RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163812

Ensembl transcript IDs: ENST00000296127.7, ENST00000339420.7, ENST00000342790.8, ENST00000419642.1, ENST00000424952.7, ENST00000443879.2, ENST00000455235.5, ENST00000466084.1, ENST00000478669.1, ENST00000479314.1

Found 798 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCAGGTCACCCCCGGGAGGTCCCTCAGAGGACTGCTGGGGTGTaGGTGGACAGCAGCGTGGAGGAACACAGCAAGCAGGGCCCGCCT +
Preference number: 1 (lower is better)
Translates to: GPGHPREVPQRTAGV*VDSSVEEHSKQGPP
Trigger: AGGCGGGCCCTGCTTGCTGTGTTCCTCCACGCTGCTGTCCACCCACACCCCAGCAGTCCTCTGAGGGACCTCCCGGGGGTGACCTGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp CAGGTCACCCCCGGGAGGTCCCTCAGAGGACTGCTGGGGTGTGGGTaGACAGCAGCGTGGAGGAACACAGCAAGCAGGGCCCGCCTGGTG +
Preference number: 1 (lower is better)
Translates to: QVTPGRSLRGLLGCG*TAAWRNTASRARLV
Trigger: CACCAGGCGGGCCCTGCTTGCTGTGTTCCTCCACGCTGCTGTCCACCCACACCCCAGCAGTCCTCTGAGGGACCTCCCGGGGGTGACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp GTGGGTGGACAGCAGCGTGGAGGAACACAGCAAGCAGGGCCCGCCTaGTGGACTGACGTGTTCTCCACCCACCACCCAGCCCTCCCCTTC +
Preference number: 1 (lower is better)
Translates to: VGGQQRGGTQQAGPA*WTDVFSTHHPALPF
Trigger: GAAGGGGAGGGCTGGGTGGTGGGTGGAGAACACGTCAGTCCACCAGGCGGGCCCTGCTTGCTGTGTTCCTCCACGCTGCTGTCCACCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp GCAACTCAGCCACCAGGCCACAGAAAGGGTGTTGGGGTGGGGAGATaGCCAGAGGAGGTAAAGACATGGCCAGGCCAGCTCTCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: ATQPPGHRKGVGVGR*PEEVKTWPGQLSRP
Trigger: GGGCCTGGAGAGCTGGCCTGGCCATGTCTTTACCTCCTCTGGGCATCTCCCCACCCCAACACCCTTTCTGTGGCCTGGTGGCTGAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTaGAACTCAGCCACCAGGCCACAGAAAGGGTGTTGGGGTGGGGAG +
Preference number: 1 (lower is better)
Translates to: AASSKLSTHLPLGVG*NSATRPQKGCWGGE
Trigger: CTCCCCACCCCAACACCCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp GGAGGTAAGGCTGGGCTCAGGCCTGCTCATGCAGCAGATCCACCCTaGAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGG +
Preference number: 1 (lower is better)
Translates to: GGKAGLRPAHAADPP*SLFQAVNSPASGCR
Trigger: CCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGCAGGGTGGATCTGCTGCATGAGCAGGCCTGAGCCCAGCCTTACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp GAGGTAAAGACATGGCCAGGCCAGCTCTCCAGGCCCACAACACCCTaGACAGAGGCCTTTGACCCTCCACTGGGGGCACTGCTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: EVKTWPGQLSRPTTP*TEAFDPPLGALLSP
Trigger: TGGAGAAAGCAGTGCCCCCAGTGGAGGGTCAAAGGCCTCTGTGCAGGGTGTTGTGGGCCTGGAGAGCTGGCCTGGCCATGTCTTTACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp GCAGGCAGCATGGGGAAGCCCTTTCCAGGGAGTAGCTGGCAGCTCTaGAGTCTTTCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACC +
Preference number: 1 (lower is better)
Translates to: AGSMGKPFPGSSWQL*SLSRLVSPDVSVPT
Trigger: GGTTGGGACACTGACATCAGGGGAGACTAGCCTGGAAAGACTGCAGAGCTGCCAGCTACTCCCTGGAAAGGGCTTCCCCATGCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 90 bp GCATGCGAGGTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATaGATTAGGCAGCCGGAGGGCACACAGGACCACTGTGGGGAGGTA +
Preference number: 1 (lower is better)
Translates to: ACEVKKRVLVQQVPT*IRQPEGTQDHCGEV
Trigger: TACCTCCCCACAGTGGTCCTGTGTGCCCTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCACCTCGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp ATGTGCTCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTaGAGGGAGAAGGGGATGAAGAACATCGTCAGCGTGGTGCTGGGC +
Preference number: 1 (lower is better)
Translates to: MCSLGWFFRLRRSMP*REKGMKNIVSVVLG
Trigger: GCCCAGCACCACGCTGACGATGTTCTTCATCCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp AAGGTCTCCTTTACTGACTGCCAGCTCCCCATGTGCTCCCTGGGCTaGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGG +
Preference number: 1 (lower is better)
Translates to: KVSFTDCQLPMCSLG*FFRLRRSMPCREKG
Trigger: CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp AAGTCCCCACCAAAGGTCTCCTTTACTGACTGCCAGCTCCCCATGTaGTCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGC +
Preference number: 1 (lower is better)
Translates to: KSPPKVSFTDCQLPM*SLGWFFRLRRSMPC
Trigger: GCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTTTGGTGGGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp CTGCTGAGTGCCTGTGCTCCTGCCAATCCTGACGCCAGTAGACGCTaGGGAAATGGGCCAAAGAGAGGAACAAAGGCACGTGGAGGGAGT +
Preference number: 1 (lower is better)
Translates to: LLSACAPANPDASRR*GNGPKRGTKARGGS
Trigger: ACTCCCTCCACGTGCCTTTGTTCCTCTCTTTGGCCCATTTCCCCAGCGTCTACTGGCGTCAGGATTGGCAGGAGCACAGGCACTCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 90 bp ACGGGCTGCTGGGCCCCGCTCGGTTTCTGGTTCGGTAGCCTGGGGTaGGGACCGAGAATGTGCATTTCTAACAAGTTCTCAGGTGATGCT +
Preference number: 1 (lower is better)
Translates to: TGCWAPLGFWFGSLG*GPRMCISNKFSGDA
Trigger: AGCATCACCTGAGAACTTGTTAGAAATGCACATTCTCGGTCCCCACCCCAGGCTACCGAACCAGAAACCGAGCGGGGCCCAGCAGCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp AAGACACGGGCTGCTGGGCCCCGCTCGGTTTCTGGTTCGGTAGCCTaGGGTGGGGACCGAGAATGTGCATTTCTAACAAGTTCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: KTRAAGPRSVSGSVA*GGDRECAFLTSSQV
Trigger: CACCTGAGAACTTGTTAGAAATGCACATTCTCGGTCCCCACCCCAGGCTACCGAACCAGAAACCGAGCGGGGCCCAGCAGCCCGTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 90 bp CAATTGCTTTGCGAGTTAGCAGGCAAACCGTGTCCACTTGGGGGATaGGGTCGCTGTGCCAAGGTCCCTTCTGATCCTGCCCTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: QLLCELAGKPCPLGG*GRCAKVPSDPALLR
Trigger: CCTGAGAAGGGCAGGATCAGAAGGGACCTTGGCACAGCGACCTCATCCCCCAAGTGGACACGGTTTGCCTGCTAACTCGCAAAGCAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
3UTR TCA 90 bp CTAAGGCTCCCGAGGAAGGAAGAGTCTGTGCAGAACAGACTCAGCTaGGCCCCACAGAACGAGAACAGGCTGTTCCCTGCTCCCTGTATC +
Preference number: 1 (lower is better)
Translates to: LRLPRKEESVQNRLS*APQNENRLFPAPCI
Trigger: GATACAGGGAGCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACAGACTCTTCCTTCCTCGGGAGCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 90 bp GATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTaGCACGGTCTGGAGAAGGGGTTGAACCAGTTCAGGGAGAAGTCC +
Preference number: 1 (lower is better)
Translates to: DVTCRTMSLSLGISG*HGLEKGLNQFREKS
Trigger: GGACTTCTCCCTGAACTGGTTCAACCCCTTCTCCAGACCGTGTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp CGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCAGGCTaGTACAATGCCCCTGGCTCTAGACTACTCACCGGCCGCCGCTCC +
Preference number: 1 (lower is better)
Translates to: RRKQRSRRVQVMYPG*YNAPGSRLLTGRRS
Trigger: GGAGCGGCGGCCGGTGAGTAGTCTAGAGCCAGGGGCATTGTAGCAGCCTGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp CCACAACACCCTGCACAGAGGCCTTTGACCCTCCACTGGGGGCACTaGTTTCTCCATCTCTTCTGGAAGCCAAGGGAATTTGCTGTGGGT +
Preference number: 1 (lower is better)
Translates to: PQHPAQRPLTLHWGH*FLHLFWKPREFAVG
Trigger: ACCCACAGCAAATTCCCTTGGCTTCCAGAAGAGATGGAGAAAGCAGTGCCCCCAGTGGAGGGTCAAAGGCCTCTGTGCAGGGTGTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp AGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTGGAGAGCTCTaGCAAGGGTTAGGGCAGAGGTGGCTTTGTGAACACTGGGCCCTT +
Preference number: 1 (lower is better)
Translates to: RIPPSPLSWVIVGEL*QGLGQRWLCEHWAL
Trigger: AAGGGCCCAGTGTTCACAAAGCCACCTCTGCCCTAACCCTTGCCAGAGCTCTCCAACTATGACCCACGAGAGGGGTGATGGTGGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 90 bp CAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTaGCTGACACGGTCTGGAGAAGGGGTTGAACCAGTTCAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: QRCHLPHHVFVTGDL*LTRSGEGVEPVQGE
Trigger: TTCTCCCTGAACTGGTTCAACCCCTTCTCCAGACCGTGTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 90 bp CCTGGGATGCCCTGTTCAAAAGCTCCCTTTGCTGGGCGGAGAATGTaGAAGCCACCCAGTCTTGGAGAACGGTTCTTGATGAGCCGTCTC +
Preference number: 1 (lower is better)
Translates to: PGMPCSKAPFAGRRM*KPPSLGERFLMSRL
Trigger: GAGACGGCTCATCAAGAACCGTTCTCCAAGACTGGGTGGCTTTCACATTCTCCGCCCAGCAAAGGGAGCTTTTGAACAGGGCATCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 90 bp AACCAGTTCAGGGAGAAGTCCCCACCAAAGGTCTCCTTTACTGACTaGCAGCTCCCCATGTGCTCCCTGGGCTGGTTCTTTCGTTTGAGG +
Preference number: 1 (lower is better)
Translates to: NQFREKSPPKVSFTD*QLPMCSLGWFFRLR
Trigger: CCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTTTGGTGGGGACTTCTCCCTGAACTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp CTGCTAGCCCCAACTGGATTCTCAAACTTGATAGTCAGAATCACCTaGAGGGCTGTTAAGACACGGGCTGCTGGGCCCCGCTCGGTTTCT +
Preference number: 1 (lower is better)
Translates to: LLAPTGFSNLIVRIT*RAVKTRAAGPRSVS
Trigger: AGAAACCGAGCGGGGCCCAGCAGCCCGTGTCTTAACAGCCCTCCAGGTGATTCTGACTATCAAGTTTGAGAATCCAGTTGGGGCTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 90 bp AGATATGTAGCCACAGGCAGGACAGCTCCCAGCTGTCTCGCTCAGTaGAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGTGCTA +
Preference number: 1 (lower is better)
Translates to: RYVATGRTAPSCLAQ*RLQCLWNGGSFSVL
Trigger: TAGCACCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGCTGGGAGCTGTCCTGCCTGTGGCTACATATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 90 bp CAGACCTTCAGCAGTGGTCACAGACACCACAGGCTTCAAATGGGGTaGATAGAGGGCAGACTCATCCTGGTGGGGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: QTFSSGHRHHRLQMG*IEGRLILVGCVCVC
Trigger: ACACACACACACACACCCCACCAGGATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTGCTGAAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 90 bp GTTGAACCAGTTCAGGGAGAAGTCCCCACCAAAGGTCTCCTTTACTaGCTGCCAGCTCCCCATGTGCTCCCTGGGCTGGTTCTTTCGTTT +
Preference number: 1 (lower is better)
Translates to: VEPVQGEVPTKGLLY*LPAPHVLPGLVLSF
Trigger: AAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTTTGGTGGGGACTTCTCCCTGAACTGGTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp AGAAGGACGATGGGGTTAAGGAAGGAGTGCAGGACACAAACAGCATaGGAGGTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGC +
Preference number: 1 (lower is better)
Translates to: RRTMGLRKECRTQTA*EVKKRVLVQQVPTC
Trigger: GCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCACCTCGCATGCTGTTTGTGTCCTGCACTCCTTCCTTAACCCCATCGTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp AGCTCCCAGCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATaGGGGCTCATTTTCGGTGCTACTGTCTTAACTCTGGCTCTGTCC +
Preference number: 1 (lower is better)
Translates to: SSQLSRSVKTPVSVE*GLIFGATVLTLALS
Trigger: GGACAGAGCCAGAGTTAAGACAGTAGCACCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGCTGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 90 bp ATGGATCTTGTTGACACAAGTCTAAAGGGACCTTCATGTGGGTCATaGGCATGTGATGCCATGCTGCTTCCTGACTGGCCCCTCGCCAGG +
Preference number: 1 (lower is better)
Translates to: MDLVDTSLKGPSCGS*ACDAMLLPDWPLAR
Trigger: CCTGGCGAGGGGCCAGTCAGGAAGCAGCATGGCATCACATGCTCATGACCCACATGAAGGTCCCTTTAGACTTGTGTCAACAAGATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp CTGCTTCAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTaGTCAGACCTTCAGCAGTGGTCACAGACACCACAGGCTTCAAAT +
Preference number: 1 (lower is better)
Translates to: LLQQPLEWGLGAPER*SDLQQWSQTPQASN
Trigger: ATTTGAAGCCTGTGGTGTCTGTGACCACTGCTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 90 bp CTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGTaGTACTGTCTTAACTCTGGCTCTGTCCATGCTGGACATGTCCTG +
Preference number: 1 (lower is better)
Translates to: LSEDSSVCGMGAHFR*YCLNSGSVHAGHVL
Trigger: CAGGACATGTCCAGCATGGACAGAGCCAGAGTTAAGACAGTAGCACCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 90 bp GCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTaGTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAG +
Preference number: 1 (lower is better)
Translates to: ALHRVSKDAVQEPGC*LALFFLTVASFLSQ
Trigger: CTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 90 bp AAAAGCTCCCTTTGCTGGGCGGAGAATGTGAAAGCCACCCAGTCTTaGAGAACGGTTCTTGATGAGCCGTCTCAGTGCAGACTCTTCTTA +
Preference number: 1 (lower is better)
Translates to: KSSLCWAENVKATQS*RTVLDEPSQCRLFL
Trigger: TAAGAAGAGTCTGCACTGAGACGGCTCATCAAGAACCGTTCTCCAAGACTGGGTGGCTTTCACATTCTCCGCCCAGCAAAGGGAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 90 bp AATGGGCCAAAGAGAGGAACAAAGGCACGTGGAGGGAGTGGGTGGTaGATCCACTTCTTATACCAAACGGGGATAAGAACCCTTCTGTTG +
Preference number: 1 (lower is better)
Translates to: NGPKRGTKARGGSGW*IHFLYQTGIRTLLL
Trigger: CAACAGAAGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCACGTGCCTTTGTTCCTCTCTTTGGCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 90 bp GGGTGTGTGATGGGCCTTTTGGCCCAGGTCAGTCTGGGTGACACATaGGCTGTGATCTGTGAACAAACTCACCAACACTCCAAAATGAAT +
Preference number: 1 (lower is better)
Translates to: GCVMGLLAQVSLGDT*AVICEQTHQHSKMN
Trigger: ATTCATTTTGGAGTGTTGGTGAGTTTGTTCACAGATCACAGCTCATGTGTCACCCAGACTGACCTGGGCCAAAAGGCCCATCACACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp GCTTTCTCCATCTCTTCTGGAAGCCAAGGGAATTTGCTGTGGGTTTaGTGGGCTTGGGCACTGCTCCTTCACATGACTCAAGAAAGATCT +
Preference number: 1 (lower is better)
Translates to: AFSISSGSQGNLLWV*WAWALLLHMTQERS
Trigger: AGATCTTTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCAGAAGAGATGGAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp TTCTCCATCTCTTCTGGAAGCCAAGGGAATTTGCTGTGGGTTTGCTaGGCTTGGGCACTGCTCCTTCACATGACTCAAGAAAGATCTCTG +
Preference number: 1 (lower is better)
Translates to: FSISSGSQGNLLWVC*AWALLLHMTQERSL
Trigger: CAGAGATCTTTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCAGAAGAGATGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 90 bp ACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGGTaGGCGTCAACTTCCTGTCCAGATTGCAAGTTAATGGCCTTTACA +
Preference number: 1 (lower is better)
Translates to: TNRGPYSQSSSYPKW*ASTSCPDCKLMAFT
Trigger: TGTAAAGGCCATTAACTTGCAATCTGGACAGGAAGTTGACGCTCACCACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 90 bp ATCTCTTCTGGAAGCCAAGGGAATTTGCTGTGGGTTTGCTGGGCTTaGGCACTGCTCCTTCACATGACTCAAGAAAGATCTCTGTGTATC +
Preference number: 1 (lower is better)
Translates to: ISSGSQGNLLWVCWA*ALLLHMTQERSLCI
Trigger: GATACACAGAGATCTTTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCAGAAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp ATCACAATAATGAAACGTATCAACACCATATGCCTCCTGATACGGTaGAACGAGGACACATTGCTTCAGCAGTGCTCCTGCCCCAAATGC +
Preference number: 1 (lower is better)
Translates to: ITIMKRINTICLLIR*NEDTLLQQCSCPKC
Trigger: GCATTTGGGGCAGGAGCACTGCTGAAGCAATGTGTCCTCGTTGCACCGTATCAGGAGGCATATGGTGTTGATACGTTTCATTATTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp GCATCCACACTGACTTGGACTCAAAGCCATGACCATAGGTTTTTATaGCCTCCTTGTGAGGAGGTGGGTATGAGTATTGATGATTGGCAG +
Preference number: 1 (lower is better)
Translates to: ASTLTWTQSHDHRFL*PPCEEVGMSIDDWQ
Trigger: CTGCCAATCATCAATACTCATACCCACCTCCTCACAAGGAGGCCATAAAAACCTATGGTCATGGCTTTGAGTCCAAGTCAGTGTGGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 90 bp GCCATGACCATAGGTTTTTATGGCCTCCTTGTGAGGAGGTGGGTATaGGTATTGATGATTGGCAGATGGGGAAGAAACAGAAGTTCCAAG +
Preference number: 1 (lower is better)
Translates to: AMTIGFYGLLVRRWV*VLMIGRWGRNRSSK
Trigger: CTTGGAACTTCTGTTTCTTCCCCATCTGCCAATCATCAATACTCATACCCACCTCCTCACAAGGAGGCCATAAAAACCTATGGTCATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp TCAGAGAGAAGGGGAATGAAGCCAAGAGCCCACAGGATGATTATTTaGCATTCATGTGGCATGCTCCCAGATAGGCACTCTTGGATTATA +
Preference number: 1 (lower is better)
Translates to: SERRGMKPRAHRMII*HSCGMLPDRHSWII
Trigger: TATAATCCAAGAGTGCCTATCTGGGAGCATGCCACATGAATGGCAAATAATCATCCTGTGGGCTCTTGGCTTCATTCCCCTTCTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 90 bp ATGATCAAAGTTAACATCACAATAATGAAACGTATCAACACCATATaGCTCCTGATACGGTGCAACGAGGACACATTGCTTCAGCAGTGC +
Preference number: 1 (lower is better)
Translates to: MIKVNITIMKRINTI*LLIRCNEDTLLQQC
Trigger: GCACTGCTGAAGCAATGTGTCCTCGTTGCACCGTATCAGGAGGCATATGGTGTTGATACGTTTCATTATTGTGATGTTAACTTTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 90 bp ATGATTATTTGCCATTCATGTGGCATGCTCCCAGATAGGCACTCTTaGATTATACTCAACCTCCTCACCAACCTCATAAAGTATTCCAGA +
Preference number: 1 (lower is better)
Translates to: MIICHSCGMLPDRHS*IILNLLTNLIKYSR
Trigger: TCTGGAATACTTTATGAGGTTGGTGAGGAGGTTGAGTATAATCCAAGAGTGCCTATCTGGGAGCATGCCACATGAATGGCAAATAATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGTGTCCACTTGGGGGATaGGGTCGCTGTGCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGCPLGG*GRCAKV
Trigger: GACCTTGGCACAGCGACCTCATCCCCCAAGTGGACA...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCCAGCCACAGGCCCCTTaGGGCCAGGACTCATGCCCT +
Preference number: 2 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVQPQAP*GQDSCP
Trigger: AGGGCATGAGTCCTGGCCCCAAGGGGCCTGTGGCTG...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGCAGCCACAGGCCCCTTaGGGCCAGGACTCATGCCCT +
Preference number: 2 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPEQPQAP*GQDSCP
Trigger: AGGGCATGAGTCCTGGCCCCAAGGGGCCTGTGGCTG...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGTGTGGACTTGTGTCTaGGTGGCCATGCCGGTCGGG +
Preference number: 2 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLVWTCV*VAMPVG
Trigger: CCCGACCGGCATGGCCACTCAGACACAAGTCCACAC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGGGAAGCACTGGGGGTaGTGGGAGCGCACCATGCCC +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELGKHWG*WERTMP
Trigger: GGGCATGGTGCGCTCCCAGCACCCCCAGTGCTTCCC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGGACTTGTGTCTGAGTaGCCATGCCGGTCGGGGTCC +
Preference number: 2 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLGLVSE*PCRSGS
Trigger: GGACCCCGACCGGCATGGCCACTCAGACACAAGTCC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCCCCGACCCCCAGACCTaGCCCAACATGGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVPDPQT*PNMERR
Trigger: TCTTCTCTCCATGTTGGGCCAGGTCTGGGGGTCGGG...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCTGGGCGGAGAATGTaGAAGCCACCCAGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSAGRRM*KPPSLG
Trigger: TCCAAGACTGGGTGGCTTTCACATTCTCCGCCCAGC...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGAGGGATGTCCACAGTaGGAAGTGTCCGCGCCCGGC +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELEGCPQ*EVSAPG
Trigger: GCCGGGCGCGGACACTTCTCACTGTGGACATCCCTC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGGGGAAGCACTGGGGGTaGTGGGAGCGCACCATGCCC +
Preference number: 2 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRGKHWG*WERTMP
Trigger: GGGCATGGTGCGCTCCCAGCACCCCCAGTGCTTCCC...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACTGGGGCCAGGACTCATaGCCTTTTGCCTGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADWGQDS*PFAWSW
Trigger: CCAGCTCCAGGCAAAAGGGCATGAGTCCTGGCCCCA...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACGTGTGGACTTGTGTCTaGGTGGCCATGCCGGTCGGG +
Preference number: 2 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNVWTCV*VAMPVG
Trigger: CCCGACCGGCATGGCCACTCAGACACAAGTCCACAC...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCACCTTTCTCAGCATCCTaGGGCTGCACCTCCAAACAC +
Preference number: 2 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSPFSAS*GCTSKH
Trigger: GTGTTTGGAGGTGCAGCCTCAGGATGCTGAGAAAGG...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGTGGCTGCATCCACACTaGCTTGGACTCAAAGCCATG +
Preference number: 2 (lower is better)
Translates to: NSPASGCRLQLSHQATERWLHPH*LGLKAM
Trigger: CATGGCTTTGAGTCCAAGTCAGTGTGGATGCAGCCA...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGCCCCAAGGCAAGCCCTaGCCGGTCCTTCTGTCACAA +
Preference number: 2 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQPQGKP*PVLLSQ
Trigger: TTGTGACAGAAGGACCGGGCAGGGCTTGCCTTGGGG...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCTCCTCAGCACACCCCAACTaGACTATGCTGAGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: AEQTQLSPTEREQAVPCSSAHPN*TMLSPA
Trigger: TGCTGGGCTCAGCATAGTGCAGTTGGGGTGTGCTGA...GGAGCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp TGTGCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCCTTTCCCTTCCGGGCTaGTTCTTCACCCAAAGGGCC +
Preference number: 2 (lower is better)
Translates to: CAEQTQLSPTEREQAVPCLSLPG*FFTQRA
Trigger: GGCCCTTTGGGTGAAGAAGCAGCCCGGAAGGGAAAG...GCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGGTCCCTCAGAGGACTaGTGGGGTGTGGGTGGACAG +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELGPSED*WGVGGQ
Trigger: CTGTCCACCCACACCCCAGCAGTCCTCTGAGGGACC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGAAGCACTGGGGGTGCTaGGAGCGCACCATGCCCATA +
Preference number: 2 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQKHWGC*ERTMPI
Trigger: TATGGGCATGGTGCGCTCCCAGCACCCCCAGTGCTT...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGTCTTTGAACCATGCCTaGCCCTTGCAGGTAGATGTG +
Preference number: 2 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGSLNHA*PLQVDV
Trigger: CACATCTACCTGCAAGGGCCAGGCATGGTTCAAAGA...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGAGGACTGCTGGGGTGTaGGTGGACAGCAGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELRTAGV*VDSSVE
Trigger: CTCCACGCTGCTGTCCACCCACACCCCAGCAGTCCT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGATGCAGGGTCCTCTTTaGACCATGCCTGGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKMQGPL*TMPGPC
Trigger: GCAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCAT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp TGTGCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCAGCTGTCTCGCTCAGTaGAGACTCCAGTGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: CAEQTQLSPTEREQAVPCSCLAQ*RLQCLW
Trigger: CCACAGACACTGGAGTCTTCACTGAGCGAGACAGCT...GCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAGGGGCATGCTCTGCTaGGTGCCTGTGCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRRGMLC*VPVLLP
Trigger: TGGCAGGAGCACAGGCACTCAGCAGAGCATGCCCCT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGGCACAAGAATCACTTaGGCCCAGGAGTTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSGTRIT*AQEFKA
Trigger: AGCCTTGAACTCCTGGGCTCAAGTGATTCTTGTGCC...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGGCACTTTTTAGTGTTTaGTTCTCTCCCCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGALFSV*FSPHSS
Trigger: GCTGCTGTGGGGAGAGAAGCAAACACTAAAAAGTGC...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGGGACGGTAGTGCTGTaGTGTGGACTTGTGTCTGAG +
Preference number: 2 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLGTVVL*CGLVSE
Trigger: CTCAGACACAAGTCCACACCACAGCACTACCGTCCC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGGGGTTAGGGCAGAGGTaGCTTTGTGAACACTGGGCC +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKGLGQR*LCEHWA
Trigger: GGCCCAGTGTTCACAAAGCCACCTCTGCCCTAACCC...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCCTCGTGGGTCATAGTTaGAGAGCTCTGGCAAGGGTT +
Preference number: 2 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVLVGHS*RALARV
Trigger: AACCCTTGCCAGAGCTCTCCAACTATGACCCACGAG...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACCCATCACCCCTCTCGTaGGTCATAGTTGGAGAGCTC +
Preference number: 2 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADPSPLS*VIVGEL
Trigger: GAGCTCTCCAACTATGACCCACGAGAGGGGTGATGG...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTCCCCAAGGCAAGCCCTaGCCGGTCCTTCTGTCACAA +
Preference number: 2 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLPQGKP*PVLLSQ
Trigger: TTGTGACAGAAGGACCGGGCAGGGCTTGCCTTGGGG...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGGAGCACCAGAACGCTaGTCAGACCTTCAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELGAPER*SDLQQW
Trigger: CCACTGCTGAAGGTCTGAGCAGCGTTCTGGTGCTCC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGGTCTTGCAGGGGCATaGTCTGCTGAGTGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSGLAGA*SAECLC
Trigger: GCACAGGCACTCAGCAGAGCATGCCCCTGCAAGACC...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTCCAAGAAAGTGGGCCTaGAGCCTGAGTGTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSPRKWA*SLSVGG
Trigger: GCCTCCCACACTCAGGCTGCAGGCCCACTTTCTTGG...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCACTGGCAGCCCAGAGCTaGTTCTGGGTTAGGACAACA +
Preference number: 2 (lower is better)
Translates to: EAKAGKLLEAGHLRLARALAAQS*FWVRTT
Trigger: TGTTGTCCTAACCCAGAAGCAGCTCTGGGCTGCCAG...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACCGCGGAGGGAACACGTaGCTGTCTCACAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNRGGNT*LSHNQH
Trigger: GTGCTGATTGTGAGACAGGCACGTGTTCCCTCCGCG...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAAAAGCTCCCTTTGCTaGGCGGAGAATGTGAAAGCC +
