RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC23 (Homo sapiens)

Ensembl gene IDs: ENSG00000184307

Ensembl transcript IDs: ENST00000330212.7, ENST00000478793.1, ENST00000488129.1, ENST00000491556.1, ENST00000496083.1, ENST00000498275.5, ENST00000638807.1, ENST00000638807.2

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTTCCACATCCATCTTCCCTCACGTGACCCTCATGACGGCTCTGTaGGGTAGCCAGGGCAGGCATCAGTACCCCACTTTGCAGATGACC +
Preference number: 1 (lower is better)
Translates to: LSTSIFPHVTLMTAL*GSQGRHQYPTLQMT
Trigger: GGTCATCTGCAAAGTGGGGTACTGATGCCTGCCCTGGCTACCTCACAGAGCCGTCATGAGGGTCACGTGAGGGAAGATGGATGTGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR TCA 90 bp TTGAAATCATGTTCGAGGGGCTTGCTCCTCTGCCCAAGAGACTGCTaGTTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCA +
Preference number: 1 (lower is better)
Translates to: LKSCSRGLLLCPRDC*FIGSPGNPPLPPPP
Trigger: TGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAGTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATGATTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.1
3UTR GCA 90 bp ATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATaGTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAA +
Preference number: 1 (lower is better)
Translates to: IYRFTGQSSTAATTK*FPGTDSFTEALSFQ
Trigger: TTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.1
3UTR TCA 90 bp AACTCAAACCATCCAATCACCCAGACCATTAGGATCACAATGAGTTaGGACTGCAGGCTCTATACTGTGACATCTCGTCAGTGGCTCCAT +
Preference number: 1 (lower is better)
Translates to: NSNHPITQTIRITMS*DCRLYTVTSRQWLH
Trigger: ATGGAGCCACTGACGAGATGTCACAGTATAGAGCCTGCAGTCTCAACTCATTGTGATCCTAATGGTCTGGGTGATTGGATGGTTTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR TCA 90 bp GTCTTCACTAACCGTTCAGTCTTTAACCTGCTGCTGATCCTACAATaGAAACACTTAGTGCCAGCTGAAGCGTGGATGCTTGTCTATCAG +
Preference number: 1 (lower is better)
Translates to: VFTNRSVFNLLLILQ*KHLVPAEAWMLVYQ
Trigger: CTGATAGACAAGCATCCACGCTTCAGCTGGCACTAAGTGTTTTCATTGTAGGATCAGCAGCAGGTTAAAGACTGAACGGTTAGTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR GCA 90 bp GAACATACTGAATCGTACTCAGTAGTGAGTTTAGGATGGCTTTCCTaGTCCCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGTGCA +
Preference number: 1 (lower is better)
Translates to: EHTESYSVVSLGWLS*SPASPLQCLIQKGA
Trigger: TGCACCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAAACTCACTACTGAGTACGATTCAGTATGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CCA 90 bp CATCCACAGGAACATACTGAATCGTACTCAGTAGTGAGTTTAGGATaGCTTTCCTGCTCCCCTGCATCACCCTTGCAGTGTTTAATACAA +
Preference number: 1 (lower is better)
Translates to: HPQEHTESYSVVSLG*LSCSPASPLQCLIQ
Trigger: TTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAAACTCACTACTGAGTACGATTCAGTATGTTCCTGTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CCA 90 bp TTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAACTCATCTaGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATA +
Preference number: 1 (lower is better)
Translates to: FTEALSFQRFHNKLI*PLERTKAYNETPQI
Trigger: TATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGATGAGTTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR TCA 90 bp AATTTGTATGATCAATGGCTAGATAATCAGAGTTGGCTCTACAGCTaGCATTCAAAAGCACGACTACCAATTTCTGCCCACACAGGCTAT +
Preference number: 1 (lower is better)
Translates to: NLYDQWLDNQSWLYS*HSKARLPISAHTGY
Trigger: ATAGCCTGTGTGGGCAGAAATTGGTAGTCGTGCTTTTGAATGTCAGCTGTAGAGCCAACTCTGATTATCTAGCCATTGATCATACAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR TCA 90 bp GTGCTAGCACCTTACCTGGTGAAACATGGGAAGAGGAAAAACACATaGATGCCTGTTGGAGTTATTTATAAGAAACCCAAGCAGAATTTA +
Preference number: 1 (lower is better)
Translates to: VLAPYLVKHGKRKNT*MPVGVIYKKPKQNL
Trigger: TAAATTCTGCTTGGGTTTCTTATAAATAACTCCAACAGGCATTCATGTGTTTTTCCTCTTCCCATGTTTCACCAGGTAAGGTGCTAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR CCA 90 bp AAAGCTAATGTCCTACTCAAAGGAAATACATGTCTATTAAGCAGATaGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCA +
Preference number: 1 (lower is better)
Translates to: KANVLLKGNTCLLSR*SVVCRTLLALCFLA
Trigger: TGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGTATTTCCTTTGAGTAGGACATTAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CCA 90 bp CACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATaGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAAC +
Preference number: 1 (lower is better)
Translates to: HSSFDRFKHSVNCPS*VLKELKTSIFVPIN
Trigger: GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR CCA 90 bp CTAGAAACTATCCTAATCCAACACTCTTTCCTCCATACTAATGGATaGGAATTGCTTCTATCAATTTGTGCATTAGCAATCCACATCCTT +
Preference number: 1 (lower is better)
Translates to: LETILIQHSFLHTNG*ELLLSICALAIHIL
Trigger: AAGGATGTGGATTGCTAATGCACAAATTGATAGAAGCAATTCCCATCCATTAGTATGGAGGAAAGAGTGTTGGATTAGGATAGTTTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR GCA 90 bp GCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCGAGCCTACAGAACACTaGTCATGGATTAGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: AATTKCFPGTDSFTEALSEPTEH*SWISPL
Trigger: CAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTC...GGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR TCA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTGAGGACCTGCTTGTTTaGAATCATGTTCGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: QCKMCSPQPPELASEIPLEDLLV*NHVRGA
Trigger: AGCCCCTCGAACATGATTTCAAACAAGCAGGTCCTC...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CAA 90 bp ATGTCACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTaGCTGCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACA +
Preference number: 2 (lower is better)
Translates to: MSQSLQNTAHGLAPC*LLLSVQTPGKAFPT
Trigger: TGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR CCA 90 bp AATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGTCCCTTCCTATCCATaGGAAGGAAGCGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: NGQFISGTLGWNHKSAPWVPSYP*EGSGVG
Trigger: GCCAACTCCGCTTCCTTCCCATGGATAGGAAGGGAC...CCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR CAA 90 bp AAAGATGTCACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTaGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: KDVTEPTEHCSWISP*FAAPFGTDAWEGFS
Trigger: GGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGTGACATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR CCA 90 bp ATCTGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGTCCCTTCCTATCCATaGGAAGGAAGCGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: IWPLERTKAYNETPQIVPVPSYP*EGSGVG
Trigger: GCCAACTCCGCTTCCTTCCCATGGATAGGAAGGGAC...TGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR CCA 90 bp TGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGATGTCCCTTCCTATCCATaGGAAGGAAGCGGAGTTGGC +
Preference number: 2 (lower is better)
Translates to: WPLERTKAYNETPQIVPDVPSYP*EGSGVG
Trigger: GCCAACTCCGCTTCCTTCCCATGGATAGGAAGGGAC...ATCTGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR CCA 90 bp AATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGTTCGGTACAGACGCCTaGGAAGGCTTTTCCCACACA +
Preference number: 2 (lower is better)
Translates to: NGQFISGTLGWNHKSAPWFGTDA*EGFSHT
Trigger: TGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAA...CCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR CAA 90 bp TCAGTAGTGAGTTTAGGATGGCTTTCCTGCTCCCCTGCATCACCCTaGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTG +
Preference number: 2 (lower is better)
Translates to: SVVSLGWLSCSPASP*QCLIQKGAHVKLPL
Trigger: CAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAAACTCACTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp AAAGAGGCGCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATATGCCCAAGAGACTGCTaGTTTATAGGTTCACCGGGC +
Preference number: 2 (lower is better)
Translates to: KEALLMVSSFQERSAGTICPRDC*FIGSPG
Trigger: GCCCGGTGAACCTATAAATCAGCAGTCTCTTGGGCA...TATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGCGCCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR GCA 90 bp CAAACACATATGTGGCTGAGGTGGAATAAGCAGCACGTTGTCCCAAAAACACACCATGTTCGAGGGGCTTaGTCCTCTGCCCAAGAGACT +
Preference number: 2 (lower is better)
Translates to: QTHMWLRWNKQHVVPKTHHVRGA*SSAQET
Trigger: AGTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATG...GTGTGTTTTTGGGACAACGTGCTGCTTATTCCACCTCAGCCACATATGTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR GCA 90 bp GGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCATGTTCGAGGGGCTTaGTCCTCTGCCCAAGAGACT +
Preference number: 2 (lower is better)
Translates to: GQWYVEPYWHCVFWQWKIHVRGA*SSAQET
Trigger: AGTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATG...AATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CCA 90 bp GCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTGTCTATTAAGCAGATaGTCAGTGGTATGTAGAACC +
Preference number: 2 (lower is better)
Translates to: AATTKCFPGTDSFTEALSCLLSR*SVVCRT
Trigger: GGTTCTACATACCACTGACCATCTGCTTAATAGACA...GGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp CCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAATGCCCAAGAGACTGCTaGTTTATAGGTTCACCGGGC +
Preference number: 2 (lower is better)
Translates to: PLQCLIQKGAHVKLPLRKCPRDC*FIGSPG
Trigger: GCCCGGTGAACCTATAAATCAGCAGTCTCTTGGGCA...TTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp AGGATGGCTTTCCTGCTCCCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGAAACACATATGTGGCTaGGGTGGAATAAGCAGCACG +
Preference number: 2 (lower is better)
Translates to: RMAFLLPCITLAVFNTKGKHICG*GGISST
Trigger: CGTGCTGCTTATTCCACCTCAGCCACATATGTGTTT...CCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp AGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTAGCAGCATGCACAGAATaGCTGAAAACGCTGGCAATA +
Preference number: 2 (lower is better)
Translates to: SLQNTAHGLAPCLLLLSVAACTE*LKTLAI
Trigger: TATTGCCAGCGTTTTCAGTCATTCTGTGCATGCTGC...TACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR TCA 90 bp CAAACACATATGTGGCTGAGGTGGAATAAGCAGCACGTTGTCCCAAAAACACACATGCTTCCCTGGGACTaGTTCATTCACAGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: QTHMWLRWNKQHVVPKTHMLPWD*FIHRGL
Trigger: AAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCAT...GTGTGTTTTTGGGACAACGTGCTGCTTATTCCACCTCAGCCACATATGTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp GGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTGAGGACCTGCTTGTTTaGAATCATGTTCGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: GQWYVEPYWHCVFWQWKIEDLLV*NHVRGA
Trigger: AGCCCCTCGAACATGATTTCAAACAAGCAGGTCCTC...AATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp GTTCACTTTCAAGGTGCCATCAAGAAGGCTAGGCCACTAAGAAGTCACAAGCCCCTGCTGATCCTACAATaGAAACACTTAGTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: VHFQGAIKKARPLRSHKPLLILQ*KHLVPA
Trigger: AGCTGGCACTAAGTGTTTTCATTGTAGGATCAGCAG...GGGCTTGTGACTTCTTAGTGGCCTAGCCTTCTTGATGGCACCTTGAAAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR GCA 90 bp GCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCCTAATGGATGGGAATTaGTTCTATCAATTTGTGCAT +
Preference number: 2 (lower is better)
Translates to: AATTKCFPGTDSFTEALSLMDGN*FYQFVH
Trigger: ATGCACAAATTGATAGAAGCAATTCCCATCCATTAG...GGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR CCA 90 bp GTTCACTTTCAAGGTGCCATCAAGAAGGCTAGGCCACTAAGAAGTCACAAGCCCACAGAACACTGCTCATaGATTAGCCCCTTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: VHFQGAIKKARPLRSHKPTEHCS*ISPLFA
Trigger: AGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGT...GGGCTTGTGACTTCTTAGTGGCCTAGCCTTCTTGATGGCACCTTGAAAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR-3UTR CCA 90 bp TTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCATCAGGAACGCTCGGCTaGAACCATAAAAGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: LQCLIQKGAHVKLPLRKPSGTLG*NHKSAP
