RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC9 (Homo sapiens)

Ensembl gene IDs: ENSG00000188706

Ensembl transcript IDs: ENST00000357166.11, ENST00000371064.7, ENST00000406492.2, ENST00000433917.5, ENST00000491039.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCAGTGTGGTTACCATAGCCAGAGGTGGGCCGAGGCCTTAGGGTaGGTTACCCGAGAGGGCAGCAGTGCTGGGCTTTCCCTCACTCAG +
Preference number: 1 (lower is better)
Translates to: PQCGYHSQRWAEALG*VTREGSSAGLSLTQ
Trigger: CTGAGTGAGGGAAAGCCCAGCACTGCTGCCCTCTCGGGTAACTCACCCTAAGGCCTCGGCCCACCTCTGGCTATGGTAACCACACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR GCA 90 bp GAGGAGAGGAGAGGAGAGCCTCTCTGTGCCTTGGTTTCCCATTTGTaGATTCAGGGCCTCTGCAGGCCTCACACAGGGAGTCTGAGGGGA +
Preference number: 1 (lower is better)
Translates to: EERRGEPLCALVSHL*IQGLCRPHTGSLRG
Trigger: TCCCCTCAGACTCCCTGTGTGAGGCCTGCAGAGGCCCTGAATGCACAAATGGGAAACCAAGGCACAGAGAGGCTCTCCTCTCCTCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR GCA 90 bp CTCACCACAGCCAATTTCCACCTGCCCCCAGAGGTTTGGGATCAGTaGCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTG +
Preference number: 1 (lower is better)
Translates to: LTTANFHLPPEVWDQ*QPSWPGKVGCIGSL
Trigger: CAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCACTGATCCCAAACCTCTGGGGGCAGGTGGAAATTGGCTGTGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR TCA 90 bp AGGATTTGTGGGCAATGCTGGCACTTGGTGGCCAGGAGAATCTTCTaGCCCCACTCTCCCTCCTCTTCAGTCCTGAAGACCCCAAGAACC +
Preference number: 1 (lower is better)
Translates to: RICGQCWHLVARRIF*PHSPSSSVLKTPRT
Trigger: GGTTCTTGGGGTCTTCAGGACTGAAGAGGAGGGAGAGTGGGGTCAGAAGATTCTCCTGGCCACCAAGTGCCAGCATTGCCCACAAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR CCA 90 bp AATTTCCACCTGCCCCCAGAGGTTTGGGATCAGTGCCAACCATCCTaGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAG +
Preference number: 1 (lower is better)
Translates to: NFHLPPEVWDQCQPS*PGKVGCIGSLRKKE
Trigger: CTCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCACTGATCCCAAACCTCTGGGGGCAGGTGGAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp GATCAATGGAGAGTTTGGAACTACCTCTCCAACCCAAGGGTGCCCTaGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAACCC +
Preference number: 1 (lower is better)
Translates to: DQWRVWNYLSNPRVP*LMEVWGVTSNPFQP
Trigger: GGGTTGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTCCAAACTCTCCATTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp ACGGGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATaGAATTTAGCTGCTACGGAATCAGAATCCACCTCTAACCCAACC +
Preference number: 1 (lower is better)
Translates to: TGALWVKAGWSGQGE*NLAATESESTSNPT
Trigger: GGTTGGGTTAGAGGTGGATTCTGATTCCGTAGCAGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp GAGATTTGGTCAGTAGGAACGGGTGCTTTATGGGTAAAGGCAGGATaGTCAGGACAGGGAGAATGGAATTTAGCTGCTACGGAATCAGAA +
Preference number: 1 (lower is better)
Translates to: EIWSVGTGALWVKAG*SGQGEWNLAATESE
Trigger: TTCTGATTCCGTAGCAGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACCCGTTCCTACTGACCAAATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp TTTAATCTCCCCTCTGATCAGATAGGGACAGTCCCAGCTGGTGCATaGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAACATGGA +
Preference number: 1 (lower is better)
Translates to: FNLPSDQIGTVPAGA*YEWDRSSGQHLKHG
Trigger: TCCATGTTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGACTGTCCCTATCTGATCAGAGGGGAGATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp GTCCAGAATAAGAAAACCTTCAGCCCAGAATGTAGTATAGATCAATaGAGAGTTTGGAACTACCTCTCCAACCCAAGGGTGCCCTGGTTA +
Preference number: 1 (lower is better)
Translates to: VQNKKTFSPECSIDQ*RVWNYLSNPRVPWL
Trigger: TAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTCCAAACTCTCCATTGATCTATACTACATTCTGGGCTGAAGGTTTTCTTATTCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp CCCTCTGATCAGATAGGGACAGTCCCAGCTGGTGCATGGTATGAATaGGACAGATCTTCAGGCCAACATCTTAAACATGGAAGATTTATT +
Preference number: 1 (lower is better)
Translates to: PSDQIGTVPAGAWYE*DRSSGQHLKHGRFI
Trigger: AATAAATCTTCCATGTTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGACTGTCCCTATCTGATCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp CTCCAACAAAGTAAAGAGATTTGGTCAGTAGGAACGGGTGCTTTATaGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCT +
Preference number: 1 (lower is better)
Translates to: LQQSKEIWSVGTGAL*VKAGWSGQGEWNLA
Trigger: AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACCCGTTCCTACTGACCAAATCTCTTTACTTTGTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 90 bp GCTGAGTACTTATTAAAATGGGGTTCATATGAGTGCCAAGTTACCTaGGGAAACCTAACAACTTACAAATTCTCCAGGTTTGGCTTTATA +
Preference number: 1 (lower is better)
Translates to: AEYLLKWGSYECQVT*GNLTTYKFSRFGFI
Trigger: TATAAAGCCAAACCTGGAGAATTTGTAAGTTGTTAGGTTTCCCCAGGTAACTTGGCACTCATATGAACCCCATTTTAATAAGTACTCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CAA 90 bp AGTGGCTCTGGGACTCTGCCGGTGGAAGTGCTGGAAGAGCGGGGCTaGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGCCG +
Preference number: 2 (lower is better)
Translates to: SGSGTLPVEVLEERG*EEAPSVVTIARGGP
Trigger: CGGCCCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCCAGCACTTCCACCGGCAGAGTCCCAGAGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAATCCAAGGGGACCCTGTaGCTGAGGCCATGGAGAACC +
Preference number: 2 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRESKGTL*LRPWRT
Trigger: GGTTCTCCATGGCCTCAGCCACAGGGTCCCCTTGGA...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR TCA 90 bp GAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGGGGATAGTGTTTAAGTaGGCACTCAGGCTTCCTCTG +
Preference number: 2 (lower is better)
Translates to: EERGLEEAPSVVTIARGGGIVFK*ALRLPL
Trigger: CAGAGGAAGCCTGAGTGCTCACTTAAACACTATCCC...CCCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGACTCTGCCGGTGGAAGTaGTGGAAGAGCGGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: PTILAWESRVHRKLEEEGLCRWK*WKSGAW
Trigger: CCAAGCCCCGCTCTTCCAGCACTTCCACCGGCAGAG...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGTGGAAGAGCGGGGCTTaGAGGAAGCCCCCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKWKSGA*RKPPVW
Trigger: CCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCCA...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCTGTGGCTGAGGCCATaGAGAACCAGTGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNLWLRP*RTSARA
Trigger: GGCCCTGGCACTGGTTCTCCATGGCCTCAGCCACAG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp CAGAAAGAGAAAGCTTCTCTGTCTGACCTAAGGGTCCTCAGGAGAACACTTGAGGCCGAGGCCTTAGGGTaGGTTACCCGAGAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: QKEKASLSDLRVLRRTLEAEALG*VTREGS
Trigger: GCTGCCCTCTCGGGTAACTCACCCTAAGGCCTCGGC...CTCAAGTGTTCTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTCTCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCTCCAGTTATCAGAGGTaGCTGACATCTTCTGCCACT +
Preference number: 2 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTASSYQR*LTSSAT
Trigger: AGTGGCAGAAGATGTCAGTCACCTCTGATAACTGGA...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR TCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAATGAGACAGAGAGTGTaGAGGGCTATGCCGCTGGCA +
Preference number: 2 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPMRQRV*RAMPLA
Trigger: TGCCAGCGGCATAGCCCTTCACACTCTCTGTCTCAT...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGACAGGAGAGGGATCTaGGTCAGTCTCTCCCCATCT +
Preference number: 2 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKDRRGI*VSLSPS
Trigger: AGATGGGGAGAGACTGACTCAGATCCCTCTCCTGTC...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAAGAGGTCTCTGTGACTaGCTCTGGACTCAGCACGTG +
Preference number: 2 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPRGLCD*LWTQHV
Trigger: CACGTGCTGAGTCCAGAGGCAGTCACAGAGACCTCT...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAGCACGTGCAGCAGCTTaGGAGGATTTGAGCCAGTCT +
Preference number: 2 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPARAAA*EDLSQS
Trigger: AGACTGGCTCAAATCCTCCCAAGCTGCTGCACGTGC...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGACCAGTTAGGATCCCCTaGCCAGAGGTCTCTGTGACT +
Preference number: 2 (lower is better)
Translates to: PTILAWESRVHRKLEEEGPVRIP*PEVSVT
Trigger: AGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGG...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAACCCCCAGGGTGAAGTaGCTCTGGGACTCTGCCGGT +
Preference number: 2 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKTPRVK*LWDSAG
Trigger: ACCGGCAGAGTCCCAGAGCCACTTCACCCTGGGGGT...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCCAGCTTGGGAGGATTTaGGCCAGTCTCAAAAACTTT +
Preference number: 2 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAQLGRI*ASLKNF
Trigger: AAAGTTTTTGAGACTGGCTCAAATCCTCCCAAGCTG...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR TCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTGGCCAGAGGTCTCTGTaGCTGCCTCTGGACTCAGCA +
Preference number: 2 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAGQRSL*LPLDSA
Trigger: TGCTGAGTCCAGAGGCAGTCACAGAGACCTCTGGCC...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGACATCTTCTGCCACTaGCTTGAGTTCAGAAATTTA +
Preference number: 2 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWDIFCH*LEFRNL
Trigger: TAAATTTCTGAACTCAAGGCAGTGGCAGAAGATGTC...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTGCCATGGAGAACCAGTaGCAGGGCCCAAGAGACCCA +
Preference number: 2 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAAMENQ*QGPRDP
Trigger: TGGGTCTCTTGGGCCCTGGCACTGGTTCTCCATGGC...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGTCTGGACTCAGCACGTaGAGCAGCTTGGGAGGATTT +
Preference number: 2 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKSGLST*SSLGGF
Trigger: AAATCCTCCCAAGCTGCTGCACGTGCTGAGTCCAGA...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAGGATTTGTGGGCAATaGTGGCACTTGGTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNRICGQ*WHLVAR
Trigger: CCTGGCCACCAAGTGCCAGCATTGCCCACAAATCCT...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTCCGAGAGGGCAGCAGTaGTGGGCTTTCCCTCACTCA +
Preference number: 2 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAPRGQQ*WAFPHS
Trigger: TGAGTGAGGGAAAGCCCAGCACTGCTGCCCTCTCGG...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCCAGTGTGCAACTGGGTaGCTAAAGACCAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAQCATG*LKTKEK