Preference number: 2 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVKSSLC*AENVKA
Trigger: GGCTTTCACATTCTCCGCCCAGCAAAGGGAGCTTTT...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGATGTTATGCTGTGAATaGTCACCACAGAGAGACCAC +
Preference number: 2 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGMLCCE*SPQRDH
Trigger: GTGGTCTCTCTGTGGTGACCATTCACAGCATAACAT...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGCTTGTCCTCACTCCTTaGATCAGCTTCATCGGCTCC +
Preference number: 2 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPELVLTP*ISFIGS
Trigger: GGAGCCGATGAAGCTGATCCAAGGAGTGAGGACAAG...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGCAAGGGAATTTGCTGTaGGTTTGCTGGGCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPEQGNLL*VCWAWA
Trigger: TGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTG...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 90 bp CCTCCACAGAGTCCTCGTCCTTTGTCTCCTCTGATGGATCCTCCATaGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTT +
Preference number: 2 (lower is better)
Translates to: PPQSPRPLSPLMDPP*FRCLTAMSPAAPCL
Trigger: AAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGGAGGATCCATCAGAGGAGACAAAGGACGAGGACTCTGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCTCCTTCAAACAAGACTaGCACAGGAAGTGCCTCTCA +
Preference number: 2 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVSFKQD*HRKCLS
Trigger: TGAGAGGCACTTCCTGTGTCAGTCTTGTTTGAAGGA...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATCAGGCTAGTCTCCCCTaGTGTCAGTGTCCCAACCCA +
Preference number: 2 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHQASLP*CQCPNP
Trigger: TGGGTTGGGACACTGACATCAGGGGAGACTAGCCTG...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGCAGGCTAGTCTCCCCTaGTGTCAGTGTCCCAACCCA +
Preference number: 2 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRQASLP*CQCPNP
Trigger: TGGGTTGGGACACTGACATCAGGGGAGACTAGCCTG...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGATGATCTCGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELMISIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCGAGATCAT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGCTGGGGATCTCTGGCTaGCACGGTCTGGAGAAGGGG +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLLGISG*HGLEKG
Trigger: CCCCTTCTCCAGACCGTGTCAGCCAGAGATCCCCAG...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGATGAGCCGTCTCAGTaGAGACTCTTCTTAGATGAA +
Preference number: 2 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASDEPSQ*RLFLDE
Trigger: TTCATCTAAGAAGAGTCTGCACTGAGACGGCTCATC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCTCTGGCTCTGTCCATaGTGGACATGTCCTGCACAT +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKLWLCP*WTCPAH
Trigger: ATGTGCAGGACATGTCCAGCATGGACAGAGCCAGAG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp TGTGCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCGGGGCTCATTTTCGGTaGTACTGTCTTAACTCTGGC +
Preference number: 2 (lower is better)
Translates to: CAEQTQLSPTEREQAVPCGAHFR*YCLNSG
Trigger: GCCAGAGTTAAGACAGTAGCACCGAAAATGAGCCCC...GCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTTCTTCTCCTCTGAACTaGAGCCACAGGCCCCTTGGG +
Preference number: 2 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSSSPLN*SHRPLG
Trigger: CCCAAGGGGCCTGTGGCTGCAGTTCAGAGGAGAAGA...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCCTTATTCTAACTGCTaGCCCCTAGGAGACTCCAGG +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKPYSNC*PLGDSR
Trigger: CCTGGAGTCTCCTAGGGGGCAGCAGTTAGAATAAGG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTAAGCACTGGGGGTGCTaGGAGCGCACCATGCCCATA +
Preference number: 2 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVKHWGC*ERTMPI
Trigger: TATGGGCATGGTGCGCTCCCAGCACCCCCAGTGCTT...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAGACCTGGCCCAACATaGAGAGAAGAAGGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRRPGPT*REEGGE
Trigger: TTCCCCTCCTTCTTCTCTCCATGTTGGGCCAGGTCT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCATCAATCAGCAGACCCTaGCCATCACCCATCTTTTCA +
Preference number: 2 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSSISRP*PSPIFS
Trigger: TGAAAAGATGGGTGATGGCCAGGGTCTGCTGATTGA...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 90 bp ACATGTCCTGCACATGTGTGTGTAGAGCTTAATGCAGGGTCCTCTTaGAACCATGCCTGGCCCTTGCAGGTAGATGTGGCAGCCACCTCT +
Preference number: 2 (lower is better)
Translates to: TCPAHVCVELNAGSS*NHAWPLQVDVAATS
Trigger: AGAGGTGGCTGCCACATCTACCTGCAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCATTAAGCTCTACACACACATGTGCAGGACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGTGCCAAGGTCCCTTCTaGTCCTGCCCTTCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLCQGPF*SCPSQA
Trigger: GGCCTGAGAAGGGCAGGATCAGAAGGGACCTTGGCA...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGCCAAAACCCCAGGATaGAGGTTGACAGCACTTTTT +
Preference number: 2 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLAKTPG*RLTALF
Trigger: AAAAAGTGCTGTCAACCTTCATCCTGGGGTTTTGGC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TGTGCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCTTCTTAGATGAACTCTaGGAAAGCCCCCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: CAEQTQLSPTEREQAVPCFLDEL*ESPHPP
Trigger: AGGAGGATGGGGGCTTTCTCAGAGTTCATCTAAGAA...GCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTGCTGGGCGGAGAATGTaGAAGCCACCCAGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPAGRRM*KPPSLG
Trigger: TCCAAGACTGGGTGGCTTTCACATTCTCCGCCCAGC...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAGCTGTCTCGCTCAGTaGAGACTCCAGTGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLSCLAQ*RLQCLW
Trigger: CCACAGACACTGGAGTCTTCACTGAGCGAGACAGCT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACAATGGCCTTTACAGCTaGCTCGGGCTCCTATGTCGT +
Preference number: 2 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNNGLYS*LGLLCR
Trigger: ACGACATAGGAGCCCGAGTCAGCTGTAAAGGCCATT...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGTCTTACCCAAAGTGGTaGGCGTCAACTTCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKSYPKW*ASTSCP
Trigger: TGGACAGGAAGTTGACGCTCACCACTTTGGGTAAGA...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCACTACGGCAATCACACTaGTCAAGTCAGCAAGATGTT +
Preference number: 2 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSLRQSH*SSQQDV
Trigger: AACATCTTGCTGACTTGAGCAGTGTGATTGCCGTAG...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGCAAAGGAAAGAGGCCTaGTGGGGCAAGCTGGTTCAA +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELQRKEA*WGKLVQ
Trigger: TTGAACCAGCTTGCCCCACCAGGCCTCTTTCCTTTG...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAATGGCTCTGTCCATGCTaGACATGTCCTGCACATGTG +
Preference number: 2 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKWLCPC*TCPAHV
Trigger: CACATGTGCAGGACATGTCCAGCATGGACAGAGCCA...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCACCAATTTGGGAGAACTaGCCTTTTCAAACACACAGG +
Preference number: 2 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSPIWEN*PFQTHR
Trigger: CCTGTGTGTTTGAAAAGGCCAGTTCTCCCAAATTGG...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGGCACGTGGAGGGAGTaGGTGGTGAATCCACTTCTT +
Preference number: 2 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSGTWRE*VVNPLL
Trigger: AAGAAGTGGATTCACCACCCACTCCCTCCACGTGCC...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGGCCCAGAGCTGCTTCTaGGTTAGGACAACAAATAGG +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKAQSCF*VRTTNR
Trigger: CCTATTTGTTGTCCTAACCCAGAAGCAGCTCTGGGC...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACGGTCACCAGACTATATaGCCTCAGCTGCAGAAATTC +
Preference number: 2 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADGHQTI*PQLQKF
Trigger: GAATTTCTGCAGCTGAGGCCATATAGTCTGGTGACC...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 90 bp CCTAGTGGGTCATCAGTTGTAGAGAGACGGTCTCTGGCAGGATCGTaGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGAT +
Preference number: 2 (lower is better)
Translates to: PSGSSVVERRSLAGS*PFTECPKMLSKNQD
Trigger: ATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACGATCCTGCCAGAGACCGTCTCTCTACAACTGATGACCCACTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCACAGACTCTTCTTAGATaGACTCTGAGAAAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: EAKAGKLLEAGHLRLARAQTLLR*TLRKPP
Trigger: TGGGGGCTTTCTCAGAGTTCATCTAAGAAGAGTCTG...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGATGCAGGGTCCTCTTTaGACCATGCCTGGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLMQGPL*TMPGPC
Trigger: GCAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCAT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCATCACTACCCTGCAAATaGTGGCTACATTCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: EAKAGKLLEAGHLRLARASLPCK*WLHSSV
Trigger: GACTGAGGAATGTAGCCATCATTTGCAGGGTAGTGA...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACGCCAAAAGTTGGGGCTaGCTTTGTGTAGAAAGATGT +
Preference number: 2 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADAKSWG*LCVERC
Trigger: ACATCTTTCTACACAAAGTCAGCCCCAACTTTTGGC...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGCATGCTCTGCTGAGTaGCTGTGCTCCTGCCAATCC +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLACSAE*LCSCQS
Trigger: GGATTGGCAGGAGCACAGGCACTCAGCAGAGCATGC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGTGGGGCCAGGACTCATaGCCTTTTGCCTGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVWGQDS*PFAWSW
Trigger: CCAGCTCCAGGCAAAAGGGCATGAGTCCTGGCCCCA...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCTGGTGTTGTACCTCTaGTTTCAGGCCAAGATGGAT +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKLVLYL*FQAKMD
Trigger: ATCCATCTTGGCCTGAAAGCAGAGGTACAACACCAG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGTTGCTTTGGGCATTCTaGATTCTCTTCCTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPELLWAF*ILFLGD
Trigger: ATCACCCAGGAAGAGAATGCAGAATGCCCAAAGCAA...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCAAACCGTGTCCACTTaGGGGATGAGGTCGCTGTGC +
Preference number: 2 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLQTVST*GMRSLC
Trigger: GCACAGCGACCTCATCCCCCAAGTGGACACGGTTTG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGAATTGCCTTTGGGGCTaGTGTTGTACCTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKNCLWG*CCTSAF
Trigger: GAAAGCAGAGGTACAACACCAGCCCCAAAGGCAATT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGAAAGAAGGTTCAGGTTaGGAGTACGCTGGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELKEGSG*EYAGQW
Trigger: CCACTGACCAGCGTACTCCCAACCTGAACCTTCTTT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAGGCTTCAAATGGGGTaGATAGAGGGCAGACTCATC +
Preference number: 2 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLRLQMG*IEGRLI
Trigger: GATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCAGTGGGCCTGCAGCCTaGGTGTGGGAGGCCCAATGT +
Preference number: 2 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVSGPAA*VWEAQC
Trigger: ACATTGGGCCTCCCACACTCAGGCTGCAGGCCCACT...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGGCAGGGAGAAGGGGATaGAGAACATCGTCAGCGTGG +
Preference number: 2 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVAGRRG*RTSSAW
Trigger: CCACGCTGACGATGTTCTTCATCCCCTTCTCCCTGC...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTGTCCTCTTTGAACCATaGCTGGCCCTTGCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPVLFEP*LALAGR
Trigger: TCTACCTGCAAGGGCCAGGCATGGTTCAAAGAGGAC...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTCTCTGGCTCTGTCCATaGTGGACATGTCCTGCACAT +
Preference number: 2 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPLWLCP*WTCPAH
Trigger: ATGTGCAGGACATGTCCAGCATGGACAGAGCCAGAG...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTTTTCCAGGGAGTAGCTaGCAGCTCTGCAGTCTTTCC +
Preference number: 2 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPFPGSS*QLCSLS
Trigger: GGAAAGACTGCAGAGCTGCCAGCTACTCCCTGGAAA...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTTCTTTGAACCATGCCTaGCCCTTGCAGGTAGATGTG +
Preference number: 2 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLSLNHA*PLQVDV
Trigger: CACATCTACCTGCAAGGGCCAGGCATGGTTCAAAGA...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTTCAGACCTTCAGCAGTaGTCACAGACACCACAGGCT +
Preference number: 2 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVSDLQQ*SQTPQA
Trigger: AGCCTGTGGTGTCTGTGACCACTGCTGAAGGTCTGA...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTCAGCAACCACTGGAATaGGGTTTAGGAGCACCAGAA +
Preference number: 2 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLQQPLE*GLGAPE
Trigger: TTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTATAGTTGGAGAGCTCTaGCAAGGGTTAGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLIVGEL*QGLGQR
Trigger: CCTCTGCCCTAACCCTTGCCAGAGCTCTCCAACTAT...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAACTGTGTTGCTGGTGTaGGGAGGCGAGGCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQTVLLV*GGEAQG
Trigger: ACCCTGAGCCTCGCCTCCCCACACCAGCAACACAGT...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAAATGCCCTGGAAGATaGAGTATTACCAATCTCTTC +
Preference number: 2 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVKCPGR*SITNLF
Trigger: GAAGAGATTGGTAATACTCCATCTTCCAGGGCATTT...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 90 bp CCAGCCTTCCTTTCCAGAGCAACCAATCTGAAAACAGAATTGCCTTaGGGGCTGGTGTTGTACCTCTGCTTTCAGGCCAAGATGGATTCC +
Preference number: 2 (lower is better)
Translates to: PAFLSRATNLKTELP*GLVLYLCFQAKMDS
Trigger: GGAATCCATCTTGGCCTGAAAGCAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTGGAAAGGAAGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CAA 90 bp TGCTTTCTCCATCTCTTCTGGAAGCCAAGGGAATTTGCTGTGGGTTaGCTGGGCTTGGGCACTGCTCCTTCACATGACTCAAGAAAGATC +
Preference number: 2 (lower is better)
Translates to: CFLHLFWKPREFAVG*LGLGTAPSHDSRKI
Trigger: GATCTTTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCAGAAGAGATGGAGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACCAAGAGACAGAGCAATaGAACAAACACCCAACCAGA +
Preference number: 2 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNQETEQ*NKHPTR
Trigger: TCTGGTTGGGTGTTTGTTTCATTGCTCTGTCTCTTG...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTTTCTTAGATGAACTCTaGGAAAGCCCCCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSFLDEL*ESPHPP
Trigger: AGGAGGATGGGGGCTTTCTCAGAGTTCATCTAAGAA...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGCCATATCCACATCTGTaGATGGCTAGATATGTAGCC +
Preference number: 2 (lower is better)
Translates to: LSILRLHLQTLTFFSSELPYPHL*MARYVA
Trigger: GGCTACATATCTAGCCATTCACAGATGTGGATATGG...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTACAGAACAGACTCAGCTaGGCCCCACAGAACGAGAAC +
Preference number: 2 (lower is better)
Translates to: FCILFLGDHLQPVEKEALQNRLS*APQNEN
Trigger: GTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTG...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGAGTAGCTGGCAGCTCTaGAGTCTTTCCAGGCTAGTC +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLSSWQL*SLSRLV
Trigger: GACTAGCCTGGAAAGACTGCAGAGCTGCCAGCTACT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTTTCTGTTGGGCTTTGTaGAGAAGATGCTGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSFCWAL*RRCCFS
Trigger: GCTGAAGCAGCATCTTCTGCACAAAGCCCAACAGAA...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACAACTCAAGTAGATTGTaGATAGTCGGCCTCCCACTA +
Preference number: 2 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHNSSRL*IVGLPL
Trigger: TAGTGGGAGGCCGACTATCCACAATCTACTTGAGTT...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTAGACCTGGCCCAACATaGAGAGAAGAAGGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLRPGPT*REEGGE
Trigger: TTCCCCTCCTTCTTCTCTCCATGTTGGGCCAGGTCT...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAAAGCCACCCAGTCTTaGAGAACGGTTCTTGATGAG +
Preference number: 2 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLKATQS*RTVLDE
Trigger: CTCATCAAGAACCGTTCTCCAAGACTGGGTGGCTTT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATTCAATCAGCAGACCCTaGCCATCACCCATCTTTTCA +
Preference number: 2 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHSISRP*PSPIFS
Trigger: TGAAAAGATGGGTGATGGCCAGGGTCTGCTGATTGA...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTAAGGGCAGACTCATCCTaGTGGGGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: FCILFLGDHLQPVEKEALRADSS*WGVCVC
Trigger: ACACACACACACACCCCACCAGGATGAGTCTGCCCT...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGATAGTTGGAGAGCTCTaGCAAGGGTTAGGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLIVGEL*QGLGQR
Trigger: CCTCTGCCCTAACCCTTGCCAGAGCTCTCCAACTAT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCAGGGCACCTTCTAGGTaGGGCGCCTTCCCCTCTACT +
Preference number: 2 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVRAPSR*GAFPST
Trigger: AGTAGAGGGGAAGGCGCCCCACCTAGAAGGTGCCCT...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 90 bp CTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTaGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: LHRVSKDAVQEPGCC*ALFFLTVASFLSQH
Trigger: ATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CAA 90 bp CATCTCTTCTGGAAGCCAAGGGAATTTGCTGTGGGTTTGCTGGGCTaGGGCACTGCTCCTTCACATGACTCAAGAAAGATCTCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: HLFWKPREFAVGLLG*GTAPSHDSRKISVY
Trigger: ATACACAGAGATCTTTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCAGAAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTCCATATCCACATCTGTaGATGGCTAGATATGTAGCC +
Preference number: 2 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLPYPHL*MARYVA
Trigger: GGCTACATATCTAGCCATTCACAGATGTGGATATGG...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTAGGCTTCAAATGGGGTaGATAGAGGGCAGACTCATC +
Preference number: 2 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLRLQMG*IEGRLI
Trigger: GATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCT...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGCTGGTTGCAAACCATaGATGGCTGTGACCAATGGT +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLAGCKP*MAVTNG
Trigger: ACCATTGGTCACAGCCATTCATGGTTTGCAACCAGC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAACCAGGTCAGTCTGGGTaGCACATGAGCTGTGATCTG +
Preference number: 2 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQPGQSG*HMSCDL
Trigger: CAGATCACAGCTCATGTGTCACCCAGACTGACCTGG...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGGAAACACCCAAAAATaGCAGACTGGCTGCATCCAC +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLGNTQK*QTGCIH
Trigger: GTGGATGCAGCCAGTCTGTCATTTTTGGGTGTTTCC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTGCACTTTTTAGTGTTTaGTTCTCTCCCCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPALFSV*FSPHSS
Trigger: GCTGCTGTGGGGAGAGAAGCAAACACTAAAAAGTGC...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTGGGGCTCATTTTCGGTaGTACTGTCTTAACTCTGGC +
Preference number: 2 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLGAHFR*YCLNSG
Trigger: GCCAGAGTTAAGACAGTAGCACCGAAAATGAGCCCC...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTTCAATTAAGTTCTCATaGGAGTGGTTAGGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSSIKFS*EWLGSP
Trigger: GGGACTCCCTAACCACTCGCATGAGAACTTAATTGA...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTCAGAGTGTCCAAAGATaGTGTCCAAGAACCAGGATG +
Preference number: 2 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVQSVQR*CPRTRM
Trigger: CATCCTGGTTCTTGGACAGCATCTTTGGACACTCTG...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTTCAGCACTATCTACTaGATTCCTGAGAAATGCCAG +
Preference number: 2 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHFSTIY*IPEKCQ
Trigger: CTGGCATTTCTCAGGAATGCAGTAGATAGTGCTGAA...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCAGGGACGGTAGTGCTGTaGTGTGGACTTGTGTCTGAG +
Preference number: 2 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPGTVVL*CGLVSE
Trigger: CTCAGACACAAGTCCACACCACAGCACTACCGTCCC...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTAACTCAGTTAGTAGAATaGGCACAGCGCGAGACAGCG +
Preference number: 2 (lower is better)
Translates to: FCILFLGDHLQPVEKEALTQLVE*AQRETA
Trigger: CGCTGTCTCGCGCTGTGCCCATTCTACTAACTGAGT...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTCACAGGCAGGGTTTATaGTCAGTTCTACCTACATGT +
Preference number: 2 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSHRQGL*SVLPTC
Trigger: ACATGTAGGTAGAACTGACCATAAACCCTGCCTGTG...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGGGTTAGGGCAGAGGTaGCTTTGTGAACACTGGGCC +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLGLGQR*LCEHWA
Trigger: GGCCCAGTGTTCACAAAGCCACCTCTGCCCTAACCC...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTTACCCAGGACAGGATTaGATAAACCTTAACTCCTAC +
Preference number: 2 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSYPGQD*INLNSY
Trigger: GTAGGAGTTAAGGTTTATTCAATCCTGTCCTGGGTA...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGCTGGTGTTGTACCTCTaGTTTCAGGCCAAGATGGAT +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLLVLYL*FQAKMD
Trigger: ATCCATCTTGGCCTGAAAGCAGAGGTACAACACCAG...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAGAGAGACCACTGTGTTaGTGGTGTGGGGAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: KSFLFKERGKLHPISLPVERPLC*WCGEAR
Trigger: CCTCGCCTCCCCACACCAGCAACACAGTGGTCTCTC...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTGGACTTGTGTCTGAGTaGCCATGCCGGTCGGGGTCC +
Preference number: 2 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSGLVSE*PCRSGS
Trigger: GGACCCCGACCGGCATGGCCACTCAGACACAAGTCC...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAACCCGACCCCCAGACCTaGCCCAACATGGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKPDPQT*PNMERR
Trigger: TCTTCTCTCCATGTTGGGCCAGGTCTGGGGGTCGGG...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTCCAATTTGGGAGAACTaGCCTTTTCAAACACACAGG +
Preference number: 2 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPPIWEN*PFQTHR
Trigger: CCTGTGTGTTTGAAAAGGCCAGTTCTCCCAAATTGG...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCAGGAGGGAGTGGGTGGTaGATCCACTTCTTATACCAA +
Preference number: 2 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPGGSGW*IHFLYQ
Trigger: TTGGTATAAGAAGTGGATTCACCACCCACTCCCTCC...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAGAACACTGGGCCCTTTaGGCAATTAACCCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKEHWAL*AINPRP
Trigger: GGGCCTGGGGTTAATTGCTCAAAGGGCCCAGTGTTC...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGAATGGCCTTTACAGCTaGCTCGGGCTCCTATGTCGT +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLNGLYS*LGLLCR
Trigger: ACGACATAGGAGCCCGAGTCAGCTGTAAAGGCCATT...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTAGTGAGGAGGTGGGTATaGGTATTGATGATTGGCAGA +
Preference number: 2 (lower is better)
Translates to: FCILFLGDHLQPVEKEALVRRWV*VLMIGR
Trigger: TCTGCCAATCATCAATACTCATACCCACCTCCTCAC...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTTCAATTAAGTTCTCATaGGAGTGGTTAGGGAGTCCC +
Preference number: 2 (lower is better)
Translates to: KHSSNTANIYKAIPGPDASIKFS*EWLGSP
Trigger: GGGACTCCCTAACCACTCGCATGAGAACTTAATTGA...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAGAGCATGTGATGCCATaGTGCTTCCTGACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKEHVMP*CFLTGP
Trigger: GGGGCCAGTCAGGAAGCAGCATGGCATCACATGCTC...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTAAAAGCCACCCAGTCTTaGAGAACGGTTCTTGATGAG +
Preference number: 2 (lower is better)
Translates to: FCILFLGDHLQPVEKEALKATQS*RTVLDE
Trigger: CTCATCAAGAACCGTTCTCCAAGACTGGGTGGCTTT...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGTTTCCAGGGAGTAGCTaGCAGCTCTGCAGTCTTTCC +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLFPGSS*QLCSLS
Trigger: GGAAAGACTGCAGAGCTGCCAGCTACTCCCTGGAAA...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGTGGCTCTGTCCATGCTaGACATGTCCTGCACATGTG +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLWLCPC*TCPAHV
Trigger: CACATGTGCAGGACATGTCCAGCATGGACAGAGCCA...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGTCAGACCTTCAGCAGTaGTCACAGACACCACAGGCT +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLSDLQQ*SQTPQA
Trigger: AGCCTGTGGTGTCTGTGACCACTGCTGAAGGTCTGA...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGAAACAGAATTGCCTTTaGGGCTGGTGTTGTACCTCT +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLKQNCL*GWCCTS
