAGCATCACCAGGCAGTCCCACACGACCACAGATAC...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGAGGTTCTACTTGTaGCTCTTCTTGTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTKRFYL*LFLCTL
Trigger: GAGGGTGCACAAGAAGAGCCACAAGTAGAACCTCTT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGGGGTTGGCACTTGGTaGGATTACATTTACAACTGG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTGVGTW*DYIYNW
Trigger: CCAGTTGTAAATGTAATCCCACCAAGTGCCAACCCC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGACGATTGTGGGTAACTaGGCAGTGACTGTAGGTATA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVTIVGN*AVTVGI
Trigger: TATACCTACAGTCACTGCCCAGTTACCCACAATCGT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTGTTCTGGTCAGCAATaGCCACGATTGTGGGTAACT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHCSGQQ*PRLWVT
Trigger: AGTTACCCACAATCGTGGCCATTGCTGACCAGAACA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCATGGAACACTGTTCTaGTCAGCAATGGCCACGATT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHHGTLF*SAMATI
Trigger: AATCGTGGCCATTGCTGACCAGAACAGTGTTCCATG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGAATCGTTTGCTTATTaGCAGCTAGCGCTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTESFAY*QLALLS
Trigger: GCTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTGCCTCAGGAAAAATaGCAGCAGTGTCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHVPQEK*QQCLVV
Trigger: AACAACAAGACACTGCTGTCATTTTTCCTGAGGCAC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGCACACTCAGTGCATTTaGATTTACGATTACACCCAG +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKHTQCI*IYDYTQ
Trigger: CTGGGTGTAATCGTAAATTCAAATGCACTGAGTGTG...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGATGGGCCACCACCAGTaGAAACCCCATTTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKMGHHQ*KPHFVK
Trigger: CTTTACAAAATGGGGTTTTCACTGGTGGTGGCCCAT...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGCTTGCACCATGCCCTaGGGAGAACTGGTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSACTMP*GELVAC
Trigger: ACAGGCAACCAGTTCTCCTCAGGGCATGGTGCAAGC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGATGCAAGATTGGCTTaGTTATTCTCCAACACTTGC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVDARLA*LFSNTC
Trigger: GCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGATGCAAGATTGGCTTaGTTATTCTCCAACACTTGC +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTDARLA*LFSNTC
Trigger: GCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTCAGAAGACTGCACTaGAATCTGTCCAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFRRLH*NLSSLH
Trigger: ATGCAAGCTGGACAGATTTCAGTGCAGTCTTCTGAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTCAGAAGACTGCACTaGAATCTGTCCAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHFRRLH*NLSSLH
Trigger: ATGCAAGCTGGACAGATTTCAGTGCAGTCTTCTGAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAGGGCTGACCGTAGTTaGGTAGGTGTATGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKRADRS*VGVCHL
Trigger: CAGGTGGCATACACCTACTCAACTACGGTCAGCCCT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTGTCTTTCATCCTaGTTTCCATTTGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVSCLSS*FPFGWI
Trigger: GATCCAGCCAAATGGAAATCAGGATGAAAGACAAGA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTTCAATACCGAGGAATTaGAGGATGAAATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTSIPRN*RMKCPS
Trigger: ACTGGGACATTTCATCCTTCAATTCCTCGGTATTGA...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAATCAAATGCAGGATaGCAATGTACCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVESNAG*QCTPFH
Trigger: GTGAAATGGGGTACATTGTCATCCTGCATTTGATTC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAAACCCAGGCTTCCCTaGAATGACCTGAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGKPRLP*NDLKHE
Trigger: TTCATGCTTCAGGTCATTTCAGGGAAGCCTGGGTTT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGGTTCGCCTGCTTTCTaGGCTTACACCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSGSPAF*AYTWGH
Trigger: ATGGCCCCAGGTGTAAGCGCAGAAAGCAGGCGAACC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGCTTCTGGTGTGCCCTaGCTCTGGTCCTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSASGVP*LWSSSG
Trigger: ACCTGAAGAGGACCAGAGGCAGGGCACACCAGAAGC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGTTGGGTTCTGTATaGAAAGGTGTAACTGCACAG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVKLGSV*KGVTAQ
Trigger: CTGTGCAGTTACACCTTTGCATACAGAACCCAACTT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTAAGTTGGGTTCTGTATaGAAAGGTGTAACTGCACAG +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTKLGSV*KGVTAQ
Trigger: CTGTGCAGTTACACCTTTGCATACAGAACCCAACTT...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGTGGTCGTGTGGGACTaGCTGGTGATGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKVVVWD*LVMLKE
Trigger: CTCTTTCAGCATCACCAGGCAGTCCCACACGACCAC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCAACAGCTTGCACCATaGCCTGAGGAGAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKQQLAP*PEENWL
Trigger: CAACCAGTTCTCCTCAGGGCATGGTGCAAGCTGTTG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGATGGTTCAGAAGACTaGACTGAAATCTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTDGSED*TEICPA
Trigger: AGCTGGACAGATTTCAGTGCAGTCTTCTGAACCATC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGGGATATTTACTTTaGCTGGTTCAGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVQGYLL*LVQEKM
Trigger: CATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCCTCTTCCTGCTCTGTaGTGTCACGTTCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKPLPAL*CHVLPL
Trigger: AAGCGGAAGAACGTGACAGCACAGAGCAGGAAGAGG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTCTCCCTCATTCTCTaGCTCTTCTACCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFSLIL*LFYLFF
Trigger: GAAGAAGAGGTAGAAGAGGCAGAGAATGAGGGAGAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATACAGCACACAGGTCTTaGTTAAGGCCAAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHTAHRS*LRPKEI
Trigger: TATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGTATCTGTGGTCGTGTaGGACTGCCTGGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYVSVVV*DCLVML
Trigger: CAGCATCACCAGGCAGTCCCACACGACCACAGATAC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGTATCTGTGGTCGTGTaGGACTGCCTGGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKVSVVV*DCLVML
Trigger: CAGCATCACCAGGCAGTCCCACACGACCACAGATAC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACTTTTGCCGTATCTGTaGTCGTGTGGGACTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKLLPYL*SCGTAW
Trigger: CCAGGCAGTCCCACACGACCACAGATACGGCAAAAG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTGCCCTGAGGAGAACTaGTTGCCTGTAATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYCPEEN*LPVMGH
Trigger: GTGGCCCATTACAGGCAACCAGTTCTCCTCAGGGCA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGAAATAACAGAATaGCCACCTTGTTGTATGGGT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVAEITE*PPCCMG
Trigger: ACCCATACAACAAGGTGGCCATTCTGTTATTTCAGC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGGCTGAAATAACAGAATaGCCACCTTGTTGTATGGGT +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKAEITE*PPCCMG
Trigger: ACCCATACAACAAGGTGGCCATTCTGTTATTTCAGC...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGTGTACTACTTCTaGAACCATTGGTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVMVYYF*NHWWLI
Trigger: GATCAACCACCAATGGTTCCAGAAGTAGTACACCAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGAATCGTTTGCTTATTaGCAGCTAGCGCTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTESFAY*QLALLS
Trigger: GCTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCCTGATTTCCATTTaGCTGGATCACTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVILISI*LDHFQG
Trigger: CCCTTGAAAGTGATCCAGCCAAATGGAAATCAGGAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp GGATTTCAGGAAGAAGGAGCAACCTGTGAAGAGGTTTaGTCAACTCTGACCTCTCCAGAAACATTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: GFQEEGATCEEV*STLTSPETFSH
Trigger: GTGGCTAAATGTTTCTGGAGAGGTCAGAGTTGACAAAACCTCTTCACAGGTTGCTCCTTCTTCCTGAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp GTAGATTTACTGTGCTGTCCTGGGGTTCATTTGCATTaGCAGATTGAGGCTGATCATTGTTCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VDLLCCPGVHLH*QIEADHCSWQG
Trigger: TCCCTGCCAAGAACAATGATCAGCCTCAATCTGCAAATGCAAATGAACCCCAGGACAGCACAGTAAATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCATTTTCTGCATCTaGCTCGCATTCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLIFCI*LAFIIF
Trigger: AAAGATGATGAATGCGAGTCAGATGCAGAAAATGAG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTCTCATTTTCTGCATCTaGCTCGCATTCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTLIFCI*LAFIIF
Trigger: AAAGATGATGAATGCGAGTCAGATGCAGAAAATGAG...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTATGTGATGTCATGTaGCGTTCAAGTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLCDVM*RSSWVL
Trigger: CAGAACCCAACTTGAACGTCACATGACATCACATAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTCACATGTCTTTaGTCTCTTCCTGATTTATGT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVCVTCL*SLPDLC
Trigger: ACATAAATCAGGAAGAGATCAAAGACATGTGACGCA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGCTTACTGCTTATGTGTaGGCTATAGGAGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKLTAYV*AIGARM
Trigger: CATTCTGGCTCCTATAGCTCACACATAAGCAGTAAG...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGAACACTGAGATGTCTTaGGTCCTGTTCTTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKNTEMS*VLFLVA
Trigger: GGCGACCAAGAACAGGACTCAAGACATCTCAGTGTT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAACCACTATGGGTTTaGATTCATAATCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVQPLWV*IHNPQV
Trigger: AACCTGTGGATTATGAATTCAAACCCATAGTGGTTG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTATGGGTGAAGCATTaGTTGTTTCTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVVWVKH*LFLVLW
Trigger: CCAAAGAACAAGAAACAATCAATGCTTCACCCATAC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTGGTTGTTCCATCTTaGTCAACCAAAGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLVVPS*STKGRL
Trigger: CAGTCTTCCTTTGGTTGATCAAGATGGAACAACCAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTCTTTAAAGGTGGCTaGCTAGGAGACAAATTGCCA +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFFKGG*LGDKLP
Trigger: TGGCAATTTGTCTCCTAGTCAGCCACCTTTAAAGAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATTTACAACTGGTTCTaGGTCTGTAACACAACTGTC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVIYNWF*VCNTTV
Trigger: GACAGTTGTGTTACAGACTCAGAACCAGTTGTAAAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTCTTGTCTTTCATCCTaGTTTCCATTTGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHSCLSS*FPFGWI
Trigger: GATCCAGCCAAATGGAAATCAGGATGAAAGACAAGA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGATAAGACCCAGAGTGTaGGAAGCGCTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGIRPRV*EALSTF
Trigger: AAATGTGGAAAGCGCTTCTCACACTCTGGGTCTTAT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCCTAAGCTGCTTGCTTaGCTTTCAGCCCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYPKLLA*LSALSS
Trigger: GGATGACAGGGCTGAAAGTCAAGCAAGCAGCTTAGG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTAGGCCACACATTGGATaGAGGCGGGTTAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSRPHIG*RRVRAL
Trigger: CAAGGCTCTAACCCGCCTTCATCCAATGTGTGGCCT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATCAATACCGAGGAATTaGAGGATGAAATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTSIPRN*RMKCPS
Trigger: ACTGGGACATTTCATCCTTCAATTCCTCGGTATTGA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTCAATACCGAGGAATTaGAGGATGAAATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHSIPRN*RMKCPS
Trigger: ACTGGGACATTTCATCCTTCAATTCCTCGGTATTGA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGTTTTGTCAACTCTaGCCTCTCCAGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVRFCQL*PLQKHL