Trigger: TTTTTCTTTGGTCTTTAGTCACCCAGTTGCACACTG...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR GCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGCCATGGAGAACCAGTaGCAGGGCCCAAGAGACCCA +
Preference number: 2 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRAMENQ*QGPRDP
Trigger: TGGGTCTCTTGGGCCCTGGCACTGGTTCTCCATGGC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR GCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCGACATCTTCTGCCACTaGCTTGAGTTCAGAAATTTA +
Preference number: 2 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTADIFCH*LEFRNL
Trigger: TAAATTTCTGAACTCAAGGCAGTGGCAGAAGATGTC...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR GCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAGTGTGAAGGGCTATaGCGCTGGCATCTCATAAAT +
Preference number: 2 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKECEGL*RWHLIN
Trigger: ATTTATGAGATGCCAGCGGCATAGCCCTTCACACTC...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGATGGGGTTCATATGAGTaGCAAGTTACCTGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: PTILAWESRVHRKLEEEGWGSYE*QVTWGN
Trigger: GTTTCCCCAGGTAACTTGGCACTCATATGAACCCCA...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCTCTGTGACTGCCTCTaGACTCAGCACGTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRLCDCL*TQHVQQ
Trigger: CTGCTGCACGTGCTGAGTCCAGAGGCAGTCACAGAG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAATGCTGGCACTTGGTaGCCAGGAGAATCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNNAGTW*PGESSD
Trigger: GTCAGAAGATTCTCCTGGCCACCAAGTGCCAGCATT...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGTTATCAGAGGTGACTaGCATCTTCTGCCACTGCCT +
Preference number: 2 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHVIRGD*HLLPLP
Trigger: AGGCAGTGGCAGAAGATGTCAGTCACCTCTGATAAC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR GCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGAGAGGTCTCTGTGACTaGCTCTGGACTCAGCACGTG +
Preference number: 2 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRRGLCD*LWTQHV
Trigger: CACGTGCTGAGTCCAGAGGCAGTCACAGAGACCTCT...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR CCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAATGCCAGTGTGCAACTaGGTGACTAAAGACCAAAGA +
Preference number: 2 (lower is better)
Translates to: PTILAWESRVHRKLEEEGMPVCN*VTKDQR
Trigger: TCTTTGGTCTTTAGTCACCCAGTTGCACACTGGCAT...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTGGCAATGCTGGCACTTaGTGGCCAGGAGAATCTTCT +
Preference number: 2 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAGNAGT*WPGESS
Trigger: AGAAGATTCTCCTGGCCACCAAGTGCCAGCATTGCC...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGACAGTGTGCAACTGGGTaGCTAAAGACCAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: PTILAWESRVHRKLEEEGQCATG*LKTKEK
Trigger: TTTTTCTTTGGTCTTTAGTCACCCAGTTGCACACTG...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACTCCAGTTATCAGAGGTaGCTGACATCTTCTGCCACT +
Preference number: 2 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHSSYQR*LTSSAT
Trigger: AGTGGCAGAAGATGTCAGTCACCTCTGATAACTGGA...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR TCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCAGCTTGGGAGGATTTaGGCCAGTCTCAAAAACTTT +
Preference number: 2 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNQLGRI*ASLKNF
Trigger: AAAGTTTTTGAGACTGGCTCAAATCCTCCCAAGCTG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCACTCAGGCTTCCTCTaGGGAAAAGAAATGACCAAA +
Preference number: 2 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNHSGFL*GKEMTK
Trigger: TTTGGTCATTTCTTTTCCTCAGAGGAAGCCTGAGTG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTACCCAACCTCACTCCTaGGGTAAAAGCAAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GALWVKAGWSGQGEWNLATQPHS*GKSKGG
Trigger: TCCTCCTTTGCTTTTACCCCAGGAGTGAGGTTGGGT...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAACTAATGGGAAAAGAGTaGGGCTTAGGTGTCAGAGTG +
Preference number: 2 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKLMGKE*GLGVRV
Trigger: CACTCTGACACCTAAGCCCCACTCTTTTCCCATTAG...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATAGGGTGAAGTGGCTCTaGGACTCTGCCGGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHRVKWL*DSAGGS
Trigger: ACTTCCACCGGCAGAGTCCCAGAGCCACTTCACCCT...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGTCGCCTTCAAATAGATaGAAAGTTCTGGTTTACACT +
Preference number: 2 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKSPSNR*KVLVYT
Trigger: AGTGTAAACCAGAACTTTTCATCTATTTGAAGGCGA...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp CAGAAAGAGAAAGCTTCTCTGTCTGACCTAAGGGTCCTCAGGAGAACACTTGAGGAGTGCCAAGTTACCTaGGGAAACCTAACAACTTAC +
Preference number: 2 (lower is better)
Translates to: QKEKASLSDLRVLRRTLEECQVT*GNLTTY
Trigger: GTAAGTTGTTAGGTTTCCCCAGGTAACTTGGCACTC...CTCAAGTGTTCTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTCTCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTGCCCAGGAGAGGAGATaGGCTGAGTACTTATTAAAA +
Preference number: 2 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAAQERR*AEYLLK
Trigger: TTTTAATAAGTACTCAGCCCATCTCCTCTCCTGGGC...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAATAAATACAACAAGTaGAAGGTACCTGTCCCATTC +
Preference number: 2 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNNKYNK*KVPVPF
Trigger: GAATGGGACAGGTACCTTCCACTTGTTGTATTTATT...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR GCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATGTCAGTAGGAACGGGTaGTTTATGGGTAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHVSRNG*FMGKGR
Trigger: CCTGCCTTTACCCATAAAGCACCCGTTCCTACTGAC...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATAACCCAAGGGTGCCCTaGTTAATGGAAGTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHNPRVP*LMEVWG
Trigger: TCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTT...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTACATGGAAAAAGGTCTaGGAGCAGCCAAATTTCATT +
Preference number: 2 (lower is better)
Translates to: GALWVKAGWSGQGEWNLATWKKV*EQPNFI
Trigger: AATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGT...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGAATAAATACAACAAGTaGAAGGTACCTGTCCCATTC +
Preference number: 2 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRNKYNK*KVPVPF
Trigger: GAATGGGACAGGTACCTTCCACTTGTTGTATTTATT...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR CCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATATAGATGAAAAGTTCTaGTTTACACTCCCCCACCGC +
Preference number: 2 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHIDEKF*FTLPHR
Trigger: GCGGTGGGGGAGTGTAAACCAGAACTTTTCATCTAT...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR TCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACACACAAACATATTCTTaGAATGGAAGGGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: GRHGKRSGSSQISLIPINTQTYS*NGRGKE
Trigger: CTCCTTCCCCCTTCCATTTCAAGAATATGTTTGTGT...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR GCA 72 bp ACAGCCCACCCCCAGGGTGAAGTGGCTCTGGGACTCTaGCGGTGGAAGTGCTGGAAGAGCGGGGCTTGGAGG +
Preference number: 3 (lower is better)
Translates to: TAHPQGEVALGL*RWKCWKSGAWR
Trigger: CCTCCAAGCCCCGCTCTTCCAGCACTTCCACCGGCAGAGTCCCAGAGCCACTTCACCCTGGGGGTGGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp CACCCCCAGGGTGAAGTGGCTCTGGGACTCTGCCGGTaGAAGTGCTGGAAGAGCGGGGCTTGGAGGAAGCCC +
Preference number: 3 (lower is better)
Translates to: HPQGEVALGLCR*KCWKSGAWRKP
Trigger: GGGCTTCCTCCAAGCCCCGCTCTTCCAGCACTTCCACCGGCAGAGTCCCAGAGCCACTTCACCCTGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp TTCCCTGAAATAGAGCAGGTCCTGAGCAGAGCTGACTaGGGGCCACAGCCCACCCCCAGGGTGAAGTGGCTC +
Preference number: 3 (lower is better)
Translates to: FPEIEQVLSRAD*GPQPTPRVKWL
Trigger: GAGCCACTTCACCCTGGGGGTGGGCTGTGGCCCCCAGTCAGCTCTGCTCAGGACCTGCTCTATTTCAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR GCA 72 bp GCCAATTTCCACCTGCCCCCAGAGGTTTGGGATCAGTaGCAACCATCCTGGCCTGGGAAAGTAGGGTGCATA +
Preference number: 3 (lower is better)
Translates to: ANFHLPPEVWDQ*QPSWPGKVGCI
Trigger: TATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCACTGATCCCAAACCTCTGGGGGCAGGTGGAAATTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CAA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAAGCACGTGCAGCAGCTaGGGAGGATTTGAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPSTCSS*GGFEPV
Trigger: GACTGGCTCAAATCCTCCCAAGCTGCTGCACGTGCT...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CAA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTCTGGAAGAGCGGGGCTaGGAGGAAGCCCCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: GALWVKAGWSGQGEWNLALEERG*EEAPSV
Trigger: CACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCCAG...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAAAAGGGACAGCTTACTaGCTCTCTGTCTCAGGTTTA +
Preference number: 3 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREKGTAY*LSVSGL
Trigger: TAAACCTGAGACAGAGAGCAAGTAAGCTGTCCCTTT...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR-3UTR CAA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTCCTGCCCCCAGAGGTTaGGGATCAGTGCCAACCATC +
Preference number: 3 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAPAPRG*GSVPTI
Trigger: GATGGTTGGCACTGATCCCAAACCTCTGGGGGCAGG...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CAA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTGCCTTGGTTTCCCATTaGTGCATTCAGGGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAALVSH*CIQGLC
Trigger: GCAGAGGCCCTGAATGCACAAATGGGAAACCAAGGC...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CAA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACGAGCCTCTCTGTGCCTaGGTTTCCCATTTGTGCATT +
Preference number: 3 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNEPLCA*VSHLCI
Trigger: AATGCACAAATGGGAAACCAAGGCACAGAGAGGCTC...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp AGAGTTTGGAACTACCTCTCCAACCCAAGGGTGCCCTaGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCC +
Preference number: 3 (lower is better)
Translates to: RVWNYLSNPRVP*LMEVWGVTSNP