Trigger: AGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACGCAAAAGCTAATACTTaGGGCTTTTTCAAGAAGTAC +
Preference number: 2 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNAKANT*GFFKKY
Trigger: GTACTTCTTGAAAAAGCCCCAAGTATTAGCTTTTGC...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCCCTAGAAGAGGAGTTTaGAGCCCAATGTGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVPRRGV*SPMCKD
Trigger: GTCCTTGCACATTGGGCTTCAAACTCCTCTTCTAGG...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTACTGGCAGCCCAGAGCTaGTTCTGGGTTAGGACAACA +
Preference number: 2 (lower is better)
Translates to: KSFLFKERGKLHPISLPVLAAQS*FWVRTT
Trigger: TGTTGTCCTAACCCAGAAGCAGCTCTGGGCTGCCAG...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAAGAAGGAGGGGAAATaGCAAGGCCAAGCGAGTGGC +
Preference number: 2 (lower is better)
Translates to: KSFLFKERGKLHPISLPVKKEGK*QGQASG
Trigger: GCCACTCGCTTGGCCTTGCCATTTCCCCTCCTTCTT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGAAAAGCTCCCTTTGCTaGGCGGAGAATGTGAAAGCC +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLKSSLC*AENVKA
Trigger: GGCTTTCACATTCTCCGCCCAGCAAAGGGAGCTTTT...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGGGCAGACTCATCCTaGTGGGGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: KSFLFKERGKLHPISLPVRADSS*WGVCVC
Trigger: ACACACACACACACCCCACCAGGATGAGTCTGCCCT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAGGCACGTGGAGGGAGTaGGTGGTGAATCCACTTCTT +
Preference number: 2 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKGTWRE*VVNPLL
Trigger: AAGAAGTGGATTCACCACCCACTCCCTCCACGTGCC...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGCCCAGAGCTGCTTCTaGGTTAGGACAACAAATAGG +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLAQSCF*VRTTNR
Trigger: CCTATTTGTTGTCCTAACCCAGAAGCAGCTCTGGGC...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCACCCCAGGATGAAGGTTaGCAGCACTTTTTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPPQDEG*QHFLVF
Trigger: AAACACTAAAAAGTGCTGTCAACCTTCATCCTGGGG...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGCCAAAACCCCAGGATaGAGGTTGACAGCACTTTTT +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLAKTPG*RLTALF
Trigger: AAAAAGTGCTGTCAACCTTCATCCTGGGGTTTTGGC...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGCAGACTCTTCTTAGATaGACTCTGAGAAAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLQTLLR*TLRKPP
Trigger: TGGGGGCTTTCTCAGAGTTCATCTAAGAAGAGTCTG...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGATCTCATCTGGTTTTaGCATCAGTTGCAATGCTTT +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLDLIWF*HQLQCF
Trigger: AAAGCATTGCAACTGATGTCAAAACCAGATGAGATC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGACTTCCTGTCCAGATTaGAAGTTAATGGCCTTTACA +
Preference number: 2 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLTSCPD*KLMAFT
Trigger: TGTAAAGGCCATTAACTTGCAATCTGGACAGGAAGT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTATTCCTCAGTCATTGTaGTCTTGGCAAAATATCAGT +
Preference number: 2 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLIPQSL*SWQNIS
Trigger: ACTGATATTTTGCCAAGAGCACAATGACTGAGGAAT...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCGGTTTCCAGTTCTACTaGAAATCACCACTGTGCCCA +
Preference number: 2 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVGFQFY*KSPLCP
Trigger: TGGGCACAGTGGTGATTTGCAGTAGAACTGGAAACC...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTGTACGTGCACATTTATaGGGGTTAACTATCAGAAAG +
Preference number: 2 (lower is better)
Translates to: KHSSNTANIYKAIPGPDAVRAHL*GLTIRK
Trigger: CTTTCTGATAGTTAACCCCCATAAATGTGCACGTAC...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR GCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGCTTAAGCTTGAGGTTTaGAGAGGAGCAGTAATAGTA +
Preference number: 2 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVLKLEV*RGAVIV
Trigger: TACTATTACTGCTCCTCTGCAAACCTCAAGCTTAAG...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTACAGCAACCACTGGAATaGGGTTTAGGAGCACCAGAA +
Preference number: 2 (lower is better)
Translates to: KSFLFKERGKLHPISLPVQQPLE*GLGAPE
Trigger: TTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGATGTTATGCTGTGAATaGTCACCACAGAGAGACCAC +
Preference number: 2 (lower is better)
Translates to: FKERGKLHPISLPVRSHLMLCCE*SPQRDH
Trigger: GTGGTCTCTCTGTGGTGACCATTCACAGCATAACAT...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR GCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAACTTCCTGTCCAGATTaGAAGTTAATGGCCTTTACA +
Preference number: 2 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQTSCPD*KLMAFT
Trigger: TGTAAAGGCCATTAACTTGCAATCTGGACAGGAAGT...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTACACAGGCAGGGTTTATaGTCAGTTCTACCTACATGT +
Preference number: 2 (lower is better)
Translates to: KSFLFKERGKLHPISLPVHRQGL*SVLPTC
Trigger: ACATGTAGGTAGAACTGACCATAAACCCTGCCTGTG...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR TCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTCCCCAGGATGAAGGTTaGCAGCACTTTTTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSPQDEG*QHFLVF
Trigger: AAACACTAAAAAGTGCTGTCAACCTTCATCCTGGGG...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CAA 90 bp TACCAGAGGTCTTCAGCAGTAAAGTCGACAAACTTTCAGGGAGTGTaGACTTTTGAGTCTAGAAAGAAAATATTGCAAACAAATCCGATG +
Preference number: 2 (lower is better)
Translates to: YQRSSAVKSTNFQGV*TFESRKKILQTNPM
Trigger: CATCGGATTTGTTTGCAATATTTTCTTTCTAGACTCAAAAGTCAACACTCCCTGAAAGTTTGTCGACTTTACTGCTGAAGACCTCTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp CAGCAGCGTGGAGGAACACAGCAAGCAGGGCCCGCCTaGTGGACTGACGTGTTCTCCACCCACCACCCAGCC +
Preference number: 3 (lower is better)
Translates to: QQRGGTQQAGPA*WTDVFSTHHPA
Trigger: GGCTGGGTGGTGGGTGGAGAACACGTCAGTCCACCAGGCGGGCCCTGCTTGCTGTGTTCCTCCACGCTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp ACATGGCCAGGCCAGCTCTCCAGGCCCACAACACCCTaGACAGAGGCCTTTGACCCTCCACTGGGGGCACTG +
Preference number: 3 (lower is better)
Translates to: TWPGQLSRPTTP*TEAFDPPLGAL
Trigger: CAGTGCCCCCAGTGGAGGGTCAAAGGCCTCTGTGCAGGGTGTTGTGGGCCTGGAGAGCTGGCCTGGCCATGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp AGGGACCTTCATGTGGGTCATGAGCATGTGATGCCATaGTGCTTCCTGACTGGCCCCTCGCCAGGCCTCCCT +
Preference number: 3 (lower is better)
Translates to: RDLHVGHEHVMP*CFLTGPSPGLP
Trigger: AGGGAGGCCTGGCGAGGGGCCAGTCAGGAAGCAGCATGGCATCACATGCTCATGACCCACATGAAGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp GCTGGGCTCAGGCCTGCTCATGCAGCAGATCCACCCTaGAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: AGLRPAHAADPP*SLFQAVNSPAS
Trigger: AGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGCAGGGTGGATCTGCTGCATGAGCAGGCCTGAGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp AGAGAAGAAGGAGGGGAAATGGCAAGGCCAAGCGAGTaGCTAAGGGAAGCACTGGGGGTGCTGGGAGCGCAC +
Preference number: 3 (lower is better)
Translates to: REEGGEMARPSE*LREALGVLGAH
Trigger: GTGCGCTCCCAGCACCCCCAGTGCTTCCCTTAGCCACTCGCTTGGCCTTGCCATTTCCCCTCCTTCTTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAACCATGCCTGGCCCTaGCAGGTAGATGTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVNHAWP*QVDVAA
Trigger: GGCTGCCACATCTACCTGCAAGGGCCAGGCATGGTT...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGGCTAAGGCAGGAAAATaGCTGGAGGCCGGGCATTTG +
Preference number: 3 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGAKAGK*LEAGHL
Trigger: CAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGC...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp TGCGAGTTAGCAGGCAAACCGTGTCCACTTGGGGGATaGGGTCGCTGTGCCAAGGTCCCTTCTGATCCTGCC +
Preference number: 3 (lower is better)
Translates to: CELAGKPCPLGG*GRCAKVPSDPA
Trigger: GGCAGGATCAGAAGGGACCTTGGCACAGCGACCTCATCCCCCAAGTGGACACGGTTTGCCTGCTAACTCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
3UTR TCA 72 bp GCCCTAACACTGAGGTCTTGCAGGGGCATGCTCTGCTaGGTGCCTGTGCTCCTGCCAATCCTGACGCCAGTA +
Preference number: 3 (lower is better)
Translates to: ALTLRSCRGMLC*VPVLLPILTPV
Trigger: TACTGGCGTCAGGATTGGCAGGAGCACAGGCACTCAGCAGAGCATGCCCCTGCAAGACCTCAGTGTTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 72 bp GACCTTCATGTGGGTCATGAGCATGTGATGCCATGCTaGTTCCTGACTGGCCCCTCGCCAGGCCTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: DLHVGHEHVMPC*FLTGPSPGLPS
Trigger: AGAAGGGAGGCCTGGCGAGGGGCCAGTCAGGAAGCAGCATGGCATCACATGCTCATGACCCACATGAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGCCCTTCTGTTGGGCTTaGTGCAGAAGATGCTGCTTC +
Preference number: 3 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGPFCWA*CRRCCF
Trigger: GAAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGG...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCCCTAACACTGAGGTCTaGCAGGGGCATGCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVPNTEV*QGHALL
Trigger: CAGCAGAGCATGCCCCTGCAAGACCTCAGTGTTAGG...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 72 bp GCCACAGGCAGGACAGCTCCCAGCTGTCTCGCTCAGTaGAGACTCCAGTGTCTGTGGAATGGGGGCTCATTT +
Preference number: 3 (lower is better)
Translates to: ATGRTAPSCLAQ*RLQCLWNGGSF
Trigger: AAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGCTGGGAGCTGTCCTGCCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 72 bp GTTCAGGGAGAAGTCCCCACCAAAGGTCTCCTTTACTaGCTGCCAGCTCCCCATGTGCTCCCTGGGCTGGTT +
Preference number: 3 (lower is better)
Translates to: VQGEVPTKGLLY*LPAPHVLPGLV
Trigger: AACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTTTGGTGGGGACTTCTCCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp AGGCAGTCTCAGTGGCTTCTCCGCGGAGGGAACACGTaGCTGTCTCACAATCAGCACACCCCAACTGCACTA +
Preference number: 3 (lower is better)
Translates to: RQSQWLLRGGNT*LSHNQHTPTAL
Trigger: TAGTGCAGTTGGGGTGTGCTGATTGTGAGACAGGCACGTGTTCCCTCCGCGGAGAAGCCACTGAGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp CCTGGTAAGGGGGTCATAGTCGACACCAGAAGCTCTTaGAGGGTGTGTGATGGGCCTTTTGGCCCAGGTCAG +
Preference number: 3 (lower is better)
Translates to: PGKGVIVDTRSS*RVCDGPFGPGQ
Trigger: CTGACCTGGGCCAAAAGGCCCATCACACACCCTGCAAGAGCTTCTGGTGTCGACTATGACCCCCTTACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATaGATTAGGCAGCCGGAGGGCACACAGGACCACTGT +
Preference number: 3 (lower is better)
Translates to: VKKRVLVQQVPT*IRQPEGTQDHC
Trigger: ACAGTGGTCCTGTGTGCCCTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCACTTGGAGAACGGTTCTaGATGAGCCGTCTCAGTGCA +
Preference number: 3 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSLGERF*MSRLSA
Trigger: TGCACTGAGACGGCTCATCAAGAACCGTTCTCCAAG...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp CCGAGGAAGGAAGAGTCTGTGCAGAACAGACTCAGCTaGGCCCCACAGAACGAGAACAGGCTGTTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: PRKEESVQNRLS*APQNENRLFPA
Trigger: AGCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACAGACTCTTCCTTCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp TGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTaGCACGGTCTGGAGAAGGGGTTGAACCAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: CRTMSLSLGISG*HGLEKGLNQFR
Trigger: CCTGAACTGGTTCAACCCCTTCTCCAGACCGTGTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp ATGGGGAAGCCCTTTCCAGGGAGTAGCTGGCAGCTCTaGAGTCTTTCCAGGCTAGTCTCCCCTGATGTCAGT +
Preference number: 3 (lower is better)
Translates to: MGKPFPGSSWQL*SLSRLVSPDVS
Trigger: ACTGACATCAGGGGAGACTAGCCTGGAAAGACTGCAGAGCTGCCAGCTACTCCCTGGAAAGGGCTTCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 72 bp CCATCACCCCTCTCGTGGGTCATAGTTGGAGAGCTCTaGCAAGGGTTAGGGCAGAGGTGGCTTTGTGAACAC +
Preference number: 3 (lower is better)
Translates to: PSPLSWVIVGEL*QGLGQRWLCEH
Trigger: GTGTTCACAAAGCCACCTCTGCCCTAACCCTTGCCAGAGCTCTCCAACTATGACCCACGAGAGGGGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 72 bp TGGGCCCCGCTCGGTTTCTGGTTCGGTAGCCTGGGGTaGGGACCGAGAATGTGCATTTCTAACAAGTTCTCA +
Preference number: 3 (lower is better)
Translates to: WAPLGFWFGSLG*GPRMCISNKFS
Trigger: TGAGAACTTGTTAGAAATGCACATTCTCGGTCCCCACCCCAGGCTACCGAACCAGAAACCGAGCGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTGCAAACCGTGTCCACTaGGGGGATGAGGTCGCTGTG +
Preference number: 3 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSANRVH*GDEVAV
Trigger: CACAGCGACCTCATCCCCCAAGTGGACACGGTTTGC...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCGAACCAGGATGCTGCTaGGCTCTTTTCTTTCTCACG +
Preference number: 3 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVEPGCC*ALFFLT
Trigger: CGTGAGAAAGAAAAGAGCCAAGCAGCATCCTGGTTC...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 72 bp AGCAGTGGTCACAGACACCACAGGCTTCAAATGGGGTaGATAGAGGGCAGACTCATCCTGGTGGGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SSGHRHHRLQMG*IEGRLILVGCV
Trigger: CACACACCCCACCAGGATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 72 bp CAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTaGTCAGACCTTCAGCAGTGGTCACAGACACCACAG +
Preference number: 3 (lower is better)
Translates to: QPLEWGLGAPER*SDLQQWSQTPQ
Trigger: CTGTGGTGTCTGTGACCACTGCTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 72 bp CCTGCACAGAGGCCTTTGACCCTCCACTGGGGGCACTaGTTTCTCCATCTCTTCTGGAAGCCAAGGGAATTT +
Preference number: 3 (lower is better)
Translates to: PAQRPLTLHWGH*FLHLFWKPREF
Trigger: AAATTCCCTTGGCTTCCAGAAGAGATGGAGAAAGCAGTGCCCCCAGTGGAGGGTCAAAGGCCTCTGTGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp TCCTCCATTGTTTCGGTGTCTGACAGCGATGTCACCTaGCGCACCATGTCTTTGTCACTGGGGATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: SSIVSVSDSDVT*RTMSLSLGISG
Trigger: GCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp CCACGCACAGCGTCATGTCTCACTCAGTTAGTAGAATaGGCACAGCGCGAGACAGCGCCCTCTACATTAGTC +
Preference number: 3 (lower is better)
Translates to: PRTASCLTQLVE*AQRETAPSTLV
Trigger: GACTAATGTAGAGGGCGCTGTCTCGCGCTGTGCCCATTCTACTAACTGAGTGAGACATGACGCTGTGCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
3UTR CCA 72 bp GTAGAGCTTAATGCAGGGTCCTCTTTGAACCATGCCTaGCCCTTGCAGGTAGATGTGGCAGCCACCTCTACC +
Preference number: 3 (lower is better)
Translates to: VELNAGSSLNHA*PLQVDVAATST
Trigger: GGTAGAGGTGGCTGCCACATCTACCTGCAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCATTAAGCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 72 bp CAAAGGTCAAGACGTGTTCAGGTCATGTATCCAGGCTaGTACAATGCCCCTGGCTCTAGACTACTCACCGGC +
Preference number: 3 (lower is better)
Translates to: QRSRRVQVMYPG*YNAPGSRLLTG
Trigger: GCCGGTGAGTAGTCTAGAGCCAGGGGCATTGTAGCAGCCTGGATACATGACCTGAACACGTCTTGACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp CTTTGCTGGGCGGAGAATGTGAAAGCCACCCAGTCTTaGAGAACGGTTCTTGATGAGCCGTCTCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: LCWAENVKATQS*RTVLDEPSQCR
Trigger: TCTGCACTGAGACGGCTCATCAAGAACCGTTCTCCAAGACTGGGTGGCTTTCACATTCTCCGCCCAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGAACCATGCCTGGCCCTaGCAGGTAGATGTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLNHAWP*QVDVAA
Trigger: GGCTGCCACATCTACCTGCAAGGGCCAGGCATGGTT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTCCTAACACTGAGGTCTaGCAGGGGCATGCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVPNTEV*QGHALL
Trigger: CAGCAGAGCATGCCCCTGCAAGACCTCAGTGTTAGG...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTAGGACTCATGCCCTTTaGCCTGGAGCTGGAAGGGGG +
Preference number: 3 (lower is better)
Translates to: KHSSNTANIYKAIPGPDARTHAL*PGAGRG
Trigger: CCCCCTTCCAGCTCCAGGCAAAAGGGCATGAGTCCT...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAAAAGAAAGAGGCAAATaGCACCCAATCTCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSKERGK*HPISLP
Trigger: AGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTT...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGTTAAGGGTATGGTGTaGCCAATGTCCAGGGTTTTA +
Preference number: 3 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSVKGMV*PMSRVL
Trigger: TAAAACCCTGGACATTGGCAACACCATACCCTTAAC...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp ATGGGCCTTTTGGCCCAGGTCAGTCTGGGTGACACATaGGCTGTGATCTGTGAACAAACTCACCAACACTCC +
Preference number: 3 (lower is better)
Translates to: MGLLAQVSLGDT*AVICEQTHQHS
Trigger: GGAGTGTTGGTGAGTTTGTTCACAGATCACAGCTCATGTGTCACCCAGACTGACCTGGGCCAAAAGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp GTTGACACAAGTCTAAAGGGACCTTCATGTGGGTCATaGGCATGTGATGCCATGCTGCTTCCTGACTGGCCC +
Preference number: 3 (lower is better)
Translates to: VDTSLKGPSCGS*ACDAMLLPDWP
Trigger: GGGCCAGTCAGGAAGCAGCATGGCATCACATGCTCATGACCCACATGAAGGTCCCTTTAGACTTGTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp TGGGCCAAAGAGAGGAACAAAGGCACGTGGAGGGAGTaGGTGGTGAATCCACTTCTTATACCAAACGGGGAT +
Preference number: 3 (lower is better)
Translates to: WAKERNKGTWRE*VVNPLLIPNGD
Trigger: ATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCACGTGCCTTTGTTCCTCTCTTTGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 72 bp TCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTaGGTCATAGTTGGAGAGCTCTGGCAAGGGTTAGGG +
Preference number: 3 (lower is better)
Translates to: SVDVRIPPSPLS*VIVGELWQGLG
Trigger: CCCTAACCCTTGCCAGAGCTCTCCAACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 72 bp CTCCCTTCTTGGCACAGAAGCAGTGACCAGCTGAGATaGTTTGCTTTGGGCATTCTGCATTCTCTTCCTGGG +
Preference number: 3 (lower is better)
Translates to: LPSWHRSSDQLR*FALGILHSLPG
Trigger: CCCAGGAAGAGAATGCAGAATGCCCAAAGCAAACCATCTCAGCTGGTCACTGCTTCTGTGCCAAGAAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGTTCAAAAGCTCCCTTaGCTGGGCGGAGAATGTGAA +
Preference number: 3 (lower is better)
Translates to: LSILRLHLQTLTFFSSELVQKLP*LGGECE
Trigger: TTCACATTCTCCGCCCAGCAAAGGGAGCTTTTGAAC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGAAGATGGGCACCAATTaGGGAGAACTGGCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKKMGTN*GELAFS
Trigger: TGAAAAGGCCAGTTCTCCCAAATTGGTGCCCATCTT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCTTTCTGGTTGCTCTGTaGATGTTAGAATCCCACCAT +
Preference number: 3 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVFLVAL*MLESHH
Trigger: ATGGTGGGATTCTAACATCAACAGAGCAACCAGAAA...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGAATCTGAAAACAGAATaGCCTTTGGGGCTGGTGTTG +
Preference number: 3 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPENLKTE*PLGLVL
Trigger: CAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATT...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTATGTGTGATGGGCCTTTaGGCCCAGGTCAGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: FCILFLGDHLQPVEKEALCVMGL*AQVSLG
Trigger: ACCCAGACTGACCTGGGCCAAAAGGCCCATCACACA...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGCAAAGTTCTTAAGCTaGAGGTTTGCAGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: LSILRLHLQTLTFFSSELAKFLS*RFAEEQ
Trigger: CTGCTCCTCTGCAAACCTCAAGCTTAAGAACTTTGC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp GGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGGTaGGCGTCAACTTCCTGTCCAGATTGCAAGTTAATG +
Preference number: 3 (lower is better)
Translates to: GPYSQSSSYPKW*ASTSCPDCKLM
Trigger: CATTAACTTGCAATCTGGACAGGAAGTTGACGCTCACCACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 72 bp TATGGCAGACCCGGCTACAGAGGAAACACCCAAAAATaGCAGACTGGCTGCATCCACACTGACTTGGACTCA +
Preference number: 3 (lower is better)
Translates to: YGRPGYRGNTQK*QTGCIHTDLDS
Trigger: TGAGTCCAAGTCAGTGTGGATGCAGCCAGTCTGTCATTTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp CTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATaGGGGCTCATTTTCGGTGCTACTGTCTTAACTCTG +
Preference number: 3 (lower is better)
Translates to: LSRSVKTPVSVE*GLIFGATVLTL
Trigger: CAGAGTTAAGACAGTAGCACCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 72 bp GGAAGCCAAGGGAATTTGCTGTGGGTTTGCTGGGCTTaGGCACTGCTCCTTCACATGACTCAAGAAAGATCT +
Preference number: 3 (lower is better)
Translates to: GSQGNLLWVCWA*ALLLHMTQERS
Trigger: AGATCTTTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp TCTTCTGGAAGCCAAGGGAATTTGCTGTGGGTTTGCTaGGCTTGGGCACTGCTCCTTCACATGACTCAAGAA +
Preference number: 3 (lower is better)
Translates to: SSGSQGNLLWVC*AWALLLHMTQE
Trigger: TTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGTACATGGGAACTCTTaGTACTGTTTTTGTCACATT +
Preference number: 3 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSVHGNS*YCFCHI
Trigger: AATGTGACAAAAACAGTACAAAGAGTTCCCATGTAC...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp AAGAGAGGAACAAAGGCACGTGGAGGGAGTGGGTGGTaGATCCACTTCTTATACCAAACGGGGATAAGAACC +
Preference number: 3 (lower is better)
Translates to: KRGTKARGGSGW*IHFLYQTGIRT
Trigger: GGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCACGTGCCTTTGTTCCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 72 bp TTCTGGTTCGGTAGCCTGGGGTGGGGACCGAGAATGTaGATTTCTAACAAGTTCTCAGGTGATGCTGATGTT +
Preference number: 3 (lower is better)
Translates to: FWFGSLGWGPRM*ISNKFSGDADV
Trigger: AACATCAGCATCACCTGAGAACTTGTTAGAAATGCACATTCTCGGTCCCCACCCCAGGCTACCGAACCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR GCA 72 bp ATGAAACGTATCAACACCATATGCCTCCTGATACGGTaGAACGAGGACACATTGCTTCAGCAGTGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: MKRINTICLLIR*NEDTLLQQCSC
Trigger: GCAGGAGCACTGCTGAAGCAATGTGTCCTCGTTGCACCGTATCAGGAGGCATATGGTGTTGATACGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp CCTCCTTGTGAGGAGGTGGGTATGAGTATTGATGATTaGCAGATGGGGAAGAAACAGAAGTTCCAAGAGGCC +
Preference number: 3 (lower is better)
Translates to: PPCEEVGMSIDD*QMGKKQKFQEA
Trigger: GGCCTCTTGGAACTTCTGTTTCTTCCCCATCTGCCAATCATCAATACTCATACCCACCTCCTCACAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAAAACTTCCTGTCCAGATaGCAAGTTAATGGCCTTTAC +
Preference number: 3 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKNFLSR*QVNGLY
Trigger: GTAAAGGCCATTAACTTGCAATCTGGACAGGAAGTT...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCCCTTTGGGGCTGGTGTaGTACCTCTGCTTTCAGGCC +
Preference number: 3 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVPLGLV*YLCFQA
Trigger: GGCCTGAAAGCAGAGGTACAACACCAGCCCCAAAGG...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGAAAAGAAGGTTCAGGTaGGGAGTACGCTGGTCAGTG +
Preference number: 3 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLKRRFR*GVRWSV
Trigger: CACTGACCAGCGTACTCCCAACCTGAACCTTCTTTT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp GTCACAAACTGGAGGAGACTAAGGAGACATCGCAAATaGTGCAGTGTGGGATCCTGGAACAGAAAAGGGTGT +
Preference number: 3 (lower is better)
Translates to: VTNWRRLRRHRK*CSVGSWNRKGC
Trigger: ACACCCTTTTCTGTTCCAGGATCCCACACTGCATCATTTGCGATGTCTCCTTAGTCTCCTCCAGTTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp GAGATGGTTTGCTTTGGGCATTCTGCATTCTCTTCCTaGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTT +
Preference number: 3 (lower is better)
Translates to: EMVCFGHSAFSS*VIICSLLRKRL
Trigger: AAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAATGCCCAAAGCAAACCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGAAAACTCAAGTAGATaGTGGATAGTCGGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLENSSR*WIVGLP
Trigger: TGGGAGGCCGACTATCCACAATCTACTTGAGTTTTC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTATAAGAACCCTTCTGTaGGGCTTTGTGCAGAAGATG +
Preference number: 3 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVIRTLL*GFVQKM
Trigger: CATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTAT...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGGACTCATGCCCTTTaGCCTGGAGCTGGAAGGGGG +
Preference number: 3 (lower is better)
Translates to: KSFLFKERGKLHPISLPVRTHAL*PGAGRG
Trigger: CCCCCTTCCAGCTCCAGGCAAAAGGGCATGAGTCCT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCTCTCTGGCAGGATCGTaGCCCTTCACAGAGTGTCCA +
Preference number: 3 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVSLAGS*PFTECP
Trigger: TGGACACTCTGTGAAGGGCAACGATCCTGCCAGAGA...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGAAAACAGAATTGCCTTaGGGGCTGGTGTTGTACCTC +
Preference number: 3 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLKTELP*GLVLYL
Trigger: GAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCTGGCTGAGGTCTACCTaGGAGATGGGGTCAGTGAAG +
Preference number: 3 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVWLRST*EMGSVK
Trigger: CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCA...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTAAAGATGGGCACCAATTaGGGAGAACTGGCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: FCILFLGDHLQPVEKEALKMGTN*GELAFS