Trigger: TAAATGTTTCTGGAGAGGTCAGAGTTGACAAAACCT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGAAGGAGCAACCTGTaGAGAGGTTTTGTCAACTCT +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGRRSNL*RGFVNS
Trigger: AGAGTTGACAAAACCTCTTCACAGGTTGCTCCTTCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCACCTCCAAGAACACTaGAAAAGATCTGCAGATCTT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHHLQEH*KRSADL
Trigger: AAGATCTGCAGATCTTTTTCAGTGTTCTTGGAGGTG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGAGAACAAGGTGGCTaGCACAAACTGATCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGREQGG*HKLIKF
Trigger: GAACTTGATCAGTTTGTGTCAGCCACCTTGTTCTCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTCCCTTCTCTTTCACTaGTCCTCCCTGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKSLLFH*SSLVTL
Trigger: CAGTGTTACCAGGGAGGAGCAGTGAAAGAGAAGGGA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTCTGGTCCTCTTCAGGTaGCTCAGGAAAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFLVLFR*LRKNDS
Trigger: GCTGTCATTTTTCCTGAGGCACCTGAAGAGGACCAG...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATAAGTTGGGTTCTGTATaGAAAGGTGTAACTGCACAG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHKLGSV*KGVTAQ
Trigger: CTGTGCAGTTACACCTTTGCATACAGAACCCAACTT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGGGAAAAGCGTTTCTTaGAGTTTGGGCATTCATATG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHGKSVS*SLGIHM
Trigger: CATATGAATGCCCAAACTGCAAGAAACGCTTTTCCC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGGGAAAAGCGTTTCTTaGAGTTTGGGCATTCATATG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTGKSVS*SLGIHM
Trigger: CATATGAATGCCCAAACTGCAAGAAACGCTTTTCCC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTTTATTCTCTATCTTTTaGCGTATCTGTGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTLFSIF*RICGRV
Trigger: CACACGACCACAGATACGGCAAAAGATAGAGAATAA...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGTTCATTTGCATTTaGAGATTGAGGCTGATCATT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVGFICI*RLRLII
Trigger: AATGATCAGCCTCAATCTGCAAATGCAAATGAACCC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTAGATTTACTGTaGTGTCCTGGGGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVFVDLL*CPGVHL
Trigger: CAAATGAACCCCAGGACAGCACAGTAAATCTACAAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCCTCTTCCTGCTCTGTaGTGTCACGTTCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYPLPAL*CHVLPL
Trigger: AAGCGGAAGAACGTGACAGCACAGAGCAGGAAGAGG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGCCCTGGCACCCACGTaGTCATTCGAGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSALAPT*SFERIS
Trigger: TGAAATCCTCTCGAATGAGCACGTGGGTGCCAGGGC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCAGACCTTCAGTTTTTaGTTCTTCTCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHQTFSF*FFSLIL
Trigger: GAGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACATTGTTAGTCCCTaGAATCAGAACTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVNIVSP*NQNSMA
Trigger: TGCCATTGAGTTCTGATTGCAGGGACTAACAATGTT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGACAGCACACAGGTCTTaGTTAAGGCCAAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGTAHRS*LRPKEI
Trigger: TATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGGCCCCAGGATTTCTTaGCCTTCCTTTCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYGPRIS*PSFPVS
Trigger: TGACACAGGAAAGGAAGGGCAAGAAATCCTGGGGCC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCCTGGTAACACTGTCTaGTCTGTTGGCAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYPGNTV*SVGRSS
Trigger: GGATGACCTGCCAACAGACCAGACAGTGTTACCAGG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACCTGGTAACACTGTCTaGTCTGTTGGCAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKPGNTV*SVGRSS
Trigger: GGATGACCTGCCAACAGACCAGACAGTGTTACCAGG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGCTGAAATAACAGAATaGCCACCTTGTTGTATGGGT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHAEITE*PPCCMG
Trigger: ACCCATACAACAAGGTGGCCATTCTGTTATTTCAGC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGATCATTGTTCTTaGCAGGGATATTTACTTTGC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVADHCS*QGYLLC
Trigger: GCAAAGTAAATATCCCTGCCAAGAACAATGATCAGC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTTACTGTGCTGTCCTaGGGTTCATTTGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFTVLS*GSFAFA
Trigger: TGCAAATGCAAATGAACCCCAGGACAGCACAGTAAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTCTGGAACCATTGGTaGTTGATCCCACTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFWNHW*LIPLVK
Trigger: TTTTACCAGTGGGATCAACCACCAATGGTTCCAGAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTCTGGAACCATTGGTaGTTGATCCCACTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHFWNHW*LIPLVK
Trigger: TTTTACCAGTGGGATCAACCACCAATGGTTCCAGAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTACTTCTGGAACCATTaGTGGTTGATCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGYFWNH*WLIPLV
Trigger: TACCAGTGGGATCAACCACCAATGGTTCCAGAAGTA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATATGGGGTTGGCACTTaGTGGGATTACATTTACAAC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTYGVGT*WDYIYN
Trigger: GTTGTAAATGTAATCCCACCAAGTGCCAACCCCATA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTATGGGGTTGGCACTTaGTGGGATTACATTTACAAC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHYGVGT*WDYIYN
Trigger: GTTGTAAATGTAATCCCACCAAGTGCCAACCCCATA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCGATATTTATGGGGTTaGCACTTGGTGGGATTACAT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHRYLWG*HLVGLH
Trigger: ATGTAATCCCACCAAGTGCCAACCCCATAAATATCG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGACGATTGTGGGTAACTaGGCAGTGACTGTAGGTATA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGTIVGN*AVTVGI
Trigger: TATACCTACAGTCACTGCCCAGTTACCCACAATCGT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAACATGGAACACTGTTCTaGTCAGCAATGGCCACGATT +
Preference number: 4 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSEHGTLF*SAMATI
Trigger: AATCGTGGCCATTGCTGACCAGAACAGTGTTCCATG...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGAATCGTTTGCTTATTaGCAGCTAGCGCTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGESFAY*QLALLS
Trigger: GCTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTCAAGGGTGGTTCTTaGACTGCAGGGCTGACCGTA +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYFKGGS*TAGLTV
Trigger: TACGGTCAGCCCTGCAGTCCAAGAACCACCCTTGAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATCCTGATTTCCATTTaGCTGGATCACTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHILISI*LDHFQG
Trigger: CCCTTGAAAGTGATCCAGCCAAATGGAAATCAGGAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTGAAAATACTGAGAAATaGCACTTACAGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTENTEK*HLQHTG
Trigger: ACCTGTGTGCTGTAAGTGCCATTTCTCAGTATTTTC...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGGCAACAGCTCAATATaGAACACACACTATTTGACG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHGNSSI*NTHYLT
Trigger: CGTCAAATAGTGTGTGTTCCATATTGAGCTGTTGCC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446923.7
3UTR CAA 72 bp TACTGTGCTGTCCTGGGGTTCATTTGCATTTGCAGATaGAGGCTGATCATTGTTCTTGGCAGGGATATTTAC +
Preference number: 4 (lower is better)
Translates to: YCAVLGFICICR*RLIIVLGRDIY
Trigger: GTAAATATCCCTGCCAAGAACAATGATCAGCCTCAATCTGCAAATGCAAATGAACCCCAGGACAGCACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 72 bp TGGGCAGTGACTGTAGGTATAGCGATATTTATGGGGTaGGCACTTGGTGGGATTACATTTACAACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: WAVTVGIAIFMG*ALGGITFTTGS
Trigger: AGAACCAGTTGTAAATGTAATCCCACCAAGTGCCAACCCCATAAATATCGCTATACCTACAGTCACTGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCTCATTTTCTGCATCTaGCTCGCATTCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLIFCI*LAFIIF
Trigger: AAAGATGATGAATGCGAGTCAGATGCAGAAAATGAG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTTATGTGATGTCATGTaGCGTTCAAGTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLCDVM*RSSWVL
Trigger: CAGAACCCAACTTGAACGTCACATGACATCACATAA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGACGGTGAAGAACACTaGGATGTCTTGAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKDGEEH*DVLSPV
Trigger: AACAGGACTCAAGACATCTCAGTGTTCTTCACCGTC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATACCTTGTTGTATGGGTaGAGCATTGATTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHTLLYG*SIDCFL
Trigger: CAAGAAACAATCAATGCTTCACCCATACAACAAGGT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTTGGTTGTTCCATCTTaGTCAACCAAAGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLVVPS*STKGRL
Trigger: CAGTCTTCCTTTGGTTGATCAAGATGGAACAACCAA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTTCTTTAAAGGTGGCTaGCTAGGAGACAAATTGCCA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGFFKGG*LGDKLP
Trigger: TGGCAATTTGTCTCCTAGTCAGCCACCTTTAAAGAA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAATTTACAACTGGTTCTaGGTCTGTAACACAACTGTC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTIYNWF*VCNTTV
Trigger: GACAGTTGTGTTACAGACTCAGAACCAGTTGTAAAT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATTTACAACTGGTTCTaGGTCTGTAACACAACTGTC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHIYNWF*VCNTTV
Trigger: GACAGTTGTGTTACAGACTCAGAACCAGTTGTAAAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAATCAGAGTCATTCTaGTCCTCTACATTTGATACT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVESESF*SSTFDT
Trigger: AGTATCAAATGTAGAGGATCAGAATGACTCTGATTC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTAAACCCAGGCTTCCCTaGAATGACCTGAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFKPRLP*NDLKHE
Trigger: TTCATGCTTCAGGTCATTTCAGGGAAGCCTGGGTTT...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGTTTAAGGTTGTCCATTaGCTTCCTTTTGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKFKVVH*LPFDSH
Trigger: GTGACTATCAAAAGGAAGTCAATGGACAACCTTAAA...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGGATCATGGTTTTaGTCATTTTCTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLGSWF*SFSASD
Trigger: GTCAGATGCAGAAAATGAGCAAAACCATGATCCTAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACTGGTCCTCTTCAGGTaGCTCAGGAAAAATGACAGC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKLVLFR*LRKNDS
Trigger: GCTGTCATTTTTCCTGAGGCACCTGAAGAGGACCAG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTATTCTCTATCTTTTaGCGTATCTGTGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLFSIF*RICGRV
Trigger: CACACGACCACAGATACGGCAAAAGATAGAGAATAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCAACAGCTTGCACCATaGCCTGAGGAGAACTGGTTG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSQQLAP*PEENWL
Trigger: CAACCAGTTCTCCTCAGGGCATGGTGCAAGCTGTTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTGCACTTGGTTGTaGATTCAAAGCATAATATGC +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVFCTWL*IQSIIC
Trigger: GCATATTATGCTTTGAATGCACAACCAAGTGCAGAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAATCTGTCCAGCTTaGATCTTTTCAAACCACTTT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVEICPA*IFSNHF
Trigger: AAAGTGGTTTGAAAAGATGCAAGCTGGACAGATTTC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCAGGGATATTTACTTTaGCTGGTTCAGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGQGYLL*LVQEKM
Trigger: CATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGGGTTCATTTGCATTTaGAGATTGAGGCTGATCATT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTGFICI*RLRLII
Trigger: AATGATCAGCCTCAATCTGCAAATGCAAATGAACCC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTTGTAGATTTACTGTaGTGTCCTGGGGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFVDLL*CPGVHL
Trigger: CAAATGAACCCCAGGACAGCACAGTAAATCTACAAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCAGACCTTCAGTTTTTaGTTCTTCTCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGQTFSF*FFSLIL