Trigger: CGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGA...TGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CCA 90 bp AAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCACACAAACACATATGTaGCTGAGGTGGAATAAGCAG +
Preference number: 2 (lower is better)
Translates to: KGCTCQAAAEKTRFQTGATQTHM*LRWNKQ
Trigger: CTGCTTATTCCACCTCAGCCACATATGTGTTTGTGT...GGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp CCCAGGAACAGTCCACAGTGGTGTGATAATAATCTAAGTGGCCAGATGATAGTAATGCTTCCCTGGGACTaGTTCATTCACAGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: PRNSPQWCDNNLSGQMIVMLPWD*FIHRGL
Trigger: AAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCAT...TACTATCATCTGGCCACTTAGATTATTATCACACCACTGTGGACTGTTCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR GCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTAAACAGTGCAAAATGTaGAGCCCACAGCCTCCGGAG +
Preference number: 2 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCKQCKM*SPQPPE
Trigger: CTCCGGAGGCTGTGGGCTGCACATTTTGCACTGTTT...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CAA 90 bp TACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTTTaGACAGGTTTAAGCATTCTGTCAACTGTCCATCATGGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: YRRLGRLFPHKITHL*TGLSILSTVHHGFS
Trigger: TGAGAACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR TCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTCAGAGACTAAGGACGTaGGATGAGAGAAGAGGACCT +
Preference number: 2 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCQRLRT*DERRGP
Trigger: AGGTCCTCTTCTCTCATCTCACGTCCTTAGTCTCTG...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp GGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTGCTGATCCTACAATaGAAACACTTAGTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GQWYVEPYWHCVFWQWKILLILQ*KHLVPA
Trigger: AGCTGGCACTAAGTGTTTTCATTGTAGGATCAGCAG...AATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp AGGATGGCTTTCCTGCTCCCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGGATAGAAATGGACACTaGAGTGTAAAATGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: RMAFLLPCITLAVFNTKGDRNGH*SVKWKG
Trigger: TCCCTTCCATTTTACACTTCAGTGTCCATTTCTATC...CCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR GCA 90 bp CAAGCCCAACCTAGACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTCAGCTGAAGCGTGGATaGTTGTCTATCAGCAACATA +
Preference number: 2 (lower is better)
Translates to: QAQPRHRSLLRHLSSLTVQLKRG*LSISNI
Trigger: TATGTTGCTGATAGACAAGCATCCACGCTTCAGCTG...AACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGTCTAGGTTGGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CCA 90 bp CACTTAAGGCTTTACTTTAGCAGCATCAGGGTAACCTATCAAAGAGGCGCTGTTCACAATAAACTCATCTaGCCCCTGGAGAGAACCAAG +
Preference number: 2 (lower is better)
Translates to: HLRLYFSSIRVTYQRGAVHNKLI*PLERTK
Trigger: CTTGGTTCTCTCCAGGGGCCAGATGAGTTTATTGTG...AACAGCGCCTCTTTGATAGGTTACCCTGATGCTGCTAAAGTAAAGCCTTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR-3UTR CCA 90 bp AAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCAGGAACAGTCCACAGTaGTGTGATAATAATCTAAGT +
Preference number: 2 (lower is better)
Translates to: KGCTCQAAAEKTRFQTGARNSPQ*CDNNLS
Trigger: ACTTAGATTATTATCACACCACTGTGGACTGTTCCT...GGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp CCGGAGTTGGCTTCAGAAATCCCCCTTAATGTTGCTAGACCAGTTACATTAAATAAACACATATGTGGCTaGGGTGGAATAAGCAGCACG +
Preference number: 2 (lower is better)
Translates to: PELASEIPLNVARPVTLNKHICG*GGISST
Trigger: CGTGCTGCTTATTCCACCTCAGCCACATATGTGTTT...ATTTAATGTAACTGGTCTAGCAACATTAAGGGGGATTTCTGAAGCCAACTCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR GCA 90 bp GTTCACTTTCAAGGTGCCATCAAGAAGGCTAGGCCACTAAGAAGTCACAAGCCCTGGCTCTACTTTTACTaGCTCAGTATAAAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: VHFQGAIKKARPLRSHKPWLYFY*LSIKVS
Trigger: AGAGACTTTTATACTGAGGCAGTAAAAGTAGAGCCA...GGGCTTGTGACTTCTTAGTGGCCTAGCCTTCTTGATGGCACCTTGAAAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR CCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTCATATGTGGCTGAGGTaGAATAAGCAGCACGTTGTC +
Preference number: 2 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCHMWLR*NKQHVV
Trigger: GACAACGTGCTGCTTATTCCACCTCAGCCACATATG...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR GCA 90 bp GAATTGCTTCTATCAATTTGTGCATTAGCAATCCACATCCTTCTCAAGTTCAGGGAGCCTACAGAACACTaGTCATGGATTAGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: ELLLSICALAIHILLKFREPTEH*SWISPL
Trigger: CAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTC...CCTGAACTTGAGAAGGATGTGGATTGCTAATGCACAAATTGATAGAAGCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR CCA 90 bp ACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTCAGTCTTTAACCTGACAGAACACTGCTCATaGATTAGCCCCTTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: TSQPLKTFVFTNRSVFNLTEHCS*ISPLFA
Trigger: AGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGT...CAGGTTAAAGACTGAACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR-3UTR CCA 90 bp TGCAAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTTCAGGAACGCTCGGCTaGAACCATAAAAGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: CKKFILVTADIHRNILNRSGTLG*NHKSAP
Trigger: CGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGA...ACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp CTTAAGCAACCTCTACTTTTCAAAATGGAAGGTACCAGAATATGGCTACAATTATGCCCAAGAGACTGCTaGTTTATAGGTTCACCGGGC +
Preference number: 2 (lower is better)
Translates to: LKQPLLFKMEGTRIWLQLCPRDC*FIGSPG
Trigger: GCCCGGTGAACCTATAAATCAGCAGTCTCTTGGGCA...TAATTGTAGCCATATTCTGGTACCTTCCATTTTGAAAAGTAGAGGTTGCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR TCA 90 bp CCACAGGAACATACTGAATCGTACTCAGTAGTGAGTTTAGGATGGCTTTCCTGCACTGTCTTTTCAAGATaGGACAACTTAGCATCAATC +
Preference number: 2 (lower is better)
Translates to: PQEHTESYSVVSLGWLSCTVFSR*DNLASI
Trigger: GATTGATGCTAAGTTGTCTCATCTTGAAAAGACAGT...GCAGGAAAGCCATCCTAAACTCACTACTGAGTACGATTCAGTATGTTCCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR TCA 90 bp GGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTAACTTTAATTCTAGATaGATATTCAGCTCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: GQWYVEPYWHCVFWQWKINFNSR*IFSSGP
Trigger: TGGCCCAGAGCTGAATATTCATCTAGAATTAAAGTT...AATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR CCA 90 bp CACTTAAGGCTTTACTTTAGCAGCATCAGGGTAACCTATCAAAGAGGCGCTGTTGTCAACTGTCCATCATaGGTTCTCAAGGAACTTAAA +
Preference number: 2 (lower is better)
Translates to: HLRLYFSSIRVTYQRGAVVNCPS*VLKELK
Trigger: TTTAAGTTCCTTGAGAACCCATGATGGACAGTTGAC...AACAGCGCCTCTTTGATAGGTTACCCTGATGCTGCTAAAGTAAAGCCTTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR-3UTR CCA 90 bp GTGCAAGTTAAGTGGGAAGATGTCACTCAACTCCTCAAAGTTCATACCAGAATAGTGACTGGAAAGGAATaGCTCTACTTTTACTGCCTC +
Preference number: 2 (lower is better)
Translates to: VQVKWEDVTQLLKVHTRIVTGKE*LYFYCL
Trigger: GAGGCAGTAAAAGTAGAGCCATTCCTTTCCAGTCAC...TATTCTGGTATGAACTTTGAGGAGTTGAGTGACATCTTCCCACTTAACTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR CCA 90 bp ACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTCAGTCTTTAACCTGTGTCTATTAAGCAGATaGTCAGTGGTATGTAGAACC +
Preference number: 2 (lower is better)
Translates to: TSQPLKTFVFTNRSVFNLCLLSR*SVVCRT
Trigger: GGTTCTACATACCACTGACCATCTGCTTAATAGACA...CAGGTTAAAGACTGAACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CAA 90 bp ACTATCCTAATCCAACACTCTTTCCTCCATACTAATGGATGGGAATaGCTTCTATCAATTTGTGCATTAGCAATCCACATCCTTCTCAAG +
Preference number: 2 (lower is better)
Translates to: TILIQHSFLHTNGWE*LLSICALAIHILLK
Trigger: CTTGAGAAGGATGTGGATTGCTAATGCACAAATTGATAGAAGCAATTCCCATCCATTAGTATGGAGGAAAGAGTGTTGGATTAGGATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR GCA 90 bp AAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTACTCAGATTCCAAACAGGTaGCTCAGGAAAAGTCTCTTA +
Preference number: 2 (lower is better)
Translates to: KKFILVTADIHRNILNRTQIPNR*LRKSLL
Trigger: TAAGAGACTTTTCCTGAGGCACCTGTTTGGAATCTG...AGTACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CCA 90 bp GGTACACTTGAAGACAACAATGACTTCATTCACCAAGGAAAACACTACTTAGCATGTGTTTTCTGGCAGTaGAAGATTCTAGTACAGAAA +
Preference number: 2 (lower is better)
Translates to: GTLEDNNDFIHQGKHYLACVFWQ*KILVQK
Trigger: TTTCTGTACTAGAATCTTCCACTGCCAGAAAACACA...TGCTAAGTAGTGTTTTCCTTGGTGAATGAAGTCATTGTTGTCTTCAAGTGTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CCA 90 bp TGCAAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTAGGAACAGTCCACAGTaGTGTGATAATAATCTAAGT +
Preference number: 2 (lower is better)
Translates to: CKKFILVTADIHRNILNRRNSPQ*CDNNLS
Trigger: ACTTAGATTATTATCACACCACTGTGGACTGTTCCT...ACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CAA 90 bp AAGATGAGACAACTTAGCATCAATCCATCTGGTCATCTTCTCTGTTaGAGTAGTTCATGTCTAATAAGAAGGAGAAATTCTCATAACTGT +
Preference number: 2 (lower is better)
Translates to: KMRQLSINPSGHLLC*SSSCLIRRRNSHNC
Trigger: ACAGTTATGAGAATTTCTCCTTCTTATTAGACATGAACTACTCAAACAGAGAAGATGACCAGATGGATTGATGCTAAGTTGTCTCATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR CAA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATGGATTAGCCCCTTGTTaGCTGCTCCTTTCGGTACAG +
Preference number: 3 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDGLAPC*LLLSVQ
Trigger: CTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCC...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR CAA 90 bp TATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGTCATGGATTAGCCCCTaGTTTGCTGCTCCTTTCGGT +
Preference number: 3 (lower is better)
Translates to: YRFTGQSSTAATTKCFPGSWISP*FAAPFG
Trigger: ACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGA...CCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR TCA 72 bp CTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTaGTTCATTCACAGAGGCCTTGTCCTTTCAAAGATT +
Preference number: 3 (lower is better)
Translates to: LHCRHHQMLPWD*FIHRGLVLSKI
Trigger: AATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.1
3UTR CCA 72 bp AGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTaGGAAGGCTTTTCCCACACAAGATCACTCATCTTT +
Preference number: 3 (lower is better)
Translates to: SPLFAAPFGTDA*EGFSHTRSLIF
Trigger: AAAGATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR CCA 72 bp GCATCAGTACCCCACTTTGCAGATGACCCTGAGACTTaGGAAAGTGACTCAGCTAGGGGTCACATGGCTATT +
Preference number: 3 (lower is better)
Translates to: ASVPHFADDPET*ESDSARGHMAI
Trigger: AATAGCCATGTGACCCCTAGCTGAGTCACTTTCCCAAGTCTCAGGGTCATCTGCAAAGTGGGGTACTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR-3UTR CAA 90 bp GAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGTATTGTAAGAAACATTTTTCATGTTCGAGGGGCTaGCTCCTCTGCCCAAGAGAC +
Preference number: 3 (lower is better)
Translates to: ERSAGTIKVLRGYCKKHFSCSRG*LLCPRD
Trigger: GTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATGA...AAAATGTTTCTTACAATACCCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CAA 90 bp GTTCACTTTCAAGGTGCCATCAAGAAGGCTAGGCCACTAAGAAGTCACAAGCCCAGAGGACCTGCTTGTTaGAAATCATGTTCGAGGGGC +
Preference number: 3 (lower is better)
Translates to: VHFQGAIKKARPLRSHKPRGPAC*KSCSRG
Trigger: GCCCCTCGAACATGATTTCAAACAAGCAGGTCCTCT...GGGCTTGTGACTTCTTAGTGGCCTAGCCTTCTTGATGGCACCTTGAAAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CAA 90 bp GTTCACTTTCAAGGTGCCATCAAGAAGGCTAGGCCACTAAGAAGTCACAAGCCCCATCAGTACCCCACTTaGCAGATGACCCTGAGACTT +
Preference number: 3 (lower is better)
Translates to: VHFQGAIKKARPLRSHKPHQYPT*QMTLRL
Trigger: AAGTCTCAGGGTCATCTGCAAAGTGGGGTACTGATG...GGGCTTGTGACTTCTTAGTGGCCTAGCCTTCTTGATGGCACCTTGAAAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR GCA 72 bp CCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGTaGACATGTCAAGCTGCCGCTGAGAAAACCAGATTC +