Trigger: TGAAAAGGCCAGTTCTCCCAAATTGGTGCCCATCTT...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp TGCCATTCATGTGGCATGCTCCCAGATAGGCACTCTTaGATTATACTCAACCTCCTCACCAACCTCATAAAG +
Preference number: 3 (lower is better)
Translates to: CHSCGMLPDRHS*IILNLLTNLIK
Trigger: CTTTATGAGGTTGGTGAGGAGGTTGAGTATAATCCAAGAGTGCCTATCTGGGAGCATGCCACATGAATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CCA 72 bp CCCAAAAATGACAGACTGGCTGCATCCACACTGACTTaGACTCAAAGCCATGACCATAGGTTTTTATGGCCT +
Preference number: 3 (lower is better)
Translates to: PKNDRLAASTLT*TQSHDHRFLWP
Trigger: AGGCCATAAAAACCTATGGTCATGGCTTTGAGTCCAAGTCAGTGTGGATGCAGCCAGTCTGTCATTTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAATGCAGGGTCCTCTTaGAACCATGCCTGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: KSFLFKERGKLHPISLPVNAGSS*NHAWPL
Trigger: CAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCATT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR GCA 72 bp TGCAATGCTTTCAGTCTGAGGCTAAGCAGAATGTTATaGTGTGAATGGTCACCACAGAGAGACCACTGTGTT +
Preference number: 3 (lower is better)
Translates to: CNAFSLRLSRML*CEWSPQRDHCV
Trigger: AACACAGTGGTCTCTCTGTGGTGACCATTCACAGCATAACATTCTGCTTAGCCTCAGACTGAAAGCATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CCA 72 bp CTGACTTGGACTCAAAGCCATGACCATAGGTTTTTATaGCCTCCTTGTGAGGAGGTGGGTATGAGTATTGAT +
Preference number: 3 (lower is better)
Translates to: LTWTQSHDHRFL*PPCEEVGMSID
Trigger: ATCAATACTCATACCCACCTCCTCACAAGGAGGCCATAAAAACCTATGGTCATGGCTTTGAGTCCAAGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTACTTGGAGAACGGTTCTaGATGAGCCGTCTCAGTGCA +
Preference number: 3 (lower is better)
Translates to: KSFLFKERGKLHPISLPVLGERF*MSRLSA
Trigger: TGCACTGAGACGGCTCATCAAGAACCGTTCTCCAAG...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR TCA 72 bp ATAGGTTTTTATGGCCTCCTTGTGAGGAGGTGGGTATaGGTATTGATGATTGGCAGATGGGGAAGAAACAGA +
Preference number: 3 (lower is better)
Translates to: IGFYGLLVRRWV*VLMIGRWGRNR
Trigger: TCTGTTTCTTCCCCATCTGCCAATCATCAATACTCATACCCACCTCCTCACAAGGAGGCCATAAAAACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGAGATCTCATCTGGTTTaGACATCAGTTGCAATGCTT +
Preference number: 3 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVRSHLV*TSVAML
Trigger: AAGCATTGCAACTGATGTCAAAACCAGATGAGATCT...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGATAAAATGTTTACCTTaGGTGAGACTGACTGAAAGG +
Preference number: 3 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLIKCLP*VRLTER
Trigger: CCTTTCAGTCAGTCTCACCAAAGGTAAACATTTTAT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR TCA 72 bp GTAATAAGTAGCCAAGCAGACATTTCAACCAAAGACTaGAGCCAGGACCCAAATACTTGGTCACCAGACTAT +
Preference number: 3 (lower is better)
Translates to: VISSQADISTKD*SQDPNTWSPDY
Trigger: ATAGTCTGGTGACCAAGTATTTGGGTCCTGGCTTCAGTCTTTGGTTGAAATGTCTGCTTGGCTACTTATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAACCTCAAGAACACCTTaGAGGAGGATTCTAGCAAAA +
Preference number: 3 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKTSRTP*RRILAK
Trigger: TTTTGCTAGAATCCTCCTCAAAGGTGTTCTTGAGGT...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGTTTaGACATCAGTTGCAATGCTT +
Preference number: 3 (lower is better)
Translates to: KSFLFKERGKLHPISLPVRSHLV*TSVAML
Trigger: AAGCATTGCAACTGATGTCAAAACCAGATGAGATCT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTATCAGTCATTGTGCTCTaGGCAAAATATCAGTCTGAA +
Preference number: 3 (lower is better)
Translates to: KSFLFKERGKLHPISLPVSVIVL*AKYQSE
Trigger: TTCAGACTGATATTTTGCCAAGAGCACAATGACTGA...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR-3UTR CAA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAATACATTCCTCAGTCATaGTGCTCTTGGCAAAATATC +
Preference number: 3 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKYIPQS*CSWQNI
Trigger: GATATTTTGCCAAGAGCACAATGACTGAGGAATGTA...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGCCGCTGCCTTCCCCTaGAGTCCCCAACCCGGGACC +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASAAAFP*SPQPGT
Trigger: GGTCCCGGGTTGGGGACTGCAGGGGAAGGCAGCGGC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGGCGCCGCGGCTCTCTaGACTCGGCCAGACACCGGG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLGAAAL*TRPDTG
Trigger: CCCGGTGTCTGGCCGAGTCCAGAGAGCCGCGGCGCC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGCCCGCCTGGTGGACTaGCGTGTTCTCCACCCACCA +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASARLVD*RVLHPP
Trigger: TGGTGGGTGGAGAACACGTCAGTCCACCAGGCGGGC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGCCGCTGCCTTCCCCTaGAGTCCCCAACCCGGGACC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLAAAFP*SPQPGT
Trigger: GGTCCCGGGTTGGGGACTGCAGGGGAAGGCAGCGGC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCAGGGGCATGCTCTGCTaGGTGCCTGTGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASRGMLC*VPVLLP
Trigger: TGGCAGGAGCACAGGCACTCAGCAGAGCATGCCCCT...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGCTCTTGCAGGGTGTGTaGTGGGCCTTTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGLLQGV*WAFWPR
Trigger: CCTGGGCCAAAAGGCCCATCACACACCCTGCAAGAG...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGCCATGCTGCTTCCTaGCTGGCCCCTCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLCHAAS*LAPRQA
Trigger: GGCCTGGCGAGGGGCCAGTCAGGAAGCAGCATGGCA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCTCGGGCTTCGGCGATaGCTCCTCGGAACGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLLGLRR*LLGTRR
Trigger: GCGCCTCGTTCCGAGGAGCCATCGCCGAAGCCCGAG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAATGCTGCTTCCTGACTaGCCCCTCGCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSMLLPD*PLARPP
Trigger: GGGAGGCCTGGCGAGGGGCCAGTCAGGAAGCAGCAT...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp CAGCTCCCCATGTGCTCCCTGGGCTGGTTCTTTCGTTaGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: QLPMCSLGWFFR*RRSMPCREKGM
Trigger: CATCCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGGGCTCGGTCGGGCTTaGTGCTGCAGCATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLGLGRA*CCSIWG
Trigger: GCCCCAAATGCTGCAGCATCAAGCCCGACCGAGCCC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGGGGAAGCACTGGGGGTaGTGGGAGCGCACCATGCCC +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRGKHWG*WERTMP
Trigger: GGGCATGGTGCGCTCCCAGCACCCCCAGTGCTTCCC...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGGTCTTGCAGGGGCATaGTCTGCTGAGTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASGLAGA*SAECLC
Trigger: GCACAGGCACTCAGCAGAGCATGCCCCTGCAAGACC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGCAGCAAGTGCCAACATaGATTAGGCAGCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGQQVPT*IRQPEG
Trigger: GCCCTCCGGCTGCCTAATGCATGTTGGCACTTGCTG...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCGCCGCGGCTCTCTaGACTCGGCCAGACACCGGG +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLGAAAL*TRPDTG
Trigger: CCCGGTGTCTGGCCGAGTCCAGAGAGCCGCGGCGCC...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCCAGGCTAGTCTCCCCTaGTGTCAGTGTCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASQASLP*CQCPNP
Trigger: TGGGTTGGGACACTGACATCAGGGGAGACTAGCCTG...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGCAGAGGTGGCTTTGTaGACACTGGGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASAEVAL*TLGPLS
Trigger: GCTCAAAGGGCCCAGTGTTCACAAAGCCACCTCTGC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCTGCCCGTCTCATCTGTaGAGATGGAGTGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASCPSHL*RWSAPG
Trigger: CCCAGGTGCACTCCATCTGCACAGATGAGACGGGCA...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339420.7
CDS-3UTR GCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGCTCCACTGGGGGCACTaGTTTCTCCATCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGLHWGH*FLHLFW
Trigger: CCAGAAGAGATGGAGAAAGCAGTGCCCCCAGTGGAG...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGGTCCCTCAGAGGACTaGTGGGGTGTGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLGPSED*WGVGGQ
Trigger: CTGTCCACCCACACCCCAGCAGTCCTCTGAGGGACC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTGGCGCCGCGGCTCTCTaGACTCGGCCAGACACCGGG +
Preference number: 4 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVGAAAL*TRPDTG
Trigger: CCCGGTGTCTGGCCGAGTCCAGAGAGCCGCGGCGCC...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGCGTGGCAAAGGGGCTaGCCCAGCCTAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLAWQRG*PSLERR
Trigger: CCTTCTCTCTAGGCTGGGCCAGCCCCTTTGCCACGC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGCCTTCCCTTGGTCTaGCGTGGCAAAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLCLPLV*RGKGAG
Trigger: GCCAGCCCCTTTGCCACGCCAGACCAAGGGAAGGCA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCTCCCCCGACCCCCAGACCTaGCCCAACATGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AEQTQLSPTEREQAVPCSPDPQT*PNMERR
Trigger: TCTTCTCTCCATGTTGGGCCAGGTCTGGGGGTCGGG...GGAGCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCAGCCACAGGCCCCTTaGGGCCAGGACTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKQPQAP*GQDSCP
Trigger: AGGGCATGAGTCCTGGCCCCAAGGGGCCTGTGGCTG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACCATCGGCTCCTCCTGTaGGCCCAACAGAGCGGGATC +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADHRLLL*AQQSGI
Trigger: GATCCCGCTCTGTTGGGCCCACAGGAGGAGCCGATG...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGCCTTTGACCCTCCACTaGGGGCACTGCTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGPLTLH*GHCFLH
Trigger: ATGGAGAAAGCAGTGCCCCCAGTGGAGGGTCAAAGG...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGGAGGAGGTAAAGACATaGCCAGGCCAGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NSPASGCRLQLSHQATEREEVKT*PGQLSR
Trigger: CCTGGAGAGCTGGCCTGGCCATGTCTTTACCTCCTC...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGGCAGGGCCCGCCTGGTaGACTGACGTGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQAGPAW*TDVFST
Trigger: GGTGGAGAACACGTCAGTCCACCAGGCGGGCCCTGC...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCAGTGGGCAGTCTGTTGTaGCCCAGGTCACCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARAVGSLL*PRSPPG
Trigger: TCCCGGGGGTGACCTGGGCCACAACAGACTGCCCAC...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGCCAAGGTCCCTTCTaGTCCTGCCCTTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLCQGPF*SCPSQA
Trigger: GGCCTGAGAAGGGCAGGATCAGAAGGGACCTTGGCA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGTCCACTTGGGGGATaGGGTCGCTGTGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLCPLGG*GRCAKV
Trigger: GACCTTGGCACAGCGACCTCATCCCCCAAGTGGACA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCACAGGCTAGTCTCCCCTaGTGTCAGTGTCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSQASLP*CQCPNP
Trigger: TGGGTTGGGACACTGACATCAGGGGAGACTAGCCTG...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCAAGTGGGCCTGCAGCCTaGGTGTGGGAGGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARASGPAA*VWEAQC
Trigger: ACATTGGGCCTCCCACACTCAGGCTGCAGGCCCACT...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGCTGCACAGAGGCCTTTaGCCCTCCACTGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRLHRGL*PSTGGT
Trigger: AGTGCCCCCAGTGGAGGGTCAAAGGCCTCTGTGCAG...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGAAACAGCATGCGAGGTaGAGAAGCGGGTGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: NSPASGCRLQLSHQATERKQHAR*RSGCSY
Trigger: GTACGAGCACCCGCTTCTTCACCTCGCATGCTGTTT...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCTCCGCTGGTTCTTTCGTTTaGGGCGCTCGATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AEQTQLSPTEREQAVPCSAGSFV*GARCPA
Trigger: TGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGC...GGAGCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGTGTCTGAGTGGCCATaGCGGTCGGGGTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLVSEWP*RSGSFR
Trigger: TCTGAAGGACCCCGACCGGCATGGCCACTCAGACAC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCCTGGCAGCCCAGAGCTaGTTCTGGGTTAGGACAACA +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASLAAQS*FWVRTT
Trigger: TGTTGTCCTAACCCAGAAGCAGCTCTGGGCTGCCAG...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGGCGTGGCAAAGGGGCTaGCCCAGCCTAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKAWQRG*PSLERR
Trigger: CCTTCTCTCTAGGCTGGGCCAGCCCCTTTGCCACGC...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCGGGTTAGGGCAGAGGTaGCTTTGTGAACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVGLGQR*LCEHWA
Trigger: GGCCCAGTGTTCACAAAGCCACCTCTGCCCTAACCC...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATGGGCTCGGTCGGGCTTaGTGCTGCAGCATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHGLGRA*CCSIWG
Trigger: GCCCCAAATGCTGCAGCATCAAGCCCGACCGAGCCC...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACATGCAGGGTCCTCTTTaGACCATGCCTGGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADMQGPL*TMPGPC
Trigger: GCAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCAT...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGTCTTACCCAAAGTGGTaGGCGTCAACTTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGSYPKW*ASTSCP
Trigger: TGGACAGGAAGTTGACGCTCACCACTTTGGGTAAGA...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTGCCGCTGCCTTCCCCTaGAGTCCCCAACCCGGGACC +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLAAAFP*SPQPGT
Trigger: GGTCCCGGGTTGGGGACTGCAGGGGAAGGCAGCGGC...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCACCGCTTACAAACACTaGAGTGGTGGGCTCGGTCGG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLTAYKH*SGGLGR
Trigger: CCGACCGAGCCCACCACTGCAGTGTTTGTAAGCGGT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGGCATGCTCTGCTGAGTaGCTGTGCTCCTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPEACSAE*LCSCQS
Trigger: GGATTGGCAGGAGCACAGGCACTCAGCAGAGCATGC...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCCAAGAAAGTGGGCCTaGAGCCTGAGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKPRKWA*SLSVGG
Trigger: GCCTCCCACACTCAGGCTGCAGGCCCACTTTCTTGG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGTCATGTATCCAGGCTaGTACAATGCCCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASVMYPG*YNAPGS
Trigger: AGAGCCAGGGGCATTGTAGCAGCCTGGATACATGAC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACAGCTGTCAACTCACCTaGCTCTGGGTGTCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADSCQLT*LWVSAA
Trigger: TGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCT...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGGACTTGTGTCTGAGTaGCCATGCCGGTCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELGLVSE*PCRSGS
Trigger: GGACCCCGACCGGCATGGCCACTCAGACACAAGTCC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCAAACCGTGTCCACTTaGGGGATGAGGTCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLQTVST*GMRSLC
Trigger: GCACAGCGACCTCATCCCCCAAGTGGACACGGTTTG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGCAAAGGAAAGAGGCCTaGTGGGGCAAGCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: NSPASGCRLQLSHQATERQRKEA*WGKLVQ
Trigger: TTGAACCAGCTTGCCCCACCAGGCCTCTTTCCTTTG...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGAAGCACTGGGGGTGCTaGGAGCGCACCATGCCCATA +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKKHWGC*ERTMPI
Trigger: TATGGGCATGGTGCGCTCCCAGCACCCCCAGTGCTT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCTTTCCAGGGAGTAGCTaGCAGCTCTGCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASFPGSS*QLCSLS
Trigger: GGAAAGACTGCAGAGCTGCCAGCTACTCCCTGGAAA...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCTGGCTCTGTCCATGCTaGACATGTCCTGCACATGTG +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASWLCPC*TCPAHV
Trigger: CACATGTGCAGGACATGTCCAGCATGGACAGAGCCA...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGACTGTGTTGCTGGTGTaGGGAGGCGAGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRTVLLV*GGEAQG
Trigger: ACCCTGAGCCTCGCCTCCCCACACCAGCAACACAGT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCTGGGTTTGCTGGGCTTaGGCACTGCTCCTTCACATG +
Preference number: 4 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVWVCWA*ALLLHM
Trigger: CATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCA...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACTGCCAAGGTCCCTTCTaGTCCTGCCCTTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNCQGPF*SCPSQA
Trigger: GGCCTGAGAAGGGCAGGATCAGAAGGGACCTTGGCA...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCTCCAATGGCCTTTACAGCTaGCTCGGGCTCCTATGTCGT +
Preference number: 4 (lower is better)
Translates to: AEQTQLSPTEREQAVPCSNGLYS*LGLLCR
Trigger: ACGACATAGGAGCCCGAGTCAGCTGTAAAGGCCATT...GGAGCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTTCCCGTCTCATCTGTaGAGATGGAGTGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLFPSHL*RWSAPG
Trigger: CCCAGGTGCACTCCATCTGCACAGATGAGACGGGAA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCATACTGGTACGGGTCTaGCTTCCCTTGGTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLILVRV*LPLVWR
Trigger: ACGCCAGACCAAGGGAAGGCAGACCCGTACCAGTAT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGTGTCTGAGTGGCCATaGCGGTCGGGGTCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELVSEWP*RSGSFR
Trigger: TCTGAAGGACCCCGACCGGCATGGCCACTCAGACAC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTGGGAAGCACTGGGGGTaGTGGGAGCGCACCATGCCC +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLGKHWG*WERTMP
Trigger: GGGCATGGTGCGCTCCCAGCACCCCCAGTGCTTCCC...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGTCTTCTCCTCTGAACTaGAGCCACAGGCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRSSPLN*SHRPLG
Trigger: CCCAAGGGGCCTGTGGCTGCAGTTCAGAGGAGAAGA...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACCTGGCAGCCCAGAGCTaGTTCTGGGTTAGGACAACA +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADLAAQS*FWVRTT
Trigger: TGTTGTCCTAACCCAGAAGCAGCTCTGGGCTGCCAG...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCACCAGGGGGCAGGCATTaGTTCCTCCCTAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARAPGGRH*FLPSVN
Trigger: GTTCACACTAGGGAGGAAGCAATGCCTGCCCCCTGG...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGAGGCCCACAACACCCTaGACAGAGGCCTTTGACCCT +
Preference number: 4 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQRPTTP*TEAFDP
Trigger: AGGGTCAAAGGCCTCTGTGCAGGGTGTTGTGGGCCT...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACCTTCCACAAGTGCAATaGCAGATGATGGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADLPQVQ*QMMGRG
Trigger: GCCCCTGCCCATCATCTGGCATTGCACTTGTGGAAG...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCCAGCAACCACTGGAATaGGGTTTAGGAGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASQQPLE*GLGAPE
Trigger: TTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGCCCAGAGCTGCTTCTaGGTTAGGACAACAAATAGG +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASAQSCF*VRTTNR
Trigger: CCTATTTGTTGTCCTAACCCAGAAGCAGCTCTGGGC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCGAACAGGGACTGACATaGCTGAGGTCTACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVEQGLT*LRSTLE
Trigger: CTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTC...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGAGACCACTGTGTTGCTaGTGTGGGGAGGCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELRPLCC*CGEARL
Trigger: GAGCCTCGCCTCCCCACACCAGCAACACAGTGGTCT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGCTGCTGGGGTGTGGGTaGACAGCAGCGTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRLLGCG*TAAWRN
Trigger: GTTCCTCCACGCTGCTGTCCACCCACACCCCAGCAG...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATAGGACTGCTGGGGTGTaGGTGGACAGCAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHRTAGV*VDSSVE
Trigger: CTCCACGCTGCTGTCCACCCACACCCCAGCAGTCCT...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp GCTCGGTCGGGCTTGATGCTGCAGCATTTGGGGCACTaGTACACCACCTGCCCAGGCTTCAACTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: ARSGLMLQHLGH*YTTCPGFNCKL
Trigger: GAGTTTACAGTTGAAGCCTGGGCAGGTGGTGTACAAGTGCCCCAAATGCTGCAGCATCAAGCCCGACCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419642.1
CDS-3UTR TCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTGTGTGGACTTGTGTCTaGGTGGCCATGCCGGTCGGG +
Preference number: 4 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPVWTCV*VAMPVG
Trigger: CCCGACCGGCATGGCCACTCAGACACAAGTCCACAC...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTCTGGGGATCTCTGGCTaGCACGGTCTGGAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPLGISG*HGLEKG
Trigger: CCCCTTCTCCAGACCGTGTCAGCCAGAGATCCCCAG...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAGCTGTCTCGCTCAGTaGAGACTCCAGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRSCLAQ*RLQCLW
Trigger: CCACAGACACTGGAGTCTTCACTGAGCGAGACAGCT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTAGGGGCATGCTCTGCTaGGTGCCTGTGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPRGMLC*VPVLLP
Trigger: TGGCAGGAGCACAGGCACTCAGCAGAGCATGCCCCT...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTAGTGGGCCTGCAGCCTaGGTGTGGGAGGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPSGPAA*VWEAQC
Trigger: ACATTGGGCCTCCCACACTCAGGCTGCAGGCCCACT...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACGGCACAAGAATCACTTaGGCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADGTRIT*AQEFKA
Trigger: AGCCTTGAACTCCTGGGCTCAAGTGATTCTTGTGCC...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCACCAGGTCAGTCTGGGTaGCACATGAGCTGTGATCTG +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARAPGQSG*HMSCDL
Trigger: CAGATCACAGCTCATGTGTCACCCAGACTGACCTGG...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACAGGCTGATGAGTGGCTaGGGCATAAGGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNRLMSG*GIRGTT
Trigger: TGTGGTCCCCCTTATGCCTCAGCCACTCATCAGCCT...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGTGCCAGCTCCCCATGTaGTCCCTGGGCTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELCQLPM*SLGWFF
Trigger: AAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCA...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGACAGCGATGTCACCTaGCGCACCATGTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLDSDVT*RTMSLS
Trigger: TGACAAAGACATGGTGCGGCAGGTGACATCGCTGTC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCCTTATTCTAACTGCTaGCCCCTAGGAGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLPYSNC*PLGDSR
Trigger: CCTGGAGTCTCCTAGGGGGCAGCAGTTAGAATAAGG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGGACACCAGAAGCTCTTaGAGGGTGTGTGATGGGCCT +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKDTRSS*RVCDGP
Trigger: AGGCCCATCACACACCCTGCAAGAGCTTCTGGTGTC...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACCATGTGATGCCATGCTaGTTCCTGACTGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHHVMPC*FLTGPS
Trigger: CGAGGGGCCAGTCAGGAAGCAGCATGGCATCACATG...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGCTCGGGCTTCGGCGATaGCTCCTCGGAACGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVLGLRR*LLGTRR
Trigger: GCGCCTCGTTCCGAGGAGCCATCGCCGAAGCCCGAG...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCTATTCTGTCCATACTaGCATCGTGAAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLLFCPY*HREAGG
Trigger: GCCTCCGGCTTCACGATGCCAGTATGGACAGAATAG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCAATCACTGTGGTGGGTaGAGAGAAGGAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLNHCGG*REGAAL
Trigger: GAGTGCAGCTCCTTCTCTCCACCCACCACAGTGATT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296127.7
CDS-3UTR CCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGGGGACGGTAGTGCTGTaGTGTGGACTTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQGTVVL*CGLVSE
Trigger: CTCAGACACAAGTCCACACCACAGCACTACCGTCCC...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCACTCAGTTAGTAGAATaGGCACAGCGCGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLTQLVE*AQRETA
Trigger: CGCTGTCTCGCGCTGTGCCCATTCTACTAACTGAGT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCAAAGGAAAGAGGCCTaGTGGGGCAAGCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLQRKEA*WGKLVQ
Trigger: TTGAACCAGCTTGCCCCACCAGGCCTCTTTCCTTTG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGATGTGCTCCCTGGGCTaGTTCTTTCGTTTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKMCSLG*FFRLRR