Trigger: GAGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCACTGTCTGGTCTGTTaGCAGGTCATCCTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSHCLVC*QVILWY
Trigger: GTACCAGAGGATGACCTGCCAACAGACCAGACAGTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGATATTTACTTTGCCTaGTTCAGGAGAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHDIYFA*FRRRWF
Trigger: GAACCATCTTCTCCTGAACCAGGCAAAGTAAATATC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGATATTTACTTTGCCTaGTTCAGGAGAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTDIYFA*FRRRWF
Trigger: GAACCATCTTCTCCTGAACCAGGCAAAGTAAATATC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTTTACTGTGCTGTCCTaGGGTTCATTTGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGFTVLS*GSFAFA
Trigger: TGCAAATGCAAATGAACCCCAGGACAGCACAGTAAA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTATGGGGTTGGCACTTaGTGGGATTACATTTACAAC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGYGVGT*WDYIYN
Trigger: GTTGTAAATGTAATCCCACCAAGTGCCAACCCCATA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGAAAATACTGAGAAATaGCACTTACAGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTENTEK*HLQHTG
Trigger: ACCTGTGTGCTGTAAGTGCCATTTCTCAGTATTTTC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp GACTTTGTAGATTTACTGTGCTGTCCTGGGGTTCATTaGCATTTGCAGATTGAGGCTGATCATTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DFVDLLCCPGVH*HLQIEADHCSW
Trigger: CCAAGAACAATGATCAGCCTCAATCTGCAAATGCAAATGAACCCCAGGACAGCACAGTAAATCTACAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGTGCCTCAGGAAAAATaGCAGCAGTGTCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKVPQEK*QQCLVV
Trigger: AACAACAAGACACTGCTGTCATTTTTCCTGAGGCAC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTGCGTCACATGTCTTTaGTCTCTTCCTGATTTATGT +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGCVTCL*SLPDLC
Trigger: ACATAAATCAGGAAGAGATCAAAGACATGTGACGCA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCTTACTGCTTATGTGTaGGCTATAGGAGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLTAYV*AIGARM
Trigger: CATTCTGGCTCCTATAGCTCACACATAAGCAGTAAG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTAACACTGAGATGTCTTaGGTCCTGTTCTTGGTCGCC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSNTEMS*VLFLVA
Trigger: GGCGACCAAGAACAGGACTCAAGACATCTCAGTGTT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGACGGTGAAGAACACTaGGATGTCTTGAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYDGEEH*DVLSPV
Trigger: AACAGGACTCAAGACATCTCAGTGTTCTTCACCGTC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATATGGGCCACCACCAGTaGAAACCCCATTTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYMGHHQ*KPHFVK
Trigger: CTTTACAAAATGGGGTTTTCACTGGTGGTGGCCCAT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGTATGGGTGAAGCATTaGTTGTTTCTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGVWVKH*LFLVLW
Trigger: CCAAAGAACAAGAAACAATCAATGCTTCACCCATAC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGACCTTGTTGTATGGGTaGAGCATTGATTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGTLLYG*SIDCFL
Trigger: CAAGAAACAATCAATGCTTCACCCATACAACAAGGT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGAATCAGAGTCATTCTaGTCCTCTACATTTGATACT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTESESF*SSTFDT
Trigger: AGTATCAAATGTAGAGGATCAGAATGACTCTGATTC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGATAAGACCCAGAGTGTaGGAAGCGCTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKIRPRV*EALSTF
Trigger: AAATGTGGAAAGCGCTTCTCACACTCTGGGTCTTAT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACATTATACTTCTCTGTaGAGGGAATTTTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTHYTSL*REFCSA
Trigger: TGCACTACAAAATTCCCTTCACAGAGAAGTATAATG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCAGAAGTGCAGGAGCTaGGAGTCAGAAAGGCATCTA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSQKCRS*ESERHL
Trigger: TAGATGCCTTTCTGACTCTCAGCTCCTGCACTTCTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGTGGCTGACACAAACTaGTCAAGTTCTCACACCCCA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSVADTN*SSSHTP
Trigger: TGGGGTGTGAGAACTTGATCAGTTTGTGTCAGCCAC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTCTGCACTTGGTTGTaGATTCAAAGCATAATATGC +
Preference number: 4 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHFCTWL*IQSIIC
Trigger: GCATATTATGCTTTGAATGCACAACCAAGTGCAGAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTCTGCACTTGGTTGTaGATTCAAAGCATAATATGC +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFCTWL*IQSIIC
Trigger: GCATATTATGCTTTGAATGCACAACCAAGTGCAGAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGAAATCTGTCCAGCTTaGATCTTTTCAAACCACTTT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTEICPA*IFSNHF
Trigger: AAAGTGGTTTGAAAAGATGCAAGCTGGACAGATTTC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGTCCTGGGGTTCATTTaGATTTGCAGATTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKVLGFI*ICRLRL
Trigger: CAGCCTCAATCTGCAAATGCAAATGAACCCCAGGAC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTTCTCCCTCATTCTCTaGCTCTTCTACCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKFSLIL*LFYLFF
Trigger: GAAGAAGAGGTAGAAGAGGCAGAGAATGAGGGAGAA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTTCTTCTATCAGCTaGTTTCTTAAGGCTAACAAT +
Preference number: 4 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVSSSIS*FLKANN
Trigger: ATTGTTAGCCTTAAGAAAGCAGCTGATAGAAGAACT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCACCAAACCAACTGTTaGCAGAACAACAGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYHQTNC*QNNSLH
Trigger: GTGCAAGCTGTTGTTCTGCCAACAGTTGGTTTGGTG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACACCAAACCAACTGTTaGCAGAACAACAGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKHQTNC*QNNSLH
Trigger: GTGCAAGCTGTTGTTCTGCCAACAGTTGGTTTGGTG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGCTGATCATTGTTCTTaGCAGGGATATTTACTTTGC +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGADHCS*QGYLLC
Trigger: GCAAAGTAAATATCCCTGCCAAGAACAATGATCAGC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTTACTTCTGGAACCATTaGTGGTTGATCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFYFWNH*WLIPLV
Trigger: TACCAGTGGGATCAACCACCAATGGTTCCAGAAGTA...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAAGAGGTTCTACTTGTaGCTCTTCTTGTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKKRFYL*LFLCTL
Trigger: GAGGGTGCACAAGAAGAGCCACAAGTAGAACCTCTT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACATGGAACACTGTTCTaGTCAGCAATGGCCACGATT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKHGTLF*SAMATI
Trigger: AATCGTGGCCATTGCTGACCAGAACAGTGTTCCATG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp AAAATACTGAGAAATGGCACTTACAGCACACAGGTCTaGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: KILRNGTYSTQV*LKAKGDTKLHV
Trigger: GACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320985.14
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp CTACATCCAGTGGTAGGTTTACTGAATCAGCAATTTTaGAGAGCTCTTCTGCACTTGGTTGTGCATTCAAAG +
Preference number: 4 (lower is better)
Translates to: LHPVVGLLNQQF*RALLHLVVHSK
Trigger: CTTTGAATGCACAACCAAGTGCAGAAGAGCTCTCAAAAATTGCTGATTCAGTAAACCTACCACTGGATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGTGCCTCAGGAAAAATaGCAGCAGTGTCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYVPQEK*QQCLVV
Trigger: AACAACAAGACACTGCTGTCATTTTTCCTGAGGCAC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGGTTCCATTTTCATCATaGCCACTGGCTTCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVVPFSS*PLASGV
Trigger: CACACCAGAAGCCAGTGGTCATGATGAAAATGGAAC...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCACACTCAGTGCATTTaGATTTACGATTACACCCAG +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKHTQCI*IYDYTQ
Trigger: CTGGGTGTAATCGTAAATTCAAATGCACTGAGTGTG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCTTACTGCTTATGTGTaGGCTATAGGAGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLTAYV*AIGARM
Trigger: CATTCTGGCTCCTATAGCTCACACATAAGCAGTAAG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACTTACTGCTTATGTGTaGGCTATAGGAGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKLTAYV*AIGARM
Trigger: CATTCTGGCTCCTATAGCTCACACATAAGCAGTAAG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGACGGTGAAGAACACTaGGATGTCTTGAGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSDGEEH*DVLSPV
Trigger: AACAGGACTCAAGACATCTCAGTGTTCTTCACCGTC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTTGGTTGTTCCATCTTaGTCAACCAAAGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLVVPS*STKGRL
Trigger: CAGTCTTCCTTTGGTTGATCAAGATGGAACAACCAA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAATTCAGAAGACTGCACTaGAATCTGTCCAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKFRRLH*NLSSLH
Trigger: ATGCAAGCTGGACAGATTTCAGTGCAGTCTTCTGAA...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGCATTATACTTCTCTGTaGAGGGAATTTTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKHYTSL*REFCSA
Trigger: TGCACTACAAAATTCCCTTCACAGAGAAGTATAATG...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAGAAGGAGCAACCTGTaGAGAGGTTTTGTCAACTCT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKRRSNL*RGFVNS
Trigger: AGAGTTGACAAAACCTCTTCACAGGTTGCTCCTTCT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTAAACCCAGGCTTCCCTaGAATGACCTGAAGCATGAA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSKPRLP*NDLKHE
Trigger: TTCATGCTTCAGGTCATTTCAGGGAAGCCTGGGTTT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTGTTGAGAATTTAAACTaGAAACGTTATTGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFVENLN*KRYCAA
Trigger: CGCGGCGCAATAACGTTTTCAGTTTAAATTCTCAAC...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGATGGTTCAGAAGACTaGACTGAAATCTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYDGSED*TEICPA
Trigger: AGCTGGACAGATTTCAGTGCAGTCTTCTGAACCATC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGATGGTTCAGAAGACTaGACTGAAATCTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKDGSED*TEICPA
Trigger: AGCTGGACAGATTTCAGTGCAGTCTTCTGAACCATC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGTCCTGGGGTTCATTTaGATTTGCAGATTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSVLGFI*ICRLRL
Trigger: CAGCCTCAATCTGCAAATGCAAATGAACCCCAGGAC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTGTGGCTCTTCTTGTaGACCCTCAGCTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSLWLFL*TLSCVQ
Trigger: TTGTACACAGCTGAGGGTGCACAAGAAGAGCCACAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGTTGTGGCTCTTCTTGTaGACCCTCAGCTGTGTACAA +
Preference number: 4 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVLWLFL*TLSCVQ
Trigger: TTGTACACAGCTGAGGGTGCACAAGAAGAGCCACAA...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAATTCTCCCTCATTCTCTaGCTCTTCTACCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKFSLIL*LFYLFF
Trigger: GAAGAAGAGGTAGAAGAGGCAGAGAATGAGGGAGAA...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATACAGCACACAGGTCTTaGTTAAGGCCAAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYTAHRS*LRPKEI
Trigger: TATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATGCAGGAGAACCAATTaGATCTCTACTTTAAATCTT +
Preference number: 4 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTCRRTN*ISTLNL
Trigger: AAGATTTAAAGTAGAGATGCAATTGGTTCTCCTGCA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGCACCAAACCAACTGTTaGCAGAACAACAGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVHQTNC*QNNSLH
Trigger: GTGCAAGCTGTTGTTCTGCCAACAGTTGGTTTGGTG...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCACCAAACCAACTGTTaGCAGAACAACAGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSHQTNC*QNNSLH
Trigger: GTGCAAGCTGTTGTTCTGCCAACAGTTGGTTTGGTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAATACTTCTGGAACCATTaGTGGTTGATCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKYFWNH*WLIPLV
Trigger: TACCAGTGGGATCAACCACCAATGGTTCCAGAAGTA...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGATGGTGTACTACTTCTaGAACCATTGGTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKMVYYF*NHWWLI