Preference number: 3 (lower is better)
Translates to: PCITLAVFNTKG*TCQAAAEKTRF
Trigger: GAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR GCA 72 bp CTCAGTAGTGAGTTTAGGATGGCTTTCCTGCTCCCCTaGATCACCCTTGCAGTGTTTAATACAAAAGGGTGC +
Preference number: 3 (lower is better)
Translates to: LSSEFRMAFLLP*ITLAVFNTKGC
Trigger: GCACCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAAACTCACTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CAA 90 bp CAAGCCCAACCTAGACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTAGAGGACCTGCTTGTTaGAAATCATGTTCGAGGGGC +
Preference number: 3 (lower is better)
Translates to: QAQPRHRSLLRHLSSLTVRGPAC*KSCSRG
Trigger: GCCCCTCGAACATGATTTCAAACAAGCAGGTCCTCT...AACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGTCTAGGTTGGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR TCA 72 bp CATCCAATCACCCAGACCATTAGGATCACAATGAGTTaGGACTGCAGGCTCTATACTGTGACATCTCGTCAG +
Preference number: 3 (lower is better)
Translates to: HPITQTIRITMS*DCRLYTVTSRQ
Trigger: CTGACGAGATGTCACAGTATAGAGCCTGCAGTCTCAACTCATTGTGATCCTAATGGTCTGGGTGATTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CAA 90 bp ATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGAAGATCACTCATCTTTaGACAGGTTTAAGCATTCTG +
Preference number: 3 (lower is better)
Translates to: MVSSFQERSAGTIKVLRGKITHL*TGLSIL
Trigger: CAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTT...CCCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR-3UTR CAA 90 bp CCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAATCATGGATTAGCCCCTaGTTTGCTGCTCCTTTCGGT +
Preference number: 3 (lower is better)
Translates to: PGTDSFTEALSFQRFHNKSWISP*FAAPFG
Trigger: ACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGA...TTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR-3UTR CAA 90 bp CCGGAGTTGGCTTCAGAAATCCCCCTTAATGTTGCTAGACCAGTTACATTAAATAGAGGACCTGCTTGTTaGAAATCATGTTCGAGGGGC +
Preference number: 3 (lower is better)
Translates to: PELASEIPLNVARPVTLNRGPAC*KSCSRG
Trigger: GCCCCTCGAACATGATTTCAAACAAGCAGGTCCTCT...ATTTAATGTAACTGGTCTAGCAACATTAAGGGGGATTTCTGAAGCCAACTCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CAA 90 bp CAAGCCCAACCTAGACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTTCCCCTGCATCACCCTaGCAGTGTTTAATACAAAAG +
Preference number: 3 (lower is better)
Translates to: QAQPRHRSLLRHLSSLTVSPASP*QCLIQK
Trigger: CTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGA...AACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGTCTAGGTTGGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR TCA 72 bp AACCGTTCAGTCTTTAACCTGCTGCTGATCCTACAATaGAAACACTTAGTGCCAGCTGAAGCGTGGATGCTT +
Preference number: 3 (lower is better)
Translates to: NRSVFNLLLILQ*KHLVPAEAWML
Trigger: AAGCATCCACGCTTCAGCTGGCACTAAGTGTTTTCATTGTAGGATCAGCAGCAGGTTAAAGACTGAACGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR GCA 72 bp GAATCGTACTCAGTAGTGAGTTTAGGATGGCTTTCCTaGTCCCCTGCATCACCCTTGCAGTGTTTAATACAA +
Preference number: 3 (lower is better)
Translates to: ESYSVVSLGWLS*SPASPLQCLIQ
Trigger: TTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAAACTCACTACTGAGTACGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CCA 72 bp GCCTTGTCCTTTCAAAGATTCCACAATAAACTCATCTaGCCCCTGGAGAGAACCAAGGCCTATAATGAAACC +
Preference number: 3 (lower is better)
Translates to: ALSFQRFHNKLI*PLERTKAYNET
Trigger: GGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGATGAGTTTATTGTGGAATCTTTGAAAGGACAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR TCA 72 bp GATCAATGGCTAGATAATCAGAGTTGGCTCTACAGCTaGCATTCAAAAGCACGACTACCAATTTCTGCCCAC +
Preference number: 3 (lower is better)
Translates to: DQWLDNQSWLYS*HSKARLPISAH
Trigger: GTGGGCAGAAATTGGTAGTCGTGCTTTTGAATGTCAGCTGTAGAGCCAACTCTGATTATCTAGCCATTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638807.1
3UTR CCA 72 bp CCTTTCAAAGATTCCACAATAAACTCATCTGGCCCCTaGAGAGAACCAAGGCCTATAATGAAACCCCTCAAA +
Preference number: 3 (lower is better)
Translates to: PFKDSTINSSGP*REPRPIMKPLK
Trigger: TTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGATGAGTTTATTGTGGAATCTTTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
3UTR CCA 72 bp CAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTaGCAGTGGAAGATTCTAGTACAGAAAATTGTCTCT +
Preference number: 3 (lower is better)
Translates to: QWYVEPYWHCVF*QWKILVQKIVS
Trigger: AGAGACAATTTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR-3UTR CAA 90 bp CACTTAAGGCTTTACTTTAGCAGCATCAGGGTAACCTATCAAAGAGGCGCTGTTAAGATCACTCATCTTTaGACAGGTTTAAGCATTCTG +
Preference number: 3 (lower is better)
Translates to: HLRLYFSSIRVTYQRGAVKITHL*TGLSIL
Trigger: CAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTT...AACAGCGCCTCTTTGATAGGTTACCCTGATGCTGCTAAAGTAAAGCCTTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000638807.1
3UTR CCA 72 bp TTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATaGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTG +
Preference number: 3 (lower is better)
Translates to: FDRFKHSVNCPS*VLKELKTSIFV
Trigger: CACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
CDS-3UTR TCA 90 bp GCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAAGGCGGAGCCCCGGGCGTaGCGGCAGGAGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: AHGLAPCLLLLSVQTPGKAEPRA*RQESPG
Trigger: TCCCGGAGACTCCTGCCGTCACGCCCGGGGCTCCGC...CTTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp TATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACCCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: YRFTGQSSTAATTKCFPGTLCPR*ARRGAG
Trigger: GCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGGT...CCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTACCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDYLCPR*ARRGAG
Trigger: GCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGTA...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478793.1
CDS-3UTR GCA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTATCCGGCAGTGCCATaGCCGGGCTGGTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDYPAVP*PGWSHQ
Trigger: CTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATA...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCCCACATATCCGGCAGTaGCATGCCCGGGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFPHIRQ*HARAGR
Trigger: GCGACCAGCCCGGGCATGGCACTGCCGGATATGTGG...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp TATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGGCTGGTCGCACCAGCTaGCACTTGGCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: YRFTGQSSTAATTKCFPGAGRTS*HLAHQS
Trigger: GGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGC...CCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTCCAACGCCTGCCCTCTaGCCGGAGGTGCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: QCKMCSPQPPELASEIPLPTPAL*PEVQLQ
Trigger: CTGCAGTTGCACCTCCGGCCAGAGGGCAGGCGTTGG...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478793.1
CDS-3UTR TCA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCGTAAGAACCGCCAGCTaGACGGGACCCACACGCCCT +
Preference number: 4 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCVRTAS*TGPTRP
Trigger: AGGGCGTGTGGGTCCCGTTCAGCTGGCGGTTCTTAC...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTCCCTCTGGCCGGAGGTaGAACTGCAGCCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QCKMCSPQPPELASEIPLPSGRR*NCSQRG
Trigger: GCCTCTTTGGCTGCAGTTGCACCTCCGGCCAGAGGG...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp GGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCTCAGTATCCGGCAGTGCCATaGCCGGGCTGGTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: GAHVKLPLRKPDSKQVPQYPAVP*PGWSHQ
Trigger: CTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATA...CTGAGGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCTTTGCACCTGCCCTCTaGCCGGAGGTGCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFFAPAL*PEVQLQ
Trigger: CTGCAGTTGCACCTCCGGCCAGAGGGCAGGTGCAAA...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR GCA 90 bp AAGATGTCACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTGCTGGCGTCTCCCGATCTCTaGTACGCGGAGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: KMSQSLQNTAHGLAPCLLASPDL*YAEPRA
Trigger: CGCCCGGGGCTCCGCGTAGCAGAGATCGGGAGACGC...CAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGTGACATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp AACACTGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGCCGGAGGTGCAACTaGAGCCAAAGAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: NTAHGLAPCLLLLSVQTPGRRCN*SQRGGG
Trigger: CCCTCCGCCTCTTTGGCTGCAGTTGCACCTCCGGCC...AGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGCCCCAGGGAACCCTTTaGTCTTCTCCTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: YRFTGQSSTAATTKCFPGPQGTL*SSPALF
Trigger: GAAAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGG...CCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp GCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAAGTGTCGGAGGGCCTGCTaGACTTCCCGCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: AHGLAPCLLLLSVQTPGKCRRAC*TSRSVT
Trigger: TGTGACTGAGCGGGAAGTCCAGCAGGCCCTCCGACA...CTTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp GCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTGCGTCTCCCGATCTCTaGTACGCGGAGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: AVNGQFISGTLGWNHKSAASPDL*YAEPRA
Trigger: CGCCCGGGGCTCCGCGTAGCAGAGATCGGGAGACGC...AGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCGGCACTCCAGCTGGCTaGTGCTTAGAGATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFGTPAG*CLEICH
Trigger: GTGACAGATCTCTAAGCAGCAGCCAGCTGGAGTGCC...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp TATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGCCTTTGGTCTTCTCCTaGCCTTTTCTGCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: YRFTGQSSTAATTKCFPGPLVFS*PFLLRH
Trigger: GTGCCTGAGCAGAAAAGGGCAGGAGAAGACCAAAGG...CCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCAGTCCTCCTTCGCTTTaGTGGGGCTTCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCSPPSL*WGFQLA
Trigger: TGCCAGCTGGAAGCCCCACCAAAGCGAAGGAGGACT...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR TCA 90 bp AGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTAGTAAGAACCGCCAGCTaGACGGGACCCACACGCCCT +
Preference number: 4 (lower is better)
Translates to: SLQNTAHGLAPCLLLLSVVRTAS*TGPTRP
Trigger: AGGGCGTGTGGGTCCCGTTCAGCTGGCGGTTCTTAC...TACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp TATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGGAGGACCTGCTTGTTTaGAATCATGTTCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: YRFTGQSSTAATTKCFPGEDLLV*NHVRGA
Trigger: AGCCCCTCGAACATGATTTCAAACAAGCAGGTCCTC...CCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp ACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAGGCCGGAGGTGCAACTaGAGCCAAAGAGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: TTKCFPGTDSFTEALSFQGRRCN*SQRGGG
Trigger: CCCTCCGCCTCTTTGGCTGCAGTTGCACCTCCGGCC...TTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp GCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCACTGCCCGACATGTCTaGCCCAGGGAACCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: APFGTDAWEGFSHTRSLITARHV*PREPFG
Trigger: ACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGT...GATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp ACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAACCACATATCCGGCAGTaGCATGCCCGGGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: TTKCFPGTDSFTEALSFQPHIRQ*HARAGR
Trigger: GCGACCAGCCCGGGCATGGCACTGCCGGATATGTGG...TTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCCATGTTCGAGGGGCTTaGTCCTCTGCCCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCHVRGA*SSAQET