Trigger: GCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACAT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAAGAAGGAGGGGAAATaGCAAGGCCAAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRKKEGK*QGQASG
Trigger: GCCACTCGCTTGGCCTTGCCATTTCCCCTCCTTCTT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGCACAGGCAGGGTTTATaGTCAGTTCTACCTACATGT +
Preference number: 4 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGHRQGL*SVLPTC
Trigger: ACATGTAGGTAGAACTGACCATAAACCCTGCCTGTG...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAGGGCAGACTCATCCTaGTGGGGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRRADSS*WGVCVC
Trigger: ACACACACACACACCCCACCAGGATGAGTCTGCCCT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TGTGCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCGAACAGGGACTGACATaGCTGAGGTCTACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CAEQTQLSPTEREQAVPCEQGLT*LRSTLE
Trigger: CTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTC...GCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAGGGCACCTTCTAGGTaGGGCGCCTTCCCCTCTACT +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRRAPSR*GAFPST
Trigger: AGTAGAGGGGAAGGCGCCCCACCTAGAAGGTGCCCT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGCAACTCACCTGCCTCTaGGTGTCGGCTGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELQLTCL*VSAATQ
Trigger: CTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTG...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp TTTCTGCCCCTGGGATGCCCTGTTCAAAAGCTCCCTTaGCTGGGCGGAGAATGTGAAAGCCACCCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: FLPLGCPVQKLP*LGGECESHPVL
Trigger: CAAGACTGGGTGGCTTTCACATTCTCCGCCCAGCAAAGGGAGCTTTTGAACAGGGCATCCCAGGGGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAACATTGTTTCGGTGTCTaGCAGCGATGTCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKHCFGV*QRCHLP
Trigger: CGGCAGGTGACATCGCTGTCAGACACCGAAACAATG...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTATGCAGGGTCCTCTTTaGACCATGCCTGGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSMQGPL*TMPGPC
Trigger: GCAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCAT...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGCCTTTCTCAGCATCCTaGGGCTGCACCTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELPFSAS*GCTSKH
Trigger: GTGTTTGGAGGTGCAGCCTCAGGATGCTGAGAAAGG...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCCAGAATGTTATGCTGTaGATGGTCACCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASQNVML*MVTTER
Trigger: TCTCTCTGTGGTGACCATTCACAGCATAACATTCTG...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGGAGGGATGTCCACAGTaGGAAGTGTCCGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVEGCPQ*EVSAPG
Trigger: GCCGGGCGCGGACACTTCTCACTGTGGACATCCCTC...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGCCTCAGGGAGCAGCCTATGCAAATGTGTCTCTTCATAGCGGGCCAGATAACCAGAACAGACTCAGCTaGGCCCCACAGAACGAGAAC +
Preference number: 4 (lower is better)
Translates to: EPQGAAYANVSLHSGPDNQNRLS*APQNEN
Trigger: GTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTG...GTTATCTGGCCCGCTATGAAGAGACACATTTGCATAGGCTGCTCCCTGAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGGACAGCGATGTCACCTaGCGCACCATGTCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKDSDVT*RTMSLS
Trigger: TGACAAAGACATGGTGCGGCAGGTGACATCGCTGTC...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTCCCCAAGGCAAGCCCTaGCCGGTCCTTCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPPQGKP*PVLLSQ
Trigger: TTGTGACAGAAGGACCGGGCAGGGCTTGCCTTGGGG...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGCTCTGGCAGGATCGTTaGCCTTCACAGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQLWQDR*PSQSVQ
Trigger: TTGGACACTCTGTGAAGGGCAACGATCCTGCCAGAG...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTCCAGGGGGCAGGCATTaGTTCCTCCCTAGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSPGGRH*FLPSVN
Trigger: GTTCACACTAGGGAGGAAGCAATGCCTGCCCCCTGG...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGAGACCACTGTGTTaGTGGTGTGGGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPERPLC*WCGEAR
Trigger: CCTCGCCTCCCCACACCAGCAACACAGTGGTCTCTC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCGGTTTCCAGTTCTACTaGAAATCACCACTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVGFQFY*KSPLCP
Trigger: TGGGCACAGTGGTGATTTGCAGTAGAACTGGAAACC...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACACATTGCTTCAGCAGTaGTCCTGCCCCAAATGCCTA +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADTLLQQ*SCPKCL
Trigger: TAGGCATTTGGGGCAGGAGCACTGCTGAAGCAATGT...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGGCAACGAGGACACATTaGTTCAGCAGTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELATRTH*FSSAPA
Trigger: GGCAGGAGCACTGCTGAAGCAATGTGTCCTCGTTGC...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGCAGGGAAGAAACATTaGACGTACCACCTTCACCCA +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLAGKKH*TYHLHP
Trigger: TGGGTGAAGGTGGTACGTGCAATGTTTCTTCCCTGC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAATTTGCTGTGGGTTTaGTGGGCTTGGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRNLLWV*WAWALL
Trigger: GAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCACACACTTCTCTGGCTaGAGGTATTCTGGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLTHFSG*RYSGFR
Trigger: GCGGAAACCAGAATACCTCCAGCCAGAGAAGTGTGT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCACCATGTCTTTGTCACTaGGGATCTCTGGCTGACACG +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARAPCLCH*GSLADT
Trigger: CGTGTCAGCCAGAGATCCCCAGTGACAAAGACATGG...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGTCTTTGAACCATGCCTaGCCCTTGCAGGTAGATGTG +
Preference number: 4 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPESLNHA*PLQVDV
Trigger: CACATCTACCTGCAAGGGCCAGGCATGGTTCAAAGA...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGTGGCTCTGTCCATGCTaGACATGTCCTGCACATGTG +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKWLCPC*TCPAHV
Trigger: CACATGTGCAGGACATGTCCAGCATGGACAGAGCCA...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGTCAGACCTTCAGCAGTaGTCACAGACACCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKSDLQQ*SQTPQA
Trigger: AGCCTGTGGTGTCTGTGACCACTGCTGAAGGTCTGA...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTACTGTGTTGCTGGTGTaGGGAGGCGAGGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPTVLLV*GGEAQG
Trigger: ACCCTGAGCCTCGCCTCCCCACACCAGCAACACAGT...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTGGAAGGCAGTCTCAGTaGCTTCTCCGCGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLGRQSQ*LLRGGN
Trigger: GTTCCCTCCGCGGAGAAGCCACTGAGACTGCCTTCC...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTCCAGGCCTCCCTTCTTaGCACAGAAGCAGTGACCAG +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSPGLPS*HRSSDQ
Trigger: CTGGTCACTGCTTCTGTGCCAAGAAGGGAGGCCTGG...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGGGAACCAGACAGACCTaGTGGTTACAAAACATTGTG +
Preference number: 4 (lower is better)
Translates to: NSPASGCRLQLSHQATERGTRQT*WLQNIV
Trigger: CACAATGTTTTGTAACCACCAGGTCTGTCTGGTTCC...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCAAGGGAATTTGCTGTaGGTTTGCTGGGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKQGNLL*VCWAWA
Trigger: TGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTCAAGCAGGGCCCGCCTaGTGGACTGACGTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDAQAGPA*WTDVFS
Trigger: GGAGAACACGTCAGTCCACCAGGCGGGCCCTGCTTG...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTCCCTCAGAGGACTGCTaGGGTGTGGGTGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDAPSEDC*GVGGQQ
Trigger: CTGCTGTCCACCCACACCCCAGCAGTCCTCTGAGGG...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTGGGGTGTCCACGGCATaGGTAAGATGGGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSGVSTA*VRWGLS
Trigger: ACTCAGACCCCATCTTACCCATGCCGTGGACACCCC...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAAAGAACATCGTCAGCGTaGTGCTGGGCTGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKRTSSA*CWAVQL
Trigger: GAGCTGTACAGCCCAGCACCACGCTGACGATGTTCT...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp ACCATATGCCTCCTGATACGGTGCAACGAGGACACATaGCTTCAGCAGTGCTCCTGCCCCAAATGCCTAACC +
Preference number: 4 (lower is better)
Translates to: TICLLIRCNEDT*LQQCSCPKCLT
Trigger: GGTTAGGCATTTGGGGCAGGAGCACTGCTGAAGCAATGTGTCCTCGTTGCACCGTATCAGGAGGCATATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp AGTCCTCGTCCTTTGTCTCCTCTGATGGATCCTCCATaGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SPRPLSPLMDPP*FRCLTAMSPAA
Trigger: TGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGGAGGATCCATCAGAGGAGACAAAGGACGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTCCTTCAAACAAGACTaGCACAGGAAGTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLSFKQD*HRKCLS
Trigger: TGAGAGGCACTTCCTGTGTCAGTCTTGTTTGAAGGA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR TCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGCTGGGGATCTCTGGCTaGCACGGTCTGGAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVLGISG*HGLEKG
Trigger: CCCCTTCTCCAGACCGTGTCAGCCAGAGATCCCCAG...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TGTGCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCGTCCTTTGTCTCCTCTaGTGGATCCTCCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: CAEQTQLSPTEREQAVPCVLCLL*WILHCF
Trigger: GAAACAATGGAGGATCCATCAGAGGAGACAAAGGAC...GCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGAGGCTTCAAATGGGGTaGATAGAGGGCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKRLQMG*IEGRLI
Trigger: GATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTCCTTTCTCAGCATCCTaGGGCTGCACCTCCAAACAC +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSPFSAS*GCTSKH
Trigger: GTGTTTGGAGGTGCAGCCTCAGGATGCTGAGAAAGG...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTGAACACTGGGCCCTTTaGGCAATTAACCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVEHWAL*AINPRP
Trigger: GGGCCTGGGGTTAATTGCTCAAAGGGCCCAGTGTTC...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGTCTTACCCAAAGTGGTaGGCGTCAACTTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQSYPKW*ASTSCP
Trigger: TGGACAGGAAGTTGACGCTCACCACTTTGGGTAAGA...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCAAAGCCACATGGGTGTTaGAACCCACACGTAGAAAGC +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARAKPHGC*NPHVES
Trigger: GCTTTCTACGTGTGGGTTTCAACACCCATGTGGCTT...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGTCTCCTTTACTGACTaGCAGCTCCCCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSVSFTD*QLPMCS
Trigger: GGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGAC...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCCCCAAGGCAAGCCCTaGCCGGTCCTTCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLPQGKP*PVLLSQ
Trigger: TTGTGACAGAAGGACCGGGCAGGGCTTGCCTTGGGG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTTCTTCTCCTCTGAACTaGAGCCACAGGCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPSSPLN*SHRPLG
Trigger: CCCAAGGGGCCTGTGGCTGCAGTTCAGAGGAGAAGA...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCATTGCTTTGGGCATTCTaGATTCTCTTCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSLLWAF*ILFLGD
Trigger: ATCACCCAGGAAGAGAATGCAGAATGCCCAAAGCAA...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGGGGTTAAGGAAGGAGTaGAGGACACAAACAGCATGC +
Preference number: 4 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQGLRKE*RTQTAC
Trigger: GCATGCTGTTTGTGTCCTGCACTCCTTCCTTAACCC...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGGCTGGAGGTATTCTaGTTTCCGCTCAATGTTTCG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLWLEVF*FPLNVS
Trigger: CGAAACATTGAGCGGAAACCAGAATACCTCCAGCCA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGGGACACACTTCTCTaGCTGGAGGTATTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLWDTLL*LEVFWF
Trigger: AAACCAGAATACCTCCAGCCAGAGAAGTGTGTCCCA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCAGGACGAAGTACTTCTaGTTGTTCTCGCCTACACAG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLRTKYF*LFSPTQ
Trigger: CTGTGTAGGCGAGAACAACCAGAAGTACTTCGTCCT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAATCACTGTGGTGGGTaGAGAGAAGGAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRNHCGG*REGAAL
Trigger: AAGTGCAGCTCCTTCTCTCCACCCACCACAGTGATT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGAAGCACTGGGGGTGCTaGGAGCGCACCATGCCCATA +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLKHWGC*ERTMPI
Trigger: TATGGGCATGGTGCGCTCCCAGCACCCCCAGTGCTT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAAGAAGGAGGGGAAATaGCAAGGCCAAGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLKKEGK*QGQASG
Trigger: GCCACTCGCTTGGCCTTGCCATTTCCCCTCCTTCTT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCCCGACCCCCAGACCTaGCCCAACATGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLPDPQT*PNMERR
Trigger: TCTTCTCTCCATGTTGGGCCAGGTCTGGGGGTCGGG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGTCTTTGAACCATGCCTaGCCCTTGCAGGTAGATGTG +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRSLNHA*PLQVDV
Trigger: CACATCTACCTGCAAGGGCCAGGCATGGTTCAAAGA...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATGGCACGTGGAGGGAGTaGGTGGTGAATCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHGTWRE*VVNPLL
Trigger: AAGAAGTGGATTCACCACCCACTCCCTCCACGTGCC...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCACAGCCACAGGCCCCTTaGGGCCAGGACTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPQPQAP*GQDSCP
Trigger: AGGGCATGAGTCCTGGCCCCAAGGGGCCTGTGGCTG...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACATAGTTGGAGAGCTCTaGCAAGGGTTAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHIVGEL*QGLGQR
Trigger: CCTCTGCCCTAACCCTTGCCAGAGCTCTCCAACTAT...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAACTCGTGGGTCATAGTTaGAGAGCTCTGGCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKLVGHS*RALARV
Trigger: AACCCTTGCCAGAGCTCTCCAACTATGACCCACGAG...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTCCATCACCCCTCTCGTaGGTCATAGTTGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLPSPLS*VIVGEL
Trigger: GAGCTCTCCAACTATGACCCACGAGAGGGGTGATGG...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGAATTGCCTTTGGGGCTaGTGTTGTACCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPENCLWG*CCTSAF
Trigger: GAAAGCAGAGGTACAACACCAGCCCCAAAGGCAATT...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGTGTGGAAGCCAGGCTaGGAACCAATCACTACCCTG +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSVWKPG*EPITTL
Trigger: CAGGGTAGTGATTGGTTCCCAGCCTGGCTTCCACAC...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCAAAAGAAGGTTCAGGTTaGGAGTACGCTGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARAKEGSG*EYAGQW
Trigger: CCACTGACCAGCGTACTCCCAACCTGAACCTTCTTT...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGTTGATGATTGGCAGATaGGGAAGAAACAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: NSPASGCRLQLSHQATERLMIGR*GRNRSS
Trigger: GGAACTTCTGTTTCTTCCCCATCTGCCAATCATCAA...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp GCACATGTGTGTGTAGAGCTTAATGCAGGGTCCTCTTaGAACCATGCCTGGCCCTTGCAGGTAGATGTGGCA +
Preference number: 4 (lower is better)
Translates to: AHVCVELNAGSS*NHAWPLQVDVA
Trigger: TGCCACATCTACCTGCAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCATTAAGCTCTACACACACATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CAA 72 bp CATCTCTTCTGGAAGCCAAGGGAATTTGCTGTGGGTTaGCTGGGCTTGGGCACTGCTCCTTCACATGACTCA +
Preference number: 4 (lower is better)
Translates to: HLFWKPREFAVG*LGLGTAPSHDS
Trigger: TGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCAGAAGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGGGCTCGGTCGGGCTTaGTGCTGCAGCATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLGLGRA*CCSIWG
Trigger: GCCCCAAATGCTGCAGCATCAAGCCCGACCGAGCCC...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCAAGAGACAGAGCAATaGAACAAACACCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLQETEQ*NKHPTR
Trigger: TCTGGTTGGGTGTTTGTTTCATTGCTCTGTCTCTTG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAAAGGTCTCCTTTACTaGCTGCCAGCTCCCCATGTG +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRKGLLY*LPAPHV
Trigger: CACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTTT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTAAAGGTCTCCTTTACTaGCTGCCAGCTCCCCATGTG +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSKGLLY*LPAPHV
Trigger: CACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTTT...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCAGACTCTTCTTAGATaGACTCTGAGAAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKQTLLR*TLRKPP
Trigger: TGGGGGCTTTCTCAGAGTTCATCTAAGAAGAGTCTG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGCAGAGGTGGCTTTGTaGACACTGGGCCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLAEVAL*TLGPLS
Trigger: GCTCAAAGGGCCCAGTGTTCACAAAGCCACCTCTGC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAATGGCCTTTACAGCTaGCTCGGGCTCCTATGTCGT +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRNGLYS*LGLLCR
Trigger: ACGACATAGGAGCCCGAGTCAGCTGTAAAGGCCATT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGACTTTCAGGGAGTGTTaGCTTTTGAGTCTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: NSPASGCRLQLSHQATERTFREC*LLSLER
Trigger: TCTTTCTAGACTCAAAAGTCAACACTCCCTGAAAGT...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTTGGCTGCATCCACACTaGCTTGGACTCAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLWLHPH*LGLKAM
Trigger: CATGGCTTTGAGTCCAAGTCAGTGTGGATGCAGCCA...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACTACAAACTGGTaGTCCCCTCCTAAATATTTT +
Preference number: 4 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSATTNW*SPPKYF
Trigger: AAAATATTTAGGAGGGGATCACCAGTTTGTAGTGGC...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCAGAGATTCCAGTCTCTaGCATTTCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLRDSSL*HFFPVQ
Trigger: CTGAACAGGGAAGAAATGGCAGAGACTGGAATCTCT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296127.7
CDS-3UTR GCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTTGCCAGCTCCCCATGTaGTCCCTGGGCTGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDACQLPM*SLGWFF
Trigger: AAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCA...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTAGTAGCTGGCAGCTCTaGAGTCTTTCCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSSSWQL*SLSRLV
Trigger: GACTAGCCTGGAAAGACTGCAGAGCTGCCAGCTACT...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGTCCTCTTTGAACCATaGCTGGCCCTTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLVLFEP*LALAGR
Trigger: TCTACCTGCAAGGGCCAGGCATGGTTCAAAGAGGAC...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTCTCTGGCTCTGTCCATaGTGGACATGTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSLWLCP*WTCPAH
Trigger: ATGTGCAGGACATGTCCAGCATGGACAGAGCCAGAG...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACGGGGCTCATTTTCGGTaGTACTGTCTTAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHGAHFR*YCLNSG
Trigger: GCCAGAGTTAAGACAGTAGCACCGAAAATGAGCCCC...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGGAGCACCAGAACGCTaGTCAGACCTTCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLGAPER*SDLQQW
Trigger: CCACTGCTGAAGGTCTGAGCAGCGTTCTGGTGCTCC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTGGAGCACCAGAACGCTaGTCAGACCTTCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLGAPER*SDLQQW
Trigger: CCACTGCTGAAGGTCTGAGCAGCGTTCTGGTGCTCC...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp AACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAGCCACCAGGCCACAGAAAGGACTTCCTGTCCAGATTaGAAGTTAATGGCCTTTACA +
Preference number: 4 (lower is better)
Translates to: NSPASGCRLQLSHQATERTSCPD*KLMAFT
Trigger: TGTAAAGGCCATTAACTTGCAATCTGGACAGGAAGT...CCTTTCTGTGGCCTGGTGGCTGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCACTGGTGTTGTACCTCTaGTTTCAGGCCAAGATGGAT +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARALVLYL*FQAKMD
Trigger: ATCCATCTTGGCCTGAAAGCAGAGGTACAACACCAG...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGCATTCCTGAGAAATaGCAGGGGAAAAGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLCIPEK*QGKRAN
Trigger: GTTAGCTCTTTTCCCCTGGCATTTCTCAGGAATGCA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTTCAGCACACCCCAACTaGACTATGCTGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLSAHPN*TMLSPA
Trigger: TGCTGGGCTCAGCATAGTGCAGTTGGGGTGTGCTGA...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTCGCGGAGGGAACACGTaGCTGTCTCACAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDARGGNT*LSHNQH
Trigger: GTGCTGATTGTGAGACAGGCACGTGTTCCCTCCGCG...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTGCAGCAGATCCACCCTaGAGCCTCTTCCAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDAAADPP*SLFQAV
Trigger: GACAGCTTGGAAGAGGCTGCAGGGTGGATCTGCTGC...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTCTATTCTGTCCATACTaGCATCGTGAAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSLFCPY*HREAGG
Trigger: GCCTCCGGCTTCACGATGCCAGTATGGACAGAATAG...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCAACTCAAGTAGATTGTaGATAGTCGGCCTCCCACTA +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLNSSRL*IVGLPL
Trigger: TAGTGGGAGGCCGACTATCCACAATCTACTTGAGTT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAAAGCCACCCAGTCTTaGAGAACGGTTCTTGATGAG +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRKATQS*RTVLDE
Trigger: CTCATCAAGAACCGTTCTCCAAGACTGGGTGGCTTT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGTTTCCAGGGAGTAGCTaGCAGCTCTGCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRFPGSS*QLCSLS
Trigger: GGAAAGACTGCAGAGCTGCCAGCTACTCCCTGGAAA...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTAGGGCAGACTCATCCTaGTGGGGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPRADSS*WGVCVC
Trigger: ACACACACACACACCCCACCAGGATGAGTCTGCCCT...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATATAGTTGGAGAGCTCTaGCAAGGGTTAGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHIVGEL*QGLGQR
Trigger: CCTCTGCCCTAACCCTTGCCAGAGCTCTCCAACTAT...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTAGCCTCCCAAGTAGCTaGGACTACAGACGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDASLPSS*DYRRLP
Trigger: TGGCAGGCGTCTGTAGTCCCAGCTACTTGGGAGGCT...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACCCTGCTAGCCCCAACTaGATTCTCAAACTTGATAGT +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADPASPN*ILKLDS
Trigger: ACTATCAAGTTTGAGAATCCAGTTGGGGCTAGCAGG...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTACCCAGGACAGGATTaGATAAACCTTAACTCCTAC +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLYPGQD*INLNSY
Trigger: GTAGGAGTTAAGGTTTATTCAATCCTGTCCTGGGTA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGTACCCAGGACAGGATTaGATAAACCTTAACTCCTAC +
Preference number: 4 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPEYPGQD*INLNSY
Trigger: GTAGGAGTTAAGGTTTATTCAATCCTGTCCTGGGTA...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGTCTGGAGAAGGGGTTaGACCAGTTCAGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPVWRRG*TSSGRS
Trigger: ACTTCTCCCTGAACTGGTTCAACCCCTTCTCCAGAC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCCATATCCACATCTGTaGATGGCTAGATATGTAGCC +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKPYPHL*MARYVA
Trigger: GGCTACATATCTAGCCATTCACAGATGTGGATATGG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGAGGGAGTGGGTGGTaGATCCACTTCTTATACCAA +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLGGSGW*IHFLYQ
Trigger: TTGGTATAAGAAGTGGATTCACCACCCACTCCCTCC...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTATGATCTCGATCTCTTaGCCTCGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDAMISIS*PRDLPA
Trigger: GGCGGGCAGATCACGAGGTCAAGAGATCGAGATCAT...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTTTATGGCCTCCTTGTaGGGAGGTGGGTATGAGTAT +
Preference number: 4 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHFMASL*GGGYEY
Trigger: ATACTCATACCCACCTCCTCACAAGGAGGCCATAAA...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTGAAGCAGTGACCAGCTaGGATGGTTTGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPEAVTS*DGLLWA