Trigger: GATCAACCACCAATGGTTCCAGAAGTAGTACACCAT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGGGGTTGGCACTTGGTaGGATTACATTTACAACTGG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSGVGTW*DYIYNW
Trigger: CCAGTTGTAAATGTAATCCCACCAAGTGCCAACCCC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGGGGGTTGGCACTTGGTaGGATTACATTTACAACTGG +
Preference number: 4 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVGVGTW*DYIYNW
Trigger: CCAGTTGTAAATGTAATCCCACCAAGTGCCAACCCC...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATACGATTGTGGGTAACTaGGCAGTGACTGTAGGTATA +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYTIVGN*AVTVGI
Trigger: TATACCTACAGTCACTGCCCAGTTACCCACAATCGT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTGTTCTGGTCAGCAATaGCCACGATTGTGGGTAACT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSCSGQQ*PRLWVT
Trigger: AGTTACCCACAATCGTGGCCATTGCTGACCAGAACA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGTAGTTAGCACGGGTTaGAACTACATTATACTTCTC +
Preference number: 4 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSEVVSTG*NYIILL
Trigger: GAGAAGTATAATGTAGTTCCAACCCGTGCTAACTAC...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGATCATGTCTTCAGATaGGAGTTTTCGGCCAATTGC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYDHVFR*EFSANC
Trigger: GCAATTGGCCGAAAACTCCCATCTGAAGACATGATC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCTCATTTTCTGCATCTaGCTCGCATTCATCATCTTT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLIFCI*LAFIIF
Trigger: AAAGATGATGAATGCGAGTCAGATGCAGAAAATGAG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGGTGCCTCAGGAAAAATaGCAGCAGTGTCTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVVPQEK*QQCLVV
Trigger: AACAACAAGACACTGCTGTCATTTTTCCTGAGGCAC...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCACACTCAGTGCATTTaGATTTACGATTACACCCAG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYHTQCI*IYDYTQ
Trigger: CTGGGTGTAATCGTAAATTCAAATGCACTGAGTGTG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGATGCAAGATTGGCTTaGTTATTCTCCAACACTTGC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKDARLA*LFSNTC
Trigger: GCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTCTTGTCTTTCATCCTaGTTTCCATTTGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYSCLSS*FPFGWI
Trigger: GATCCAGCCAAATGGAAATCAGGATGAAAGACAAGA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGAATCAAATGCAGGATaGCAATGTACCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKESNAG*QCTPFH
Trigger: GTGAAATGGGGTACATTGTCATCCTGCATTTGATTC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAAGTTGGGTTCTGTATaGAAAGGTGTAACTGCACAG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKKLGSV*KGVTAQ
Trigger: CTGTGCAGTTACACCTTTGCATACAGAACCCAACTT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGGGAAAAGCGTTTCTTaGAGTTTGGGCATTCATATG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYGKSVS*SLGIHM
Trigger: CATATGAATGCCCAAACTGCAAGAAACGCTTTTCCC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGGGTTCATTTGCATTTaGAGATTGAGGCTGATCATT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKGFICI*RLRLII
Trigger: AATGATCAGCCTCAATCTGCAAATGCAAATGAACCC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGGTTTTCTAATCTGCTaGATGTTACAAACTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSEGFLIC*MLQTCS
Trigger: GGAACAAGTTTGTAACATGCAGCAGATTAGAAAACC...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGAACATTGTTAGTCCCTaGAATCAGAACTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKNIVSP*NQNSMA
Trigger: TGCCATTGAGTTCTGATTGCAGGGACTAACAATGTT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTCAACATTAGGATCATaGTTTTGCTCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGSTLGS*FCSFSA
Trigger: TGCAGAAAATGAGCAAAACCATGATCCTAATGTTGA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGATATTTACTTTGCCTaGTTCAGGAGAAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKDIYFA*FRRRWF
Trigger: GAACCATCTTCTCCTGAACCAGGCAAAGTAAATATC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGCTGATCATTGTTCTTaGCAGGGATATTTACTTTGC +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKADHCS*QGYLLC
Trigger: GCAAAGTAAATATCCCTGCCAAGAACAATGATCAGC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTCTGGAACCATTGGTaGTTGATCCCACTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYFWNHW*LIPLVK
Trigger: TTTTACCAGTGGGATCAACCACCAATGGTTCCAGAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTATGGGGTTGGCACTTaGTGGGATTACATTTACAAC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYYGVGT*WDYIYN
Trigger: GTTGTAAATGTAATCCCACCAAGTGCCAACCCCATA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCGATATTTATGGGGTTaGCACTTGGTGGGATTACAT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYRYLWG*HLVGLH
Trigger: ATGTAATCCCACCAAGTGCCAACCCCATAAATATCG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACGATATTTATGGGGTTaGCACTTGGTGGGATTACAT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKRYLWG*HLVGLH
Trigger: ATGTAATCCCACCAAGTGCCAACCCCATAAATATCG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTGCGTCACATGTCTTTaGTCTCTTCCTGATTTATGT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYCVTCL*SLPDLC
Trigger: ACATAAATCAGGAAGAGATCAAAGACATGTGACGCA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCACACTCAGTGCATTTaGATTTACGATTACACCCAG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSHTQCI*IYDYTQ
Trigger: CTGGGTGTAATCGTAAATTCAAATGCACTGAGTGTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACAACCACTATGGGTTTaGATTCATAATCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKQPLWV*IHNPQV
Trigger: AACCTGTGGATTATGAATTCAAACCCATAGTGGTTG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGATGCAAGATTGGCTTaGTTATTCTCCAACACTTGC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSDARLA*LFSNTC
Trigger: GCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAACCTTGTTGTATGGGTaGAGCATTGATTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKTLLYG*SIDCFL
Trigger: CAAGAAACAATCAATGCTTCACCCATACAACAAGGT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATACCTTGTTGTATGGGTaGAGCATTGATTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYTLLYG*SIDCFL
Trigger: CAAGAAACAATCAATGCTTCACCCATACAACAAGGT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTCTTTAAAGGTGGCTaGCTAGGAGACAAATTGCCA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSFFKGG*LGDKLP
Trigger: TGGCAATTTGTCTCCTAGTCAGCCACCTTTAAAGAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTCAATACCGAGGAATTaGAGGATGAAATGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSSIPRN*RMKCPS
Trigger: ACTGGGACATTTCATCCTTCAATTCCTCGGTATTGA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAGGTTTTGTCAACTCTaGCCTCTCCAGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKRFCQL*PLQKHL
Trigger: TAAATGTTTCTGGAGAGGTCAGAGTTGACAAAACCT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTTAGGATCATGGTTTTaGTCATTTTCTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLGSWF*SFSASD
Trigger: GTCAGATGCAGAAAATGAGCAAAACCATGATCCTAA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTATTCTCTATCTTTTaGCGTATCTGTGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLFSIF*RICGRV
Trigger: CACACGACCACAGATACGGCAAAAGATAGAGAATAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAATTATTCTCTATCTTTTaGCGTATCTGTGGTCGTGTG +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKLFSIF*RICGRV
Trigger: CACACGACCACAGATACGGCAAAAGATAGAGAATAA...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGAAATCTGTCCAGCTTaGATCTTTTCAAACCACTTT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKEICPA*IFSNHF
Trigger: AAAGTGGTTTGAAAAGATGCAAGCTGGACAGATTTC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCAGGGATATTTACTTTaGCTGGTTCAGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSQGYLL*LVQEKM
Trigger: CATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGGGTTCATTTGCATTTaGAGATTGAGGCTGATCATT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYGFICI*RLRLII
Trigger: AATGATCAGCCTCAATCTGCAAATGCAAATGAACCC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCAGACCTTCAGTTTTTaGTTCTTCTCCCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSQTFSF*FFSLIL
Trigger: GAGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAATTGCAATAGCCTATaGTCCACTCCTTGCTATAAC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKNCNSL*STPCYN
Trigger: GTTATAGCAAGGAGTGGAGCATAGGCTATTGCAATT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGCTGATCATTGTTCTTaGCAGGGATATTTACTTTGC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYADHCS*QGYLLC
Trigger: GCAAAGTAAATATCCCTGCCAAGAACAATGATCAGC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTTACTGTGCTGTCCTaGGGTTCATTTGCATTTGCA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSFTVLS*GSFAFA
Trigger: TGCAAATGCAAATGAACCCCAGGACAGCACAGTAAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGTTCTGGAACCATTGGTaGTTGATCCCACTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVFWNHW*LIPLVK
Trigger: TTTTACCAGTGGGATCAACCACCAATGGTTCCAGAA...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTATGGTGTACTACTTCTaGAACCATTGGTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSMVYYF*NHWWLI
Trigger: GATCAACCACCAATGGTTCCAGAAGTAGTACACCAT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCGATATTTATGGGGTTaGCACTTGGTGGGATTACAT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSRYLWG*HLVGLH
Trigger: ATGTAATCCCACCAAGTGCCAACCCCATAAATATCG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTATCCTGATTTCCATTTaGCTGGATCACTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSILISI*LDHFQG
Trigger: CCCTTGAAAGTGATCCAGCCAAATGGAAATCAGGAT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTATATTCCTCTTGTGGTaGAAGTTTAAGGTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFIFLLW*KFKVVH
Trigger: ATGGACAACCTTAAACTTCCACCACAAGAGGAATAT...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 72 bp TTTGGATGCAAGATTGGCTTGATTATTCTCCAACACTaGCCTTATTACATTACCATCTACCGCCACTTTAAG +
Preference number: 4 (lower is better)
Translates to: FGCKIGLIILQH*PYYITIYRHFK
Trigger: CTTAAAGTGGCGGTAGATGGTAATGTAATAAGGCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCAACCACTATGGGTTTaGATTCATAATCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSQPLWV*IHNPQV
Trigger: AACCTGTGGATTATGAATTCAAACCCATAGTGGTTG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGGTATGGGTGAAGCATTaGTTGTTTCTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVVWVKH*LFLVLW
Trigger: CCAAAGAACAAGAAACAATCAATGCTTCACCCATAC...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTATTTACAACTGGTTCTaGGTCTGTAACACAACTGTC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSIYNWF*VCNTTV
Trigger: GACAGTTGTGTTACAGACTCAGAACCAGTTGTAAAT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGAATCAGAGTCATTCTaGTCCTCTACATTTGATACT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYESESF*SSTFDT
Trigger: AGTATCAAATGTAGAGGATCAGAATGACTCTGATTC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACATTATACTTCTCTGTaGAGGGAATTTTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKHYTSL*REFCSA
Trigger: TGCACTACAAAATTCCCTTCACAGAGAAGTATAATG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTAGGTTTTGTCAACTCTaGCCTCTCCAGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSRFCQL*PLQKHL
Trigger: TAAATGTTTCTGGAGAGGTCAGAGTTGACAAAACCT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR TCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATAGCCAAATCACAAAATaGCATTTGGATGATCATGTC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYSQITK*HLDDHV
Trigger: GACATGATCATCCAAATGTCATTTTGTGATTTGGCT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR TCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGTCATCTCTCCACAATaGGAATACCAAAATACCTTT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKVISPQ*EYQNTF