Trigger: AGTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATG...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCAAACAGTGCAAAATGTaGAGCCCACAGCCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFKQCKM*SPQPPE
Trigger: CTCCGGAGGCTGTGGGCTGCACATTTTGCACTGTTT...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTCCCCAGGGAACCCTTTaGTCTTCTCCTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QCKMCSPQPPELASEIPLPQGTL*SSPALF
Trigger: GAAAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGG...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAAAGTCCTCCTTCGCTTTaGTGGGGCTTCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CSWISPLFAAPFGTDAWESPPSL*WGFQLA
Trigger: TGCCAGCTGGAAGCCCCACCAAAGCGAAGGAGGACT...TTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp AGGATGGCTTTCCTGCTCCCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGGCTGGTCGCACCAGCTaGCACTTGGCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: RMAFLLPCITLAVFNTKGAGRTS*HLAHQS
Trigger: GGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGC...CCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp GCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCCAGAGACTAAGGACGTaGGATGAGAGAAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: AATTKCFPGTDSFTEALSQRLRT*DERRGP
Trigger: AGGTCCTCTTCTCTCATCTCACGTCCTTAGTCTCTG...GGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTGTAGTAGTACCACAGTaGCAGCACAGGAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QCKMCSPQPPELASEIPLVVVPQ*QHRKGG
Trigger: ACCTCCCTTCCTGTGCTGGCACTGTGGTACTACTAC...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp GGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCTCAGGGCACTCCAGCTGGCTaGTGCTTAGAGATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GAHVKLPLRKPDSKQVPQGTPAG*CLEICH
Trigger: GTGACAGATCTCTAAGCAGCAGCCAGCTGGAGTGCC...CTGAGGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp GCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAAGCCTTTGGTCTTCTCCTaGCCTTTTCTGCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AHGLAPCLLLLSVQTPGKPLVFS*PFLLRH
Trigger: GTGCCTGAGCAGAAAAGGGCAGGAGAAGACCAAAGG...CTTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp TGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAAACGCCTCTCTCTCTCTaGTTAACCTCCAACGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSWISPLFAAPFGTDAWETPLSL*LTSNAL
Trigger: GAGGGCGTTGGAGGTTAAGCAGAGAGAGAGAGGCGT...TTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498275.5
CDS-3UTR CCA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATATTGCTGAGGTAGCCTaGATTCTTCTTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDIAEVA*ILLGSV
Trigger: CACAGAGCCAAGAAGAATCCAGGCTACCTCAGCAAT...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp TGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAATCTGTCACCGCTTGCTaGATTGCTGAGGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CSWISPLFAAPFGTDAWESVTAC*IAEVAW
Trigger: CCAGGCTACCTCAGCAATCCAGCAAGCGGTGACAGA...TTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTTTCCAGCTGGCATCTTaGAAGAGCCCTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QCKMCSPQPPELASEIPLFQLAS*KSPWGH
Trigger: ATGACCCCAAGGGCTCTTCCAAGATGCCAGCTGGAA...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTGGTGGGGCTTCCAGCTaGCATCTTGGAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: ATTKCFPGTDSFTEALSFGGASS*HLGRAL
Trigger: AAGGGCTCTTCCAAGATGCCAGCTGGAAGCCCCACC...AAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTCACAGCCTCCGGAGTTaGCTTCAGAAATCCCCCTTA +
Preference number: 4 (lower is better)
Translates to: QCKMCSPQPPELASEIPLHSLRS*LQKSPL
Trigger: TAAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTG...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
3UTR CAA 72 bp AGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTaGCTGCTCCTTTCGGTACAGACGCCTGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLQNTAHGLAPC*LLLSVQTPGKA
Trigger: AGCCTTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
CDS-3UTR GCA 90 bp CAAACACATATGTGGCTGAGGTGGAATAAGCAGCACGTTGTCCCAAAAACACACCCCTCTGGCCGGAGGTaGAACTGCAGCCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QTHMWLRWNKQHVVPKTHPSGRR*NCSQRG
Trigger: GCCTCTTTGGCTGCAGTTGCACCTCCGGCCAGAGGG...GTGTGTTTTTGGGACAACGTGCTGCTTATTCCACCTCAGCCACATATGTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp GGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCTCAGAGATCTGTCACCGCTTaGTGGATTGCTGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: GAHVKLPLRKPDSKQVPQRSVTA*WIAEVA
Trigger: GGCTACCTCAGCAATCCAGCAAGCGGTGACAGATCT...CTGAGGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCTATCCGGCAGTGCCATaGCCGGGCTGGTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFYPAVP*PGWSHQ
Trigger: CTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATA...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp GCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTACGCCTCTCTCTCTCTaGTTAACCTCCAACGCCTGC +
Preference number: 4 (lower is better)
Translates to: ATTKCFPGTDSFTEALSFTPLSL*LTSNAC
Trigger: GCAGGCGTTGGAGGTTAAGCAGAGAGAGAGAGGCGT...AAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478793.1
CDS-3UTR CCA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATAAACAAGTAGCCACGTaGTTCTTTTCCCCATTCCGA +
Preference number: 4 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDKQVAT*FFSPFR
Trigger: TCGGAATGGGGAAAAGAACCACGTGGCTACTTGTTT...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp AAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCCTCAGGCACTCCAGCTaGCTGCTGCTTAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: KGCTCQAAAEKTRFQTGALRHSS*LLLRDL
Trigger: CAGATCTCTAAGCAGCAGCCAGCTGGAGTGCCTGAG...GGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGATGCACCAGCTGGCACTTaGCACACCAGTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: WPLERTKAYNETPQIVPDAPAGT*HTSPPS
Trigger: CGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGC...ATCTGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAACTCATCTGGCCCCTGACCTCCAACGCCCTCTaGCCGGAGGTGCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: FTEALSFQRFHNKLIWPLTSNAL*PEVQLQ
Trigger: CTGCAGTTGCACCTCCGGCCAGAGGGCGTTGGAGGT...CAGGGGCCAGATGAGTTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498275.5
3UTR CAA 72 bp ACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTaGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TEPTEHCSWISP*FAAPFGTDAWE
Trigger: TTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.1
CDS-3UTR TCA 90 bp AAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTACTGCGGAGCCCCGGGCGTaGCGGCAGGAGTCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: KKFILVTADIHRNILNRTAEPRA*RQESPG
Trigger: TCCCGGAGACTCCTGCCGTCACGCCCGGGGCTCCGC...AGTACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR TCA 90 bp TGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGATAGTACCACACGCAGGTaGAGGACAGAGCCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: WPLERTKAYNETPQIVPDSTTRR*RTEPSC
Trigger: ACAGCTCGGCTCTGTCCTTCACCTGCGTGTGGTACT...ATCTGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp TACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAAATTGTCTCTACCCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: YWHCVFWQWKILVQKIVSTLCPR*ARRGAG
Trigger: GCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGGT...AGAGACAATTTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR TCA 90 bp TTCTTAAAGGAGGATCCTCTGGATCACCCTTCGGACATGGAAGAAGTTTGTAAAAGTCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: FLKEDPLDHPSDMEEVCKSLCPR*ARRGAG
Trigger: GCCGGCTCCTCTGCGGGCTCATCGTGGACACAGACT...TTTACAAACTTCTTCCATGTCCGAAGGGTGATCCAGAGGATCCTCCTTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496083.1
CDS-3UTR GCA 90 bp GGTACACTTGAAGACAACAATGACTTCATTCACCAAGGAAAACACTACTTAGCAGCGTCTCCCGATCTCTaGTACGCGGAGCCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GTLEDNNDFIHQGKHYLAASPDL*YAEPRA
Trigger: CGCCCGGGGCTCCGCGTAGCAGAGATCGGGAGACGC...TGCTAAGTAGTGTTTTCCTTGGTGAATGAAGTCATTGTTGTCTTCAAGTGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp ATCTGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGTCATGATTTGCACCTaGCCTCTGGCCGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IWPLERTKAYNETPQIVPVMICT*PLAGGA
Trigger: TGCACCTCCGGCCAGAGGGCAGGTGCAAATCATGAC...TGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR GCA 90 bp CCGGAGTTGGCTTCAGAAATCCCCCTTAATGTTGCTAGACCAGTTACATTAAATCCACATATCCGGCAGTaGCATGCCCGGGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: PELASEIPLNVARPVTLNPHIRQ*HARAGR
Trigger: GCGACCAGCCCGGGCATGGCACTGCCGGATATGTGG...ATTTAATGTAACTGGTCTAGCAACATTAAGGGGGATTTCTGAAGCCAACTCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp AACACTGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTTTCTCCTCACACAGATaGCACATATCCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NTAHGLAPCLLLLSVQTPFSSHR*HISGSA
Trigger: GGCACTGCCGGATATGTGGCATCTGTGTGAGGAGAA...AGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp GCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCAAACAAGTAGCCACGTaGTTCTTTTCCCCATTCCGA +
Preference number: 4 (lower is better)
Translates to: AATTKCFPGTDSFTEALSKQVAT*FFSPFR
Trigger: TCGGAATGGGGAAAAGAACCACGTGGCTACTTGTTT...GGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCAGCCTGGATTCTTCTTaGCTCTGTGCAAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCSLDSS*LCARLR
Trigger: TCTTAGCCTTGCACAGAGCCAAGAAGAATCCAGGCT...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp TGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGATGGTGGGGCTTCCAGCTaGCATCTTGGAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: WPLERTKAYNETPQIVPDGGASS*HLGRAL
Trigger: AAGGGCTCTTCCAAGATGCCAGCTGGAAGCCCCACC...ATCTGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp AAGATGTCACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTGCTGGGTGGGGCTTCCAGCTaGCATCTTGGAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KMSQSLQNTAHGLAPCLLGGASS*HLGRAL
Trigger: AAGGGCTCTTCCAAGATGCCAGCTGGAAGCCCCACC...CAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGTGACATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp GCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTGCACCAGCTGGCACTTaGCACACCAGTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: AVNGQFISGTLGWNHKSAAPAGT*HTSPPS
Trigger: CGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGC...AGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCCACAATAAACTCATCTaGCCCCTGGAGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCHNKLI*PLERTK
Trigger: CTTGGTTCTCTCCAGGGGCCAGATGAGTTTATTGTG...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp CTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTTTTTGCCCTTCTGTGTCATaGTTTGCACCTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSVQTPGKAFPTQDHSSFCPSVS*FAPALW
Trigger: CCAGAGGGCAGGTGCAAATCATGACACAGAAGGGCA...AAAAGATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR TCA 90 bp GCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCCTTTCCTTCTGTGAGTaGGGTAGTAGTACCACAGTG +
Preference number: 4 (lower is better)
Translates to: APFGTDAWEGFSHTRSLILSFCE*GSSTTV
Trigger: CACTGTGGTACTACTACCTCACTCACAGAAGGAAAG...GATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp GCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTTTGTTGTGCGATTGTTaGGACTGCCCGACATGTCTG +
Preference number: 4 (lower is better)
Translates to: ATTKCFPGTDSFTEALSFLLCDC*DCPTCL