Trigger: GGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTCCAAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp CCCTCTGATCAGATAGGGACAGTCCCAGCTGGTGCATaGTATGAATGGGACAGATCTTCAGGCCAACATCTT +
Preference number: 3 (lower is better)
Translates to: PSDQIGTVPAGA*YEWDRSSGQHL
Trigger: AAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGACTGTCCCTATCTGATCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR-3UTR CAA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAAAAGGGACAGCTTACTaGCTCTCTGTCTCAGGTTTA +
Preference number: 3 (lower is better)
Translates to: PTILAWESRVHRKLEEEGKGTAY*LSVSGL
Trigger: TAAACCTGAGACAGAGAGCAAGTAAGCTGTCCCTTT...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR TCA 72 bp AGGGCCCAAGAGACCCATTTTTCCAGTTATCAGAGGTaGCTGACATCTTCTGCCACTGCCTTGAGTTCAGAA +
Preference number: 3 (lower is better)
Translates to: RAQETHFSSYQR*LTSSATALSSE
Trigger: TTCTGAACTCAAGGCAGTGGCAGAAGATGTCAGTCACCTCTGATAACTGGAAAAATGGGTCTCTTGGGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR CCA 72 bp GCCCAGGAGAGGAGATGGGCTGAGTACTTATTAAAATaGGGTTCATATGAGTGCCAAGTTACCTGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: AQERRWAEYLLK*GSYECQVTWGN
Trigger: GTTTCCCCAGGTAACTTGGCACTCATATGAACCCCATTTTAATAAGTACTCAGCCCATCTCCTCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp AGTAAAGAGATTTGGTCAGTAGGAACGGGTGCTTTATaGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGG +
Preference number: 3 (lower is better)
Translates to: SKEIWSVGTGAL*VKAGWSGQGEW
Trigger: CCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACCCGTTCCTACTGACCAAATCTCTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp TTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATaGAATTTAGCTGCTACGGAATCAGAATCCACCTCT +
Preference number: 3 (lower is better)
Translates to: LWVKAGWSGQGE*NLAATESESTS
Trigger: AGAGGTGGATTCTGATTCCGTAGCAGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp AAGAAAACCTTCAGCCCAGAATGTAGTATAGATCAATaGAGAGTTTGGAACTACCTCTCCAACCCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: KKTFSPECSIDQ*RVWNYLSNPRV
Trigger: CACCCTTGGGTTGGAGAGGTAGTTCCAAACTCTCCATTGATCTATACTACATTCTGGGCTGAAGGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
3UTR CCA 72 bp AGACAAAGGAGAAGCTACACTAATAAATACAACAAGTaGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTG +
Preference number: 3 (lower is better)
Translates to: RQRRSYTNKYNK*KVPVPFLKGFV
Trigger: CACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTGTTGTATTTATTAGTGTAGCTTCTCCTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR CCA 72 bp TTATTAAAATGGGGTTCATATGAGTGCCAAGTTACCTaGGGAAACCTAACAACTTACAAATTCTCCAGGTTT +
Preference number: 3 (lower is better)
Translates to: LLKWGSYECQVT*GNLTTYKFSRF
Trigger: AAACCTGGAGAATTTGTAAGTTGTTAGGTTTCCCCAGGTAACTTGGCACTCATATGAACCCCATTTTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGCTTGATACGAGGCGGTaGTCGCTGGCCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: EERGLEEAPSVVTIARGGLDTRR*SLALGH
Trigger: GTGCCCCAGGGCCAGCGACCACCGCCTCGTATCAAG...CCCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGCTCTGCCGGTGGAAGTaGTGGAAGAGCGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EERGLEEAPSVVTIARGGLCRWK*WKSGAW
Trigger: CCAAGCCCCGCTCTTCCAGCACTTCCACCGGCAGAG...CCCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAATCACAGATGCTGCAATaGGAGGCCCGGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRESQMLQ*EARGGR
Trigger: CCGGCCTCCCCGGGCCTCCCATTGCAGCATCTGTGA...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGTGGAAGAGCGGGGCTTaGAGGAAGCCCCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWWKSGA*RKPPVW
Trigger: CCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCCA...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAACTCGGCCGGCAGCTaGCGGCAGGAAACGGACCGT +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTANSAGS*RQETDR
Trigger: ACGGTCCGTTTCCTGCCGTCAGCTGCCGGCCGAGTT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCCTTGATACGAGGCGGTaGTCGCTGGCCCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTALDTRR*SLALGH
Trigger: GTGCCCCAGGGCCAGCGACCACCGCCTCGTATCAAG...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGGGGGCTGGGCTCTGTaGCAAGAGGCTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREGGWAL*QEAATG
Trigger: ACCAGTAGCAGCCTCTTGCCACAGAGCCCAGCCCCC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAACTGTGGCTGAGGCCATaGAGAACCAGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRELWLRP*RTSARA
Trigger: GGCCCTGGCACTGGTTCTCCATGGCCTCAGCCACAG...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
3UTR CAA 72 bp GGGACTCTGCCGGTGGAAGTGCTGGAAGAGCGGGGCTaGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GTLPVEVLEERG*EEAPSVVTIAR
Trigger: TCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCCAGCACTTCCACCGGCAGAGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCGGGGGCTGGGCTCTGTaGCAAGAGGCTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAGGWAL*QEAATG
Trigger: ACCAGTAGCAGCCTCTTGCCACAGAGCCCAGCCCCC...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGCTGCCCCCAGAGGTTTaGGATCAGTGCCAACCATCC +
Preference number: 4 (lower is better)
Translates to: EERGLEEAPSVVTIARGGLPPEV*DQCQPS
Trigger: GGATGGTTGGCACTGATCCCAAACCTCTGGGGGCAG...CCCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGCCTCAGGAGAACACTTaGGGTAAGGTGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EERGLEEAPSVVTIARGGPQENT*GKVREE
Trigger: CTCCTCCCTCACCTTACCTCAAGTGTTCTCCTGAGG...CCCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCCCGAGAGGGCAGCAGTaGTGGGCTTTCCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAPRGQQ*WAFPHS
Trigger: TGAGTGAGGGAAAGCCCAGCACTGCTGCCCTCTCGG...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCTGGGGGCTCTGGAGGTaGCATCTCTTCGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAWGLWR*HLFGSA
Trigger: AGCACTCCCGAAGAGATGCCACCTCCAGAGCCCCCA...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGCACGTGCAGCAGCTTaGGAGGATTTGAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWARAAA*EDLSQS
Trigger: AGACTGGCTCAAATCCTCCCAAGCTGCTGCACGTGC...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGCTGCTACTGGTCTCTTaGGTACTGGGAGGTCGACTT +
Preference number: 4 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWLLLVS*VLGGRL
Trigger: AAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAG...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGCCGAGGCCTTAGGGTaGGTTACCCGAGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKAEALG*VTREGS
Trigger: GCTGCCCTCTCGGGTAACTCACCCTAAGGCCTCGGC...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAGTTGTCACAGATGCTaGAATGGGAGGCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTASCHRC*NGRPGE
Trigger: CTCCCCGGGCCTCCCATTGCAGCATCTGTGACAACT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCGCATCTCTTCGGGAGTaGTGCTGTCCTCCGGCATCT +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAASLRE*CCPPAS
Trigger: AGATGCCGGAGGACAGCAGCACTCCCGAAGAGATGC...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAAGGATTTGTGGGCAATaGTGGCACTTGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRERICGQ*WHLVAR
Trigger: CCTGGCCACCAAGTGCCAGCATTGCCCACAAATCCT...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGCACGTGCAGCAGCTTaGGAGGATTTGAGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREARAAA*EDLSQS
Trigger: AGACTGGCTCAAATCCTCCCAAGCTGCTGCACGTGC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGGCAATGCTGGCACTTaGTGGCCAGGAGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWGNAGT*WPGESS
Trigger: AGAAGATTCTCCTGGCCACCAAGTGCCAGCATTGCC...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGCCACGAGGAAAGTATaGAATCCAGTCAGTCCCACG +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREATRKV*NPVSPT
Trigger: CGTGGGACTGACTGGATTTCATACTTTCCTCGTGGC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGTTATCAGAGGTGACTaGCATCTTCTGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWVIRGD*HLLPLP
Trigger: AGGCAGTGGCAGAAGATGTCAGTCACCTCTGATAAC...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCCTGCTACTGGTCTCTTaGGTACTGGGAGGTCGACTT +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTALLLVS*VLGGRL
Trigger: AAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAG...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGGGATAGTGTTTAAGTaGGCACTCAGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREGIVFK*ALRLPL
Trigger: CAGAGGAAGCCTGAGTGCTCACTTAAACACTATCCC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGCTTTGAAATCACGTTaGCTGCTATTCCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREALKSR*LLFLPL
Trigger: CAGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAATCTGTGGCAAGAGGCTaGTACTGGTCTCTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRESVARG*YWSLEY
Trigger: GTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGA...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAGCCATGGAGAACCAGTaGCAGGGCCCAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPAMENQ*QGPRDP
Trigger: TGGGTCTCTTGGGCCCTGGCACTGGTTCTCCATGGC...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGGTGGTCGCTGGCCCTaGGGCACCGCACCATTGGTA +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHGGRWP*GTAPLV
Trigger: TACCAATGGTGCGGTGCCCCAGGGCCAGCGACCACC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGTGGTCTCTTGAGTACTaGGAGGTCGACTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: EERGLEEAPSVVTIARGGWSLEY*EVDFHF
Trigger: AAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCA...CCCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCGGCAATGCTGGCACTTaGTGGCCAGGAGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAGNAGT*WPGESS
Trigger: AGAAGATTCTCCTGGCCACCAAGTGCCAGCATTGCC...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAAACCCAAGGGTGCCCTaGTTAATGGAAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRENPRVP*LMEVWG
Trigger: TCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTT...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGCTTCTCTGTCTGACCTAAGGGTCCTCAGGAGAACACTTGAGGAGGCTGTCTCCTCCTaGCAAGGGGCCCCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: QKEKASLSDLRVLRRTLEEAVSS*QGAPVV