Trigger: TGCCCAAAGCAAACCATCTCAGCTGGTCACTGCTTC...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTCCTTCATGTGGGTCATaGGCATGTGATGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPPSCGS*ACDAML
Trigger: CAGCATGGCATCACATGCTCATGACCCACATGAAGG...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTGGACCACACATCCTCTaGGGCCACTACAAACTGGTG +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDAGPHIL*GHYKLV
Trigger: CACCAGTTTGTAGTGGCCTCAGAGGATGTGTGGTCC...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGACCGCTTACAAACACTaGAGTGGTGGGCTCGGTCGG +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVTAYKH*SGGLGR
Trigger: CCGACCGAGCCCACCACTGCAGTGTTTGTAAGCGGT...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GAGGCTAAGGCAGGAAAATTGCTGGAGGCCGGGCATTTGAGACTAGCTAGGGCATCAATTAAGTTCTCATaGGAGTGGTTAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: EAKAGKLLEAGHLRLARASIKFS*EWLGSP
Trigger: GGGACTCCCTAACCACTCGCATGAGAACTTAATTGA...TGCCCTAGCTAGTCTCAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGTTCTGTTGGGCTTTGTaGAGAAGATGCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELFCWAL*RRCCFS
Trigger: GCTGAAGCAGCATCTTCTGCACAAAGCCCAACAGAA...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAATGGGGCCAGGACTCATaGCCTTTTGCCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQWGQDS*PFAWSW
Trigger: CCAGCTCCAGGCAAAAGGGCATGAGTCCTGGCCCCA...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTCCTTATTCTAACTGCTaGCCCCTAGGAGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVPYSNC*PLGDSR
Trigger: CCTGGAGTCTCCTAGGGGGCAGCAGTTAGAATAAGG...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCAGAGAGACCACTGTGTTaGTGGTGTGGGGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPERPLC*WCGEAR
Trigger: CCTCGCCTCCCCACACCAGCAACACAGTGGTCTCTC...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGAAGAAAGAGGCAAATTaGACCCAATCTCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKKKEAN*TQSLSL
Trigger: CAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTACTTTCCCTTCCGGGCTaGTTCTTCACCCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FCILFLGDHLQPVEKEALLSLPG*FFTQRA
Trigger: GGCCCTTTGGGTGAAGAAGCAGCCCGGAAGGGAAAG...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGCCATTCATGTGGCATaGTCCCAGATAGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLAIHVA*SQIGTL
Trigger: AAGAGTGCCTATCTGGGAGCATGCCACATGAATGGC...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGTGGCTGGAGGTATTCTaGTTTCCGCTCAATGTTTCG +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELWLEVF*FPLNVS
Trigger: CGAAACATTGAGCGGAAACCAGAATACCTCCAGCCA...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTACACACTTCTCTGGCTaGAGGTATTCTGGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLTHFSG*RYSGFR
Trigger: GCGGAAACCAGAATACCTCCAGCCAGAGAAGTGTGT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCTGCCTTCCCTTGGTCTaGCGTGGCAAAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVCLPLV*RGKGAG
Trigger: GCCAGCCCCTTTGCCACGCCAGACCAAGGGAAGGCA...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAAAAGCTCCCTTTGCTaGGCGGAGAATGTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRKSSLC*AENVKA
Trigger: GGCTTTCACATTCTCCGCCCAGCAAAGGGAGCTTTT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAAAAGCTCCCTTTGCTaGGCGGAGAATGTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLKSSLC*AENVKA
Trigger: GGCTTTCACATTCTCCGCCCAGCAAAGGGAGCTTTT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCCATCACCCCTCTCGTaGGTCATAGTTGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLPSPLS*VIVGEL
Trigger: GAGCTCTCCAACTATGACCCACGAGAGGGGTGATGG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGATGTTATGCTGTGAATaGTCACCACAGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQMLCCE*SPQRDH
Trigger: GTGGTCTCTCTGTGGTGACCATTCACAGCATAACAT...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGTCTTCTGAGAGCAACTaGTTTGAGAGCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPESSESN*FESSET
Trigger: TGTTTCTGAGCTCTCAAACCAGTTGCTCTCAGAAGA...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAATGAGTATTGATGATTaGCAGATGGGGAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSMSIDD*QMGKKQ
Trigger: CTGTTTCTTCCCCATCTGCCAATCATCAATACTCAT...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTTTGCTGTGGGTTTGCTaGGCTTGGGCACTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLLLWVC*AWALLL
Trigger: AAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAA...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTTTCTCCATCTCTTCTaGAAGCCAAGGGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLFLHLF*KPREFA
Trigger: AGCAAATTCCCTTGGCTTCCAGAAGAGATGGAGAAA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp TCATCAGTTGTAGAGAGACGGTCTCTGGCAGGATCGTaGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SSVVERRSLAGS*PFTECPKMLSK
Trigger: CTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACGATCCTGCCAGAGACCGTCTCTCTACAACTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
3UTR CAA 72 bp GGGGGACTCCTGCTAGCCCCAACTGGATTCTCAAACTaGATAGTCAGAATCACCTGGAGGGCTGTTAAGACA +
Preference number: 4 (lower is better)
Translates to: GGLLLAPTGFSN*IVRITWRAVKT
Trigger: TGTCTTAACAGCCCTCCAGGTGATTCTGACTATCAAGTTTGAGAATCCAGTTGGGGCTAGCAGGAGTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp TGGAAGCCAAGGGAATTTGCTGTGGGTTTGCTGGGCTaGGGCACTGCTCCTTCACATGACTCAAGAAAGATC +
Preference number: 4 (lower is better)
Translates to: WKPREFAVGLLG*GTAPSHDSRKI
Trigger: GATCTTTCTTGAGTCATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTGTCTGGAGAAGGGGTTaGACCAGTTCAGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLVWRRG*TSSGRS
Trigger: ACTTCTCCCTGAACTGGTTCAACCCCTTCTCCAGAC...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGCATTGTTTCGGTGTCTaGCAGCGATGTCACCTGCCG +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVHCFGV*QRCHLP
Trigger: CGGCAGGTGACATCGCTGTCAGACACCGAAACAATG...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTGCCAAAACCCCAGGATaGAGGTTGACAGCACTTTTT +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSAKTPG*RLTALF
Trigger: AAAAAGTGCTGTCAACCTTCATCCTGGGGTTTTGGC...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGCCAAAACCCCAGGATaGAGGTTGACAGCACTTTTT +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSAKTPG*RLTALF
Trigger: AAAAAGTGCTGTCAACCTTCATCCTGGGGTTTTGGC...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTCAGACTCTTCTTAGATaGACTCTGAGAAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLQTLLR*TLRKPP
Trigger: TGGGGGCTTTCTCAGAGTTCATCTAAGAAGAGTCTG...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTAGGCTTCAAATGGGGTaGATAGAGGGCAGACTCATC +
Preference number: 4 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVRLQMG*IEGRLI
Trigger: GATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCT...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGGAGGGAGTGGGTGGTaGATCCACTTCTTATACCAA +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPGGSGW*IHFLYQ
Trigger: TTGGTATAAGAAGTGGATTCACCACCCACTCCCTCC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTCCTAGAAGAGGAGTTTaGAGCCCAATGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVPRRGV*SPMCKD
Trigger: GTCCTTGCACATTGGGCTTCAAACTCCTCTTCTAGG...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGCCAGAGCAACCAATCTaGAAACAGAATTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELPEQPI*KQNCLW
Trigger: CCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTGG...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGCAGAATGTTATGCTGTaGATGGTCACCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELQNVML*MVTTER
Trigger: TCTCTCTGTGGTGACCATTCACAGCATAACATTCTG...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTACGAACAAAAATGGTTaGTGCCTGGTAAGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSTNKNG*CLVRGS
Trigger: TGACCCCCTTACCAGGCATCAACCATTTTTGTTCGT...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAGCAGGGAGAAGGGGATaGAGAACATCGTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQAGRRG*RTSSAW
Trigger: CCACGCTGACGATGTTCTTCATCCCCTTCTCCCTGC...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGTCCTCTTTGAACCATaGCTGGCCCTTGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLVLFEP*LALAGR
Trigger: TCTACCTGCAAGGGCCAGGCATGGTTCAAAGAGGAC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTTTCTGTTGGGCTTTGTaGAGAAGATGCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLFCWAL*RRCCFS
Trigger: GCTGAAGCAGCATCTTCTGCACAAAGCCCAACAGAA...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGCAGAGTGTCCAAAGATaGTGTCCAAGAACCAGGATG +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRQSVQR*CPRTRM
Trigger: CATCCTGGTTCTTGGACAGCATCTTTGGACACTCTG...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTCTGGTGTTGTACCTCTaGTTTCAGGCCAAGATGGAT +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSLVLYL*FQAKMD
Trigger: ATCCATCTTGGCCTGAAAGCAGAGGTACAACACCAG...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGGAAGGAAGAGTCTGTaGAGAACAGACTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPGRKSL*RTDSAE
Trigger: CTCAGCTGAGTCTGTTCTGCACAGACTCTTCCTTCC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAGAGCATGTGATGCCATaGTGCTTCCTGACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQEHVMP*CFLTGP
Trigger: GGGGCCAGTCAGGAAGCAGCATGGCATCACATGCTC...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATTGGGACACACTTCTCTaGCTGGAGGTATTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHWDTLL*LEVFWF
Trigger: AAACCAGAATACCTCCAGCCAGAGAAGTGTGTCCCA...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAGGACGAAGTACTTCTaGTTGTTCTCGCCTACACAG +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRRTKYF*LFSPTQ
Trigger: CTGTGTAGGCGAGAACAACCAGAAGTACTTCGTCCT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGTACGTGCACATTTATaGGGGTTAACTATCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLVRAHL*GLTIRK
Trigger: CTTTCTGATAGTTAACCCCCATAAATGTGCACGTAC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGAACTCAAGTAGATTGTaGATAGTCGGCCTCCCACTA +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELNSSRL*IVGLPL
Trigger: TAGTGGGAGGCCGACTATCCACAATCTACTTGAGTT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGAGACCTGGCCCAACATaGAGAGAAGAAGGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLRPGPT*REEGGE
Trigger: TTCCCCTCCTTCTTCTCTCCATGTTGGGCCAGGTCT...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAAAGCCACCCAGTCTTaGAGAACGGTTCTTGATGAG +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRKATQS*RTVLDE
Trigger: CTCATCAAGAACCGTTCTCCAAGACTGGGTGGCTTT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTTCAATCAGCAGACCCTaGCCATCACCCATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSSISRP*PSPIFS
Trigger: TGAAAAGATGGGTGATGGCCAGGGTCTGCTGATTGA...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGCCCAGAGCTGCTTCTaGGTTAGGACAACAAATAGG +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPAQSCF*VRTTNR
Trigger: CCTATTTGTTGTCCTAACCCAGAAGCAGCTCTGGGC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATAATTGCCTTTGGGGCTaGTGTTGTACCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHNCLWG*CCTSAF
Trigger: GAAAGCAGAGGTACAACACCAGCCCCAAAGGCAATT...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGAAACAGAATTGCCTTTaGGGCTGGTGTTGTACCTCT +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELKQNCL*GWCCTS
Trigger: AGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCTTGTCCTCACTCCTTaGATCAGCTTCATCGGCTCC +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLLVLTP*ISFIGS
Trigger: GGAGCCGATGAAGCTGATCCAAGGAGTGAGGACAAG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAAGAGAACGAACAAAAATaGTTGATGCCTGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKENEQK*LMPGKG
Trigger: CCCCTTACCAGGCATCAACCATTTTTGTTCGTTCTC...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGCTGAGTGGTTACTTTTaGGGATGGAATTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRLSGYF*GWNSRG
Trigger: TCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAG...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp GTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTaGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VSKDAVQEPGCC*ALFFLTVASFL
Trigger: AAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGAACACTGGGCCCTTTaGGCAATTAACCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLEHWAL*AINPRP
Trigger: GGGCCTGGGGTTAATTGCTCAAAGGGCCCAGTGTTC...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTTCACTACCCTGCAAATaGTGGCTACATTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPSLPCK*WLHSSV
Trigger: GACTGAGGAATGTAGCCATCATTTGCAGGGTAGTGA...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTGCCAAAAGTTGGGGCTaGCTTTGTGTAGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSAKSWG*LCVERC
Trigger: ACATCTTTCTACACAAAGTCAGCCCCAACTTTTGGC...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATATGAGCTGTGATCTGTaGACAAACTCACCAACACTC +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHMSCDL*TNSPTL
Trigger: GAGTGTTGGTGAGTTTGTTCACAGATCACAGCTCAT...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATCAAGAGCCCACAGGATaGTTATTTGCCATTCATGTG +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHQEPTG*LFAIHV
Trigger: CACATGAATGGCAAATAATCATCCTGTGGGCTCTTG...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTGTGAGGAGGTGGGTATaGGTATTGATGATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLVRRWV*VLMIGR
Trigger: TCTGCCAATCATCAATACTCATACCCACCTCCTCAC...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTTGCCATGCTGCTTCCTaGCTGGCCCCTCGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFCHAAS*LAPRQA
Trigger: GGCCTGGCGAGGGGCCAGTCAGGAAGCAGCATGGCA...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR TCA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCATGCAAAGCTGGAAATaGGAAATGCCCAATAATGAT +
Preference number: 4 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLMQSWK*EMPNND
Trigger: ATCATTATTGGGCATTTCTCATTTCCAGCTTTGCAT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACATCAAAAACACAATCTaGAGGACAGCCTACAGAATA +
Preference number: 4 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADIKNTI*RTAYRI
Trigger: TATTCTGTAGGCTGTCCTTCAGATTGTGTTTTTGAT...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGCACTTTTTAGTGTTTaGTTCTCTCCCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPALFSV*FSPHSS
Trigger: GCTGCTGTGGGGAGAGAAGCAAACACTAAAAAGTGC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTGATGAGCCGTCTCAGTaGAGACTCTTCTTAGATGAA +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSDEPSQ*RLFLDE
Trigger: TTCATCTAAGAAGAGTCTGCACTGAGACGGCTCATC...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGAGTAGCTGGCAGCTCTaGAGTCTTTCCAGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVSSWQL*SLSRLV
Trigger: GACTAGCCTGGAAAGACTGCAGAGCTGCCAGCTACT...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTTCAATTAAGTTCTCATaGGAGTGGTTAGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLSIKFS*EWLGSP
Trigger: GGGACTCCCTAACCACTCGCATGAGAACTTAATTGA...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp AAGCACAGCTCCAACACAGCTAACATTTATAAAGCCATACCAGGGCCAGACGCTAATCACTGTGGTGGGTaGAGAGAAGGAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: KHSSNTANIYKAIPGPDANHCGG*REGAAL
Trigger: AAGTGCAGCTCCTTCTCTCCACCCACCACAGTGATT...AGCGTCTGGCCCTGGTATGGCTTTATAAATGTTAGCTGTGTTGGAGCTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATCCAATTTGGGAGAACTaGCCTTTTCAAACACACAGG +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHPIWEN*PFQTHR
Trigger: CCTGTGTGTTTGAAAAGGCCAGTTCTCCCAAATTGG...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTTCAATCAGCAGACCCTaGCCATCACCCATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVSISRP*PSPIFS
Trigger: TGAAAAGATGGGTGATGGCCAGGGTCTGCTGATTGA...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGCTCGTGGGTCATAGTTaGAGAGCTCTGGCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVLVGHS*RALARV
Trigger: AACCCTTGCCAGAGCTCTCCAACTATGACCCACGAG...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAAACAGAATTGCCTTTaGGGCTGGTGTTGTACCTCT +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRKQNCL*GWCCTS
Trigger: AGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGTAATCCCAGGACTTTaGGAGGCTAAGGCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CCLALFFLTVASFLSQHPVIPGL*EAKAGK
Trigger: TTTTCCTGCCTTAGCCTCCCAAAGTCCTGGGATTAC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTCAAGAAAAAGCCACATaGGTGTTGAAACCCACACGT +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSQEKAT*VLKPTR
Trigger: ACGTGTGGGTTTCAACACCCATGTGGCTTTTTCTTG...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTCCAGATAGGCACTCTTaGATTATACTCAACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSPDRHS*IILNLL
Trigger: GAGGAGGTTGAGTATAATCCAAGAGTGCCTATCTGG...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAAAGATGGGGTCTGAGTaGGCAGTCTGTTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQKMGSE*AVCCGP
Trigger: TGGGCCACAACAGACTGCCCACTCAGACCCCATCTT...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp GCCTTCCTTTCCAGAGCAACCAATCTGAAAACAGAATaGCCTTTGGGGCTGGTGTTGTACCTCTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: AFLSRATNLKTE*PLGLVLYLCFQ
Trigger: CTGAAAGCAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTGGAAAGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAATGTCCACTTGGGGGATaGGGTCGCTGTGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKCPLGG*GRCAKV
Trigger: GACCTTGGCACAGCGACCTCATCCCCCAAGTGGACA...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTCCCCAGGATGAAGGTTaGCAGCACTTTTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLPQDEG*QHFLVF
Trigger: AAACACTAAAAAGTGCTGTCAACCTTCATCCTGGGG...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGCCTAGAAGAGGAGTTTaGAGCCCAATGTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVPRRGV*SPMCKD
Trigger: GTCCTTGCACATTGGGCTTCAAACTCCTCTTCTAGG...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTTGGTTCAATTTCCCATaGGTGCACCAAACAGTACTA +
Preference number: 4 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSWFNFP*VHQTVL
Trigger: TAGTACTGTTTGGTGCACTCATGGGAAATTGAACCA...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAATGTGTTTTGTGTACATaGTATTACCAAGCCCATGCA +
Preference number: 4 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKCVLCT*YYQAHA
Trigger: TGCATGGGCTTGGTAATATCATGTACACAAAACACA...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGCATACAGACTTTCTTTaGTGTCTTGGCAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LSILRLHLQTLTFFSSELHTDFL*CLGSCL
Trigger: CAAACAACTGCCAAGACATCAAAGAAAGTCTGTATG...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATTTCAGCACTATCTACTaGATTCCTGAGAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHFSTIY*IPEKCQ
Trigger: CTGGCATTTCTCAGGAATGCAGTAGATAGTGCTGAA...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGATTCCTCAGTCATTGTaGTCTTGGCAAAATATCAGT +
Preference number: 4 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKIPQSL*SWQNIS
Trigger: ACTGATATTTTGCCAAGAGCACAATGACTGAGGAAT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAAGGACACAAACAGCATaGGAGGTGAAGAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQRTQTA*EVKKRV
Trigger: CACCCGCTTCTTCACCTCGCATGCTGTTTGTGTCCT...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAACTCAGTTAGTAGAATaGGCACAGCGCGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQTQLVE*AQRETA
Trigger: CGCTGTCTCGCGCTGTGCCCATTCTACTAACTGAGT...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCGGCACGTGGAGGGAGTaGGTGGTGAATCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVGTWRE*VVNPLL
Trigger: AAGAAGTGGATTCACCACCCACTCCCTCCACGTGCC...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTATGCTGCTTCCTGACTaGCCCCTCGCCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFMLLPD*PLARPP
Trigger: GGGAGGCCTGGCGAGGGGCCAGTCAGGAAGCAGCAT...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR TCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTATCCTTCAAACAAGACTaGCACAGGAAGTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FCILFLGDHLQPVEKEALSFKQD*HRKCLS
Trigger: TGAGAGGCACTTCCTGTGTCAGTCTTGTTTGAAGGA...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAGCTGGTTCTTTCGTTTaGGGCGCTCGATGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: KSFLFKERGKLHPISLPVAGSFV*GARCPS
Trigger: AGACGGGCATCGAGCGCCTCAAACGAAAGAACCAGC...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339420.7
CDS-3UTR TCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGCCCCAGGATGAAGGTTaGCAGCACTTTTTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLPQDEG*QHFLVF
Trigger: AAACACTAAAAAGTGCTGTCAACCTTCATCCTGGGG...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTATTCTTAGATGAACTCTaGGAAAGCCCCCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FCILFLGDHLQPVEKEALFLDEL*ESPHPP
Trigger: AGGAGGATGGGGGCTTTCTCAGAGTTCATCTAAGAA...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAGCTGGGCGGAGAATGTaGAAGCCACCCAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KSFLFKERGKLHPISLPVAGRRM*KPPSLG
Trigger: TCCAAGACTGGGTGGCTTTCACATTCTCCGCCCAGC...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCCATATCCACATCTGTaGATGGCTAGATATGTAGCC +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLPYPHL*MARYVA
Trigger: GGCTACATATCTAGCCATTCACAGATGTGGATATGG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATGATCTCATCTGGTTTTaGCATCAGTTGCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHDLIWF*HQLQCF
Trigger: AAAGCATTGCAACTGATGTCAAAACCAGATGAGATC...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTATTCTTTCTCTTCTATaGGGTGATCCTAAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSILSLL*GDPKPD
Trigger: ATCTGGCTTAGGATCACCTCATAGAAGAGAAAGAAT...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGGTGGAGAGAAGGAGCTaGACTTTGTCCAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLVERRS*TLSNLL
Trigger: AAGAAGATTGGACAAAGTGCAGCTCCTTCTCTCCAC...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGCTCTGGCTCTGTCCATaGTGGACATGTCCTGCACAT +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLLWLCP*WTCPAH
Trigger: ATGTGCAGGACATGTCCAGCATGGACAGAGCCAGAG...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGCTCTGGCAGGATCGTTaGCCTTCACAGAGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLLWQDR*PSQSVQ
Trigger: TTGGACACTCTGTGAAGGGCAACGATCCTGCCAGAG...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTACTTCCTGTCCAGATTaGAAGTTAATGGCCTTTACA +
Preference number: 4 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSTSCPD*KLMAFT
Trigger: TGTAAAGGCCATTAACTTGCAATCTGGACAGGAAGT...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCAAAATGGGCTGAGGGCTaGTTTTTCCTGGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPKWAEG*FFLVGL
Trigger: GAGTCCTACCAGGAAAAAGCAGCCCTCAGCCCATTT...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGAGGGTAGATAGGGGCTaGAAACACAGCAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLRVDRG*KHSRRT
Trigger: CGTCCTTCTGCTGTGTTTGCAGCCCCTATCTACCCT...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAACACACTTCTCTGGCTaGAGGTATTCTGGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQTHFSG*RYSGFR
Trigger: GCGGAAACCAGAATACCTCCAGCCAGAGAAGTGTGT...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGAGACCTGGCCCAACATaGAGAGAAGAAGGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLRPGPT*REEGGE
Trigger: TTCCCCTCCTTCTTCTCTCCATGTTGGGCCAGGTCT...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCACAGGCAGGGTTTATaGTCAGTTCTACCTACATGT +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLHRQGL*SVLPTC
Trigger: ACATGTAGGTAGAACTGACCATAAACCCTGCCTGTG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGCAGTCATTGTGCTCTTaGCAAAATATCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRQSLCS*QNISLN
Trigger: GTTCAGACTGATATTTTGCCAAGAGCACAATGACTG...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAAGCAAAAGCTAATACTTaGGGCTTTTTCAAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKAKANT*GFFKKY
Trigger: GTACTTCTTGAAAAAGCCCCAAGTATTAGCTTTTGC...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp ACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTaGTACCTCTGCTTTCAGGCCAAGATGGATTCCCTA +
Preference number: 4 (lower is better)
Translates to: TNLKTELPLGLV*YLCFQAKMDSL