Trigger: AAAGGTATTTTGGTATTCTCATTGTGGAGAGATGAC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTAGGATCATGGTTTTaGTCATTTTCTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLGSWF*SFSASD
Trigger: GTCAGATGCAGAAAATGAGCAAAACCATGATCCTAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTCTGCACTTGGTTGTaGATTCAAAGCATAATATGC +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYFCTWL*IQSIIC
Trigger: GCATATTATGCTTTGAATGCACAACCAAGTGCAGAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGAAATCTGTCCAGCTTaGATCTTTTCAAACCACTTT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKEICPA*IFSNHF
Trigger: AAAGTGGTTTGAAAAGATGCAAGCTGGACAGATTTC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTTGTAGATTTACTGTaGTGTCCTGGGGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSFVDLL*CPGVHL
Trigger: CAAATGAACCCCAGGACAGCACAGTAAATCTACAAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGGTTTTCTAATCTGCTaGATGTTACAAACTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKGFLIC*MLQTCS
Trigger: GGAACAAGTTTGTAACATGCAGCAGATTAGAAAACC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGAGTTCTTCTATCAGCTaGTTTCTTAAGGCTAACAAT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKSSSIS*FLKANN
Trigger: ATTGTTAGCCTTAAGAAAGCAGCTGATAGAAGAACT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTAACATTGTTAGTCCCTaGAATCAGAACTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSNIVSP*NQNSMA
Trigger: TGCCATTGAGTTCTGATTGCAGGGACTAACAATGTT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTTGTTTCTTGTTCTTTaGATGCAAGATTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLFLVL*MQDWLD
Trigger: ATCAAGCCAATCTTGCATCCAAAGAACAAGAAACAA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGTAGTTAGCACGGGTTaGAACTACATTATACTTCTC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSVVSTG*NYIILL
Trigger: GAGAAGTATAATGTAGTTCCAACCCGTGCTAACTAC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGAAAATACTGAGAAATaGCACTTACAGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSENTEK*HLQHTG
Trigger: ACCTGTGTGCTGTAAGTGCCATTTCTCAGTATTTTC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp GATAATGATGAAAAGAATGACAGCAGTTCAGGCTTGTaGATGCATTTTATTGTGAGATGGGAGTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: DNDEKNDSSSGL*MHFIVRWESGK
Trigger: TTTACCAGACTCCCATCTCACAATAAAATGCATCAACAAGCCTGAACTGCTGTCATTCTTTTCATCATTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361642.9
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTAGGATCATGGTTTTaGTCATTTTCTGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSLGSWF*SFSASD
Trigger: GTCAGATGCAGAAAATGAGCAAAACCATGATCCTAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAGTTCTTCTATCAGCTaGTTTCTTAAGGCTAACAAT +
Preference number: 4 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKSSSIS*FLKANN
Trigger: ATTGTTAGCCTTAAGAAAGCAGCTGATAGAAGAACT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTGTTTCTTGTTCTTTaGATGCAAGATTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLFLVL*MQDWLD
Trigger: ATCAAGCCAATCTTGCATCCAAAGAACAAGAAACAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR GCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTGCAGGAGAACCAATTaGATCTCTACTTTAAATCTT +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSCRRTN*ISTLNL
Trigger: AAGATTTAAAGTAGAGATGCAATTGGTTCTCCTGCA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CCA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTCAACATTAGGATCATaGTTTTGCTCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QHKINTEELKDEMSQCFSSTLGS*FCSFSA
Trigger: TGCAGAAAATGAGCAAAACCATGATCCTAATGTTGA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
3UTR CAA 72 bp TTACTGAATCAGCAATTTTTGAGAGCTCTTCTGCACTaGGTTGTGCATTCAAAGCATAATATGCTTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LLNQQFLRALLH*VVHSKHNMLLG
Trigger: TCCTAAAAGCATATTATGCTTTGAATGCACAACCAAGTGCAGAAGAGCTCTCAAAAATTGCTGATTCAGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
3UTR CAA 72 bp ATTGATTGTTTCTTGTTCTTTGGATGCAAGATTGGCTaGATTATTCTCCAACACTTGCCTTATTACATTACC +
Preference number: 4 (lower is better)
Translates to: IDCFLFFGCKIG*IILQHLPYYIT
Trigger: GGTAATGTAATAAGGCAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCCAAAGAACAAGAAACAATCAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS GCA 90 bp GGCTCGGCGGCGTCCTGCCTCCGCGCTGGCCACACCCGCCGCGGCTaGCCGGGGCAGGGAGGGATCTGGCTGATTCTCCCTGTACCCTGT +
Preference number: 5 (lower is better)
Translates to: GSAASCLRAGHTRRG*PGQGGIWLILPVPC
Trigger: ACAGGGTACAGGGAGAATCAGCCAGATCCCTCCCTGCCCCGGGCAGCCGCGGCGGGTGTGGCCAGCGCGGAGGCAGGACGCCGCCGAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560196.5
CDS GCA 90 bp GGCTGTCGGAGTTGGAAAGGTAAAGTTGGAGGCTCGGCGGCGTCCTaGCTCCGCGCTGGCCACACCCGCCGCGGCTGCCCGGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GCRSWKGKVGGSAAS*LRAGHTRRGCPGQG
Trigger: TCCCTGCCCCGGGCAGCCGCGGCGGGTGTGGCCAGCGCGGAGGCAGGACGCCGCCGAGCCTCCAACTTTACCTTTCCAACTCCGACAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542879.5
ENST00000560196.5
CDS CCA 90 bp GGAAACCGTAGGGACGCGGTCAGAAAGGCGACGGGCTGTCGGAGTTaGAAAGGTAAAGTTGGAGGCTCGGCGGCGTCCTGCCTCCGCGCT +
Preference number: 5 (lower is better)
Translates to: GNRRDAVRKATGCRS*KGKVGGSAASCLRA
Trigger: AGCGCGGAGGCAGGACGCCGCCGAGCCTCCAACTTTACCTTTCCAACTCCGACAGCCCGTCGCCTTTCTGACCGCGTCCCTACGGTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542879.5
ENST00000560196.5
ENST00000561304.5
CDS TCA 90 bp GCGGGTTCGCCTGCTTTCTGCGCTTACACCTGGGGCCATCCGCCATaGTCCTCTCGCTTGTGTCTAAATGCTCGAGTCACCTCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AGSPAFCAYTWGHPP*SSRLCLNARVTSSP
Trigger: GGGGGAGGAGGTGACTCGAGCATTTAGACACAAGCGAGAGGATCATGGCGGATGGCCCCAGGTGTAAGCGCAGAAAGCAGGCGAACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320985.14
CDS-3UTR CAA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAAGGAACAACTTGAAGTaGGCTAGGCTGCTCAAGACT +
Preference number: 5 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPRNNLK*ARLLKT
Trigger: AGTCTTGAGCAGCCTAGCCAACTTCAAGTTGTTCCT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAAGAGCTCTTCTGCACTaGGTTGTGCATTCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPRALLH*VVHSKH
Trigger: ATGCTTTGAATGCACAACCAAGTGCAGAAGAGCTCT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCATTTGTGGCTCCTTTTTaGCGCAAGACAAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPFVAPF*RKTSSR
Trigger: CCTTGAACTTGTCTTGCGCAAAAAAGGAGCCACAAA...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp TCAAACTCTCTCTCTCGTCCGAGTCGCCCTGTGAGGGAGACGCCCTGGCACCCAAGAATCGTTTGCTTATaGGCAGCTAGCGCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: SNSLSRPSRPVRETPWHPRIVCL*AASALK
Trigger: CTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTCT...TGGGTGCCAGGGCGTCTCCCTCACAGGGCGACTCGGACGAGAGAGAGAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS GCA 90 bp AAGTTTAAGGTTGTCAACGTCTCTCCAAACTGGAAAAGGCGACTGTaGAACCACCACCACATGTTCAGGTCTCGATCCCTCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: KFKVVNVSPNWKRRL*NHHHMFRSRSLGLS
Trigger: AGACAGCCCGAGGGATCGAGACCTGAACATGTGGTGGTGGTTGCACAGTCGCCTTTTCCAGTTTGGAGAGACGTTGACAACCTTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561061.5
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACCTGAGGAGAACTGGTaGCCTGTAATGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTPEENW*PVMGHH
Trigger: GTGGTGGCCCATTACAGGCAACCAGTTCTCCTCAGG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAGAACAACAGCTaGCACCATGCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVWQNNS*HHALRR
Trigger: TCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCAAGGGTGGTTCTaGGACTGCAGGGCTGACCGT +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVFQGWF*DCRADR
Trigger: ACGGTCAGCCCTGCAGTCCAAGAACCACCCTTGAAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATGGCAGAACAACAGCTaGCACCATGCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTWQNNS*HHALRR
Trigger: TCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTTCAAGGGTGGTTCTaGGACTGCAGGGCTGACCGT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHFQGWF*DCRADR
Trigger: ACGGTCAGCCCTGCAGTCCAAGAACCACCCTTGAAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATTGTAGGCCACACATaGGATGAAGGCGGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVIVGHT*DEGGLE
Trigger: CTCTAACCCGCCTTCATCCAATGTGTGGCCTACAAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGATTGTAGGCCACACATaGGATGAAGGCGGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKIVGHT*DEGGLE
Trigger: CTCTAACCCGCCTTCATCCAATGTGTGGCCTACAAT...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS CCA 90 bp GCTGAGAGCCTATCCAACGCTTCCTTCTTCCTAATGATCCATGATTaGATTTCTATATCCACATCTCTCCCAGTGGTCAATGCGCCTCAG +
Preference number: 5 (lower is better)
Translates to: AESLSNASFFLMIHD*ISISTSLPVVNAPQ
Trigger: CTGAGGCGCATTGACCACTGGGAGAGATGTGGATATAGAAATCCAATCATGGATCATTAGGAAGAAGGAAGCGTTGGATAGGCTCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558832.5
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGGCCCCAGGATTTCTaGCCCTTCCTTTCTGTCATC +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGRPQDF*PFLSVI
Trigger: GATGACAGAAAGGAAGGGCAAGAAATCCTGGGGCCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320985.14
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGAACAACTTGAAGTaGGCTAGGCTGCTCAAGACT +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVRNNLK*ARLLKT
Trigger: AGTCTTGAGCAGCCTAGCCAACTTCAAGTTGTTCCT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTTGTCCTGGGGTTCATTaGCATTTGCAGATTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTCPGVH*HLQIEA
Trigger: AGCCTCAATCTGCAAATGCAAATGAACCCCAGGACA...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACTACTTCTGGAACCATaGGTGGTTGATCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLLLEP*VVDPTG
Trigger: ACCAGTGGGATCAACCACCAATGGTTCCAGAAGTAG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCTACTTCTGGAACCATaGGTGGTTGATCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLLLEP*VVDPTG
Trigger: ACCAGTGGGATCAACCACCAATGGTTCCAGAAGTAG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATCAAGAGGTTCTACTaGTGGCTCTTCTTGTGCACC +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVIKRFY*WLFLCT
Trigger: GGTGCACAAGAAGAGCCACAAGTAGAACCTCTTGAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTCATCCTCTTCCCTaGTCAAACTCTCTCTCTCGT +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLHPLP*SNSLSR
Trigger: ACGAGAGAGAGAGTTTGACAAGGGAAGAGGATGAAG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTTCTTCAGACACTaGCTCACTACTCTCGCCTAC +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLFFRH*LTTLAY
Trigger: GTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAGCACACAGGTCTaGCTTAAGGCCAAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVYSTQV*LKAKGD
Trigger: ATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATTGTAGGCCACACATaGGATGAAGGCGGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHIVGHT*DEGGLE
Trigger: CTCTAACCCGCCTTCATCCAATGTGTGGCCTACAAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCCTGAGGAGAACTGGTaGCCTGTAATGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYPEENW*PVMGHH
Trigger: GTGGTGGCCCATTACAGGCAACCAGTTCTCCTCAGG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTGGCAGAACAACAGCTaGCACCATGCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKWQNNS*HHALRR
Trigger: TCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTGTCCTGGGGTTCATTaGCATTTGCAGATTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHCPGVH*HLQIEA
Trigger: AGCCTCAATCTGCAAATGCAAATGAACCCCAGGACA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCTACTTCTGGAACCATaGGTGGTTGATCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLLLEP*VVDPTG
Trigger: ACCAGTGGGATCAACCACCAATGGTTCCAGAAGTAG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTACTTGTGGCTCTTCTaGTGCACCCTCAGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGYLWLF*CTLSCV