Trigger: GACCACTGGGGCCCCTTGTCAGGAGGAGACAGCCTC...CTCAAGTGTTCTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTCTCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAGCTGGTGCATGGTATaGATGGGACAGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTASWCMV*MGQIFR
Trigger: CCTGAAGATCTGTCCCATTCATACCATGCACCAGCT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAGCATCTCTTCGGGAGTaGTGCTGTCCTCCGGCATCT +
Preference number: 4 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPASLRE*CCPPAS
Trigger: AGATGCCGGAGGACAGCAGCACTCCCGAAGAGATGC...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGTCGGCAGCCAAAGGTaGCAGCGACTTGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHVGSQR*QRLVLP
Trigger: GGGGAGGACAAGTCGCTGCCACCTTTGGCTGCCGAC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAAAGGTGTTCCTGCCTaGGAGTTTCTCCCATTTCCG +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAKGVPA*EFLPFP
Trigger: CGGAAATGGGAGAAACTCCCAGGCAGGAACACCTTT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACACCCCCAGGGTGAAGTaGCTCTGGGACTCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHTPRVK*LWDSAG
Trigger: ACCGGCAGAGTCCCAGAGCCACTTCACCCTGGGGGT...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCTGAGCAGAGCTGACTaGGGGCCACAGCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRLSRAD*GPQPTP
Trigger: GGGGGTGGGCTGTGGCCCCCAGTCAGCTCTGCTCAG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCCCACCATCACAGACATaGTTGGAATTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAPPSQT*LEFLLQ
Trigger: TTGGAGCAGGAATTCCAATCATGTCTGTGATGGTGG...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACTTTGCCGGGCCATCATaGCGCGGCCATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNFAGPS*RGHHSK
Trigger: TTTGCTGTGATGGCCGCGTCATGATGGCCCGGCAAA...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAACCACATAGACGATGTTaGAGGCGAAGACATAGATTG +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREPHRRC*RRRHRL
Trigger: CAATCTATGTCTTCGCCTTCAACATCGTCTATGTGG...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGGCCAGAGGTCTCTGTaGCTGCCTCTGGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHGQRSL*LPLDSA
Trigger: TGCTGAGTCCAGAGGCAGTCACAGAGACCTCTGGCC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAGACAGGAGAGGGATCTaGGTCAGTCTCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPDRRGI*VSLSPS
Trigger: AGATGGGGAGAGACTGACTCAGATCCCTCTCCTGTC...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGCCATGGAGAACCAGTaGCAGGGCCCAAGAGACCCA +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHAMENQ*QGPRDP
Trigger: TGGGTCTCTTGGGCCCTGGCACTGGTTCTCCATGGC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCACAGCCAATTTCCACCTaGCCCCAGAGGTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPQPIST*PQRFGI
Trigger: GATCCCAAACCTCTGGGGGCAGGTGGAAATTGGCTG...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAATGCTATTCCTGCCGCTaGGTCAAACATCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRECYSCR*VKHHQK
Trigger: CTTTTGATGATGTTTGACCCAGCGGCAGGAATAGCA...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGATTCCTGCTCCAAAATaGGTTTTGCGATTACACGAG +
Preference number: 4 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWIPAPK*VLRLHE
Trigger: CTCGTGTAATCGCAAAACCCATTTTGGAGCAGGAAT...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CAGAAAGAGAAAGCTTCTCTGTCTGACCTAAGGGTCCTCAGGAGAACACTTGAGTGGCTCTGGGGGCTCTaGAGGTGGCATCTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: QKEKASLSDLRVLRRTLEWLWGL*RWHLFG
Trigger: CCCGAAGAGATGCCACCTCCAGAGCCCCCAGAGCCA...CTCAAGTGTTCTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTCTCTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGCCAGTTAGGATCCCCTaGCCAGAGGTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKPVRIP*PEVSVT
Trigger: AGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGG...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAATGCCGGTGGAAGTGCTaGAAGAGCGGGGCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKCRWKC*KSGAWR
Trigger: CCTCCAAGCCCCGCTCTTCCAGCACTTCCACCGGCA...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAACTGTCCATGATCCTTTaGTGTCTTCATTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRELSMIL*CLHWLS
Trigger: AGACAACCAATGAAGACATCAAAGGATCATGGACAG...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAAGAAATACCAGAGAGTaGAAAACCCCCAACACATAC +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRERNTRE*KTPNTY
Trigger: GTATGTGTTGGGGGTTTTTCACTCTCTGGTATTTCT...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAGAAAAGGAAGAGCATaGCAGCAAATACAGGGATGG +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTARKGRA*QQIQGW
Trigger: CCATCCCTGTATTTGCTGCCATGCTCTTCCTTTTCT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTTTCGATCCAGCACACTaGGGGGCAAGGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAFDPAH*GARGHT
Trigger: TGTGTGGCCCCTTGCCCCCCAGTGTGCTGGATCGAA...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAGTGTTCTGTGGGGGCTaGGCTCTGTGGCAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKVFCGG*ALWQEA
Trigger: AGCCTCTTGCCACAGAGCCCAGCCCCCACAGAACAC...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGTGGCTCTGGGGGCTCTaGAGGTGGCATCTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRWLWGL*RWHLFG
Trigger: CCCGAAGAGATGCCACCTCCAGAGCCCCCAGAGCCA...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCTGTGGCTGAGGCCATaGAGAACCAGTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRLWLRP*RTSARA
Trigger: GGCCCTGGCACTGGTTCTCCATGGCCTCAGCCACAG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACCTCTGTGACTGCCTCTaGACTCAGCACGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHLCDCL*TQHVQQ
Trigger: CTGCTGCACGTGCTGAGTCCAGAGGCAGTCACAGAG...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGAAGGGCTATGCCGCTaGCATCTCATAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREEGLCR*HLINSY
Trigger: ATAAGAATTTATGAGATGCCAGCGGCATAGCCCTTC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCCAACCATCCTGGCCTaGGAAAGTAGGGTGCATAGG +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNPTILA*ESRVHR
Trigger: CCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAACAATTTTCAAAGATTTaGGGGCCACATAGACGATGT +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREQFSKI*GPHRRC
Trigger: ACATCGTCTATGTGGCCCTCAAATCTTTGAAAATTG...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAATTCTTCCCTGTCCATaGTCCTTTGATGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREILPCP*SFDVFI
Trigger: AATGAAGACATCAAAGGATCATGGACAGGGAAGAAT...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGGCCAGAGGTCTCTGTaGCTGCCTCTGGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRGQRSL*LPLDSA
Trigger: TGCTGAGTCCAGAGGCAGTCACAGAGACCTCTGGCC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACAGAGGTCTCTGTGACTaGCTCTGGACTCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHRGLCD*LWTQHV
Trigger: CACGTGCTGAGTCCAGAGGCAGTCACAGAGACCTCT...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACAGGATTTGTGGGCAATaGTGGCACTTGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHRICGQ*WHLVAR
Trigger: CCTGGCCACCAAGTGCCAGCATTGCCCACAAATCCT...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGTCCAAGGGGACCCTGTaGCTGAGGCCATGGAGAACC +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRSKGTL*LRPWRT
Trigger: GGTTCTCCATGGCCTCAGCCACAGGGTCCCCTTGGA...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCATGGACATGAAGAAATaGCTCACCACAGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAMDMKK*LTTANF
Trigger: GAAATTGGCTGTGGTGAGCCATTTCTTCATGTCCAT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCACATTGGTTGTCTGGTTaGGAGCCACGAGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPHWLSG*EPRGKY
Trigger: ATACTTTCCTCGTGGCTCTCAACCAGACAACCAATG...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACCTCCGGCATCTCATTTaGGTTCAGGTGTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHLRHLI*VQVFCG
Trigger: CCCACAGAACACCTGAACTCAAATGAGATGCCGGAG...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAATGAGACAGAGAGTGTaGAGGGCTATGCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKMRQRV*RAMPLA
Trigger: TGCCAGCGGCATAGCCCTTCACACTCTCTGTCTCAT...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACGTTGCCTGCTATTCCTaGCGCTGGGTCAAACATCAT +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNVACYS*RWVKHH
Trigger: ATGATGTTTGACCCAGCGGCAGGAATAGCAGGCAAC...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAATCTCTTCGGGAGTGCTaGTGTCCTCCGGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKSLREC*CPPASH
Trigger: ATGAGATGCCGGAGGACAGCAGCACTCCCGAAGAGA...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCAGAGTGTGAAGGGCTATaGCGCTGGCATCTCATAAAT +
Preference number: 4 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPECEGL*RWHLIN
Trigger: ATTTATGAGATGCCAGCGGCATAGCCCTTCACACTC...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAATCTGGTTGTTTATCTaGAAATTCTTGATACGAGGC +
Preference number: 4 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREIWLFI*KFLIRG
Trigger: GCCTCGTATCAAGAATTTCCAGATAAACAACCAGAT...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACATTTGTGGGCAATGCTaGCACTTGGTGGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHICGQC*HLVARR
Trigger: TCTCCTGGCCACCAAGTGCCAGCATTGCCCACAAAT...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAACTCCGGCATCTCATTTaGGTTCAGGTGTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKLRHLI*VQVFCG
Trigger: CCCACAGAACACCTGAACTCAAATGAGATGCCGGAG...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGCAGCTTGGGAGGATTTaGGCCAGTCTCAAAAACTTT +
Preference number: 4 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKQLGRI*ASLKNF
Trigger: AAAGTTTTTGAGACTGGCTCAAATCCTCCCAAGCTG...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGATGAGACAGAGAGTGTaGAGGGCTATGCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRMRQRV*RAMPLA
Trigger: TGCCAGCGGCATAGCCCTTCACACTCTCTGTCTCAT...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGTTGCCTGCTATTCCTaGCGCTGGGTCAAACATCAT +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHVACYS*RWVKHH
Trigger: ATGATGTTTGACCCAGCGGCAGGAATAGCAGGCAAC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTTCTGGACTCAGCACGTaGAGCAGCTTGGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: GALWVKAGWSGQGEWNLASGLST*SSLGGF