Trigger: CAGACATGTCGGGCAGTCTCAACAATCGCACAACAA...AAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp CCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAACCCTCTGGCCGGAGGTaGAACTGCAGCCAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGTDSFTEALSFQRFHNKPSGRR*NCSQRG
Trigger: GCCTCTTTGGCTGCAGTTGCACCTCCGGCCAGAGGG...TTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATAGCCGAGCTGTAATTTaGATAAACTCCAGGACAATA +
Preference number: 4 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDSRAVI*INSRTI
Trigger: TATTGTCCTGGAGTTTATGCAAATTACAGCTCGGCT...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCTTCTGTCGGAGGGCCTaGTGGACTTCCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFFCRRA*WTSRSV
Trigger: GACTGAGCGGGAAGTCCAGCAGGCCCTCCGACAGAA...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp TCCTTCTTTATTCTTAAAGGAGGATCCTCTGGATCACCCTTCGGACATGGAAGATTCTGTCGGAGGGCCTaGTGGACTTCCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SFFILKGGSSGSPFGHGRFCRRA*WTSRSV
Trigger: GACTGAGCGGGAAGTCCAGCAGGCCCTCCGACAGAA...TCTTCCATGTCCGAAGGGTGATCCAGAGGATCCTCCTTTAAGAATAAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496083.1
CDS-3UTR GCA 90 bp GTTCACTTTCAAGGTGCCATCAAGAAGGCTAGGCCACTAAGAAGTCACAAGCCCGCTTTCCTGCTCCCCTaGATCACCCTTGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VHFQGAIKKARPLRSHKPAFLLP*ITLAVF
Trigger: AAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGC...GGGCTTGTGACTTCTTAGTGGCCTAGCCTTCTTGATGGCACCTTGAAAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGCACCAGCTGGCACTTaGCACACCAGTCCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: LQCLIQKGAHVKLPLRKPAPAGT*HTSPPS
Trigger: CGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGC...TGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTGCTGGTCGCACCAGCTaGCACTTGGCACACCAGTCC +
Preference number: 4 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCAGRTS*HLAHQS
Trigger: GGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGC...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TCCTTCTTTATTCTTAAAGGAGGATCCTCTGGATCACCCTTCGGACATGGAAGATGTCGGAGGGCCTGCTaGACTTCCCGCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: SFFILKGGSSGSPFGHGRCRRAC*TSRSVT
Trigger: TGTGACTGAGCGGGAAGTCCAGCAGGCCCTCCGACA...TCTTCCATGTCCGAAGGGTGATCCAGAGGATCCTCCTTTAAGAATAAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496083.1
CDS-3UTR CCA 90 bp ACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAGTCCCTTCCTATCCATaGGAAGGAAGCGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TTKCFPGTDSFTEALSFQVPSYP*EGSGVG
Trigger: GCCAACTCCGCTTCCTTCCCATGGATAGGAAGGGAC...TTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp ATCTGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCACGCTTGCTGGATTGCTaGGGTAGCCTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: IWPLERTKAYNETPQIVPRLLDC*GSLDSS
Trigger: AGAAGAATCCAGGCTACCTCAGCAATCCAGCAAGCG...TGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp AATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGTTGTTGTGCGATTGTTaGGACTGCCCGACATGTCTG +
Preference number: 4 (lower is better)
Translates to: NGQFISGTLGWNHKSAPWLLCDC*DCPTCL
Trigger: CAGACATGTCGGGCAGTCTCAACAATCGCACAACAA...CCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp GAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGTATTGTAAGAAACATTTTAGTACCACACGCAGGTaGAGGACAGAGCCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ERSAGTIKVLRGYCKKHFSTTRR*RTEPSC
Trigger: ACAGCTCGGCTCTGTCCTTCACCTGCGTGTGGTACT...AAAATGTTTCTTACAATACCCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp AGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGAGACTAAGGACGTaGGATGAGAGAAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: SLQNTAHGLAPCLLLLSVQRLRT*DERRGP
Trigger: AGGTCCTCTTCTCTCATCTCACGTCCTTAGTCTCTG...TACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCTCTTTAACCTGCTGCTaGTCCTACAATGAAAACACT +
Preference number: 4 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFSLTCC*SYNENT
Trigger: AGTGTTTTCATTGTAGGATCAGCAGCAGGTTAAAGA...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCACTGCCCGACATGTCTaGCCCAGGGAACCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFTARHV*PREPFG
Trigger: ACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGT...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR GCA 90 bp AAAGAGGCGCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATATTCTCCTCACACAGATaGCACATATCCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEALLMVSSFQERSAGTIFSSHR*HISGSA
Trigger: GGCACTGCCGGATATGTGGCATCTGTGTGAGGAGAA...TATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGCGCCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp CCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACATGTTCGAGGGGCTTaGTCCTCTGCCCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: PLQCLIQKGAHVKLPLRKHVRGA*SSAQET
Trigger: AGTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATG...TTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp TCACCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGATTAGGATGGCTTTCCTaGTCCCCTGCATCACCCTTG +
Preference number: 4 (lower is better)
Translates to: SPLQCLIQKGAHVKLPLRLGWLS*SPASPL
Trigger: CAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAA...TCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTAACCTCCAACGCCTaGCCTCTGGCCGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCLTSNA*PLAGGA
Trigger: TGCACCTCCGGCCAGAGGGCAGGCGTTGGAGGTTAA...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478793.1
CDS-3UTR CCA 90 bp GTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAATGTCGGAGGGCCTGCTaGACTTCCCGCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: VEPYWHCVFWQWKILVQKCRRAC*TSRSVT
Trigger: TGTGACTGAGCGGGAAGTCCAGCAGGCCCTCCGACA...TTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GTCAACTGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCATGTCGGAGGGCCTGCTaGACTTCCCGCTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: VNCPSWVLKELKTSIFVPCRRAC*TSRSVT
Trigger: TGTGACTGAGCGGGAAGTCCAGCAGGCCCTCCGACA...TGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACAGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp AAAGAGGCGCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAGGAAGGAAGCGGAGTTaGCTCATCCAAGTAACCCTG +
Preference number: 4 (lower is better)
Translates to: KEALLMVSSFQERSAGTIGRKRS*LIQVTL
Trigger: CAGGGTTACTTGGATGAGCCAACTCCGCTTCCTTCC...TATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGCGCCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CCA 90 bp CTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTTTTTTCGGTACAGACGCCTaGGAAGGCTTTTCCCACACA +
Preference number: 4 (lower is better)
Translates to: LSVQTPGKAFPTQDHSSFFGTDA*EGFSHT
Trigger: TGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAA...AAAAGATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTGTGTTTTCTGGCAGTaGAAGATTCTAGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDCVFWQ*KILVQK
Trigger: TTTCTGTACTAGAATCTTCCACTGCCAGAAAACACA...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCTGTCTATTAAGCAGATaGTCAGTGGTATGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFCLLSR*SVVCRT
Trigger: GGTTCTACATACCACTGACCATCTGCTTAATAGACA...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp AAGATGTCACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTGCTGTCCCATACACCGAGGTaGGCAAGAAGATCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: KMSQSLQNTAHGLAPCLLSHTPR*ARRSKG
Trigger: CCCTTTTGATCTTCTTGCTCACCTCGGTGTATGGGA...CAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGTGACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp TGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGATTCCCATACACCGAGGTaGGCAAGAAGATCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: WPLERTKAYNETPQIVPDSHTPR*ARRSKG
Trigger: CCCTTTTGATCTTCTTGCTCACCTCGGTGTATGGGA...ATCTGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp CCGGAGTTGGCTTCAGAAATCCCCCTTAATGTTGCTAGACCAGTTACATTAAATAGTACCACACGCAGGTaGAGGACAGAGCCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PELASEIPLNVARPVTLNSTTRR*RTEPSC
Trigger: ACAGCTCGGCTCTGTCCTTCACCTGCGTGTGGTACT...ATTTAATGTAACTGGTCTAGCAACATTAAGGGGGATTTCTGAAGCCAACTCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp CTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTTTTGAGGACCTGCTTGTTTaGAATCATGTTCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSVQTPGKAFPTQDHSSFEDLLV*NHVRGA
Trigger: AGCCCCTCGAACATGATTTCAAACAAGCAGGTCCTC...AAAAGATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp AAAGAGGCGCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAGAGGACCTGCTTGTTTaGAATCATGTTCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KEALLMVSSFQERSAGTIEDLLV*NHVRGA
Trigger: AGCCCCTCGAACATGATTTCAAACAAGCAGGTCCTC...TATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGCGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp ACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAACAGAGACTAAGGACGTaGGATGAGAGAAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: TTKCFPGTDSFTEALSFQQRLRT*DERRGP
Trigger: AGGTCCTCTTCTCTCATCTCACGTCCTTAGTCTCTG...TTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR TCA 90 bp AAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCTCCACAGGAACATACTaGATCGTACTCAGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: KGCTCQAAAEKTRFQTGASTGTY*IVLSSE
Trigger: CTCACTACTGAGTACGATTCAGTATGTTCCTGTGGA...GGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp TCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAGCAGGCTCTATACTGTaGCATCTCGTCAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLGLIHSQRPCPFKDSTIAGSIL*HLVSGS
Trigger: GGAGCCACTGACGAGATGTCACAGTATAGAGCCTGC...TATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCTTGCACCTGTCACCATaGGGCGTAAGAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFLHLSP*GVRSPQ
Trigger: CTGAGGGCTTCTTACGCCTCATGGTGACAGGTGCAA...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478793.1
CDS-3UTR GCA 90 bp TTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAACTCATCTGGCCCCTGAGATCTGTCACCGCTTaGTGGATTGCTGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: FTEALSFQRFHNKLIWPLRSVTA*WIAEVA
Trigger: GGCTACCTCAGCAATCCAGCAAGCGGTGACAGATCT...CAGGGGCCAGATGAGTTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp TTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGGCACTCCAGCTGGCTaGTGCTTAGAGATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LQCLIQKGAHVKLPLRKPGTPAG*CLEICH
Trigger: GTGACAGATCTCTAAGCAGCAGCCAGCTGGAGTGCC...TGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp CTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTTTTGAGCCTACAGAACACTaGTCATGGATTAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LSVQTPGKAFPTQDHSSFEPTEH*SWISPL
Trigger: CAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTC...AAAAGATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp GGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCTCAGCAGATTCCAAACAGGTaGCTCAGGAAAAGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: GAHVKLPLRKPDSKQVPQQIPNR*LRKSLL
Trigger: TAAGAGACTTTTCCTGAGGCACCTGTTTGGAATCTG...CTGAGGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp AAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCCAGCTGAAGCGTGGATaGTTGTCTATCAGCAACATA +
Preference number: 4 (lower is better)
Translates to: KGCTCQAAAEKTRFQTGAQLKRG*LSISNI
Trigger: TATGTTGCTGATAGACAAGCATCCACGCTTCAGCTG...GGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp CAAACACATATGTGGCTGAGGTGGAATAAGCAGCACGTTGTCCCAAAAACACACAAACAGTGCAAAATGTaGAGCCCACAGCCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QTHMWLRWNKQHVVPKTHKQCKM*SPQPPE