Trigger: TACACAGCTGAGGGTGCACAAGAAGAGCCACAAGTA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATCAAGAGGTTCTACTaGTGGCTCTTCTTGTGCACC +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHIKRFY*WLFLCT
Trigger: GGTGCACAAGAAGAGCCACAAGTAGAACCTCTTGAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCTTCATCCTCTTCCCTaGTCAAACTCTCTCTCTCGT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLHPLP*SNSLSR
Trigger: ACGAGAGAGAGAGTTTGACAAGGGAAGAGGATGAAG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTTGTCCTAAGCTGCTaGCTTGACTTTCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHFVLSC*LDFQPC
Trigger: ACAGGGCTGAAAGTCAAGCAAGCAGCTTAGGACAAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGATTGTAGGCCACACATaGGATGAAGGCGGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGIVGHT*DEGGLE
Trigger: CTCTAACCCGCCTTCATCCAATGTGTGGCCTACAAT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCATGTGACGTTCAAGTaGGGTTCTGTATGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHHVTFK*GSVCKG
Trigger: ACCTTTGCATACAGAACCCAACTTGAACGTCACATG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAAGGGGTTGAACAGTaGATTCCTGAAGCAACCACT +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTKGVEQ*IPEATT
Trigger: AGTGGTTGCTTCAGGAATCAACTGTTCAACCCCTTT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATAAAGGGGTTGAACAGTaGATTCCTGAAGCAACCACT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHKGVEQ*IPEATT
Trigger: AGTGGTTGCTTCAGGAATCAACTGTTCAACCCCTTT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCCTGAGGAGAACTGGTaGCCTGTAATGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSPEENW*PVMGHH
Trigger: GTGGTGGCCCATTACAGGCAACCAGTTCTCCTCAGG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTGGCAGAACAACAGCTaGCACCATGCCCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYWQNNS*HHALRR
Trigger: TCTCCTCAGGGCATGGTGCAAGCTGTTGTTCTGCCA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGGAACAACTTGAAGTaGGCTAGGCTGCTCAAGACT +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGRNNLK*ARLLKT
Trigger: AGTCTTGAGCAGCCTAGCCAACTTCAAGTTGTTCCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACCCCCTTCAAAGCTTTaGTCCTTCTCAGACTTAACA +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTPPSKL*SFSDLT
Trigger: TGTTAAGTCTGAGAAGGACAAAAGCTTTGAAGGGGG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATCCCCCTTCAAAGCTTTaGTCCTTCTCAGACTTAACA +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHPPSKL*SFSDLT
Trigger: TGTTAAGTCTGAGAAGGACAAAAGCTTTGAAGGGGG...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATAGAGCTCTTCTGCACTaGGTTGTGCATTCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHRALLH*VVHSKH
Trigger: ATGCTTTGAATGCACAACCAAGTGCAGAAGAGCTCT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGCAGGGATATTTACTTaGCCTGGTTCAGGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHAGIFT*PGSGED
Trigger: ATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGC...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGGGGTTCATTTGCATTaGCAGATTGAGGCTGATCAT +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTGVHLH*QIEADH
Trigger: ATGATCAGCCTCAATCTGCAAATGCAAATGAACCCC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTCTTAAGCATGGAACACTGTTCTGGTCAGCAATGGCCACGATTGTGGGTAACTATTCTCCCTGTTGCTTaGGTAGTGAAAGATCAAGAG +
Preference number: 5 (lower is better)
Translates to: LLSMEHCSGQQWPRLWVTILPVA*VVKDQE
Trigger: CTCTTGATCTTTCACTACCAAAGCAACAGGGAGAAT...AGTTACCCACAATCGTGGCCATTGCTGACCAGAACAGTGTTCCATGCTTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTATGGGGTTGGCACTaGGTGGGATTACATTTACAA +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLWGWH*VGLHLQ
Trigger: TTGTAAATGTAATCCCACCAAGTGCCAACCCCATAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATAGAATCGTTTGCTTATaGGCAGCTAGCGCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHRIVCL*AASALK
Trigger: CTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTCT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCTTTTCTTCAGACACTaGCTCACTACTCTCGCCTAC +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLFFRH*LTTLAY
Trigger: GTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGGACAGCAGTTCAGGCTaGTTGATGCATTTTATTGTG +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVDSSSG*LMHFIV
Trigger: CACAATAAAATGCATCAACAAGCCTGAACTGCTGTC...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAACAAATATCTGTaGTCCCAACTTATGCCAGGC +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVFNKYL*SQLMPG
Trigger: GCCTGGCATAAGTTGGGACAACAGATATTTGTTGAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS GCA 90 bp GATTTCTTGCCCTTCCTTTCCTTAATAAGAATATTATCCAATGCCTaGTCTGTCTTCCTTAAACAGCTGCTTTCCTGCCTTGTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: DFLPFLSLIRILSNA*SVFLKQLLSCLVPR
Trigger: GCGGGGAACAAGGCAGGAAAGCAGCTGTTTAAGGAAGACAGAGCAGGCATTGGATAATATTCTTATTAAGGAAAGGAAGGGCAAGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558863.5
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATACACTGTCTGGTCTGTaGGCAGGTCATCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYTLSGL*AGHPLV
Trigger: TACCAGAGGATGACCTGCCAACAGACCAGACAGTGT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCATGTGACGTTCAAGTaGGGTTCTGTATGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGHVTFK*GSVCKG
Trigger: ACCTTTGCATACAGAACCCAACTTGAACGTCACATG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATTCTCTATCTTTaGCCGTATCTGTGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVFILYL*PYLWSC
Trigger: ACACGACCACAGATACGGCAAAAGATAGAGAATAAA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAGGATGCAAGATTGGCTaGATTATTCTCCAACACTTG +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTGCKIG*IILQHL
Trigger: CAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCC...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTGGAAGTTTGGTTGTTCCATCTaGATCAACCAAAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: ADLSWCRRDLFIFLLWWKFGCSI*INQRKT
Trigger: AGTCTTCCTTTGGTTGATCAAGATGGAACAACCAAA...CTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCTTCTGCACTTGGTaGTGCATTCAAAGCATAATA +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLFCTW*CIQSII
Trigger: TATTATGCTTTGAATGCACAACCAAGTGCAGAAGAG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTACTTGTGGCTCTTCTaGTGCACCCTCAGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKYLWLF*CTLSCV
Trigger: TACACAGCTGAGGGTGCACAAGAAGAGCCACAAGTA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAATTCTCCCTGTTGCTTaGGTAGTGAAAGATCAAGAG +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTILPVA*VVKDQE
Trigger: CTCTTGATCTTTCACTACCAAAGCAACAGGGAGAAT...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTTATGGGGTTGGCACTaGGTGGGATTACATTTACAA +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHLWGWH*VGLHLQ
Trigger: TTGTAAATGTAATCCCACCAAGTGCCAACCCCATAA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGAATCGTTTGCTTATaGGCAGCTAGCGCTCTTAAG +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGRIVCL*AASALK
Trigger: CTTAAGAGCGCTAGCTGCCAATAAGCAAACGATTCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTTCAAGGGTGGTTCTaGGACTGCAGGGCTGACCGT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSFQGWF*DCRADR
Trigger: ACGGTCAGCCCTGCAGTCCAAGAACCACCCTTGAAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGGCGATGATTCATGTGTaGAGAATAAGACCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGAMIHV*RIRPRV
Trigger: CACTCTGGGTCTTATTCTCAACACATGAATCATCGC...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATCAATACCGAGGAATaGAAGGATGAAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHINTEE*KDEMSQ
Trigger: CTGGGACATTTCATCCTTCAATTCCTCGGTATTGAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGAAACTGAAAACGTTATaGCGCCGCGGGTTCGCCTGC +
Preference number: 5 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVKLKTL*RRGFAC
Trigger: GCAGGCGAACCCGCGGCGCAATAACGTTTTCAGTTT...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACAATATGCAGTTaGTCTTCATCATCTGAATCT +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVSTICS*SSSSES
Trigger: AGATTCAGATGATGAAGACAAACTGCATATTGTGGA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTACACTGTCTGGTCTGTaGGCAGGTCATCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSTLSGL*AGHPLV
Trigger: TACCAGAGGATGACCTGCCAACAGACCAGACAGTGT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCCACACTCAGTGCATTaGAATTTACGATTACACCCA +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGPHSVH*NLRLHP
Trigger: TGGGTGTAATCGTAAATTCAAATGCACTGAGTGTGG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATTTATTCTCTATCTTTaGCCGTATCTGTGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTFILYL*PYLWSC
Trigger: ACACGACCACAGATACGGCAAAAGATAGAGAATAAA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGGTGAAGCATaGATTGTTTCTTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVCMGEA*IVSCSL
Trigger: CAAAGAACAAGAAACAATCAATGCTTCACCCATACA...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGAGGAACAACTTGAAGTaGGCTAGGCTGCTCAAGACT +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKRNNLK*ARLLKT
Trigger: AGTCTTGAGCAGCCTAGCCAACTTCAAGTTGTTCCT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACTCTTCTGCACTTGGTaGTGCATTCAAAGCATAATA +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLFCTW*CIQSII
Trigger: TATTATGCTTTGAATGCACAACCAAGTGCAGAAGAG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGCTGAATCAGCAATTTTaGAGAGCTCTTCTGCACTTG +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGLNQQF*RALLHL
Trigger: CAAGTGCAGAAGAGCTCTCAAAAATTGCTGATTCAG...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTCAGACCTTCAGTTTTaGCTTCTTCTCCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGSDLQF*LLLPHS
Trigger: AGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTGA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCTTTTCTTCAGACACTaGCTCACTACTCTCGCCTAC +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLFFRH*LTTLAY
Trigger: GTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTATCAGATTAACATaGTTAGTCCCTGCAATCAGA +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVLIRLT*LVPAIR
Trigger: TCTGATTGCAGGGACTAACAATGTTAATCTGATAAG...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGAGGCGGGTTAGAGCCTaGAAAATACTGAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKRRVRA*KILRNG
Trigger: GCCATTTCTCAGTATTTTCAAGGCTCTAACCCGCCT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGATCAATACCGAGGAATaGAAGGATGAAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGINTEE*KDEMSQ
Trigger: CTGGGACATTTCATCCTTCAATTCCTCGGTATTGAT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTTCAGGCACACCCGGATTTATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGCAGGAGAACCAATaGCATCTCTACTTTAAATCT +
Preference number: 5 (lower is better)
Translates to: RFRHTRIYFVCVCVCVCVMQENQ*HLYFKS
Trigger: AGATTTAAAGTAGAGATGCAATTGGTTCTCCTGCAT...CACACACACACACACACACACACACACAAAATAAATCCGGGTGTGCCTGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATATCTGCAGATCTTTCTaGGTGCAGGAGGGACCTCTT +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYICRSF*VQEGPL
Trigger: AAGAGGTCCCTCCTGCACCAAGAAAGATCTGCAGAT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACATCCACAATATGCAGTTaGTCTTCATCATCTGAATCT +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTSTICS*SSSSES
Trigger: AGATTCAGATGATGAAGACAAACTGCATATTGTGGA...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTCCACAATATGCAGTTaGTCTTCATCATCTGAATCT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHSTICS*SSSSES
Trigger: AGATTCAGATGATGAAGACAAACTGCATATTGTGGA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGAAAGGGGTTGAACAGTaGATTCCTGAAGCAACCACT +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKKGVEQ*IPEATT
Trigger: AGTGGTTGCTTCAGGAATCAACTGTTCAACCCCTTT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATTGTATGGGTGAAGCATaGATTGTTTCTTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHCMGEA*IVSCSL