Trigger: AAATCCTCCCAAGCTGCTGCACGTGCTGAGTCCAGA...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAAGAAAAGGAAGAGCATaGCAGCAAATACAGGGATGG +
Preference number: 4 (lower is better)
Translates to: PTILAWESRVHRKLEEEGRKGRA*QQIQGW
Trigger: CCATCCCTGTATTTGCTGCCATGCTCTTCCTTTTCT...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCTAATGGGAAAAGAGTaGGGCTTAGGTGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNLMGKE*GLGVRV
Trigger: CACTCTGACACCTAAGCCCCACTCTTTTCCCATTAG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGAACATATTCTTGAAATaGAAGGGGGAAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKNIFLK*KGEGGG
Trigger: GCCTCCTCCTTCCCCCTTCCATTTCAAGAATATGTT...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAGCCCAGGAGAGGAGATaGGCTGAGTACTTATTAAAA +
Preference number: 4 (lower is better)
Translates to: PTILAWESRVHRKLEEEGAQERR*AEYLLK
Trigger: TTTTAATAAGTACTCAGCCCATCTCCTCTCCTGGGC...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACACCCAACCTCACTCCTaGGGTAAAAGCAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHTQPHS*GKSKGG
Trigger: TCCTCCTTTGCTTTTACCCCAGGAGTGAGGTTGGGT...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGTCAGGACAGGGAGAATaGAATTTAGCTGCTACGGAA +
Preference number: 4 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKSGQGE*NLAATE
Trigger: TTCCGTAGCAGCTAAATTCCATTCTCCCTGTCCTGA...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGAAAGCTTCTCTGTCTaGCCTAAGGGTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRESFSV*PKGPQE
Trigger: CTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAGGAAGGCCTCAGAGCTaGATGGACATGAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKGRPQS*MDMKKW
Trigger: CCATTTCTTCATGTCCATTCAGCTCTGAGGCCTTCC...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGAGTGTGAAGGGCTATaGCGCTGGCATCTCATAAAT +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHECEGL*RWHLIN
Trigger: ATTTATGAGATGCCAGCGGCATAGCCCTTCACACTC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACTGGGGTTCATATGAGTaGCAAGTTACCTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHWGSYE*QVTWGN
Trigger: GTTTCCCCAGGTAACTTGGCACTCATATGAACCCCA...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAGTCAGTAGGAACGGGTaGTTTATGGGTAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKVSRNG*FMGKGR
Trigger: CCTGCCTTTACCCATAAAGCACCCGTTCCTACTGAC...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACTGGTCTCTTGAGTACTaGGAGGTCGACTTCCACTTT +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHWSLEY*EVDFHF
Trigger: AAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCA...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp CAGAAAGAGAAAGCTTCTCTGTCTGACCTAAGGGTCCTCAGGAGAACACTTGAGAATGCTGGCACTTGGTaGCCAGGAGAATCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QKEKASLSDLRVLRRTLENAGTW*PGESSD
Trigger: GTCAGAAGATTCTCCTGGCCACCAAGTGCCAGCATT...CTCAAGTGTTCTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTCTCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATAGAGGGCAGCAGTGCTaGGCTTTCCCTCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHRGQQC*AFPHSA
Trigger: GGCTGAGTGAGGGAAAGCCCAGCACTGCTGCCCTCT...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAGGAACGGGTGCTTTATaGGTAAAGGCAGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKGTGAL*VKAGWS
Trigger: TGACCATCCTGCCTTTACCCATAAAGCACCCGTTCC...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACAAGGGGGAGCCGGCCTaGAAGAACAAAGATCAAAAT +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHKGEPA*KNKDQN
Trigger: ATTTTGATCTTTGTTCTTCCAGGCCGGCTCCCCCTT...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371064.7
CDS-3UTR TCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCAGTGTGCAACTGGGTaGCTAAAGACCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNQCATG*LKTKEK
Trigger: TTTTTCTTTGGTCTTTAGTCACCCAGTTGCACACTG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGTTATCAGAGGTGACTaGCATCTTCTGCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRVIRGD*HLLPLP
Trigger: AGGCAGTGGCAGAAGATGTCAGTCACCTCTGATAAC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAATCCAGTTATCAGAGGTaGCTGACATCTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKSSYQR*LTSSAT
Trigger: AGTGGCAGAAGATGTCAGTCACCTCTGATAACTGGA...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACCAGCTTGGGAGGATTTaGGCCAGTCTCAAAAACTTT +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHQLGRI*ASLKNF
Trigger: AAAGTTTTTGAGACTGGCTCAAATCCTCCCAAGCTG...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGGGATAGTGTTTAAGTaGGCACTCAGGCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRGIVFK*ALRLPL
Trigger: CAGAGGAAGCCTGAGTGCTCACTTAAACACTATCCC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTAAAATGGGGTTCATATaGGTGCCAAGTTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAKMGFI*VPSYLG
Trigger: CCCCAGGTAACTTGGCACTCATATGAACCCCATTTT...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGCTTTGAAATCACGTTaGCTGCTATTCCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRALKSR*LLFLPL
Trigger: CAGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGCTCCAAAATGGGTTTTaGGATTACACGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKLQNGF*DYTREE
Trigger: TTCTTCTCTCGTGTAATCGCAAAACCCATTTTGGAG...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGACATCTTCTGCCACTaGCTTGAGTTCAGAAATTTA +
Preference number: 4 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKDIFCH*LEFRNL
Trigger: TAAATTTCTGAACTCAAGGCAGTGGCAGAAGATGTC...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGGTGGTCGCTGGCCCTaGGGCACCGCACCATTGGTA +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQGGRWP*GTAPLV
Trigger: TACCAATGGTGCGGTGCCCCAGGGCCAGCGACCACC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATCACAGATGCTGCAATaGGAGGCCCGGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQSQMLQ*EARGGR
Trigger: CCGGCCTCCCCGGGCCTCCCATTGCAGCATCTGTGA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATCTCTGTGACTGCCTCTaGACTCAGCACGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHLCDCL*TQHVQQ
Trigger: CTGCTGCACGTGCTGAGTCCAGAGGCAGTCACAGAG...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCTGGGAAGTATGAGATaGGAATTGATAGGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNLGSMR*ELIGSL
Trigger: AAGACTCCCTATCAATTCCCATCTCATACTTCCCAG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCAAAGTAAAGAGATTTaGTCAGTAGGAACGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNQSKEI*SVGTGA
Trigger: AGCACCCGTTCCTACTGACCAAATCTCTTTACTTTG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCCACCATCACAGACATaGTTGGAATTCCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRPPSQT*LEFLLQ
Trigger: TTGGAGCAGGAATTCCAATCATGTCTGTGATGGTGG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGCTTCTCTGTCTGACCTAAGGGTCCTCAGGAGAACACTTGAGCCACATAGACGATGTTaGAGGCGAAGACATAGATTG +
Preference number: 4 (lower is better)
Translates to: QKEKASLSDLRVLRRTLEPHRRC*RRRHRL
Trigger: CAATCTATGTCTTCGCCTTCAACATCGTCTATGTGG...CTCAAGTGTTCTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTCTCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACCAATTTTCAAAGATTTaGGGGCCACATAGACGATGT +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNQFSKI*GPHRRC
Trigger: ACATCGTCTATGTGGCCCTCAAATCTTTGAAAATTG...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACCTGTCCATGATCCTTTaGTGTCTTCATTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHLSMIL*CLHWLS
Trigger: AGACAACCAATGAAGACATCAAAGGATCATGGACAG...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAACACTCAGGCTTCCTCTaGGGAAAAGAAATGACCAAA +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKHSGFL*GKEMTK
Trigger: TTTGGTCATTTCTTTTCCTCAGAGGAAGCCTGAGTG...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACAGTTGTCACAGATGCTaGAATGGGAGGCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINSCHRC*NGRPGE
Trigger: CTCCCCGGGCCTCCCATTGCAGCATCTGTGACAACT...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATAGAGGTCTCTGTGACTaGCTCTGGACTCAGCACGTG +
Preference number: 4 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHRGLCD*LWTQHV
Trigger: CACGTGCTGAGTCCAGAGGCAGTCACAGAGACCTCT...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGCCCTAAACCAGCTGTaGCAACCGCCCACCACTGGC +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQALNQL*QPPTTG
Trigger: GCCAGTGGTGGGCGGTTGCCACAGCTGGTTTAGGGC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAATCTGGTTGTTTATCTaGAAATTCTTGATACGAGGC +
Preference number: 4 (lower is better)
Translates to: PTILAWESRVHRKLEEEGIWLFI*KFLIRG
Trigger: GCCTCGTATCAAGAATTTCCAGATAAACAACCAGAT...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGTCCACTTTCCTCCAGTaGCAAAATACCCCTTCGATC +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRSTFLQ*QNTPSI
Trigger: GATCGAAGGGGTATTTTGCCACTGGAGGAAAGTGGA...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTATGCCAGTGTGCAACTaGGTGACTAAAGACCAAAGA +
Preference number: 4 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAMPVCN*VTKDQR
Trigger: TCTTTGGTCTTTAGTCACCCAGTTGCACACTGGCAT...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp CCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGGAAATAAATACAACAAGTaGAAGGTACCTGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: PTILAWESRVHRKLEEEGNKYNK*KVPVPF
Trigger: GAATGGGACAGGTACCTTCCACTTGTTGTATTTATT...TCCTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAACTGGGACTCTGCCGGTaGAAGTGCTGGAAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQLGLCR*KCWKSG
Trigger: CCCGCTCTTCCAGCACTTCCACCGGCAGAGTCCCAG...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACAGGGTGAAGTGGCTCTaGGACTCTGCCGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINRVKWL*DSAGGS
Trigger: ACTTCCACCGGCAGAGTCCCAGAGCCACTTCACCCT...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTATAGATGAAAAGTTCTaGTTTACACTCCCCCACCGC +
Preference number: 4 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAIDEKF*FTLPHR
Trigger: GCGGTGGGGGAGTGTAAACCAGAACTTTTCATCTAT...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GAACTACCTCTCCAACCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACACATGGAAAAAGGTCTaGGAGCAGCCAAATTTCATT +
Preference number: 4 (lower is better)