Trigger: CTCCGGAGGCTGTGGGCTGCACATTTTGCACTGTTT...GTGTGTTTTTGGGACAACGTGCTGCTTATTCCACCTCAGCCACATATGTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCTCTGTCACCGCTTGCTaGATTGCTGAGGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFSVTAC*IAEVAW
Trigger: CCAGGCTACCTCAGCAATCCAGCAAGCGGTGACAGA...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CCA 90 bp TTCGTGCCAATAAACCTGAATAATACACAGAGTCCCTTCCTATCCATGGGAAGGCTCAGGCACTCCAGCTaGCTGCTGCTTAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: FVPINLNNTQSPFLSMGRLRHSS*LLLRDL
Trigger: CAGATCTCTAAGCAGCAGCCAGCTGGAGTGCCTGAG...CCTTCCCATGGATAGGAAGGGACTCTGTGTATTATTCAGGTTTATTGGCACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCGTCAACTGTCCATCATaGGTTCTCAAGGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCVNCPS*VLKELK
Trigger: TTTAAGTTCCTTGAGAACCCATGATGGACAGTTGAC...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp AACACTGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTACAGAACACTGCTCATaGATTAGCCCCTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: NTAHGLAPCLLLLSVQTPTEHCS*ISPLFA
Trigger: AGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGT...AGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAAACACAAACACATATGTaGCTGAGGTGGAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: CSWISPLFAAPFGTDAWETQTHM*LRWNKQ
Trigger: CTGCTTATTCCACCTCAGCCACATATGTGTTTGTGT...TTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CCA 90 bp GCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTGGCACTGTGTTTTCTaGCAGTGGAAGATTCTAGTA +
Preference number: 4 (lower is better)
Translates to: APFGTDAWEGFSHTRSLIWHCVF*QWKILV
Trigger: TACTAGAATCTTCCACTGCCAGAAAACACAGTGCCA...GATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR TCA 90 bp CACTTAAGGCTTTACTTTAGCAGCATCAGGGTAACCTATCAAAGAGGCGCTGTTCGCTTGCTGGATTGCTaGGGTAGCCTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: HLRLYFSSIRVTYQRGAVRLLDC*GSLDSS
Trigger: AGAAGAATCCAGGCTACCTCAGCAATCCAGCAAGCG...AACAGCGCCTCTTTGATAGGTTACCCTGATGCTGCTAAAGTAAAGCCTTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp TTCGTGCCAATAAACCTGAATAATACACAGAGTCCCTTCCTATCCATGGGAAGGCGCTTGCTGGATTGCTaGGGTAGCCTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: FVPINLNNTQSPFLSMGRRLLDC*GSLDSS
Trigger: AGAAGAATCCAGGCTACCTCAGCAATCCAGCAAGCG...CCTTCCCATGGATAGGAAGGGACTCTGTGTATTATTCAGGTTTATTGGCACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp CCACAGGAACATACTGAATCGTACTCAGTAGTGAGTTTAGGATGGCTTTCCTGCTCCCATACACCGAGGTaGGCAAGAAGATCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: PQEHTESYSVVSLGWLSCSHTPR*ARRSKG
Trigger: CCCTTTTGATCTTCTTGCTCACCTCGGTGTATGGGA...GCAGGAAAGCCATCCTAAACTCACTACTGAGTACGATTCAGTATGTTCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp ATCACCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAACACATATGTGGCTaGGGTGGAATAAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: ITLAVFNTKGCTCQAAAEKHICG*GGISST
Trigger: CGTGCTGCTTATTCCACCTCAGCCACATATGTGTTT...CTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp ATCACCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGCCATTAGGATCACAATaGGTTGAGACTGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ITLAVFNTKGCTCQAAAEPLGSQ*VETAGS
Trigger: AGAGCCTGCAGTCTCAACTCATTGTGATCCTAATGG...CTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp TTCGTGCCAATAAACCTGAATAATACACAGAGTCCCTTCCTATCCATGGGAAGGTTCTCCTCACACAGATaGCACATATCCGGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FVPINLNNTQSPFLSMGRFSSHR*HISGSA
Trigger: GGCACTGCCGGATATGTGGCATCTGTGTGAGGAGAA...CCTTCCCATGGATAGGAAGGGACTCTGTGTATTATTCAGGTTTATTGGCACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp CTCATCTGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTGATGTAGGCCATGCCTaGTGTGATGATCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: LIWPLERTKAYNETPQIVDVGHA*CDDHRV
Trigger: TACTCTGTGATCATCACAGCAGGCATGGCCTACATC...AACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACTTCTGTCGGAGGGCCTaGTGGACTTCCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: CPSWVLKELKTSIFVPINFCRRA*WTSRSV
Trigger: GACTGAGCGGGAAGTCCAGCAGGCCCTCCGACAGAA...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp TCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAGCTTTCCTGCTCCCCTaGATCACCCTTGCAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLGLIHSQRPCPFKDSTIAFLLP*ITLAVF
Trigger: AAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGC...TATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp AATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGAAACAAGTAGCCACGTaGTTCTTTTCCCCATTCCGA +
Preference number: 4 (lower is better)
Translates to: NGQFISGTLGWNHKSAPWKQVAT*FFSPFR
Trigger: TCGGAATGGGGAAAAGAACCACGTGGCTACTTGTTT...CCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GGTACACTTGAAGACAACAATGACTTCATTCACCAAGGAAAACACTACTTAGCAGACCCACACGCCCTTTaGGGACCACTTCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GTLEDNNDFIHQGKHYLADPHAL*GPLPAG
Trigger: TCCTGCAGGAAGTGGTCCCCAAAGGGCGTGTGGGTC...TGCTAAGTAGTGTTTTCCTTGGTGAATGAAGTCATTGTTGTCTTCAAGTGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp ATCACCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGATTGCTGAGGTAGCCTaGATTCTTCTTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ITLAVFNTKGCTCQAAAEIAEVA*ILLGSV
Trigger: CACAGAGCCAAGAAGAATCCAGGCTACCTCAGCAAT...CTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAACCCCAGGGAACCCTTTaGTCTTCTCCTGCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VEPYWHCVFWQWKILVQKPQGTL*SSPALF
Trigger: GAAAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGG...TTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCATTCCAGCTGGCATCTTaGAAGAGCCCTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LQCLIQKGAHVKLPLRKPFQLAS*KSPWGH
Trigger: ATGACCCCAAGGGCTCTTCCAAGATGCCAGCTGGAA...TGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATGGGTTAGTCCTCCTTCGCTTTaGTGGGGCTTCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: DHSSFDRFKHSVNCPSWVSPPSL*WGFQLA
Trigger: TGCCAGCTGGAAGCCCCACCAAAGCGAAGGAGGACT...AACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATATTCGGTACAGACGCCTaGGAAGGCTTTTCCCACACA +
Preference number: 4 (lower is better)
Translates to: SLGLIHSQRPCPFKDSTIFGTDA*EGFSHT
Trigger: TGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAA...TATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTGTGTTTTCTGGCAGTaGAAGATTCTAGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCCVFWQ*KILVQK
Trigger: TTTCTGTACTAGAATCTTCCACTGCCAGAAAACACA...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp ATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGGTGACATCTCGTCAGTaGCTCCATCTTAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: MVSSFQERSAGTIKVLRGVTSRQ*LHLKKY
Trigger: GTATTTCTTAAGATGGAGCCACTGACGAGATGTCAC...CCCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCACACAGCCTCCGGAGTTaGCTTCAGAAATCCCCCTTA +
Preference number: 4 (lower is better)
Translates to: LQCLIQKGAHVKLPLRKPHSLRS*LQKSPL
Trigger: TAAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTG...TGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTGCCCAAGAGACTGCTaGTTTATAGGTTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCCPRDC*FIGSPG
Trigger: GCCCGGTGAACCTATAAATCAGCAGTCTCTTGGGCA...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCACTAAGGACGTGAGATaGGAGAAGAGGACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFTKDVR*EKRTCL
Trigger: CAAGCAGGTCCTCTTCTCTCATCTCACGTCCTTAGT...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR TCA 90 bp ACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATGGGTTCTCAGCAGGCTCTATACTGTaGCATCTCGTCAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: THLLTGLSILSTVHHGFSAGSIL*HLVSGS
Trigger: GGAGCCACTGACGAGATGTCACAGTATAGAGCCTGC...TGAGAACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR TCA 90 bp CACTTAAGGCTTTACTTTAGCAGCATCAGGGTAACCTATCAAAGAGGCGCTGTTTGCCCTTCTGTGTCATaGTTTGCACCTGTCACCATG +
Preference number: 4 (lower is better)
Translates to: HLRLYFSSIRVTYQRGAVCPSVS*FAPVTM
Trigger: CATGGTGACAGGTGCAAATCATGACACAGAAGGGCA...AACAGCGCCTCTTTGATAGGTTACCCTGATGCTGCTAAAGTAAAGCCTTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478793.1
CDS-3UTR GCA 90 bp TGCAAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTTTCTGTCGGAGGGCCTaGTGGACTTCCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: CKKFILVTADIHRNILNRFCRRA*WTSRSV
Trigger: GACTGAGCGGGAAGTCCAGCAGGCCCTCCGACAGAA...ACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp TTCGTGCCAATAAACCTGAATAATACACAGAGTCCCTTCCTATCCATGGGAAGGGAGCCTACAGAACACTaGTCATGGATTAGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: FVPINLNNTQSPFLSMGREPTEH*SWISPL
Trigger: CAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTC...CCTTCCCATGGATAGGAAGGGACTCTGTGTATTATTCAGGTTTATTGGCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp GAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGTATTGTAAGAAACATTTTTCTTGGAAGAGCCCTTaGGGTCATCCTTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ERSAGTIKVLRGYCKKHFSWKSP*GHPLLC
Trigger: GCACAACAAAGGATGACCCCAAGGGCTCTTCCAAGA...AAAATGTTTCTTACAATACCCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TTCGTGCCAATAAACCTGAATAATACACAGAGTCCCTTCCTATCCATGGGAAGGTCTTGGAAGAGCCCTTaGGGTCATCCTTTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: FVPINLNNTQSPFLSMGRSWKSP*GHPLLC
Trigger: GCACAACAAAGGATGACCCCAAGGGCTCTTCCAAGA...CCTTCCCATGGATAGGAAGGGACTCTGTGTATTATTCAGGTTTATTGGCACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAAATTGTCTCTGTCCCTTCCTATCCATaGGAAGGAAGCGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: YWHCVFWQWKILVQKIVSVPSYP*EGSGVG
Trigger: GCCAACTCCGCTTCCTTCCCATGGATAGGAAGGGAC...AGAGACAATTTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CCA 90 bp ACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAACAGAACACTGCTCATaGATTAGCCCCTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TTKCFPGTDSFTEALSFQTEHCS*ISPLFA
Trigger: AGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGT...TTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTCAGGAACGCTCGGCTaGAACCATAAAAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCSGTLG*NHKSAP
Trigger: CGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGA...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp AATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGACACAAACACATATGTaGCTGAGGTGGAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: NGQFISGTLGWNHKSAPWTQTHM*LRWNKQ
Trigger: CTGCTTATTCCACCTCAGCCACATATGTGTTTGTGT...CCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp AAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCTGTCTATTAAGCAGATaGTCAGTGGTATGTAGAACC +
Preference number: 4 (lower is better)
Translates to: KGCTCQAAAEKTRFQTGACLLSR*SVVCRT
Trigger: GGTTCTACATACCACTGACCATCTGCTTAATAGACA...GGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp AGGATGGCTTTCCTGCTCCCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGGTGACATCTCGTCAGTaGCTCCATCTTAAGAAATAC +
Preference number: 4 (lower is better)
Translates to: RMAFLLPCITLAVFNTKGVTSRQ*LHLKKY
Trigger: GTATTTCTTAAGATGGAGCCACTGACGAGATGTCAC...CCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
3UTR CAA 72 bp AGTTTAGGATGGCTTTCCTGCTCCCCTGCATCACCCTaGCAGTGTTTAATACAAAAGGGTGCACATGTCAAG +
Preference number: 4 (lower is better)
Translates to: SLGWLSCSPASP*QCLIQKGAHVK
Trigger: CTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
3UTR CAA 72 bp CAAGCCCAACCTAGACATCGCAGCCTCTTAAGACATTaGTCTTCACTAACCGTTCAGTCTTTAACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QAQPRHRSLLRH*SSLTVQSLTCC
Trigger: GCAGCAGGTTAAAGACTGAACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGTCTAGGTTGGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000638807.1
CDS-3UTR TCA 90 bp TCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATACTTTCCTTCTGTGAGTaGGGTAGTAGTACCACAGTG +