Trigger: CAAAGAACAAGAAACAATCAATGCTTCACCCATACA...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGTTTGGTTGTTCCATCTaGATCAACCAAAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGFGCSI*INQRKT
Trigger: AGTCTTCCTTTGGTTGATCAAGATGGAACAACCAAA...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATTTGCATTTGCAGATaGAGGCTGATCATTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHICICR*RLIIVL
Trigger: AAGAACAATGATCAGCCTCAATCTGCAAATGCAAAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGGGGGTTCATTTGCATTaGCAGATTGAGGCTGATCAT +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKGVHLH*QIEADH
Trigger: ATGATCAGCCTCAATCTGCAAATGCAAATGAACCCC...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTACTTGTGGCTCTTCTaGTGCACCCTCAGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSYLWLF*CTLSCV
Trigger: TACACAGCTGAGGGTGCACAAGAAGAGCCACAAGTA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATATCAAGAGGTTCTACTaGTGGCTCTTCTTGTGCACC +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYIKRFY*WLFLCT
Trigger: GGTGCACAAGAAGAGCCACAAGTAGAACCTCTTGAT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTTTGTGGCTCCTTTTTaGCGCAAGACAAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKFVAPF*RKTSSR
Trigger: CCTTGAACTTGTCTTGCGCAAAAAAGGAGCCACAAA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCTTCATCCTCTTCCCTaGTCAAACTCTCTCTCTCGT +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLHPLP*SNSLSR
Trigger: ACGAGAGAGAGAGTTTGACAAGGGAAGAGGATGAAG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAACTCTTCCTCATCCCCTaGTGGTTTTTCACATTCTTT +
Preference number: 5 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSELFLIP*WFFTFF
Trigger: AAAGAATGTGAAAAACCACAAGGGGATGAGGAAGAG...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAATTTGTCCTAAGCTGCTaGCTTGACTTTCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKFVLSC*LDFQPC
Trigger: ACAGGGCTGAAAGTCAAGCAAGCAGCTTAGGACAAA...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACTCAATGGCAATCTTTaGAACTCCATTTTAAACCAC +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLNGNL*NSILNH
Trigger: GTGGTTTAAAATGGAGTTCAAAAGATTGCCATTGAG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CTGAGAAATGGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACACTTATCAGATTAACATaGTTAGTCCCTGCAATCAGA +
Preference number: 5 (lower is better)
Translates to: LRNGTYSTQVLLKAKGDTLIRLT*LVPAIR
Trigger: TCTGATTGCAGGGACTAACAATGTTAATCTGATAAG...TGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCCATTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTACAGCACACAGGTCTaGCTTAAGGCCAAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYYSTQV*LKAKGD
Trigger: ATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAGGCGGGTTAGAGCCTaGAAAATACTGAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKRRVRA*KILRNG
Trigger: GCCATTTCTCAGTATTTTCAAGGCTCTAACCCGCCT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GGCACTTACAGCACACAGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATATGCAGGAGAACCAATaGCATCTCTACTTTAAATCT +
Preference number: 5 (lower is better)
Translates to: GTYSTQVLLKAKGDTKLHMQENQ*HLYFKS
Trigger: AGATTTAAAGTAGAGATGCAATTGGTTCTCCTGCAT...ATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTAAGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GAGACAAATCAACAAATGCTAGTTATTGTAGGCCACACATTGGATGAAGGCGGGAGCAGTTCAGGCTTGTaGATGCATTTTATTGTGAGA +
Preference number: 5 (lower is better)
Translates to: ETNQQMLVIVGHTLDEGGSSSGL*MHFIVR
Trigger: TCTCACAATAAAATGCATCAACAAGCCTGAACTGCT...CCCGCCTTCATCCAATGTGTGGCCTACAATAACTAGCATTTGTTGATTTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACATGTGACGTTCAAGTaGGGTTCTGTATGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKHVTFK*GSVCKG
Trigger: ACCTTTGCATACAGAACCCAACTTGAACGTCACATG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCCACACTCAGTGCATTaGAATTTACGATTACACCCA +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKPHSVH*NLRLHP
Trigger: TGGGTGTAATCGTAAATTCAAATGCACTGAGTGTGG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATAAAGGGGTTGAACAGTaGATTCCTGAAGCAACCACT +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYKGVEQ*IPEATT
Trigger: AGTGGTTGCTTCAGGAATCAACTGTTCAACCCCTTT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAAGTGTATGGGTGAAGCATaGATTGTTTCTTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: CSWQGYLLCLVQEKMVQKCMGEA*IVSCSL
Trigger: CAAAGAACAAGAAACAATCAATGCTTCACCCATACA...CTTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCCCCCTTCAAAGCTTTaGTCCTTCTCAGACTTAACA +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYPPSKL*SFSDLT
Trigger: TGTTAAGTCTGAGAAGGACAAAAGCTTTGAAGGGGG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATAGAGCTCTTCTGCACTaGGTTGTGCATTCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYRALLH*VVHSKH
Trigger: ATGCTTTGAATGCACAACCAAGTGCAGAAGAGCTCT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAAGAGCTCTTCTGCACTaGGTTGTGCATTCAAAGCAT +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKRALLH*VVHSKH
Trigger: ATGCTTTGAATGCACAACCAAGTGCAGAAGAGCTCT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGCAGGGATATTTACTTaGCCTGGTTCAGGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKAGIFT*PGSGED
Trigger: ATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGGGGTTCATTTGCATTaGCAGATTGAGGCTGATCAT +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYGVHLH*QIEADH
Trigger: ATGATCAGCCTCAATCTGCAAATGCAAATGAACCCC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTGTCCTGGGGTTCATTaGCATTTGCAGATTGAGGCT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSCPGVH*HLQIEA
Trigger: AGCCTCAATCTGCAAATGCAAATGAACCCCAGGACA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTATCAAGAGGTTCTACTaGTGGCTCTTCTTGTGCACC +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSIKRFY*WLFLCT
Trigger: GGTGCACAAGAAGAGCCACAAGTAGAACCTCTTGAT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTTGTGGCTCCTTTTTaGCGCAAGACAAGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYFVAPF*RKTSSR
Trigger: CCTTGAACTTGTCTTGCGCAAAAAAGGAGCCACAAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGCGATGATTCATGTGTaGAGAATAAGACCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKAMIHV*RIRPRV
Trigger: CACTCTGGGTCTTATTCTCAACACATGAATCATCGC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCTCTTCCTCATCCCCTaGTGGTTTTTCACATTCTTT +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLFLIP*WFFTFF
Trigger: AAAGAATGTGAAAAACCACAAGGGGATGAGGAAGAG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTTCAGACCTTCAGTTTTaGCTTCTTCTCCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFSDLQF*LLLPHS
Trigger: AGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTGA...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTCAGACCTTCAGTTTTaGCTTCTTCTCCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKSDLQF*LLLPHS
Trigger: AGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTGA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTTGTCCTAAGCTGCTaGCTTGACTTTCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSFVLSC*LDFQPC
Trigger: ACAGGGCTGAAAGTCAAGCAAGCAGCTTAGGACAAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGTTTGTCCTAAGCTGCTaGCTTGACTTTCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVFVLSC*LDFQPC
Trigger: ACAGGGCTGAAAGTCAAGCAAGCAGCTTAGGACAAA...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCTTTTCTTCAGACACTaGCTCACTACTCTCGCCTAC +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSLFFRH*LTTLAY
Trigger: GTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTACAGCACACAGGTCTaGCTTAAGGCCAAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSYSTQV*LKAKGD
Trigger: ATCTCCTTTGGCCTTAAGCAAGACCTGTGTGCTGTA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGATCAATACCGAGGAATaGAAGGATGAAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKINTEE*KDEMSQ
Trigger: CTGGGACATTTCATCCTTCAATTCCTCGGTATTGAT...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTAGGCTTCATTTGTCTTTTCTTCAGACACTTGCTCACTACTCTCGCCTACTTTTTCAACAAATATCTGTaGTCCCAACTTATGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGFICLFFRHLLTTLAYFFNKYL*SQLMPG
Trigger: GCCTGGCATAAGTTGGGACAACAGATATTTGTTGAA...AAAGTAGGCGAGAGTAGTGAGCAAGTGTCTGAAGAAAAGACAAATGAAGCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCCACACTCAGTGCATTaGAATTTACGATTACACCCA +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYPHSVH*NLRLHP
Trigger: TGGGTGTAATCGTAAATTCAAATGCACTGAGTGTGG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGTTTATTCTCTATCTTTaGCCGTATCTGTGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKFILYL*PYLWSC
Trigger: ACACGACCACAGATACGGCAAAAGATAGAGAATAAA...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGGATGCAAGATTGGCTaGATTATTCTCCAACACTTG +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKGCKIG*IILQHL
Trigger: CAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATGGATGCAAGATTGGCTaGATTATTCTCCAACACTTG +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYGCKIG*IILQHL
Trigger: CAAGTGTTGGAGAATAATCAAGCCAATCTTGCATCC...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AATAATAGTATCAGAGGTATGATGACAGAAGTGCAGGAGCTGAGAGTCAGAAAGCTCTTCTGCACTTGGTaGTGCATTCAAAGCATAATA +
Preference number: 5 (lower is better)
Translates to: NNSIRGMMTEVQELRVRKLFCTW*CIQSII
Trigger: TATTATGCTTTGAATGCACAACCAAGTGCAGAAGAG...CTTTCTGACTCTCAGCTCCTGCACTTCTGTCATCATACCTCTGATACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATCTGAATCAGCAATTTTaGAGAGCTCTTCTGCACTTG +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLNQQF*RALLHL
Trigger: CAAGTGCAGAAGAGCTCTCAAAAATTGCTGATTCAG...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGGCAGGGATATTTACTTaGCCTGGTTCAGGAGAAGAT +
Preference number: 5 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVAGIFT*PGSGED
Trigger: ATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGC...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGGGGTTCATTTGCATTaGCAGATTGAGGCTGATCAT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSGVHLH*QIEADH
Trigger: ATGATCAGCCTCAATCTGCAAATGCAAATGAACCCC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATTTATGGGGTTGGCACTaGGTGGGATTACATTTACAA +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYLWGWH*VGLHLQ
Trigger: TTGTAAATGTAATCCCACCAAGTGCCAACCCCATAA...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTGCGATGATTCATGTGTaGAGAATAAGACCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSAMIHV*RIRPRV
Trigger: CACTCTGGGTCTTATTCTCAACACATGAATCATCGC...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAACTCTTCCTCATCCCCTaGTGGTTTTTCACATTCTTT +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKLFLIP*WFFTFF
Trigger: AAAGAATGTGAAAAACCACAAGGGGATGAGGAAGAG...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAATTCAACAAATATCTGTaGTCCCAACTTATGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKFNKYL*SQLMPG
Trigger: GCCTGGCATAAGTTGGGACAACAGATATTTGTTGAA...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAGGTGGAAGTTTAAGGTaGTCCATTGACTTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKGGSLR*SIDFLL
Trigger: CAAAAGGAAGTCAATGGACAACCTTAAACTTCCACC...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp TTGTTCTTGGCAGGGATATTTACTTTGCCTGGTTCAGGAGAAGATGGTTCAGAACTCTTTATATTCCTCTaGTGGTGGAAGTTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: LFLAGIFTLPGSGEDGSELFIFL*WWKFKV
Trigger: AACCTTAAACTTCCACCACAAGAGGAATATAAAGAG...TTCTGAACCATCTTCTCCTGAACCAGGCAAAGTAAATATCCCTGCCAAGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS GCA 90 bp GTGTCTTGTTGTTGTAGAAACTCTTCAACATTAGGATCATGGTTTTaGTCATTTTCTGCATCTGACTCGCATTCATCATCTGTACATCCT +
Preference number: 5 (lower is better)
Translates to: VSCCCRNSSTLGSWF*SFSASDSHSSSVHP
Trigger: AGGATGTACAGATGATGAATGCGAGTCAGATGCAGAAAATGAGCAAAACCATGATCCTAATGTTGAAGAGTTTCTACAACAACAAGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558863.5
CDS CCA 90 bp ACAGCAGTGTCTTGTTGTTGTAGAAACTCTTCAACATTAGGATCATaGTTTTGCTCATTTTCTGCATCTGACTCGCATTCATCATCTGTA +