Translates to: ELPLQPKGALVNGSLGSNTWKKV*EQPNFI
Trigger: AATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGT...GTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGGTTGGAGAGGTAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAGAGTGCCAAGTTACCTaGGGAAACCTAACAACTTAC +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKECQVT*GNLTTY
Trigger: GTAAGTTGTTAGGTTTCCCCAGGTAACTTGGCACTC...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTATAAATCTTCTTCCCTaGAATAGAGCAGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GALWVKAGWSGQGEWNLAINLLP*NRAGPE
Trigger: CTCAGGACCTGCTCTATTTCAGGGAAGAAGATTTAT...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp CAGAAAGAGAAAGCTTCTCTGTCTGACCTAAGGGTCCTCAGGAGAACACTTGAGACACAAACATATTCTTaGAATGGAAGGGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QKEKASLSDLRVLRRTLETQTYS*NGRGKE
Trigger: CTCCTTCCCCCTTCCATTTCAAGAATATGTTTGTGT...CTCAAGTGTTCTCCTGAGGACCCTTAGGTCAGACAGAGAAGCTTTCTCTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGTGGCTCTGGGACTCTaGCGGTGGAAGTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQVALGL*RWKCWK
Trigger: CTTCCAGCACTTCCACCGGCAGAGTCCCAGAGCCAC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATTCGATCCAGCACACTaGGGGGCAAGGGGCCACACA +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQFDPAH*GARGHT
Trigger: TGTGTGGCCCCTTGCCCCCCAGTGTGCTGGATCGAA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGTGTTCTGTGGGGGCTaGGCTCTGTGGCAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQVFCGG*ALWQEA
Trigger: AGCCTCTTGCCACAGAGCCCAGCCCCCACAGAACAC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATGGGGGCTCTGGAGGTaGCATCTCTTCGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQWGLWR*HLFGSA
Trigger: AGCACTCCCGAAGAGATGCCACCTCCAGAGCCCCCA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATCCAAGGGGACCCTGTaGCTGAGGCCATGGAGAACC +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQSKGTL*LRPWRT
Trigger: GGTTCTCCATGGCCTCAGCCACAGGGTCCCCTTGGA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGATCAATGGAGAGTTTaGAACTACCTCTCCAACCCA +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRDQWRV*NYLSNP
Trigger: TGGGTTGGAGAGGTAGTTCCAAACTCTCCATTGATC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATGAGGAAGGGGAGAGTTaGAGACAGTGTCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHEEGES*RQCQPL
Trigger: CAATGGCTGACACTGTCTCCAACTCTCCCCTTCCTC...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCAGTGTGCAACTGGGTaGCTAAAGACCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRQCATG*LKTKEK
Trigger: TTTTTCTTTGGTCTTTAGTCACCCAGTTGCACACTG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGAGGTTTGGGATCAGTaGCAACCATCCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQEVWDQ*QPSWPG
Trigger: CCCAGGCCAGGATGGTTGGCACTGATCCCAAACCTC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAAAGAATGGAATTTAGCTaGTACGGAATCAGAATCCAC +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKRMEFS*YGIRIH
Trigger: GTGGATTCTGATTCCGTAGCAGCTAAATTCCATTCT...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACATTTGTGGGCAATGCTaGCACTTGGTGGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINICGQC*HLVARR
Trigger: TCTCCTGGCCACCAAGTGCCAGCATTGCCCACAAAT...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAACAGTGCCAACCATCCTaGCCTGGGAAAGTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQQCQPS*PGKVGC
Trigger: GCACCCTACTTTCCCAGGCCAGGATGGTTGGCACTG...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCTATCTCCATTTCTATaGAAGCTGCTTCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRLSPFL*KLLHLV
Trigger: TACCAGATGAAGCAGCTTTCATAGAAATGGAGATAG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAATCGCCTTCAAATAGATaGAAAGTTCTGGTTTACACT +
Preference number: 4 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKSPSNR*KVLVYT
Trigger: AGTGTAAACCAGAACTTTTCATCTATTTGAAGGCGA...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATCTCTTCGGGAGTGCTaGTGTCCTCCGGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQSLREC*CPPASH
Trigger: ATGAGATGCCGGAGGACAGCAGCACTCCCGAAGAGA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACAAAGGTGTTCCTGCCTaGGAGTTTCTCCCATTTCCG +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINKGVPA*EFLPFP
Trigger: CGGAAATGGGAGAAACTCCCAGGCAGGAACACCTTT...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAACCAGTTAGGATCCCCTaGCCAGAGGTCTCTGTGACT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQPVRIP*PEVSVT
Trigger: AGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGG...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACGAGTACTTATTAAAATaGGGTTCATATGAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHEYLLK*GSYECQ
Trigger: TTGGCACTCATATGAACCCCATTTTAATAAGTACTC...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACTTATCTGGAAATTCTTaGTACGAGGCGGTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINLSGNS*YEAVVA
Trigger: AGCGACCACCGCCTCGTATCAAGAATTTCCAGATAA...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGCCACGAGGAAAGTATaGAATCCAGTCAGTCCCACG +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQATRKV*NPVSPT
Trigger: CGTGGGACTGACTGGATTTCATACTTTCCTCGTGGC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCACACTATATCTCCTTaGAAGTCCTTTCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRHTISP*KSFLHS
Trigger: ACTATGAAGAAAGGACTTTCAAGGAGATATAGTGTG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATCTGGACTCAGCACGTaGAGCAGCTTGGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQSGLST*SSLGGF
Trigger: AAATCCTCCCAAGCTGCTGCACGTGCTGAGTCCAGA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACTTCCCCTGGGAACATTaGTTCTTTAATCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINFPWEH*FFNLPS
Trigger: AGAGGGGAGATTAAAGAATCAATGTTCCCAGGGGAA...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR GCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATCTGTGGCAAGAGGCTaGTACTGGTCTCTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQSVARG*YWSLEY
Trigger: GTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACTGCTATTCCTGCCGCTaGGTCAAACATCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINCYSCR*VKHHQK
Trigger: CTTTTGATGATGTTTGACCCAGCGGCAGGAATAGCA...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAAATGCTGGCACTTGGTaGCCAGGAGAATCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQNAGTW*PGESSD
Trigger: GTCAGAAGATTCTCCTGGCCACCAAGTGCCAGCATT...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATGAAGGGCTATGCCGCTaGCATCTCATAAATTCTTAT +
Preference number: 4 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHEGLCR*HLINSY
Trigger: ATAAGAATTTATGAGATGCCAGCGGCATAGCCCTTC...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATTATCTGGAAATTCTTaGTACGAGGCGGTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQLSGNS*YEAVVA
Trigger: AGCGACCACCGCCTCGTATCAAGAATTTCCAGATAA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAACATTGGTTGTCTGGTTaGGAGCCACGAGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQHWLSG*EPRGKY
Trigger: ATACTTTCCTCGTGGCTCTCAACCAGACAACCAATG...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAAGAGCTGAATGGACATaGAGAAATGGCTCACCACAG +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQRAEWT*RNGSPQ
Trigger: CTGTGGTGAGCCATTTCTTCATGTCCATTCAGCTCT...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATCCACTTTCCTCCAGTaGCAAAATACCCCTTCGATC +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQSTFLQ*QNTPSI
Trigger: GATCGAAGGGGTATTTTGCCACTGGAGGAAAGTGGA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAACTAATGGGAAAAGAGTaGGGCTTAGGTGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQLMGKE*GLGVRV
Trigger: CACTCTGACACCTAAGCCCCACTCTTTTCCCATTAG...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR TCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACCTATCTCCATTTCTATaGAAGCTGCTTCATCTGGTA +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINLSPFL*KLLHLV
Trigger: TACCAGATGAAGCAGCTTTCATAGAAATGGAGATAG...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAACACTCAGGCTTCCTCTaGGGAAAAGAAATGACCAAA +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQHSGFL*GKEMTK
Trigger: TTTGGTCATTTCTTTTCCTCAGAGGAAGCCTGAGTG...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAATGCCAGTGTGCAACTaGGTGACTAAAGACCAAAGA +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQMPVCN*VTKDQR
Trigger: TCTTTGGTCTTTAGTCACCCAGTTGCACACTGGCAT...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CCA 90 bp GGAAGACATGGAAAAAGGTCTGGGAGCAGCCAAATTTCATTAATTCCAATTAACTGTAGTATAGATCAATaGAGAGTTTGGAACTACCTC +
Preference number: 4 (lower is better)
Translates to: GRHGKRSGSSQISLIPINCSIDQ*RVWNYL
Trigger: GAGGTAGTTCCAAACTCTCCATTGATCTATACTACA...GTTAATTGGAATTAATGAAATTTGGCTGCTCCCAGACCTTTTTCCATGTCTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR TCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAATTCTTCCCTGTCCATaGTCCTTTGATGTCTTCATT +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQILPCP*SFDVFI
Trigger: AATGAAGACATCAAAGGATCATGGACAGGGAAGAAT...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR GCA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGACATCTTCTGCCACTaGCTTGAGTTCAGAAATTTA +
Preference number: 4 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQDIFCH*LEFRNL
Trigger: TAAATTTCTGAACTCAAGGCAGTGGCAGAAGATGTC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS TCA 90 bp AGGGGGAGCCGGCCTGAACCACGGAGACCCAACTCGGCCGGCAGCTaGCGGCAGGAAACGGACCGTCCCAGGGAATCACGTCGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RGSRPEPRRPNSAGS*RQETDRPRESRRQP
Trigger: TGGCTGCCGACGTGATTCCCTGGGACGGTCCGTTTCCTGCCGTCAGCTGCCGGCCGAGTTGGGTCTCCGTGGTTCAGGCCGGCTCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS CCA 90 bp GGCAGGAAACGGACCGTCCCAGGGAATCACGTCGGCAGCCAAAGGTaGCAGCGACTTGTCCTCCCCGGGCCGGGAGGCTGTCTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GRKRTVPGNHVGSQR*QRLVLPGPGGCLLL
Trigger: CAGGAGGAGACAGCCTCCCGGCCCGGGGAGGACAAGTCGCTGCCACCTTTGGCTGCCGACGTGATTCCCTGGGACGGTCCGTTTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000406492.2
CDS-3UTR CAA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAAAGGTGGCAGCGACTaGTCCTCCCCGGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAKGGSD*SSPGRE