Preference number: 4 (lower is better)
Translates to: SLGLIHSQRPCPFKDSTILSFCE*GSSTTV
Trigger: CACTGTGGTACTACTACCTCACTCACAGAAGGAAAG...TATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR TCA 90 bp GTCAACTGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATGCTTCCCTGGGACTaGTTCATTCACAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VNCPSWVLKELKTSIFVPMLPWD*FIHRGL
Trigger: AAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCAT...TGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp CCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAAATGCTTCCCTGGGACTaGTTCATTCACAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGTDSFTEALSFQRFHNKMLPWD*FIHRGL
Trigger: AAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCAT...TTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR TCA 90 bp TACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAAATTGTCTCTTGCCCAAGAGACTGCTaGTTTATAGGTTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: YWHCVFWQWKILVQKIVSCPRDC*FIGSPG
Trigger: GCCCGGTGAACCTATAAATCAGCAGTCTCTTGGGCA...AGAGACAATTTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTACTAAGGACGTGAGATaGGAGAAGAGGACCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCTKDVR*EKRTCL
Trigger: CAAGCAGGTCCTCTTCTCTCATCTCACGTCCTTAGT...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp TCACCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGATTCTTCTTGGCTCTGTaGAAGGCTAAGAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: SPLQCLIQKGAHVKLPLRFFLAL*KAKSIR
Trigger: TCTGATACTCTTAGCCTTGCACAGAGCCAAGAAGAA...TCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp CTCATCTGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTTTCTTCTTGGCTCTGTaGAAGGCTAAGAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: LIWPLERTKAYNETPQIVFFLAL*KAKSIR
Trigger: TCTGATACTCTTAGCCTTGCACAGAGCCAAGAAGAA...AACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp TACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAAATTGTCTCTCCTTTGGTCTTCTCCTaGCCTTTTCTGCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: YWHCVFWQWKILVQKIVSPLVFS*PFLLRH
Trigger: GTGCCTGAGCAGAAAAGGGCAGGAGAAGACCAAAGG...AGAGACAATTTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp CTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTTTTTTTAATACAAAAGGGTaGACATGTCAAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LSVQTPGKAFPTQDHSSFFNTKG*TCQAAA
Trigger: AGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAA...AAAAGATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CCA 90 bp CATTCTGTCAACTGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCCTCAGGCACTCCAGCTaGCTGCTGCTTAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: HSVNCPSWVLKELKTSIFLRHSS*LLLRDL
Trigger: CAGATCTCTAAGCAGCAGCCAGCTGGAGTGCCTGAG...GAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACAGTTGACAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TTCCCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCTTCCAGCTGGCATCTTaGAAGAGCCCTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FPHKITHLLTGLSILSTVFQLAS*KSPWGH
Trigger: ATGACCCCAAGGGCTCTTCCAAGATGCCAGCTGGAA...GACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATACACAATAAACTCATCTaGCCCCTGGAGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: SLGLIHSQRPCPFKDSTIHNKLI*PLERTK
Trigger: CTTGGTTCTCTCCAGGGGCCAGATGAGTTTATTGTG...TATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp ACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTCAGTCTTTAACCTGGTGCCAGCTGAAGCGTaGATGCTTGTCTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: TSQPLKTFVFTNRSVFNLVPAEA*MLVYQQ
Trigger: TTGCTGATAGACAAGCATCCACGCTTCAGCTGGCAC...CAGGTTAAAGACTGAACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp CCTTCTTTATTCTTAAAGGAGGATCCTCTGGATCACCCTTCGGACATGGAAGAAAGACTTCCAGGTACCTaGAAGGTACCACGAGCTATA +
Preference number: 4 (lower is better)
Translates to: PSLFLKEDPLDHPSDMEERLPGT*KVPRAI
Trigger: TATAGCTCGTGGTACCTTCCAGGTACCTGGAAGTCT...TTCTTCCATGTCCGAAGGGTGATCCAGAGGATCCTCCTTTAAGAATAAAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496083.1
CDS-3UTR TCA 90 bp CCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATTTGTTGTGCGATTGTTaGGACTGCCCGACATGTCTG +
Preference number: 4 (lower is better)
Translates to: PHKITHLLTGLSILSTVHLLCDC*DCPTCL
Trigger: CAGACATGTCGGGCAGTCTCAACAATCGCACAACAA...ATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp AAGATGTCACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTGCTGAATAGAAAAGAGCTGTaGAGACACTTCTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: KMSQSLQNTAHGLAPCLLNRKEL*RHFCLY
Trigger: GTAGAGACAGAAGTGTCTTCACAGCTCTTTTCTATT...CAGCAAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGTGACATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACTGCCCAAGAGACTGCTaGTTTATAGGTTCACCGGGC +
Preference number: 4 (lower is better)
Translates to: CPSWVLKELKTSIFVPINCPRDC*FIGSPG
Trigger: GCCCGGTGAACCTATAAATCAGCAGTCTCTTGGGCA...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp CCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAAAAACACATATGTGGCTaGGGTGGAATAAGCAGCACG +
Preference number: 4 (lower is better)
Translates to: PGTDSFTEALSFQRFHNKKHICG*GGISST
Trigger: CGTGCTGCTTATTCCACCTCAGCCACATATGTGTTT...TTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACGTAGTAGTACCACAGTaGCAGCACAGGAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: CPSWVLKELKTSIFVPINVVVPQ*QHRKGG
Trigger: ACCTCCCTTCCTGTGCTGGCACTGTGGTACTACTAC...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACAGATCTGTCACCGCTTaGTGGATTGCTGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: CPSWVLKELKTSIFVPINRSVTA*WIAEVA
Trigger: GGCTACCTCAGCAATCCAGCAAGCGGTGACAGATCT...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp AAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTACTACTGCCCGACATGTCTaGCCCAGGGAACCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KKFILVTADIHRNILNRTTARHV*PREPFG
Trigger: ACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGT...AGTACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp CCGGAGTTGGCTTCAGAAATCCCCCTTAATGTTGCTAGACCAGTTACATTAAATTTCTGTGTCATGATTTaGACCTGTCACCATGAGGCG +
Preference number: 4 (lower is better)
Translates to: PELASEIPLNVARPVTLNFCVMI*TCHHEA
Trigger: CGCCTCATGGTGACAGGTGCAAATCATGACACAGAA...ATTTAATGTAACTGGTCTAGCAACATTAAGGGGGATTTCTGAAGCCAACTCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478793.1
CDS-3UTR CCA 90 bp GTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAAAGCCTGGATTCTTCTTaGCTCTGTGCAAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: VEPYWHCVFWQWKILVQKSLDSS*LCARLR
Trigger: TCTTAGCCTTGCACAGAGCCAAGAAGAATCCAGGCT...TTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp GTCAACTGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAAGCCTGGATTCTTCTTaGCTCTGTGCAAGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: VNCPSWVLKELKTSIFVPSLDSS*LCARLR
Trigger: TCTTAGCCTTGCACAGAGCCAAGAAGAATCCAGGCT...TGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACAGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TGCAAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTTCTGTCACCGCTTGCTaGATTGCTGAGGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CKKFILVTADIHRNILNRSVTAC*IAEVAW
Trigger: CCAGGCTACCTCAGCAATCCAGCAAGCGGTGACAGA...ACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACGGAAGGAAGCGGAGTTaGCTCATCCAAGTAACCCTG +
Preference number: 4 (lower is better)
Translates to: CPSWVLKELKTSIFVPINGRKRS*LIQVTL
Trigger: CAGGGTTACTTGGATGAGCCAACTCCGCTTCCTTCC...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp AGGATGGCTTTCCTGCTCCCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGAGGAACAGTCCACAGTaGTGTGATAATAATCTAAGT +
Preference number: 4 (lower is better)
Translates to: RMAFLLPCITLAVFNTKGRNSPQ*CDNNLS
Trigger: ACTTAGATTATTATCACACCACTGTGGACTGTTCCT...CCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACTCAGGAACGCTCGGCTaGAACCATAAAAGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: CPSWVLKELKTSIFVPINSGTLG*NHKSAP
Trigger: CGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGA...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR TCA 90 bp ATCACCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAATGCTTGATGATTTaGTTCTCCAACGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: ITLAVFNTKGCTCQAAAEKCLMI*FSNAAI
Trigger: AATAGCTGCGTTGGAGAATCAAATCATCAAGCATTT...CTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACATGCTTCCCTGGGACTaGTTCATTCACAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CPSWVLKELKTSIFVPINMLPWD*FIHRGL
Trigger: AAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCAT...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp GTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAACTGCTGATCCTACAATaGAAACACTTAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VEPYWHCVFWQWKILVQKLLILQ*KHLVPA
Trigger: AGCTGGCACTAAGTGTTTTCATTGTAGGATCAGCAG...TTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp TTCCCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCCATTAGGATCACAATaGGTTGAGACTGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FPHKITHLLTGLSILSTVPLGSQ*VETAGS
Trigger: AGAGCCTGCAGTCTCAACTCATTGTGATCCTAATGG...GACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR GCA 90 bp GATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATGGGTTGATGTAGGCCATGCCTaGTGTGATGATCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: DHSSFDRFKHSVNCPSWVDVGHA*CDDHRV
Trigger: TACTCTGTGATCATCACAGCAGGCATGGCCTACATC...AACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp CTTAAGCAACCTCTACTTTTCAAAATGGAAGGTACCAGAATATGGCTACAATTACATGTTCGAGGGGCTTaGTCCTCTGCCCAAGAGACT +
Preference number: 4 (lower is better)
Translates to: LKQPLLFKMEGTRIWLQLHVRGA*SSAQET
Trigger: AGTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATG...TAATTGTAGCCATATTCTGGTACCTTCCATTTTGAAAAGTAGAGGTTGCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp CCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATATGTGGCTGAGGTaGAATAAGCAGCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: PHKITHLLTGLSILSTVHHMWLR*NKQHVV
Trigger: GACAACGTGCTGCTTATTCCACCTCAGCCACATATG...ATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR TCA 90 bp TCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAATAGAAAAGAGCTGTaGAGACACTTCTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SLGLIHSQRPCPFKDSTINRKEL*RHFCLY
Trigger: GTAGAGACAGAAGTGTCTTCACAGCTCTTTTCTATT...TATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR TCA 90 bp CACTTAAGGCTTTACTTTAGCAGCATCAGGGTAACCTATCAAAGAGGCGCTGTTAATAGAAAAGAGCTGTaGAGACACTTCTGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: HLRLYFSSIRVTYQRGAVNRKEL*RHFCLY
Trigger: GTAGAGACAGAAGTGTCTTCACAGCTCTTTTCTATT...AACAGCGCCTCTTTGATAGGTTACCCTGATGCTGCTAAAGTAAAGCCTTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp AAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTACTTTAGGATGGCTTTCCTaGTCCCCTGCATCACCCTTG +
Preference number: 4 (lower is better)
Translates to: KKFILVTADIHRNILNRTLGWLS*SPASPL
Trigger: CAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCTAA...AGTACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp ACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTCAGTCTTTAACCTGTGGCACTGTGTTTTCTaGCAGTGGAAGATTCTAGTA +
Preference number: 4 (lower is better)
Translates to: TSQPLKTFVFTNRSVFNLWHCVF*QWKILV
Trigger: TACTAGAATCTTCCACTGCCAGAAAACACAGTGCCA...CAGGTTAAAGACTGAACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp CAGATGGTACACTTGAAGACAACAATGACTTCATTCACCAAGGAAAACACTACTTCCACAGGAACATACTaGATCGTACTCAGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: QMVHLKTTMTSFTKENTTSTGTY*IVLSSE