Trigger: TAGGGAATCCATCTTGGCCTGAAAGCAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTGATCTCATCTGGTTTTaGCATCAGTTGCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVDLIWF*HQLQCF
Trigger: AAAGCATTGCAACTGATGTCAAAACCAGATGAGATC...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCAGTTCAAGGCTGCAGTaGGCTCTAATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVSSRLQ*ALIVPL
Trigger: CAGTGGCACAATTAGAGCTCACTGCAGCCTTGAACT...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTAGATGAGCCGTCTCAGTaGAGACTCTTCTTAGATGAA +
Preference number: 4 (lower is better)
Translates to: FCILFLGDHLQPVEKEALDEPSQ*RLFLDE
Trigger: TTCATCTAAGAAGAGTCTGCACTGAGACGGCTCATC...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGGGGCTCATTTTCGGTaGTACTGTCTTAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLGAHFR*YCLNSG
Trigger: GCCAGAGTTAAGACAGTAGCACCGAAAATGAGCCCC...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCCAAGAAAGTGGGCCTaGAGCCTGAGTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFPRKWA*SLSVGG
Trigger: GCCTCCCACACTCAGGCTGCAGGCCCACTTTCTTGG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAAGATAAGCATAGTATaGACAGCTTTAAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLKISIV*TALKEE
Trigger: CTCCTCCTTTAAAGCTGTGCATACTATGCTTATCTT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAGAGCAACCAATCTGAAAACAGAATTGCCTTTGGGGCTGGTGTTGTACCTCTGCACAGGATGATTATTTaGCATTCATGTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: QSNQSENRIAFGAGVVPLHRMII*HSCGML
Trigger: GAGCATGCCACATGAATGGCAAATAATCATCCTGTG...CAGAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATTGGTTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTCAAACCGTGTCCACTTaGGGGATGAGGTCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSQTVST*GMRSLC
Trigger: GCACAGCGACCTCATCCCCCAAGTGGACACGGTTTG...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTAGACCACTGTGTTGCTaGTGTGGGGAGGCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFRPLCC*CGEARL
Trigger: GAGCCTCGCCTCCCCACACCAGCAACACAGTGGTCT...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCTCTGCATTCTCTTCCTaGGTGATCATCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVSAFSS*VIICSL
Trigger: CAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGA...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTTTGATGAAAAGATTTTaGAACCAGACAGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLLMKRF*NQTDLV
Trigger: CACCAGGTCTGTCTGGTTCCAAAATCTTTTCATCAA...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGTTCTTAGATGAACTCTaGGAAAGCCCCCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLFLDEL*ESPHPP
Trigger: AGGAGGATGGGGGCTTTCTCAGAGTTCATCTAAGAA...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCAGTGGCCTAGCCAGATaGGCAAAAGCTAATACTTGG +
Preference number: 4 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVSGLAR*AKANTW
Trigger: CCAAGTATTAGCTTTTGCTCATCTGGCTAGGCCACT...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTGTCTCCTTTACTGACTaGCAGCTCCCCATGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSVSFTD*QLPMCS
Trigger: GGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGAC...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCATGTGATGCCATGCTaGTTCCTGACTGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFHVMPC*FLTGPS
Trigger: CGAGGGGCCAGTCAGGAAGCAGCATGGCATCACATG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTGAGCATGTGATGCCATaGTGCTTCCTGACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFEHVMP*CFLTGP
Trigger: GGGGCCAGTCAGGAAGCAGCATGGCATCACATGCTC...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCAGCCGTCTCATCTGTaGAGATGGAGTGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFQPSHL*RWSAPG
Trigger: CCCAGGTGCACTCCATCTGCACAGATGAGACGGCTG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443879.2
CDS-3UTR CCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTACTATTCTGTCCATACTaGCATCGTGAAGCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: KSFLFKERGKLHPISLPVLFCPY*HREAGG
Trigger: GCCTCCGGCTTCACGATGCCAGTATGGACAGAATAG...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTATGTGCTCCCTGGGCTaGTTCTTTCGTTTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSMCSLG*FFRLRR
Trigger: GCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACAT...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCAGGCTCTGAAAGACTGTaGCTACGACTGGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPGSERL*LRLVQF
Trigger: AAATTGAACCAGTCGTAGCCACAGTCTTTCAGAGCC...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGGGTCACCAGACTATATaGCCTCAGCTGCAGAAATTC +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLGHQTI*PQLQKF
Trigger: GAATTTCTGCAGCTGAGGCCATATAGTCTGGTGACC...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAATTCCAGACAGAGCCTaGCCTGTCTACCAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKIPDRA*PVYQRS
Trigger: AGACCTCTGGTAGACAGGCCAGGCTCTGTCTGGAAT...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCCAGGCCTCCCTTCTTaGCACAGAAGCAGTGACCAG +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFPGLPS*HRSSDQ
Trigger: CTGGTCACTGCTTCTGTGCCAAGAAGGGAGGCCTGG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCCACAGAAAGGGTGTTaGGGTGGGGAGATGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFPQKGC*GGEMPR
Trigger: TCTGGGCATCTCCCCACCCCAACACCCTTTCTGTGG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTTTGGCACAGAAGCAGTaGCCAGCTGAGATGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSLAQKQ*PAEMVC
Trigger: GCAAACCATCTCAGCTGGTCACTGCTTCTGTGCCAA...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTTTCCCGTCTCATCTGTaGAGATGGAGTGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFFPSHL*RWSAPG
Trigger: CCCAGGTGCACTCCATCTGCACAGATGAGACGGGAA...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTATACTGGTACGGGTCTaGCTTCCCTTGGTCTGGCGT +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFILVRV*LPLVWR
Trigger: ACGCCAGACCAAGGGAAGGCAGACCCGTACCAGTAT...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAATGGGGACCGAGAATGTaGATTTCTAACAAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQWGPRM*ISNKFS
Trigger: TGAGAACTTGTTAGAAATGCACATTCTCGGTCCCCA...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAGAACAGGCTGTTCCCTaGTCCCTGTATCATCAGATG +
Preference number: 4 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKEQAVP*SLYHQM
Trigger: CATCTGATGATACAGGGAGCAGGGAACAGCCTGTTC...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAGAAGCCAAGGGAATTTaGTGTGGGTTTGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KSFLFKERGKLHPISLPVEAKGI*CGFAGL
Trigger: AAGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTC...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TTCTGCATTCTCTTCCTGGGTGATCATCTGCAGCCTGTTGAGAAAGAGGCTTTAGTACGTGCACATTTATaGGGGTTAACTATCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FCILFLGDHLQPVEKEALVRAHL*GLTIRK
Trigger: CTTTCTGATAGTTAACCCCCATAAATGTGCACGTAC...TAAAGCCTCTTTCTCAACAGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTCCATGTCTTTGTCACTaGGGATCTCTGGCTGACACG +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSPCLCH*GSLADT
Trigger: CGTGTCAGCCAGAGATCCCCAGTGACAAAGACATGG...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTGGTTACTTTTGGGGATaGAATTCTAGAGGATTTGTA +
Preference number: 4 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLGYFWG*NSRGFV
Trigger: TACAAATCCTCTAGAATTCCATCCCCAAAAGTAACC...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
3UTR CAA 72 bp CTGAGGCTTAAAGAAGTTACTGCTCAAGGTCATATTTaGGTAGTAGGTGCGGTAATAAGTAGCCAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LRLKEVTAQGHI*VVGAVISSQAD
Trigger: GTCTGCTTGGCTACTTATTACCGCACCTACTACCAAAATATGACCTTGAGCAGTAACTTCTTTAAGCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAGTCCTTTGTCTCCTCTaGTGGATCCTCCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: KSFLFKERGKLHPISLPVVLCLL*WILHCF
Trigger: GAAACAATGGAGGATCCATCAGAGGAGACAAAGGAC...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR TCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCATTTCAACCAAAGACTaGAGCCAGGACCCAAATACT +
Preference number: 4 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVISTKD*SQDPNT
Trigger: AGTATTTGGGTCCTGGCTTCAGTCTTTGGTTGAAAT...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTGGAAACACCCAAAAATaGCAGACTGGCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSGNTQK*QTGCIH
Trigger: GTGGATGCAGCCAGTCTGTCATTTTTGGGTGTTTCC...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTGAAGCAGTGACCAGCTaGGATGGTTTGCTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFEAVTS*DGLLWA
Trigger: TGCCCAAAGCAAACCATCTCAGCTGGTCACTGCTTC...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTTTGGCACAGAAGCAGTaGCCAGCTGAGATGGTTTGC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFLAQKQ*PAEMVC
Trigger: GCAAACCATCTCAGCTGGTCACTGCTTCTGTGCCAA...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCCTTCATGTGGGTCATaGGCATGTGATGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFPSCGS*ACDAML
Trigger: CAGCATGGCATCACATGCTCATGACCCACATGAAGG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR TCA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCGAAAATGGATCTTGTTaGCACAAGTCTAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVENGSC*HKSKGT
Trigger: GGTCCCTTTAGACTTGTGTCAACAAGATCCATTTTC...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCATTCTCTTCCTGGGTaGTCATCTGCAGCCGTCTCA +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFHSLPG*SSAAVS
Trigger: TGAGACGGCTGCAGATGATCACCCAGGAAGAGAATG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443879.2
CDS-3UTR CCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAAGTGACCAGCTGAGATaGTTTGCTTTGGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKSDQLR*FALGIL
Trigger: CAGAATGCCCAAAGCAAACCATCTCAGCTGGTCACT...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTGCTGGTTGCAAACCATaGATGGCTGTGACCAATGGT +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFAGCKP*MAVTNG
Trigger: ACCATTGGTCACAGCCATTCATGGTTTGCAACCAGC...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTGCACTTTTTAGTGTTTaGTTCTCTCCCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSALFSV*FSPHSS
Trigger: GCTGCTGTGGGGAGAGAAGCAAACACTAAAAAGTGC...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR GCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAACTACGGCAATCACACTaGTCAAGTCAGCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKLRQSH*SSQQDV
Trigger: AACATCTTGCTGACTTGAGCAGTGTGATTGCCGTAG...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTTGCTCGTACAGCAAGTaGCAACATGCATTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFCSYSK*QHALGS
Trigger: GCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCA...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTTGGGACACACTTCTCTaGCTGGAGGTATTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSWDTLL*LEVFWF
Trigger: AAACCAGAATACCTCCAGCCAGAGAAGTGTGTCCCA...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAATGTTATGCTGTGAATaGTCACCACAGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: KSFLFKERGKLHPISLPVMLCCE*SPQRDH
Trigger: GTGGTCTCTCTGTGGTGACCATTCACAGCATAACAT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTTCTGCATTCTCTTCCTaGGTGATCATCTGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFSAFSS*VIICSR
Trigger: ACGGCTGCAGATGATCACCCAGGAAGAGAATGCAGA...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443879.2
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCACCTAAACGGTTTCTaGATTAGGGGACGGTGGATT +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFHLNGF*IRGRWI
Trigger: AATCCACCGTCCCCTAATGCAGAAACCGTTTAGGTG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTAGGACGAAGTACTTCTaGTTGTTCTCGCCTACACAG +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFRTKYF*LFSPTQ
Trigger: CTGTGTAGGCGAGAACAACCAGAAGTACTTCGTCCT...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTCCAATTTGGGAGAACTaGCCTTTTCAAACACACAGG +
Preference number: 4 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSPIWEN*PFQTHR
Trigger: CCTGTGTGTTTGAAAAGGCCAGTTCTCCCAAATTGG...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTAGTGACCAGCTGAGATaGTTTGCTTTGGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFSDQLR*FALGIL
Trigger: CAGAATGCCCAAAGCAAACCATCTCAGCTGGTCACT...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
3UTR CAA 72 bp CACTACCCTGCAAATGATGGCTACATTCCTCAGTCATaGTGCTCTTGGCAAAATATCAGTCTGAACAAAAAT +
Preference number: 4 (lower is better)
Translates to: HYPANDGYIPQS*CSWQNISLNKN
Trigger: ATTTTTGTTCAGACTGATATTTTGCCAAGAGCACAATGACTGAGGAATGTAGCCATCATTTGCAGGGTAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTGTGGAGAGAAGGAGCTaGACTTTGTCCAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFVERRS*TLSNLL
Trigger: AAGAAGATTGGACAAAGTGCAGCTCCTTCTCTCCAC...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAACTTAAGCTTGAGGTTTaGAGAGGAGCAGTAATAGTA +
Preference number: 4 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKLKLEV*RGAVIV
Trigger: TACTATTACTGCTCCTCTGCAAACCTCAAGCTTAAG...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR GCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTTTGCTTTGGGCATTCTaGATTCTCTTCCTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFLLWAF*ILFLGD
Trigger: ATCACCCAGGAAGAGAATGCAGAATGCCCAAAGCAA...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR CCA 90 bp TTAAAAAGGGTCAAGGTCATGAAAGACAAAGGAAGACTGAGGAACTGTCACAAAAAATGCCCTGGAAGATaGAGTATTACCAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LKRVKVMKDKGRLRNCHKKCPGR*SITNLF
Trigger: GAAGAGATTGGTAATACTCCATCTTCCAGGGCATTT...TTTGTGACAGTTCCTCAGTCTTCCTTTGTCTTTCATGACCTTGACCCTTTTTAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGAGTTGTTTCAGAAAATaGATCTTGTTGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: FKERGKLHPISLPVRSHLSCFRK*ILLTQV
Trigger: GACTTGTGTCAACAAGATCCATTTTCTGAAACAACT...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTGAAAATGGATCTTGTTaGCACAAGTCTAAAGGGACC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFENGSC*HKSKGT
Trigger: GGTCCCTTTAGACTTGTGTCAACAAGATCCATTTTC...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCTGAGTGGTTACTTTTaGGGATGGAATTCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFLSGYF*GWNSRG
Trigger: TCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS-3UTR TCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTACCACCTTCACCCAATaGTCAAAGTTAACATCACAA +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFTTFTQ*SKLTSQ
Trigger: TTGTGATGTTAACTTTGATCATTGGGTGAAGGTGGT...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTGGTTACTTTTGGGGATaGAATTCTAGAGGATTTGTA +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFGYFWG*NSRGFV
Trigger: TACAAATCCTCTAGAATTCCATCCCCAAAAGTAACC...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
3UTR CAA 72 bp GTGAATAAGGTACATACATTAGTTAAGGGTATGGTGTaGCCAATGTCCAGGGTTTTATATTTGTATTATGGT +
Preference number: 4 (lower is better)
Translates to: VNKVHTLVKGMV*PMSRVLYLYYG
Trigger: ACCATAATACAAATATAAAACCCTGGACATTGGCAACACCATACCCTTAACTAATGTATGTACCTTATTCAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CCA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTAGTTGTTTCAGAAAATaGATCTTGTTGACACAAGTC +
Preference number: 4 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFSCFRK*ILLTQV
Trigger: GACTTGTGTCAACAAGATCCATTTTCTGAAACAACT...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS CCA 90 bp TCGGGCTTCGGCGATGGCTCCTCGGAACGAGGCGCCGCGGCTCTCTaGACTCGGCCAGACACCGGGCGGCGCGCAGGAGAAGCCCATCGA +
Preference number: 5 (lower is better)
Translates to: SGFGDGSSERGAAAL*TRPDTGRRAGEAHR
Trigger: TCGATGGGCTTCTCCTGCGCGCCGCCCGGTGTCTGGCCGAGTCCAGAGAGCCGCGGCGCCTCGTTCCGAGGAGCCATCGCCGAAGCCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296127.7
ENST00000339420.7
ENST00000342790.8
ENST00000424952.7
ENST00000455235.5
CDS-3UTR CAA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGTGCCGCACCATGTCTTaGTCACTGGGGATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGCRTMS*SLGISG
Trigger: GCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCA...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGTGTGTGATGGGCCTTTaGGCCCAGGTCAGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGCVMGL*AQVSLG
Trigger: ACCCAGACTGACCTGGGCCAAAAGGCCCATCACACA...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS CCA 90 bp AAGGTCTCCTTTACTGACTGCCAGCTCCCCATGTGCTCCCTGGGCTaGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCCTCTGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: KVSFTDCQLPMCSLG*FFRLRRSMPCLWVS
Trigger: CGACACCCAGAGGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466084.1
CDS-3UTR CAA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCCCTAACACTGAGGTCTaGCAGGGGCATGCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASPNTEV*QGHALL
Trigger: CAGCAGAGCATGCCCCTGCAAGACCTCAGTGTTAGG...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS GCA 90 bp AAGTCCCCACCAAAGGTCTCCTTTACTGACTGCCAGCTCCCCATGTaGTCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCGTC +
Preference number: 5 (lower is better)
Translates to: KSPPKVSFTDCQLPM*SLGWFFRLRRSMPV
Trigger: GACGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTTTGGTGGGGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339420.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTTAGTGGCATTTCCTTaGGGCACTGCCCCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLLVAFP*GTAPGS
Trigger: GGACCCCGGGGCAGTGCCCAAAGGAAATGCCACTAA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCAGCATTTGGGGCACTaGTACACCACCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLQHLGH*YTTCPG
Trigger: GCCTGGGCAGGTGGTGTACAAGTGCCCCAAATGCTG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGCAAACCGTGTCCACTaGGGGGATGAGGTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLANRVH*GDEVAV
Trigger: CACAGCGACCTCATCCCCCAAGTGGACACGGTTTGC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS CCA 90 bp AAGGTCTCCTTTACTGACTGCCAGCTCCCCATGTGCTCCCTGGGCTaGTTCTTTCGTTTGAGGCGCTCGATGCCCGTCTCATCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: KVSFTDCQLPMCSLG*FFRLRRSMPVSSVQ
Trigger: CTGCACAGATGAGACGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTGGCAGTCAGTAAAGGAGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339420.7
CDS-3UTR CAA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGTTAGTGGCATTTCCTTaGGGCACTGCCCCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKLVAFP*GTAPGS
Trigger: GGACCCCGGGGCAGTGCCCAAAGGAAATGCCACTAA...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CAGCAACCACTGGAATGGGGTTTAGGAGCACCAGAACGCTGCTCAGACCTTCAGAACCATGCCTGGCCCTaGCAGGTAGATGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: QQPLEWGLGAPERCSDLQNHAWP*QVDVAA
Trigger: GGCTGCCACATCTACCTGCAAGGGCCAGGCATGGTT...CTGAAGGTCTGAGCAGCGTTCTGGTGCTCCTAAACCCCATTCCAGTGGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGGGCTGGTTCTTTCGTTaGAGGCGCTCGATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRGWFFR*RRSMPC
Trigger: GCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCC...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS GCA 90 bp GTGGGGCCCTGGCTGAATACCAGCCAACATTTAGAATACCGATCCTaGCCTAACCTAGGAGGCAGGAAGGCCGTGAAGCCTCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: VGPWLNTSQHLEYRS*PNLGGRKAVKPQPE
Trigger: TTCTGGCTGAGGCTTCACGGCCTTCCTGCCTCCTAGGTTAGGGCAGGATCGGTATTCTAAATGTTGGCTGGTATTCAGCCAGGGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS-3UTR CAA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGTTAGTGGCATTTCCTTaGGGCACTGCCCCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSILRLHLQTLTFFSSELLVAFP*GTAPGS
Trigger: GGACCCCGGGGCAGTGCCCAAAGGAAATGCCACTAA...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTTCTCGCCTACACAGTaGTTGACCCAGGGACAGTGG +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLFSPTQ*LTQGQW
Trigger: CCACTGTCCCTGGGTCAACAACTGTGTAGGCGAGAA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGTTCTCGCCTACACAGTaGTTGACCCAGGGACAGTGG +
Preference number: 5 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPEFSPTQ*LTQGQW
Trigger: CCACTGTCCCTGGGTCAACAACTGTGTAGGCGAGAA...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGTGCCGCACCATGTCTTaGTCACTGGGGATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKCRTMS*SLGISG
Trigger: GCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCA...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGTTCAAAAGCTCCCTTaGCTGGGCGGAGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASVQKLP*LGGECE
Trigger: TTCACATTCTCCGCCCAGCAAAGGGAGCTTTTGAAC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGAATGCAGGGTCCTCTTaGAACCATGCCTGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPENAGSS*NHAWPL
Trigger: CAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCATT...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCAGGCTAGTCTCCCCTGATGTCAGTGTCCCAACCCAGGTCCCCAAGGCAAGCGAACCAGGATGCTGCTaGGCTCTTTTCTTTCTCACG +
Preference number: 5 (lower is better)
Translates to: SRLVSPDVSVPTQVPKASEPGCC*ALFFLT
Trigger: CGTGAGAAAGAAAAGAGCCAAGCAGCATCCTGGTTC...GCTTGCCTTGGGGACCTGGGTTGGGACACTGACATCAGGGGAGACTAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGCCTTTGGGGCTGGTGTaGTACCTCTGCTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRPLGLV*YLCFQA
Trigger: GGCCTGAAAGCAGAGGTACAACACCAGCCCCAAAGG...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS TCA 90 bp GCACTCAGAATTTGCCACTCAGGAACACTTAGTCAGGACAAGGCCTaGCCAGGAGGGACCAGAGGGCCAGCTAGCGATTCCCTACAGATC +
Preference number: 5 (lower is better)
Translates to: ALRICHSGTLSQDKA*PGGTRGPASDSLQI
Trigger: GATCTGTAGGGAATCGCTAGCTGGCCCTCTGGTCCCTCCTGGTCAGGCCTTGTCCTGACTAAGTGTTCCTGAGTGGCAAATTCTGAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479314.1
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTTGATGCTGCAGCATTaGGGGCACTTGTACACCACC +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLLMLQH*GHLYTT
Trigger: GGTGGTGTACAAGTGCCCCAAATGCTGCAGCATCAA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGTACAAGGCAGGCAATaGCTTTGCGAGTTAGCAGGC +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLVQGRQ*LCELAG
Trigger: GCCTGCTAACTCGCAAAGCAATTGCCTGCCTTGTAC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGGGTCTGGAGAAGGGGTaGAACCAGTTCAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKGLEKG*NQFREK
Trigger: CTTCTCCCTGAACTGGTTCAACCCCTTCTCCAGACC...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCCTGATGGATCCTCCATaGTTTCGGTGTCTGACAGCG +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLLMDPP*FRCLTA
Trigger: CGCTGTCAGACACCGAAACAATGGAGGATCCATCAG...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGAGGCGAGGCTCAGGGTaGGACAGGTTAATTACCTAC +
Preference number: 5 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPERRGSG*DRLITY
Trigger: GTAGGTAATTAACCTGTCCAACCCTGAGCCTCGCCT...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCTGGGCTGGTTCTTTCGTTTGAGGCGCTCGATGCCCTGCAGGGAGAAGGGGAAGTTGGGGCTGACTTaGTGTAGAAAGATGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLGWFFRLRRSMPCREKGKLGLT*CRKMSS
Trigger: AGAGGACATCTTTCTACACAAAGTCAGCCCCAACTT...CCCCTTCTCCCTGCAGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS TCA 90 bp CTGAAACAGGAAACCAGTGCAGACACCATTGTTGTGAGAATCCTCTaGCCTCACGGGCTCCCGGGACAGGGGCACTCAGAATTTGCCACT +
Preference number: 5 (lower is better)
Translates to: LKQETSADTIVVRIL*PHGLPGQGHSEFAT
Trigger: AGTGGCAAATTCTGAGTGCCCCTGTCCCGGGAGCCCGTGAGGTCAGAGGATTCTCACAACAATGGTGTCTGCACTGGTTTCCTGTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479314.1
CDS-3UTR CAA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTCAGCATTTGGGGCACTaGTACACCACCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: CCLALFFLTVASFLSQHPQHLGH*YTTCPG
Trigger: GCCTGGGCAGGTGGTGTACAAGTGCCCCAAATGCTG...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGCAAACCGTGTCCACTaGGGGGATGAGGTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: CCLALFFLTVASFLSQHPANRVH*GDEVAV
Trigger: CACAGCGACCTCATCCCCCAAGTGGACACGGTTTGC...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp GAGAGCTGGGACATCACCATATGGCAGACCCGGCTACAGAGGAAACACCCAAAAGGTCTGGAGAAGGGGTaGAACCAGTTCAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ESWDITIWQTRLQRKHPKGLEKG*NQFREK