Trigger: CTCCCGGCCCGGGGAGGACAAGTCGCTGCCACCTTT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS TCA 90 bp ATGATTGGAATTCCTGAACCACGGAGACCCAACTCGGCCGGCAGCTaGCGGCAGGAAACGGACCGTCCCAGGGAATCACGTCGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: MIGIPEPRRPNSAGS*RQETDRPRESRRQP
Trigger: TGGCTGCCGACGTGATTCCCTGGGACGGTCCGTTTCCTGCCGTCAGCTGCCGGCCGAGTTGGGTCTCCGTGGTTCAGGAATTCCAATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406492.2
CDS-3UTR CAA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGCTGCTACTGGTCTCTaGAGTACTGGGAGGTCGACT +
Preference number: 5 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWAATGL*STGRST
Trigger: AGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGC...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAAGCACGTGCAGCAGCTaGGGAGGATTTGAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRESTCSS*GGFEPV
Trigger: GACTGGCTCAAATCCTCCCAAGCTGCTGCACGTGCT...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGAGGCTGAGCCCAGCTTaGAAATCACGTTGCCTGCTA +
Preference number: 5 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWRLSPA*KSRCLL
Trigger: TAGCAGGCAACGTGATTTCAAAGCTGGGCTCAGCCT...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGCTGCTACTGGTCTCTaGAGTACTGGGAGGTCGACT +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREAATGL*STGRST
Trigger: AGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAAGCCTTGGTTTCCCATTaGTGCATTCAGGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREALVSH*CIQGLC
Trigger: GCAGAGGCCCTGAATGCACAAATGGGAAACCAAGGC...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp CCCAAGGGTGCCCTGGTTAATGGAAGTTTGGGGAGTAACAAGCAACCCCTTCCACTGGAAGAGCGGGGCTaGGAGGAAGCCCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PKGALVNGSLGSNKQPLPLEERG*EEAPSV
Trigger: CACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCCAG...TGGAAGGGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAGGGCACCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS CCA 90 bp TCAGGTGTTCTGTGGGGGCTGGGCTCTGTGGCAAGAGGCTGCTACTaGTCTCTTGAGTACTGGGAGGTCGACTTCCACTTTCCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SGVLWGLGSVARGCY*SLEYWEVDFHFPPV
Trigger: CACTGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGAGCCCAGCCCCCACAGAACACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CCA 90 bp TCTTCCATAGATAGGCTACTTCTCAGCTTCAGCTGCCTCCTGTGGTaGCTCTGGGGGCTCTGGAGGTGGCATCTCTTCGGGAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSIDRLLLSFSCLLW*LWGLWRWHLFGSAA
Trigger: AGCAGCACTCCCGAAGAGATGCCACCTCCAGAGCCCCCAGAGCCACCACAGGAGGCAGCTGAAGCTGAGAAGTAGCCTATCTATGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CCA 90 bp GTCTCTTCCATAGATAGGCTACTTCTCAGCTTCAGCTGCCTCCTGTaGTGGCTCTGGGGGCTCTGGAGGTGGCATCTCTTCGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: VSSIDRLLLSFSCLL*WLWGLWRWHLFGSA
Trigger: AGCACTCCCGAAGAGATGCCACCTCCAGAGCCCCCAGAGCCACCACAGGAGGCAGCTGAAGCTGAGAAGTAGCCTATCTATGGAAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAACCTCCGGCATCTCATTaGAGTTCAGGTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREPPASH*SSGVLW
Trigger: CCACAGAACACCTGAACTCAAATGAGATGCCGGAGG...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp GGAAGAGCGGGGCTTGGAGGAAGCCCCCAGTGTGGTTACCATAGCCAGAGGTGGGAGCCTCTCTGTGCCTaGGTTTCCCATTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: GRAGLGGSPQCGYHSQRWEPLCA*VSHLCI
Trigger: AATGCACAAATGGGAAACCAAGGCACAGAGAGGCTC...CCACCTCTGGCTATGGTAACCACACTGGGGGCTTCCTCCAAGCCCCGCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS CCA 90 bp GGGCTGGGCTCTGTGGCAAGAGGCTGCTACTGGTCTCTTGAGTACTaGGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAATACCCCTTC +
Preference number: 5 (lower is better)
Translates to: GLGSVARGCYWSLEY*EVDFHFPPVAKYPF
Trigger: GAAGGGGTATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGAGCCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGCCTGCCCCCAGAGGTTaGGGATCAGTGCCAACCATC +
Preference number: 5 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKPAPRG*GSVPTI
Trigger: GATGGTTGGCACTGATCCCAAACCTCTGGGGGCAGG...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS TCA 90 bp TCTGTGGGGGCTGGGCTCTGTGGCAAGAGGCTGCTACTGGTCTCTTaGGTACTGGGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAATA +
Preference number: 5 (lower is better)
Translates to: SVGAGLCGKRLLLVS*VLGGRLPLSSSGKI
Trigger: TATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGAGCCCAGCCCCCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CCA 90 bp CCGGGCCATCATGACGCGGCCATCACAGCAAAAGGTGTTCCTGCCTaGGAGTTTCTCCCATTTCCGTGTCACCTTCTTTCTCACCACCAT +
Preference number: 5 (lower is better)
Translates to: PGHHDAAITAKGVPA*EFLPFPCHLLSHHH
Trigger: ATGGTGGTGAGAAAGAAGGTGACACGGAAATGGGAGAAACTCCCAGGCAGGAACACCTTTTGCTGTGATGGCCGCGTCATGATGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357166.11
ENST00000371064.7
ENST00000406492.2
CDS-3UTR CAA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAGCTTTGAAATCACGTaGCCTGCTATTCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTASFEIT*PAIPAA
Trigger: AGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGCT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAATTTATCTGGAAATTCTaGATACGAGGCGGTGGTCGC +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREFIWKF*IRGGGR
Trigger: GCGACCACCGCCTCGTATCAAGAATTTCCAGATAAA...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAACCTTTGATGTCTTCATaGGTTGTCTGGTTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREPLMSS*VVWLRA
Trigger: GGCTCTCAACCAGACAACCAATGAAGACATCAAAGG...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGAGCACGTGCAGCAGCTaGGGAGGATTTGAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKSTCSS*GGFEPV
Trigger: GACTGGCTCAAATCCTCCCAAGCTGCTGCACGTGCT...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAACCTGTCCATGATCCTTaGATGTCTTCATTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWREPVHDP*MSSLVV
Trigger: GACAACCAATGAAGACATCAAAGGATCATGGACAGG...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp AGCCCCAGAATGAGACCAGTGACCCCAAGCAGGAGGGCTGGGATCTGGAGGGAATCATCAAAAGTCCAATaGCTAGCCCTGGAAGACAAT +
Preference number: 5 (lower is better)
Translates to: SPRMRPVTPSRRAGIWRESSKVQ*LALEDN
Trigger: ATTGTCTTCCAGGGCTAGCAATTGGACTTTTGATGA...TTCCCTCCAGATCCCAGCCCTCCTGCTTGGGGTCACTGGTCTCATTCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCCCTGTCCATGATCCTTaGATGTCTTCATTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAPVHDP*MSSLVV
Trigger: GACAACCAATGAAGACATCAAAGGATCATGGACAGG...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp GAAGACCCCAAGAACCCAGTTAGGATCCCCTGGCCAGAGGTCTCTGTGACTGCCAAAGGGACAGCTTACTaGCTCTCTGTCTCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: EDPKNPVRIPWPEVSVTAKGTAY*LSVSGL
Trigger: TAAACCTGAGACAGAGAGCAAGTAAGCTGTCCCTTT...GGCAGTCACAGAGACCTCTGGCCAGGGGATCCTAACTGGGTTCTTGGGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGAGCTTTGAAATCACGTaGCCTGCTATTCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKSFEIT*PAIPAA
Trigger: AGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGCT...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS CCA 90 bp ATGCTGCCCTCCAGTGGACTAGGTGTCTCCTCCCACTATGTAAGGTaGGTCCCACATGAAAATCCAGTACAGGAAAATCCACACAGTTGT +
Preference number: 5 (lower is better)
Translates to: MLPSSGLGVSSHYVR*VPHENPVQENPHSC
Trigger: ACAACTGTGTGGATTTTCCTGTACTGGATTTTCATGTGGGACCCACCTTACATAGTGGGAGGAGACACCTAGTCCACTGGAGGGCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491039.1
CDS-3UTR CAA 90 bp GTCCCAGCTGGTGCATGGTATGAATGGGACAGATCTTCAGGCCAACATCTTAAATGGGGCACCGCACCATaGGTAGCTTCTATCTCCATT +
Preference number: 5 (lower is better)
Translates to: VPAGAWYEWDRSSGQHLKWGTAP*VASISI
Trigger: AATGGAGATAGAAGCTACCAATGGTGCGGTGCCCCA...TTTAAGATGTTGGCCTGAAGATCTGTCCCATTCATACCATGCACCAGCTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS TCA 90 bp CAGTGGACTAGGTGTCTCCTCCCACTATGTAAGGTGGGTCCCACATaGAAATCCAGTACAGGAAAATCCACACAGTTGTCACAGATGCTG +
Preference number: 5 (lower is better)
Translates to: QWTRCLLPLCKVGPT*KSSTGKSTQLSQML
Trigger: CAGCATCTGTGACAACTGTGTGGATTTTCCTGTACTGGATTTTCATGTGGGACCCACCTTACATAGTGGGAGGAGACACCTAGTCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491039.1
CDS GCA 90 bp ACACGAGAGAAGAAACAGAGGCTGAGCCCAGCTTTGAAATCACGTTaGCTGCTATTCCTGCCGCTGGGTCAAACATCATCAAAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: TREKKQRLSPALKSR*LLFLPLGQTSSKVQ
Trigger: TTGGACTTTTGATGATGTTTGACCCAGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGCTGGGCTCAGCCTCTGTTTCTTCTCTCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TGCCAACCATCCTGGCCTGGGAAAGTAGGGTGCATAGGAAGCTTGAGGAAGAAGTCATCAAAAGTCCAATaGCTAGCCCTGGAAGACAAT +
Preference number: 5 (lower is better)
Translates to: CQPSWPGKVGCIGSLRKKSSKVQ*LALEDN
Trigger: ATTGTCTTCCAGGGCTAGCAATTGGACTTTTGATGA...CTTCTTCCTCAAGCTTCCTATGCACCCTACTTTCCCAGGCCAGGATGGTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CAA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGAGGCTGAGCCCAGCTTaGAAATCACGTTGCCTGCTA +
Preference number: 5 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRRLSPA*KSRCLL
Trigger: TAGCAGGCAACGTGATTTCAAAGCTGGGCTCAGCCT...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp CAAGTGGAAGGTACCTGTCCCATTCCTAAAAGGATTTGTGGGCAATGCTGGCACAAAGGGACAGCTTACTaGCTCTCTGTCTCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: QVEGTCPIPKRICGQCWHKGTAY*LSVSGL
Trigger: TAAACCTGAGACAGAGAGCAAGTAAGCTGTCCCTTT...GTGCCAGCATTGCCCACAAATCCTTTTAGGAATGGGACAGGTACCTTCCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp GGTGCTTTATGGGTAAAGGCAGGATGGTCAGGACAGGGAGAATGGAATTTAGCTCTGGTTAATGGAAGTTaGGGGAGTAACAAGCAACCC +
Preference number: 5 (lower is better)
Translates to: GALWVKAGWSGQGEWNLALVNGS*GSNKQP
Trigger: GGGTTGCTTGTTACTCCCCAAACTTCCATTAACCAG...AGCTAAATTCCATTCTCCCTGTCCTGACCATCCTGCCTTTACCCATAAAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CAA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGTTTATCTGGAAATTCTaGATACGAGGCGGTGGTCGC +
Preference number: 5 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRFIWKF*IRGGGR
Trigger: GCGACCACCGCCTCGTATCAAGAATTTCCAGATAAA...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGCCTTTGATGTCTTCATaGGTTGTCTGGTTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRPLMSS*VVWLRA