Preference number: 5 (lower is better)
Translates to: TAVSCCCRNSSTLGS*FCSFSASDSHSSSV
Trigger: TACAGATGATGAATGCGAGTCAGATGCAGAAAATGAGCAAAACCATGATCCTAATGTTGAAGAGTTTCTACAACAACAAGACACTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558863.5
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCTGAATCAGCAATTTTaGAGAGCTCTTCTGCACTTG +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSLNQQF*RALLHL
Trigger: CAAGTGCAGAAGAGCTCTCAAAAATTGCTGATTCAG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTATTCTCCCTGTTGCTTaGGTAGTGAAAGATCAAGAG +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSILPVA*VVKDQE
Trigger: CTCTTGATCTTTCACTACCAAAGCAACAGGGAGAAT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCTCTTCCTCATCCCCTaGTGGTTTTTCACATTCTTT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSLFLIP*WFFTFF
Trigger: AAAGAATGTGAAAAACCACAAGGGGATGAGGAAGAG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTCAGACCTTCAGTTTTaGCTTCTTCTCCCTCATTCT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSSDLQF*LLLPHS
Trigger: AGAATGAGGGAGAAGAAGCAAAAACTGAAGGTCTGA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTATCAATACCGAGGAATaGAAGGATGAAATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSINTEE*KDEMSQ
Trigger: CTGGGACATTTCATCCTTCAATTCCTCGGTATTGAT...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATAGCAGTTCAGGCTTGTaGATGCATTTTATTGTGAGA +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYSSSGL*MHFIVR
Trigger: TCTCACAATAAAATGCATCAACAAGCCTGAACTGCT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTTATTCTCTATCTTTaGCCGTATCTGTGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSFILYL*PYLWSC
Trigger: ACACGACCACAGATACGGCAAAAGATAGAGAATAAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAATGTATGGGTGAAGCATaGATTGTTTCTTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKCMGEA*IVSCSL
Trigger: CAAAGAACAAGAAACAATCAATGCTTCACCCATACA...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTTTGGTTGTTCCATCTaGATCAACCAAAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSFGCSI*INQRKT
Trigger: AGTCTTCCTTTGGTTGATCAAGATGGAACAACCAAA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTCTCTTCTGCACTTGGTaGTGCATTCAAAGCATAATA +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSLFCTW*CIQSII
Trigger: TATTATGCTTTGAATGCACAACCAAGTGCAGAAGAG...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp TTACACAGTAGTGAACAGGAATCACAGCATACAGGTTACTGTGTTTCCATGAAAATTTGCATTTGCAGATaGAGGCTGATCATTGTTCTT +
Preference number: 5 (lower is better)
Translates to: LHSSEQESQHTGYCVSMKICICR*RLIIVL
Trigger: AAGAACAATGATCAGCCTCAATCTGCAAATGCAAAT...TTTCATGGAAACACAGTAACCTGTATGCTGTGATTCCTGTTCACTACTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp AGGTCTTGCTTAAGGCCAAAGGAGATACAAAGCTTCATGTCATATCCTTCATATATGCAGGAGAACCAATaGCATCTCTACTTTAAATCT +
Preference number: 5 (lower is better)
Translates to: RSCLRPKEIQSFMSYPSYMQENQ*HLYFKS
Trigger: AGATTTAAAGTAGAGATGCAATTGGTTCTCCTGCAT...ATATGAAGGATATGACATGAAGCTTTGTATCTCCTTTGGCCTTAAGCAAGACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320985.14
ENST00000424869.6
ENST00000437844.6
ENST00000446923.7
CDS-3UTR CAA 90 bp GTGCATTCAAAGCATAATATGCTTTTAGGAGAGACAAGAGGTTCTTTAAAGGTGAGCAGTTCAGGCTTGTaGATGCATTTTATTGTGAGA +
Preference number: 5 (lower is better)
Translates to: VHSKHNMLLGETRGSLKVSSSGL*MHFIVR
Trigger: TCTCACAATAAAATGCATCAACAAGCCTGAACTGCT...CACCTTTAAAGAACCTCTTGTCTCTCCTAAAAGCATATTATGCTTTGAATGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS-3UTR CAA 90 bp CAACATAAAATCAATACCGAGGAATTGAAGGATGAAATGTCCCAGTGTTTCAGTTGGAACACACACTATTaGACGCTAAAACAGGAAATT +
Preference number: 5 (lower is better)
Translates to: QHKINTEELKDEMSQCFSWNTHY*TLKQEI
Trigger: AATTTCCTGTTTTAGCGTCAAATAGTGTGTGTTCCA...ACTGAAACACTGGGACATTTCATCCTTCAATTCCTCGGTATTGATTTTATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446923.7
CDS GCA 72 bp AGTTGGAAAGGTAAAGTTGGAGGCTCGGCGGCGTCCTaGCTCCGCGCTGGCCACACCCGCCGCGGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: SWKGKVGGSAAS*LRAGHTRRGCP
Trigger: CGGGCAGCCGCGGCGGGTGTGGCCAGCGCGGAGGCAGGACGCCGCCGAGCCTCCAACTTTACCTTTCCAACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542879.5
ENST00000560196.5
CDS CAA 72 bp ACACCTAGAGGCTCTCGCTCTACGGCCGGAACCTTGTaGCTAGGGACCGGGCGGTTTGCGGCAACCGTGGGC +
Preference number: 6 (lower is better)
Translates to: TPRGSRSTAGTL*LGTGRFAATVG
Trigger: GCCCACGGTTGCCGCAAACCGCCCGGTCCCTAGCAACAAGGTTCCGGCCGTAGAGCGAGAGCCTCTAGGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000488625.6
ENST00000542879.5
ENST00000560196.5
ENST00000561304.5
CDS CCA 72 bp AGGGACGCGGTCAGAAAGGCGACGGGCTGTCGGAGTTaGAAAGGTAAAGTTGGAGGCTCGGCGGCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RDAVRKATGCRS*KGKVGGSAASC
Trigger: GCAGGACGCCGCCGAGCCTCCAACTTTACCTTTCCAACTCCGACAGCCCGTCGCCTTTCTGACCGCGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542879.5
ENST00000560196.5
ENST00000561304.5
CDS GCA 72 bp GGGCCATCCGCCATGATCCTCTCGCTTGTGTCTAAATaGTCGAGTCACCTCCTCCCCCTCCCTCCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GPSAMILSLVSK*SSHLLPLPPPS
Trigger: GGAAGGGGGAGGGAGGGGGAGGAGGTGACTCGAGCATTTAGACACAAGCGAGAGGATCATGGCGGATGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000320985.14
CDS CAA 72 bp CTTACACCTAGAGGCTCTCGCTCTACGGCCGGAACCTaGTTGCTAGGGACCGGGCGGTTTGCGGCAACCGTG +
Preference number: 6 (lower is better)
Translates to: LTPRGSRSTAGT*LLGTGRFAATV
Trigger: CACGGTTGCCGCAAACCGCCCGGTCCCTAGCAACAAGGTTCCGGCCGTAGAGCGAGAGCCTCTAGGTGTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000488625.6
ENST00000542879.5
ENST00000560196.5
ENST00000561304.5
CDS CAA 90 bp ACCTTCCTTACACCTAGAGGCTCTCGCTCTACGGCCGGAACCTTGTaGCTAGGGACCGGGCGGTTTGCGGCAACCGTGGGCACTGCTGAA +
Preference number: 6 (lower is better)
Translates to: TFLTPRGSRSTAGTL*LGTGRFAATVGTAE
Trigger: TTCAGCAGTGCCCACGGTTGCCGCAAACCGCCCGGTCCCTAGCAACAAGGTTCCGGCCGTAGAGCGAGAGCCTCTAGGTGTAAGGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000488625.6
ENST00000542879.5
ENST00000560196.5
ENST00000561304.5
CDS CAA 90 bp ATCACCTTCCTTACACCTAGAGGCTCTCGCTCTACGGCCGGAACCTaGTTGCTAGGGACCGGGCGGTTTGCGGCAACCGTGGGCACTGCT +
Preference number: 6 (lower is better)
Translates to: ITFLTPRGSRSTAGT*LLGTGRFAATVGTA
Trigger: AGCAGTGCCCACGGTTGCCGCAAACCGCCCGGTCCCTAGCAACAAGGTTCCGGCCGTAGAGCGAGAGCCTCTAGGTGTAAGGAAGGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000488625.6
ENST00000542879.5
ENST00000560196.5
ENST00000561304.5
CDS TCA 72 bp CCTGCTTTCTGCGCTTACACCTGGGGCCATCCGCCATaGTCCTCTCGCTTGTGTCTAAATGCTCGAGTCACC +
Preference number: 6 (lower is better)
Translates to: PAFCAYTWGHPP*SSRLCLNARVT
Trigger: GGTGACTCGAGCATTTAGACACAAGCGAGAGGATCATGGCGGATGGCCCCAGGTGTAAGCGCAGAAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320985.14
CDS GCA 72 bp TTTAAACTGAAAACGTTATTGCGCCGCGGGTTCGCCTaGTTTCTGCGCTTACACCTGGGGCCATCCGCCATG +
Preference number: 6 (lower is better)
Translates to: FKLKTLLRRGFA*FLRLHLGPSAM
Trigger: CATGGCGGATGGCCCCAGGTGTAAGCGCAGAAAGCAGGCGAACCCGCGGCGCAATAACGTTTTCAGTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS GCA 72 bp TCCAATGCCTGCTCTGTCTTCCTTAAACAGCGTTATTaGGCCGCGGGTTCGCCTGCTTTCTGCGCTTACACC +
Preference number: 6 (lower is better)
Translates to: SNACSVFLKQRY*AAGSPAFCAYT
Trigger: GGTGTAAGCGCAGAAAGCAGGCGAACCCGCGGCGCAATAACGCTGTTTAAGGAAGACAGAGCAGGCATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559858.5
CDS GCA 72 bp GTTGTCAACGTCTCTCCAAACTGGAAAAGGCGACTGTaGAACCACCACCACATGTTCAGGTCTCGATCCCTC +
Preference number: 6 (lower is better)
Translates to: VVNVSPNWKRRL*NHHHMFRSRSL
Trigger: GAGGGATCGAGACCTGAACATGTGGTGGTGGTTGCACAGTCGCCTTTTCCAGTTTGGAGAGACGTTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561061.5
CDS TCA 72 bp GGTTTGAGGGGCTTTCCCTTTAGAGAACAAGGTGGCTaGCACAAACTGATCAAGTTCTCACACCCCACACCT +
Preference number: 6 (lower is better)
Translates to: GLRGFPFREQGG*HKLIKFSHPTP
Trigger: AGGTGTGGGGTGTGAGAACTTGATCAGTTTGTGTCAGCCACCTTGTTCTCTAAAGGGAAAGCCCCTCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000493835.5
ENST00000560909.2
ENST00000561304.5
CDS CCA 72 bp TGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTaGAAGTTTAAGGTTGTCCATGTTGGCCAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: WCRRDLFIFLLW*KFKVVHVGQAG
Trigger: ACCAGCCTGGCCAACATGGACAACCTTAAACTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560909.2
CDS CCA 72 bp TGGTGGAAGTTTAAGGTTGTCAACGTCTCTCCAAACTaGAAAAGGCGACTGTGCAACCACCACCACATGTTC +
Preference number: 6 (lower is better)
Translates to: WWKFKVVNVSPN*KRRLCNHHHMF
Trigger: GAACATGTGGTGGTGGTTGCACAGTCGCCTTTTCCAGTTTGGAGAGACGTTGACAACCTTAAACTTCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561061.5
CDS GCA 72 bp ATTCTTTCCTGTTCAGGTAAACATGTTTACAGCAGCTaGACAGACGCTGGGTGGTTCAGACTCACATGTCAC +
Preference number: 6 (lower is better)
Translates to: ILSCSGKHVYSS*TDAGWFRLTCH
Trigger: GTGACATGTGAGTCTGAACCACCCAGCGTCTGTGCAGCTGCTGTAAACATGTTTACCTGAACAGGAAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606671.5
CDS CCA 72 bp TGGTGCAGGAGGGACCTCTTTATATTCCTCTTGTGGTaGAAGTTTAAGGTTGTCAACGTCTCTCCAAACTGG +
Preference number: 6 (lower is better)
Translates to: WCRRDLFIFLLW*KFKVVNVSPNW
Trigger: CCAGTTTGGAGAGACGTTGACAACCTTAAACTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561061.5
CDS CAA 72 bp CTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTaGTGGTGGAAGTTTAAGGTTGTCCATGTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LSWCRRDLFIFL*WWKFKVVHVGQ
Trigger: CTGGCCAACATGGACAACCTTAAACTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560909.2
CDS TCA 72 bp ATGTCTTCAGATGGGAGTTTTCGGCCAATTGCCAGTTaGGAATTTAAACTGAAAACGTTATTGCGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: MSSDGSFRPIAS*EFKLKTLLRRG
Trigger: CCCGCGGCGCAATAACGTTTTCAGTTTAAATTCTCAACTGGCAATTGGCCGAAAACTCCCATCTGAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437844.6
CDS CAA 72 bp CTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTaGTGGTGGAAGTTTAAGGTTGTCAACGTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSWCRRDLFIFL*WWKFKVVNVSP
Trigger: TGGAGAGACGTTGACAACCTTAAACTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561061.5
CDS CAA 90 bp TCTGCAGATCTTTCTTGGTGCAGGAGGGACCTCTTTATATTCCTCTaGTGGTGGAAGTTTAAGGTTGTCAACGTCTCTCCAAACTGGAAA +
Preference number: 6 (lower is better)
Translates to: SADLSWCRRDLFIFL*WWKFKVVNVSPNWK
Trigger: TTTCCAGTTTGGAGAGACGTTGACAACCTTAAACTTCCACCACAAGAGGAATATAAAGAGGTCCCTCCTGCACCAAGAAAGATCTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561061.5
CDS TCA 72 bp ATGTCTTCAGATGGGAGTTTTCGGCCAATTGCCAGTTaGGAATTTAAACTGAAAACTGGTTTACGACACTCC +
Preference number: 6 (lower is better)
Translates to: MSSDGSFRPIAS*EFKLKTGLRHS
Trigger: GGAGTGTCGTAAACCAGTTTTCAGTTTAAATTCTCAACTGGCAATTGGCCGAAAACTCCCATCTGAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000488625.6
ENST00000560196.5
ENST00000561304.5
CDS GCA 72 bp CCCTTCCTTTCCTTAATAAGAATATTATCCAATGCCTaGTCTGTCTTCCTTAAACAGCTGCTTTCCTGCCTT +
Preference number: 6 (lower is better)
Translates to: PFLSLIRILSNA*SVFLKQLLSCL
Trigger: AAGGCAGGAAAGCAGCTGTTTAAGGAAGACAGAGCAGGCATTGGATAATATTCTTATTAAGGAAAGGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558863.5
CDS CCA 72 bp CTATCCAACGCTTCCTTCTTCCTAATGATCCATGATTaGATTTCTATATCCACATCTCTCCCAGTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: LSNASFFLMIHD*ISISTSLPVVN
Trigger: ATTGACCACTGGGAGAGATGTGGATATAGAAATCCAATCATGGATCATTAGGAAGAAGGAAGCGTTGGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558832.5
CDS CAA 90 bp CACATCAGCAACAGCGGCAACAGCTCAATATGGAACACACACTATTaGACGCTAAAACAGGAAATTAAAATTGCAATAGCCTATGCTCCA +
Preference number: 6 (lower is better)
Translates to: HISNSGNSSIWNTHY*TLKQEIKIAIAYAP
Trigger: TGGAGCATAGGCTATTGCAATTTTAATTTCCTGTTTTAGCGTCAAATAGTGTGTGTTCCATATTGAGCTGTTGCCGCTGTTGCTGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446923.7
ENST00000559496.5