Trigger: CTTCTCCCTGAACTGGTTCAACCCCTTCTCCAGACC...TTTTGGGTGTTTCCTCTGTAGCCGGGTCTGCCATATGGTGATGTCCCAGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGCTGATGGATCCTCCATaGTTTCGGTGTCTGACAGCG +
Preference number: 5 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKLMDPP*FRCLTA
Trigger: CGCTGTCAGACACCGAAACAATGGAGGATCCATCAG...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGAATGCAGGGTCCTCTTaGAACCATGCCTGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: LSILRLHLQTLTFFSSELNAGSS*NHAWPL
Trigger: CAAGGGCCAGGCATGGTTCAAAGAGGACCCTGCATT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGCCCTTCTGTTGGGCTTaGTGCAGAAGATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRPFCWA*CRRCCF
Trigger: GAAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGG...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGCCTAACACTGAGGTCTaGCAGGGGCATGCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRPNTEV*QGHALL
Trigger: CAGCAGAGCATGCCCCTGCAAGACCTCAGTGTTAGG...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTAGGACTCATGCCCTTTaGCCTGGAGCTGGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: CCLALFFLTVASFLSQHPRTHAL*PGAGRG
Trigger: CCCCCTTCCAGCTCCAGGCAAAAGGGCATGAGTCCT...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGCTGAGGTCTACCTaGGAGATGGGGTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHWLRST*EMGSVK
Trigger: CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCA...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGCCTGCACAGAGGCCTTaGACCCTCCACTGGGGGCAC +
Preference number: 5 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVPAQRP*TLHWGH
Trigger: GTGCCCCCAGTGGAGGGTCAAAGGCCTCTGTGCAGG...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS CCA 90 bp ACTGGCATGGTTTGGCTATCTTGTCCACACATGGTTATGCAGAGGTaGCATTATCGAGTGGGCTGCATGCAGTGGTGCTCACAGGCCACA +
Preference number: 5 (lower is better)
Translates to: TGMVWLSCPHMVMQR*HYRVGCMQWCSQAT
Trigger: TGTGGCCTGTGAGCACCACTGCATGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTGTGGACAAGATAGCCAAACCATGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS-3UTR CAA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTTTCTCGCCTACACAGTaGTTGACCCAGGGACAGTGG +
Preference number: 5 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSFSPTQ*LTQGQW
Trigger: CCACTGTCCCTGGGTCAACAACTGTGTAGGCGAGAA...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCACGAAGTACTTCTGGTaGTTCTCGCCTACACAGTTG +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLTKYFW*FSPTQL
Trigger: CAACTGTGTAGGCGAGAACAACCAGAAGTACTTCGT...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCGAAAACTCAAGTAGATaGTGGATAGTCGGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLENSSR*WIVGLP
Trigger: TGGGAGGCCGACTATCCACAATCTACTTGAGTTTTC...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296127.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCACCTCCCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGAAGGAGCTGCACTTaGTCCAATCTTCTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: APPRTGTDMAEVYLGDGVRRSCT*SNLLQS
Trigger: GCTTTGAAGAAGATTGGACAAAGTGCAGCTCCTTCT...GACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACAAGATGGGCACCAATTaGGGAGAACTGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADKMGTN*GELAFS
Trigger: TGAAAAGGCCAGTTCTCCCAAATTGGTGCCCATCTT...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATGCTAAGGCAGGAAAATaGCTGGAGGCCGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHAKAGK*LEAGHL
Trigger: CAAATGCCCGGCCTCCAGCAATTTTCCTGCCTTAGC...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TGTGCAGAACAGACTCAGCTGAGCCCCACAGAACGAGAACAGGCTGTTCCCTGCGCAAAGTTCTTAAGCTaGAGGTTTGCAGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: CAEQTQLSPTEREQAVPCAKFLS*RFAEEQ
Trigger: CTGCTCCTCTGCAAACCTCAAGCTTAAGAACTTTGC...GCAGGGAACAGCCTGTTCTCGTTCTGTGGGGCTCAGCTGAGTCTGTTCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTTGCAACGAGGACACATaGCTTCAGCAGTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSCNEDT*LQQCSC
Trigger: GCAGGAGCACTGCTGAAGCAATGTGTCCTCGTTGCA...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS GCA 90 bp TCTTGTCCACACATGGTTATGCAGAGGTGGCATTATCGAGTGGGCTaGATGCAGTGGTGCTCACAGGCCACAGGCCTGAACATAAGCATT +
Preference number: 5 (lower is better)
Translates to: SCPHMVMQRWHYRVG*MQWCSQATGLNISI
Trigger: AATGCTTATGTTCAGGCCTGTGGCCTGTGAGCACCACTGCATGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTGTGGACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS GCA 90 bp CTGTCCATACTGGCATGGTTTGGCTATCTTGTCCACACATGGTTATaGAGAGGTGGCATTATCGAGTGGGCTGCATGCAGTGGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: LSILAWFGYLVHTWL*RGGIIEWAACSGAH
Trigger: GTGAGCACCACTGCATGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTGTGGACAAGATAGCCAAACCATGCCAGTATGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS CCA 90 bp GCCACAGGCCTGAACATAAGCATTTTGGGCTCTAAGGTGGGGCCCTaGCTGAATACCAGCCAACATTTAGAATACCGATCCTGCCCTAAC +
Preference number: 5 (lower is better)
Translates to: ATGLNISILGSKVGP*LNTSQHLEYRSCPN
Trigger: GTTAGGGCAGGATCGGTATTCTAAATGTTGGCTGGTATTCAGCCAGGGCCCCACCTTAGAGCCCAAAATGCTTATGTTCAGGCCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS-3UTR CAA 90 bp CCAGAACAGGGACTGACATGGCTGAGGTCTACCTTGGAGATGGGGTCAGTGAAGACGAAGTACTTCTGGTaGTTCTCGCCTACACAGTTG +
Preference number: 5 (lower is better)
Translates to: PEQGLTWLRSTLEMGSVKTKYFW*FSPTQL
Trigger: CAACTGTGTAGGCGAGAACAACCAGAAGTACTTCGT...CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCATGTCAGTCCCTGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATCTTGGAGAACGGTTCTaGATGAGCCGTCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHLGERF*MSRLSA
Trigger: TGCACTGAGACGGCTCATCAAGAACCGTTCTCCAAG...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTCCCTTCTGTTGGGCTTaGTGCAGAAGATGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLPFCWA*CRRCCF
Trigger: GAAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGG...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTTCTCTGGCAGGATCGTaGCCCTTCACAGAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVSLAGS*PFTECP
Trigger: TGGACACTCTGTGAAGGGCAACGATCCTGCCAGAGA...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTTCTCTGGCAGGATCGTaGCCCTTCACAGAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLSLAGS*PFTECP
Trigger: TGGACACTCTGTGAAGGGCAACGATCCTGCCAGAGA...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACAAAGAAAGAGGCAAATaGCACCCAATCTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADKERGK*HPISLP
Trigger: AGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTT...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTGTCTCGCTCAGTGAAGACTCCAGTGTCTGTGGAATGGGGGCTCATTTTCGGAAAGCCACATGGGTGTaGAAACCCACACGTAGAAAG +
Preference number: 5 (lower is better)
Translates to: AVSLSEDSSVCGMGAHFRKATWV*KPTRRK
Trigger: CTTTCTACGTGTGGGTTTCAACACCCATGTGGCTTT...CCGAAAATGAGCCCCCATTCCACAGACACTGGAGTCTTCACTGAGCGAGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACAAAAGAAGGTTCAGGTaGGGAGTACGCTGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHKRRFR*GVRWSV
Trigger: CACTGACCAGCGTACTCCCAACCTGAACCTTCTTTT...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTGCTTGTCCTCACTCCTaGGATCAGCTTCATCGGCTC +
Preference number: 5 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLACPHS*DQLHRL
Trigger: GAGCCGATGAAGCTGATCCAAGGAGTGAGGACAAGC...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp ACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACTGGGGATCTCTGGCTGACCCACAGGATGATTATTaGCCATTCATGTGGCATGCT +
Preference number: 5 (lower is better)
Translates to: TAMSPAAPCLCHWGSLADPQDDY*PFMWHA
Trigger: AGCATGCCACATGAATGGCAAATAATCATCCTGTGG...GTCAGCCAGAGATCCCCAGTGACAAAGACATGGTGCGGCAGGTGACATCGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTGGAAGCCAAGGGAATTaGCTGTGGGTTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVGSQGN*LWVCWA
Trigger: AGCCCAGCAAACCCACAGCAAATTCCCTTGGCTTCC...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTTTGATGCTGCAGCATTaGGGGCACTTGTACACCACC +
Preference number: 5 (lower is better)
Translates to: CCLALFFLTVASFLSQHPLMLQH*GHLYTT
Trigger: GGTGGTGTACAAGTGCCCCAAATGCTGCAGCATCAA...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTGTTCAGTCCATAGGTaGTCCAATCTTCTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLCSVHR*SNLLQS
Trigger: GCTTTGAAGAAGATTGGACAACCTATGGACTGAACA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296127.7
CDS-3UTR CAA 90 bp TCTCAGGTGATGCTGATGTTGACGTTGCTGGTCTGGCAACCTCAAGAACACCTTGTACAAGGCAGGCAATaGCTTTGCGAGTTAGCAGGC +
Preference number: 5 (lower is better)
Translates to: SQVMLMLTLLVWQPQEHLVQGRQ*LCELAG
Trigger: GCCTGCTAACTCGCAAAGCAATTGCCTGCCTTGTAC...AAGGTGTTCTTGAGGTTGCCAGACCAGCAACGTCAACATCAGCATCACCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTCTTGGAGAACGGTTCTaGATGAGCCGTCTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: CCLALFFLTVASFLSQHPLGERF*MSRLSA
Trigger: TGCACTGAGACGGCTCATCAAGAACCGTTCTCCAAG...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCAGCCTCTTCCAAGCTGTCAACTCACCTGCCTCTGGGTGTCGGCTGCAACTCAATTGATGAAAAGATTTaGGAACCAGACAGACCTGGT +
Preference number: 5 (lower is better)
Translates to: AASSKLSTHLPLGVGCNSIDEKI*EPDRPG
Trigger: ACCAGGTCTGTCTGGTTCCAAAATCTTTTCATCAAT...TGAGTTGCAGCCGACACCCAGAGGCAGGTGAGTTGACAGCTTGGAAGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS CCA 90 bp GCTATTCTGTCCATACTGGCATGGTTTGGCTATCTTGTCCACACATaGTTATGCAGAGGTGGCATTATCGAGTGGGCTGCATGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: AILSILAWFGYLVHT*LCRGGIIEWAACSG
Trigger: ACCACTGCATGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTGTGGACAAGATAGCCAAACCATGCCAGTATGGACAGAATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS-3UTR CAA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTTTGATGCTGCAGCATTaGGGGCACTTGTACACCACC +
Preference number: 5 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLLMLQH*GHLYTT
Trigger: GGTGGTGTACAAGTGCCCCAAATGCTGCAGCATCAA...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TACCAAACGGGGATAAGAACCCTTCTGTTGGGCTTTGTGCAGAAGATGCTGCTTCAGAGTCCTCGTCCTTaGTCTCCTCTGATGGATCCT +
Preference number: 5 (lower is better)
Translates to: YQTGIRTLLLGFVQKMLLQSPRP*SPLMDP
Trigger: AGGATCCATCAGAGGAGACAAAGGACGAGGACTCTG...AAGCAGCATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTATCCCCGTTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GGGTTAGGACAACAAATAGGGGGCCCTACAGTCAGAGCAGCTCTTACCCAAAGTAAGATGGGCACCAATTaGGGAGAACTGGCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: GLGQQIGGPTVRAALTQSKMGTN*GELAFS
Trigger: TGAAAAGGCCAGTTCTCCCAAATTGGTGCCCATCTT...ACTTTGGGTAAGAGCTGCTCTGACTGTAGGGCCCCCTATTTGTTGTCCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CCATTGTTTCGGTGTCTGACAGCGATGTCACCTGCCGCACCATGTCTTTGTCACATAAGAACCCTTCTGTaGGGCTTTGTGCAGAAGATG +
Preference number: 5 (lower is better)
Translates to: PLFRCLTAMSPAAPCLCHIRTLL*GFVQKM
Trigger: CATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTAT...GTGACAAAGACATGGTGCGGCAGGTGACATCGCTGTCAGACACCGAAACAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCAGGACTCATGCCCTTTaGCCTGGAGCTGGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVRTHAL*PGAGRG
Trigger: CCCCCTTCCAGCTCCAGGCAAAAGGGCATGAGTCCT...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAAAACAGAATTGCCTTaGGGGCTGGTGTTGTACCTC +
Preference number: 5 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLKTELP*GLVLYL
Trigger: GAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TCCCCCACCAGGTGTCCAGACTATTCCATCCACGCACAGCGTCATGTCTCACTCTACATTCCTCAGTCATaGTGCTCTTGGCAAAATATC +
Preference number: 5 (lower is better)
Translates to: SPTRCPDYSIHAQRHVSLYIPQS*CSWQNI
Trigger: GATATTTTGCCAAGAGCACAATGACTGAGGAATGTA...GAGTGAGACATGACGCTGTGCGTGGATGGAATAGTCTGGACACCTGGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TGGAGGGAGTGGGTGGTGAATCCACTTCTTATACCAAACGGGGATAAGAACCCTACGAAGTACTTCTGGTaGTTCTCGCCTACACAGTTG +
Preference number: 5 (lower is better)
Translates to: WREWVVNPLLIPNGDKNPTKYFW*FSPTQL
Trigger: CAACTGTGTAGGCGAGAACAACCAGAAGTACTTCGT...AGGGTTCTTATCCCCGTTTGGTATAAGAAGTGGATTCACCACCCACTCCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGTTTCTGGTTGCTCTGTaGATGTTAGAATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: LSILRLHLQTLTFFSSELFLVAL*MLESHH
Trigger: ATGGTGGGATTCTAACATCAACAGAGCAACCAGAAA...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAAAGAAAGAGGCAAATaGCACCCAATCTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRKERGK*HPISLP
Trigger: AGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTCTGAGATGGTTTGCTTaGGGCATTCTGCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLLRWFA*GILHSL
Trigger: AAGAGAATGCAGAATGCCCAAAGCAAACCATCTCAG...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp GTGAAGAAGCGGGTGCTCGTACAGCAAGTGCCAACATGCATTAGGCAGCCGGAGGTACATGGGAACTCTTaGTACTGTTTTTGTCACATT +
Preference number: 5 (lower is better)
Translates to: VKKRVLVQQVPTCIRQPEVHGNS*YCFCHI
Trigger: AATGTGACAAAAACAGTACAAAGAGTTCCCATGTAC...CTCCGGCTGCCTAATGCATGTTGGCACTTGCTGTACGAGCACCCGCTTCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CCTTTGGTGAGACTGACTGAAAGGTACATGGGAACTCTTTGTACTGTTTTTGTCGTGGGTTTGCTGGGCTaGGGCACTGCTCCTTCACAT +
Preference number: 5 (lower is better)
Translates to: PLVRLTERYMGTLCTVFVVGLLG*GTAPSH
Trigger: ATGTGAAGGAGCAGTGCCCAAGCCCAGCAAACCCAC...GACAAAAACAGTACAAAGAGTTCCCATGTACCTTTCAGTCAGTCTCACCAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp TTGAAACCCACACGTAGAAAGCAAAGGTCAAGACGTGTTCAGGTCATGTATCCAGAATTTGCTGTGGGTTaGCTGGGCTTGGGCACTGCT +
Preference number: 5 (lower is better)
Translates to: LKPTRRKQRSRRVQVMYPEFAVG*LGLGTA
Trigger: AGCAGTGCCCAAGCCCAGCAAACCCACAGCAAATTC...TGGATACATGACCTGAACACGTCTTGACCTTTGCTTTCTACGTGTGGGTTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAACAGAGTCCTCGTCCTTaGTCTCCTCTGATGGATCCT +
Preference number: 5 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQQSPRP*SPLMDP
Trigger: AGGATCCATCAGAGGAGACAAAGGACGAGGACTCTG...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGGTTCAAAAGCTCCCTTaGCTGGGCGGAGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVVQKLP*LGGECE
Trigger: TTCACATTCTCCGCCCAGCAAAGGGAGCTTTTGAAC...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTTTTCTGGTTGCTCTGTaGATGTTAGAATCCCACCAT +
Preference number: 5 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSFLVAL*MLESHH
Trigger: ATGGTGGGATTCTAACATCAACAGAGCAACCAGAAA...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CGTTGCCCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTAACTTCCTGTCCAGATaGCAAGTTAATGGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: RCPSQSVQRCCPRTRMLLNFLSR*QVNGLY
Trigger: GTAAAGGCCATTAACTTGCAATCTGGACAGGAAGTT...AAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGGGCAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TGCTGCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTAATCTGAAAACAGAATaGCCTTTGGGGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: CCLALFFLTVASFLSQHPNLKTE*PLGLVL
Trigger: CAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATT...AGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp TTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGATCTCATCTGTGGCTGAGGTCTACCTaGGAGATGGGGTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: FKERGKLHPISLPVRSHLWLRST*EMGSVK
Trigger: CTTCACTGACCCCATCTCCAAGGTAGACCTCAGCCA...CAGATGAGATCTTACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CTCAGCATCCTGAGGCTGCACCTCCAAACACTGACCTTCTTCTCCTCTGAACTGAGATCTCATCTGGTTTaGACATCAGTTGCAATGCTT +
Preference number: 5 (lower is better)
Translates to: LSILRLHLQTLTFFSSELRSHLV*TSVAML
Trigger: AAGCATTGCAACTGATGTCAAAACCAGATGAGATCT...CAGTTCAGAGGAGAAGAAGGTCAGTGTTTGGAGGTGCAGCCTCAGGATGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGACCTCAAGAACACCTTaGAGGAGGATTCTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRTSRTP*RRILAK
Trigger: TTTTGCTAGAATCCTCCTCAAAGGTGTTCTTGAGGT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTGGCTGGTTCTTTCGTTaGAGGCGCTCGATGCCCGTC +
Preference number: 5 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSGWFFR*RRSMPV
Trigger: GACGGGCATCGAGCGCCTCAAACGAAAGAACCAGCC...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339420.7
CDS-3UTR CAA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTAACTTCCTGTCCAGATaGCAAGTTAATGGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVNFLSR*QVNGLY
Trigger: GTAAAGGCCATTAACTTGCAATCTGGACAGGAAGTT...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GCTTGGCTCTTTTCTTTCTCACGGTCGCCAGTTTCCTTTCTCAGCATCCTGAGGAGATCTCATCTGGTTTaGACATCAGTTGCAATGCTT +
Preference number: 5 (lower is better)
Translates to: AWLFSFSRSPVSFLSILRRSHLV*TSVAML
Trigger: AAGCATTGCAACTGATGTCAAAACCAGATGAGATCT...CCTCAGGATGCTGAGAAAGGAAACTGGCGACCGTGAGAAAGAAAAGAGCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp CCTTCACAGAGTGTCCAAAGATGCTGTCCAAGAACCAGGATGCTGCTTGGCTCTAACTTTCAGGGAGTGTaGACTTTTGAGTCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: PSQSVQRCCPRTRMLLGSNFQGV*TFESRK
Trigger: CTTTCTAGACTCAAAAGTCAACACTCCCTGAAAGTT...AGAGCCAAGCAGCATCCTGGTTCTTGGACAGCATCTTTGGACACTCTGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CAGTGGTCACAGACACCACAGGCTTCAAATGGGGTGAATAGAGGGCAGACTCATATAAAATGTTTACCTTaGGTGAGACTGACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: QWSQTPQASNGVNRGQTHIKCLP*VRLTER
Trigger: CCTTTCAGTCAGTCTCACCAAAGGTAAACATTTTAT...ATGAGTCTGCCCTCTATTCACCCCATTTGAAGCCTGTGGTGTCTGTGACCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp ACTGGCCTTTTCAAACACACAGGCAGGGTTTATGGTCAGTTCTACCTACATGTGGTTAAGGGTATGGTGTaGCCAATGTCCAGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: TGLFKHTGRVYGQFYLHVVKGMV*PMSRVL
Trigger: TAAAACCCTGGACATTGGCAACACCATACCCTTAAC...CACATGTAGGTAGAACTGACCATAAACCCTGCCTGTGTGTTTGAAAAGGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp CAATCTGAAGGACAGCCTACAGAATACCTGCCCTACAATCTTCAAAAGGGTCAAAATCTGAAAACAGAATaGCCTTTGGGGCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: QSEGQPTEYLPYNLQKGQNLKTE*PLGLVL
Trigger: CAACACCAGCCCCAAAGGCAATTCTGTTTTCAGATT...TTGACCCTTTTGAAGATTGTAGGGCAGGTATTCTGTAGGCTGTCCTTCAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGGCGAGGCTCAGGGTaGGACAGGTTAATTACCTAC +
Preference number: 5 (lower is better)
Translates to: KSFLFKERGKLHPISLPVRRGSG*DRLITY
Trigger: GTAGGTAATTAACCTGTCCAACCCTGAGCCTCGCCT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GGTTGCTCTGTTGATGTTAGAATCCCACCATCACCCCTCTCGTGGGTCATAGTTTCTTTTCACATTTCTTaGATATCTAAGGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: GCSVDVRIPPSPLSWVIVSFHIS*ISKGTF
Trigger: GAAGGTGCCCTTAGATATCAAAGAAATGTGAAAAGA...AACTATGACCCACGAGAGGGGTGATGGTGGGATTCTAACATCAACAGAGCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424952.7
CDS-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAAGAAGGAGCTGCACTTaGTCCAATCTTCTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: KSFLFKERGKLHPISLPVRRSCT*SNLLQS
Trigger: GCTTTGAAGAAGATTGGACAAAGTGCAGCTCCTTCT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp AAGAGCTTTTTATTCAAAGAAAGAGGCAAATTGCACCCAATCTCTCTCCCTGTAATAAGAACCCTTCTGTaGGGCTTTGTGCAGAAGATG +
Preference number: 5 (lower is better)
Translates to: KSFLFKERGKLHPISLPVIRTLL*GFVQKM
Trigger: CATCTTCTGCACAAAGCCCAACAGAAGGGTTCTTAT...TACAGGGAGAGAGATTGGGTGCAATTTGCCTCTTTCTTTGAATAAAAAGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp GTTCTACCTACATGTGTTATTAGACTCCCTCCAAGAGGTAACATTCAATTAAGTAAAACAGAATTGCCTTaGGGGCTGGTGTTGTACCTC +
Preference number: 5 (lower is better)
Translates to: VLPTCVIRLPPRGNIQLSKTELP*GLVLYL
Trigger: GAGGTACAACACCAGCCCCAAAGGCAATTCTGTTTT...ACTTAATTGAATGTTACCTCTTGGAGGGAGTCTAATAACACATGTAGGTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339420.7
ENST00000424952.7
CDS-3UTR CAA 90 bp AACATTTGTCTGAGTGGTTACTTTTGGGGATGGAATTCTAGAGGATTTGTATTTCTGAGATGGTTTGCTTaGGGCATTCTGCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: NICLSGYFWGWNSRGFVFLRWFA*GILHSL
Trigger: AAGAGAATGCAGAATGCCCAAAGCAAACCATCTCAG...AAATACAAATCCTCTAGAATTCCATCCCCAAAAGTAACCACTCAGACAAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424952.7
ENST00000443879.2
CDS CCA 72 bp GGCGATGGCTCCTCGGAACGAGGCGCCGCGGCTCTCTaGACTCGGCCAGACACCGGGCGGCGCGCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: GDGSSERGAAAL*TRPDTGRRAGE
Trigger: TTCTCCTGCGCGCCGCCCGGTGTCTGGCCGAGTCCAGAGAGCCGCGGCGCCTCGTTCCGAGGAGCCATCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296127.7
ENST00000339420.7
ENST00000342790.8
ENST00000424952.7
ENST00000455235.5
CDS GCA 72 bp GGTCGGGGTCCTTCAGACCACATACTGGTACGGGTCTaGCTTCCCTTGGTCTGGCGTGGCAAAGGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GRGPSDHILVRV*LPLVWRGKGAG
Trigger: GCCAGCCCCTTTGCCACGCCAGACCAAGGGAAGGCAGACCCGTACCAGTATGTGGTCTGAAGGACCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296127.7
ENST00000342790.8
ENST00000424952.7
ENST00000479314.1
CDS CAA 72 bp CAGCTCCCCATGTGCTCCCTGGGCTGGTTCTTTCGTTaGAGGCGCTCGATGCCCGTCTCATCTGTGCAGATG +
Preference number: 6 (lower is better)
Translates to: QLPMCSLGWFFR*RRSMPVSSVQM
Trigger: CATCTGCACAGATGAGACGGGCATCGAGCGCCTCAAACGAAAGAACCAGCCCAGGGAGCACATGGGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339420.7
CDS TCA 72 bp GAAACCAGTGCAGACACCATTGTTGTGAGAATCCTCTaGCCTCACGGGCTCCCGGGACAGGGGCACTCAGAA +
Preference number: 6 (lower is better)
Translates to: ETSADTIVVRIL*PHGLPGQGHSE
Trigger: TTCTGAGTGCCCCTGTCCCGGGAGCCCGTGAGGTCAGAGGATTCTCACAACAATGGTGTCTGCACTGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479314.1
CDS GCA 72 bp CACATGGTTATGCAGAGGTGGCATTATCGAGTGGGCTaGATGCAGTGGTGCTCACAGGCCACAGGCCTGAAC +
Preference number: 6 (lower is better)
Translates to: HMVMQRWHYRVG*MQWCSQATGLN
Trigger: GTTCAGGCCTGTGGCCTGTGAGCACCACTGCATGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS GCA 72 bp CATTTCCTTTGGGCACTGCCCCCAAGAGGCACTTGCTaGGGCCTGAAACAGGCTTGTCCAGCTTTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: HFLWALPPRGTC*GLKQACPAFQE
Trigger: TTCCTGAAAAGCTGGACAAGCCTGTTTCAGGCCGCAGCAAGTGCCTCTTGGGGGCAGTGCCCAAAGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342790.8
CDS TCA 72 bp TGGTTTGCTTTGGGCATTCTGCATTCTCTTCCTGGGTaGTCATCTGCAGCCGTCTCATCTGTGCAGATGGAG +
Preference number: 6 (lower is better)
Translates to: WFALGILHSLPG*SSAAVSSVQME
Trigger: CTCCATCTGCACAGATGAGACGGCTGCAGATGATCACCCAGGAAGAGAATGCAGAATGCCCAAAGCAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443879.2
CDS GCA 72 bp CTGGCATGGTTTGGCTATCTTGTCCACACATGGTTATaGAGAGGTGGCATTATCGAGTGGGCTGCATGCAGT +
Preference number: 6 (lower is better)
Translates to: LAWFGYLVHTWL*RGGIIEWAACS
Trigger: ACTGCATGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTGTGGACAAGATAGCCAAACCATGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS CCA 72 bp GTTTGGCTATCTTGTCCACACATGGTTATGCAGAGGTaGCATTATCGAGTGGGCTGCATGCAGTGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: VWLSCPHMVMQR*HYRVGCMQWCS
Trigger: TGAGCACCACTGCATGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTGTGGACAAGATAGCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS CCA 72 bp TCCATACTGGCATGGTTTGGCTATCTTGTCCACACATaGTTATGCAGAGGTGGCATTATCGAGTGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: SILAWFGYLVHT*LCRGGIIEWAA
Trigger: TGCAGCCCACTCGATAATGCCACCTCTGCATAACCATGTGTGGACAAGATAGCCAAACCATGCCAGTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS CAA 90 bp CCTCAGCCAGAAGAGTCACCTAGGATTGAATCCCTAAAATCTGCTTaGGCTGGGAAATACTTCCTGTGGTGCCAAGTAACAGAATGCTGC +
Preference number: 6 (lower is better)
Translates to: PQPEESPRIESLKSA*AGKYFLWCQVTECC
Trigger: GCAGCATTCTGTTACTTGGCACCACAGGAAGTATTTCCCAGCCAAAGCAGATTTTAGGGATTCAATCCTAGGTGACTCTTCTGGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS CAA 72 bp AAGCTATTCTGTCCATACTGGCATGGTTTGGCTATCTaGTCCACACATGGTTATGCAGAGGTGGCATTATCG +
Preference number: 6 (lower is better)
Translates to: KLFCPYWHGLAI*STHGYAEVALS
Trigger: CGATAATGCCACCTCTGCATAACCATGTGTGGACAAGATAGCCAAACCATGCCAGTATGGACAGAATAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478669.1
CDS CAA 72 bp GAAGAGTCACCTAGGATTGAATCCCTAAAATCTGCTTaGGCTGGGAAATACTTCCTGTGGTGCCAAGTAACA +
Preference number: 6 (lower is better)
Translates to: EESPRIESLKSA*AGKYFLWCQVT
Trigger: TGTTACTTGGCACCACAGGAAGTATTTCCCAGCCAAAGCAGATTTTAGGGATTCAATCCTAGGTGACTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478669.1