Trigger: GGCTCTCAACCAGACAACCAATGAAGACATCAAAGG...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATGGAGGAAGGGGAGAGTaGGAGACAGTGTCAGCCATT +
Preference number: 5 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHGGRGE*ETVSAI
Trigger: AATGGCTGACACTGTCTCCAACTCTCCCCTTCCTCC...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS TCA 90 bp TCTCCCATTTCCGTGTCACCTTCTTTCTCACCACCATCACAGACATaGTTGGAATTCCTGCTCCAAAATGGGTTTTGCGATTACACGAGA +
Preference number: 5 (lower is better)
Translates to: SPISVSPSFSPPSQT*LEFLLQNGFCDYTR
Trigger: TCTCGTGTAATCGCAAAACCCATTTTGGAGCAGGAATTCCAATCATGTCTGTGATGGTGGTGAGAAAGAAGGTGACACGGAAATGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGGCTCCAAAATGGGTTTaGCGATTACACGAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRAPKWV*RLHERR
Trigger: TCTTCTCTCGTGTAATCGCAAAACCCATTTTGGAGC...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp AACCCCCAACACATACACATTTGTAGGCTCACACAAAAGTGCAGAGATTTACATCCTCCGGCATCTCATTaGAGTTCAGGTGTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: NPQHIHICRLTQKCRDLHPPASH*SSGVLW
Trigger: CCACAGAACACCTGAACTCAAATGAGATGCCGGAGG...ATGTAAATCTCTGCACTTTTGTGTGAGCCTACAAATGTGTATGTGTTGGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS GCA 90 bp TGTCACCTTCTTTCTCACCACCATCACAGACATGATTGGAATTCCTaGTCCAAAATGGGTTTTGCGATTACACGAGAGAAGAAACAGAGG +
Preference number: 5 (lower is better)
Translates to: CHLLSHHHHRHDWNS*SKMGFAITREKKQR
Trigger: CCTCTGTTTCTTCTCTCGTGTAATCGCAAAACCCATTTTGGAGCAGGAATTCCAATCATGTCTGTGATGGTGGTGAGAAAGAAGGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGCCTTGGTTTCCCATTaGTGCATTCAGGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQALVSH*CIQGLC
Trigger: GCAGAGGCCCTGAATGCACAAATGGGAAACCAAGGC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAATGGGGCACCGCACCATaGGTAGCTTCTATCTCCATT +
Preference number: 5 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQWGTAP*VASISI
Trigger: AATGGAGATAGAAGCTACCAATGGTGCGGTGCCCCA...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TGCAGACTTTTATTACTGCCATTCCTGCTCCTAATGGGAGCAGGAGTCAAAAGGAGTATGAGATGGGAATaGATAGGGAGTCTTGATTAT +
Preference number: 5 (lower is better)
Translates to: CRLLLLPFLLLMGAGVKRSMRWE*IGSLDY
Trigger: ATAATCAAGACTCCCTATCAATTCCCATCTCATACT...CCTTTTGACTCCTGCTCCCATTAGGAGCAGGAATGGCAGTAATAAAAGTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS-3UTR CAA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGAGCCTCTCTGTGCCTaGGTTTCCCATTTGTGCATT +
Preference number: 5 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQEPLCA*VSHLCI
Trigger: AATGCACAAATGGGAAACCAAGGCACAGAGAGGCTC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS-3UTR CAA 90 bp TCAGGTTTAACTTCTCACCTGAAATCTCTCATAGCCCTAATTAAACACAAACAAGCTCCAAAATGGGTTTaGCGATTACACGAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SGLTSHLKSLIALIKHKQAPKWV*RLHERR
Trigger: TCTTCTCTCGTGTAATCGCAAAACCCATTTTGGAGC...TTGTTTGTGTTTAATTAGGGCTATGAGAGATTTCAGGTGAGAAGTTAAACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS TCA 72 bp CGGCCTGAACCACGGAGACCCAACTCGGCCGGCAGCTaGCGGCAGGAAACGGACCGTCCCAGGGAATCACGT +
Preference number: 6 (lower is better)
Translates to: RPEPRRPNSAGS*RQETDRPRESR
Trigger: ACGTGATTCCCTGGGACGGTCCGTTTCCTGCCGTCAGCTGCCGGCCGAGTTGGGTCTCCGTGGTTCAGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357166.11
CDS TCA 72 bp ATTCCTGAACCACGGAGACCCAACTCGGCCGGCAGCTaGCGGCAGGAAACGGACCGTCCCAGGGAATCACGT +
Preference number: 6 (lower is better)
Translates to: IPEPRRPNSAGS*RQETDRPRESR
Trigger: ACGTGATTCCCTGGGACGGTCCGTTTCCTGCCGTCAGCTGCCGGCCGAGTTGGGTCTCCGTGGTTCAGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406492.2
CDS CAA 90 bp GAGGTGGCATCTCTTCGGGAGTGCTGCTGTCCTCCGGCATCTCATTaGAGTTCAGGTGTTCTGTGGGGGCTGGGCTCTGTGGCAAGAGGC +
Preference number: 6 (lower is better)
Translates to: EVASLRECCCPPASH*SSGVLWGLGSVARG
Trigger: GCCTCTTGCCACAGAGCCCAGCCCCCACAGAACACCTGAACTCAAATGAGATGCCGGAGGACAGCAGCACTCCCGAAGAGATGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS GCA 72 bp GCTCTGGGGGCTCTGGAGGTGGCATCTCTTCGGGAGTaGTGCTGTCCTCCGGCATCTCATTTGAGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: ALGALEVASLRE*CCPPASHLSSG
Trigger: ACCTGAACTCAAATGAGATGCCGGAGGACAGCAGCACTCCCGAAGAGATGCCACCTCCAGAGCCCCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS GCA 72 bp CTGGGGGCTCTGGAGGTGGCATCTCTTCGGGAGTGCTaGTGTCCTCCGGCATCTCATTTGAGTTCAGGTGTT +
Preference number: 6 (lower is better)
Translates to: LGALEVASLREC*CPPASHLSSGV
Trigger: AACACCTGAACTCAAATGAGATGCCGGAGGACAGCAGCACTCCCGAAGAGATGCCACCTCCAGAGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CAA 72 bp GGCTGGGCTCTGTGGCAAGAGGCTGCTACTGGTCTCTaGAGTACTGGGAGGTCGACTTCCACTTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GWALWQEAATGL*STGRSTSTFLQ
Trigger: CTGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGAGCCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CAA 72 bp TCTCTTCGGGAGTGCTGCTGTCCTCCGGCATCTCATTaGAGTTCAGGTGTTCTGTGGGGGCTGGGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: SLRECCCPPASH*SSGVLWGLGSV
Trigger: CACAGAGCCCAGCCCCCACAGAACACCTGAACTCAAATGAGATGCCGGAGGACAGCAGCACTCCCGAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS TCA 72 bp GCTGGGCTCTGTGGCAAGAGGCTGCTACTGGTCTCTTaGGTACTGGGAGGTCGACTTCCACTTTCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: AGLCGKRLLLVS*VLGGRLPLSSS
Trigger: ACTGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGAGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CAA 90 bp TTCTGTGGGGGCTGGGCTCTGTGGCAAGAGGCTGCTACTGGTCTCTaGAGTACTGGGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: FCGGWALWQEAATGL*STGRSTSTFLQWQN
Trigger: ATTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGAGCCCAGCCCCCACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CCA 72 bp TCTGTGGCAAGAGGCTGCTACTGGTCTCTTGAGTACTaGGAGGTCGACTTCCACTTTCCTCCAGTGGCAAAA +
Preference number: 6 (lower is better)
Translates to: SVARGCYWSLEY*EVDFHFPPVAK
Trigger: TTTTGCCACTGGAGGAAAGTGGAAGTCGACCTCCCAGTACTCAAGAGACCAGTAGCAGCCTCTTGCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CCA 72 bp TTAGACAGACCTTCCTTCCTCAATGCTGCCCTCCAGTaGACTAGGTGTCTCCTCCCACTATGTAAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: LDRPSFLNAALQ*TRCLLPLCKVG
Trigger: ACCCACCTTACATAGTGGGAGGAGACACCTAGTCCACTGGAGGGCAGCATTGAGGAAGGAAGGTCTGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491039.1
CDS CAA 72 bp GAAGAAACAGAGGCTGAGCCCAGCTTTGAAATCACGTaGCCTGCTATTCCTGCCGCTGGGTCAAACATCATC +
Preference number: 6 (lower is better)
Translates to: EETEAEPSFEIT*PAIPAAGSNII
Trigger: GATGATGTTTGACCCAGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGCTGGGCTCAGCCTCTGTTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CAA 72 bp ATTACACGAGAGAAGAAACAGAGGCTGAGCCCAGCTTaGAAATCACGTTGCCTGCTATTCCTGCCGCTGGGT +
Preference number: 6 (lower is better)
Translates to: ITREKKQRLSPA*KSRCLLFLPLG
Trigger: ACCCAGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGCTGGGCTCAGCCTCTGTTTCTTCTCTCGTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CAA 72 bp TTCAGTTTCACAATCTGGTTGTTTATCTGGAAATTCTaGATACGAGGCGGTGGTCGCTGGCCCTGGGGCACC +
Preference number: 6 (lower is better)
Translates to: FSFTIWLFIWKF*IRGGGRWPWGT
Trigger: GGTGCCCCAGGGCCAGCGACCACCGCCTCGTATCAAGAATTTCCAGATAAACAACCAGATTGTGAAACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357166.11
ENST00000371064.7
ENST00000406492.2
ENST00000433917.5
CDS CAA 90 bp GGTTTTGCGATTACACGAGAGAAGAAACAGAGGCTGAGCCCAGCTTaGAAATCACGTTGCCTGCTATTCCTGCCGCTGGGTCAAACATCA +
Preference number: 6 (lower is better)
Translates to: GFAITREKKQRLSPA*KSRCLLFLPLGQTS
Trigger: TGATGTTTGACCCAGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGCTGGGCTCAGCCTCTGTTTCTTCTCTCGTGTAATCGCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CAA 90 bp TACACGAGAGAAGAAACAGAGGCTGAGCCCAGCTTTGAAATCACGTaGCCTGCTATTCCTGCCGCTGGGTCAAACATCATCAAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: YTREETEAEPSFEIT*PAIPAAGSNIIKSP
Trigger: TGGACTTTTGATGATGTTTGACCCAGCGGCAGGAATAGCAGGCAACGTGATTTCAAAGCTGGGCTCAGCCTCTGTTTCTTCTCTCGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS TCA 72 bp GCTGTAGGGATTCTGGACGCGATTCTTCCCTGTCCATaGTCCTTTGATGTCTTCATTGGTTGTCTGGTTGAG +
Preference number: 6 (lower is better)
Translates to: AVGILDAILPCP*SFDVFIGCLVE
Trigger: CTCAACCAGACAACCAATGAAGACATCAAAGGATCATGGACAGGGAAGAATCGCGTCCAGAATCCCTACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357166.11
ENST00000371064.7
ENST00000433917.5
CDS TCA 72 bp AGGTGTCTCCTCCCACTATGTAAGGTGGGTCCCACATaGAAATCCAGTACAGGAAAATCCACACAGTTGTCA +
Preference number: 6 (lower is better)
Translates to: RCLLPLCKVGPT*KSSTGKSTQLS
Trigger: TGACAACTGTGTGGATTTTCCTGTACTGGATTTTCATGTGGGACCCACCTTACATAGTGGGAGGAGACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491039.1
CDS CAA 90 bp TGTAGTAGAAACTCAATAAATGCTAGCAACTTTCCTCTTCTTGGGTaGCGTCTTAGACAGACCTTCCTTCCTCAATGCTGCCCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: CSRNSINASNFPLLG*RLRQTFLPQCCPPV
Trigger: CACTGGAGGGCAGCATTGAGGAAGGAAGGTCTGTCTAAGACGCAACCCAAGAAGAGGAAAGTTGCTAGCATTTATTGAGTTTCTACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491039.1
CDS TCA 72 bp TCCGTGTCACCTTCTTTCTCACCACCATCACAGACATaGTTGGAATTCCTGCTCCAAAATGGGTTTTGCGAT +
Preference number: 6 (lower is better)
Translates to: SVSPSFSPPSQT*LEFLLQNGFCD
Trigger: ATCGCAAAACCCATTTTGGAGCAGGAATTCCAATCATGTCTGTGATGGTGGTGAGAAAGAAGGTGACACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS GCA 72 bp CTTTCTCACCACCATCACAGACATGATTGGAATTCCTaGTCCAAAATGGGTTTTGCGATTACACGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: LSHHHHRHDWNS*SKMGFAITREK
Trigger: CTTCTCTCGTGTAATCGCAAAACCCATTTTGGAGCAGGAATTCCAATCATGTCTGTGATGGTGGTGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357166.11
ENST00000371064.7
CDS CAA 72 bp AACTCAATAAATGCTAGCAACTTTCCTCTTCTTGGGTaGCGTCTTAGACAGACCTTCCTTCCTCAATGCTGC +
Preference number: 6 (lower is better)
Translates to: NSINASNFPLLG*RLRQTFLPQCC
Trigger: GCAGCATTGAGGAAGGAAGGTCTGTCTAAGACGCAACCCAAGAAGAGGAAAGTTGCTAGCATTTATTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491039.1