Trigger: CTCACTACTGAGTACGATTCAGTATGTTCCTGTGGA...AGTAGTGTTTTCCTTGGTGAATGAAGTCATTGTTGTCTTCAAGTGTACCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp GATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATGGGTTTTCTTCTTGGCTCTGTaGAAGGCTAAGAGTATCAGA +
Preference number: 4 (lower is better)
Translates to: DHSSFDRFKHSVNCPSWVFFLAL*KAKSIR
Trigger: TCTGATACTCTTAGCCTTGCACAGAGCCAAGAAGAA...AACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp TGCAAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTCATATGTGGCTGAGGTaGAATAAGCAGCACGTTGTC +
Preference number: 4 (lower is better)
Translates to: CKKFILVTADIHRNILNRHMWLR*NKQHVV
Trigger: GACAACGTGCTGCTTATTCCACCTCAGCCACATATG...ACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp AAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTACTGTGCCAGCTGAAGCGTaGATGCTTGTCTATCAGCAA +
Preference number: 4 (lower is better)
Translates to: KKFILVTADIHRNILNRTVPAEA*MLVYQQ
Trigger: TTGCTGATAGACAAGCATCCACGCTTCAGCTGGCAC...AGTACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TTTTCCTTCTTTATTCTTAAAGGAGGATCCTCTGGATCACCCTTCGGACATGGACAGCAATCAGATACTTaGTCCTTGAGTAAGACAAGT +
Preference number: 4 (lower is better)
Translates to: FSFFILKGGSSGSPFGHGQQSDT*SLSKTS
Trigger: ACTTGTCTTACTCAAGGACCAAGTATCTGATTGCTG...TCCATGTCCGAAGGGTGATCCAGAGGATCCTCCTTTAAGAATAAAGAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496083.1
CDS-3UTR GCA 90 bp CTTAAGCAACCTCTACTTTTCAAAATGGAAGGTACCAGAATATGGCTACAATTAGATGTAGGCCATGCCTaGTGTGATGATCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: LKQPLLFKMEGTRIWLQLDVGHA*CDDHRV
Trigger: TACTCTGTGATCATCACAGCAGGCATGGCCTACATC...TAATTGTAGCCATATTCTGGTACCTTCCATTTTGAAAAGTAGAGGTTGCTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp AAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTACTATTGCTGAGGTAGCCTaGATTCTTCTTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KKFILVTADIHRNILNRTIAEVA*ILLGSV
Trigger: CACAGAGCCAAGAAGAATCCAGGCTACCTCAGCAAT...AGTACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp CCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATGTCAACTGTCCATCATaGGTTCTCAAGGAACTTAAA +
Preference number: 4 (lower is better)
Translates to: PHKITHLLTGLSILSTVHVNCPS*VLKELK
Trigger: TTTAAGTTCCTTGAGAACCCATGATGGACAGTTGAC...ATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CCA 90 bp ACATGTCTATTAAGCAGATGGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTAGGAACAGTCCACAGTaGTGTGATAATAATCTAAGT +
Preference number: 4 (lower is better)
Translates to: TCLLSRWSVVCRTLLALCRNSPQ*CDNNLS
Trigger: ACTTAGATTATTATCACACCACTGTGGACTGTTCCT...ACACAGTGCCAGTAAGGTTCTACATACCACTGACCATCTGCTTAATAGACATGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp ACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATGGGTTCTCAAAATGCTTGATGATTTaGTTCTCCAACGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: THLLTGLSILSTVHHGFSKCLMI*FSNAAI
Trigger: AATAGCTGCGTTGGAGAATCAAATCATCAAGCATTT...TGAGAACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR TCA 90 bp TTCCCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCAAATGCTTGATGATTTaGTTCTCCAACGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: FPHKITHLLTGLSILSTVKCLMI*FSNAAI
Trigger: AATAGCTGCGTTGGAGAATCAAATCATCAAGCATTT...GACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR GCA 90 bp TGCAAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTCAGATTCCAAACAGGTaGCTCAGGAAAAGTCTCTTA +
Preference number: 4 (lower is better)
Translates to: CKKFILVTADIHRNILNRQIPNR*LRKSLL
Trigger: TAAGAGACTTTTCCTGAGGCACCTGTTTGGAATCTG...ACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CCA 90 bp TTTATTCTTAAAGGAGGATCCTCTGGATCACCCTTCGGACATGGAAGAAGTTTGATCACCCTTCGGACATaGAAGAAGTTTGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: FILKGGSSGSPFGHGRSLITLRT*KKFVKF
Trigger: AAATTTTACAAACTTCTTCCATGTCCGAAGGGTGAT...CAAACTTCTTCCATGTCCGAAGGGTGATCCAGAGGATCCTCCTTTAAGAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496083.1
CDS-3UTR GCA 90 bp TGCAAGAAATTTATATTAGTCACAGCAGACATCCACAGGAACATACTGAATCGTAGCCGAGCTGTAATTTaGATAAACTCCAGGACAATA +
Preference number: 4 (lower is better)
Translates to: CKKFILVTADIHRNILNRSRAVI*INSRTI
Trigger: TATTGTCCTGGAGTTTATGCAAATTACAGCTCGGCT...ACGATTCAGTATGTTCCTGTGGATGTCTGCTGTGACTAATATAAATTTCTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR GCA 90 bp CTTAAGCAACCTCTACTTTTCAAAATGGAAGGTACCAGAATATGGCTACAATTATTTAATACAAAAGGGTaGACATGTCAAGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LKQPLLFKMEGTRIWLQLFNTKG*TCQAAA
Trigger: AGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAA...TAATTGTAGCCATATTCTGGTACCTTCCATTTTGAAAAGTAGAGGTTGCTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR TCA 90 bp CTTAAGCAACCTCTACTTTTCAAAATGGAAGGTACCAGAATATGGCTACAATTATCTTTAACCTGCTGCTaGTCCTACAATGAAAACACT +
Preference number: 4 (lower is better)
Translates to: LKQPLLFKMEGTRIWLQLSLTCC*SYNENT
Trigger: AGTGTTTTCATTGTAGGATCAGCAGCAGGTTAAAGA...TAATTGTAGCCATATTCTGGTACCTTCCATTTTGAAAAGTAGAGGTTGCTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
3UTR CAA 72 bp CAACTTAGCATCAATCCATCTGGTCATCTTCTCTGTTaGAGTAGTTCATGTCTAATAAGAAGGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: QLSINPSGHLLC*SSSCLIRRRNS
Trigger: AGAATTTCTCCTTCTTATTAGACATGAACTACTCAAACAGAGAAGATGACCAGATGGATTGATGCTAAGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638807.1
CDS TCA 90 bp GGCACAGACGCGTCTCCCGATCTCTGCTACGCGGAGCCCCGGGCGTaGCGGCAGGAGTCTCCGGGACCCGGGCTCCGCTCGGCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: GTDASPDLCYAEPRA*RQESPGPGLRSAAP
Trigger: GGGAGCGGCCGAGCGGAGCCCGGGTCCCGGAGACTCCTGCCGTCACGCCCGGGGCTCCGCGTAGCAGAGATCGGGAGACGCGTCTGTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.2
CDS GCA 90 bp CCGCCTGGCCACACAGGGGGCTCCAGGGTTCTTGGAGGTCTGAGCTaGCTTCACCGCCCCTTCCCAGCCTGGGCAGGCGCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PPGHTGGSRVLGGLS*LHRPFPAWAGAVWA
Trigger: TGCCCAGACGGCGCCTGCCCAGGCTGGGAAGGGGCGGTGAAGGCAGCTCAGACCTCCAAGAACCCTGGAGCCCCCTGTGTGGCCAGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491556.1
CDS CCA 90 bp CCTCTGGCCGGAGGTGCAACTGCAGCCAAAGAGGCGGAGGGGAGATaGGTCGGCTTCCCCGGAGGCACAGACGCGTCTCCCGATCTCTGC +
Preference number: 5 (lower is better)
Translates to: PLAGGATAAKEAEGR*VGFPGGTDASPDLC
Trigger: GCAGAGATCGGGAGACGCGTCTGTGCCTCCGGGGAAGCCGACCCATCTCCCCTCCGCCTCTTTGGCTGCAGTTGCACCTCCGGCCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CCA 90 bp AGGGTTCTTGGAGGTCTGAGCTGCCTTCACCGCCCCTTCCCAGCCTaGGCAGGCGCCGTCTGGGCACCAGCCGTTCCTATGGCGACAGCC +
Preference number: 5 (lower is better)
Translates to: RVLGGLSCLHRPFPA*AGAVWAPAVPMATA
Trigger: GGCTGTCGCCATAGGAACGGCTGGTGCCCAGACGGCGCCTGCCCAGGCTGGGAAGGGGCGGTGAAGGCAGCTCAGACCTCCAAGAACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491556.1
CDS TCA 90 bp GCCAGTTCCGCAGGAAGCCCCTATTGTACTGGCCTGTGTCCACGATaGGCCCGCAGAGGAGCCGGCGCCCAGTCTTCTGTCGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: ASSAGSPYCTGLCPR*ARRGAGAQSSVGGP
Trigger: AGGCCCTCCGACAGAAGACTGGGCGCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CCA 90 bp ATATCCGGCAGTGCCATGCCCGGGCTGGTCGCACCAGCTGGCACTTaGCACACCAGTCCTCCTTCGCTTTGGTGGGGCTTCCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ISGSAMPGLVAPAGT*HTSPPSLWWGFQLA
Trigger: TGCCAGCTGGAAGCCCCACCAAAGCGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CCA 90 bp AGGGTGGAGAACTGGTGCCAGTTCCGCAGGAAGCCCCTATTGTACTaGCCTGTGTCCACGATGAGCCCGCAGAGGAGCCGGCGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: RVENWCQFRRKPLLY*PVSTMSPQRSRRPV
Trigger: GACTGGGCGCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS GCA 90 bp CTTCTGTGTCATGATTTGCACCTGCCCTCTGGCCGGAGGTGCAACTaGAGCCAAAGAGGCGGAGGGGAGATGGGTCGGCTTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: LLCHDLHLPSGRRCN*SQRGGGEMGRLPRR
Trigger: CCTCCGGGGAAGCCGACCCATCTCCCCTCCGCCTCTTTGGCTGCAGTTGCACCTCCGGCCAGAGGGCAGGTGCAAATCATGACACAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS GCA 90 bp TCGGCAGGGTGGTGGAATGCACGTGTGCCCAGGGTGGAGAACTGGTaGCAGTTCCGCAGGAAGCCCCTATTGTACTGGCCTGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: SAGWWNARVPRVENW*QFRRKPLLYWPVST
Trigger: CGTGGACACAGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCACACGTGCATTCCACCACCCTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CCA 90 bp TCCTCGGCAGGGTGGTGGAATGCACGTGTGCCCAGGGTGGAGAACTaGTGCCAGTTCCGCAGGAAGCCCCTATTGTACTGGCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SSAGWWNARVPRVEN*CQFRRKPLLYWPVS
Trigger: GGACACAGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCACACGTGCATTCCACCACCCTGCCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CCA 90 bp TCTCCTCACACAGATGCCACATATCCGGCAGTGCCATGCCCGGGCTaGTCGCACCAGCTGGCACTTGGCACACCAGTCCTCCTTCGCTTT +
Preference number: 5 (lower is better)
Translates to: SPHTDATYPAVPCPG*SHQLALGTPVLLRF
Trigger: AAAGCGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATATGTGGCATCTGTGTGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 90 bp AGGCACTTCAGACAATGTCCTCGGCAGGGTGGTGGAATGCACGTGTaGCCAGGGTGGAGAACTGGTGCCAGTTCCGCAGGAAGCCCCTAT +
Preference number: 5 (lower is better)
Translates to: RHFRQCPRQGGGMHV*PGWRTGASSAGSPY
Trigger: ATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCACACGTGCATTCCACCACCCTGCCGAGGACATTGTCTGAAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CCA 90 bp AGACAATGTCCTCGGCAGGGTGGTGGAATGCACGTGTGCCCAGGGTaGAGAACTGGTGCCAGTTCCGCAGGAAGCCCCTATTGTACTGGC +
Preference number: 5 (lower is better)
Translates to: RQCPRQGGGMHVCPG*RTGASSAGSPYCTG
Trigger: GCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCACACGTGCATTCCACCACCCTGCCGAGGACATTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS GCA 90 bp CACATAGAAGGCACTTCAGACAATGTCCTCGGCAGGGTGGTGGAATaGACGTGTGCCCAGGGTGGAGAACTGGTGCCAGTTCCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: HIEGTSDNVLGRVVE*TCAQGGELVPVPQE
Trigger: TTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCACACGTGCATTCCACCACCCTGCCGAGGACATTGTCTGAAGTGCCTTCTATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CCA 90 bp GCACTTGGCACACCAGTCCTCCTTCGCTTTGGTGGGGCTTCCAGCTaGCATCTTGGAAGAGCCCTTGGGGTCATCCTTTGTTGTGCGATT +
Preference number: 5 (lower is better)
Translates to: ALGTPVLLRFGGASS*HLGRALGVILCCAI
Trigger: AATCGCACAACAAAGGATGACCCCAAGGGCTCTTCCAAGATGCCAGCTGGAAGCCCCACCAAAGCGAAGGAGGACTGGTGTGCCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 90 bp GGGGTCATCCTTTGTTGTGCGATTGTTGAGACTGCCCGACATGTCTaGCCCAGGGAACCCTTTGGTCTTCTCCTGCCCTTTTCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: GVILCCAIVETARHV*PREPFGLLLPFSAQ
Trigger: CTGAGCAGAAAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAGGATGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS-3UTR CAA 90 bp ATCTGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGGACCCACACGCCCTTaGGGGACCACTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IWPLERTKAYNETPQIVPGPTRP*GTTSCR
Trigger: CCTGCAGGAAGTGGTCCCCAAAGGGCGTGTGGGTCC...TGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp TTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCCTTTGTTGTGCGATaGTTGAGACTGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: FTGQSSTAATTKCFPGTDSFVVR*LRLPDM
Trigger: CATGTCGGGCAGTCTCAACAATCGCACAACAAAGGA...ATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CAA 90 bp GCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTCATGTTCGAGGGGCTaGCTCCTCTGCCCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: APFGTDAWEGFSHTRSLISCSRG*LLCPRD
Trigger: GTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATGA...GATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS TCA 90 bp GCATCTTGGAAGAGCCCTTGGGGTCATCCTTTGTTGTGCGATTGTTaGGACTGCCCGACATGTCTGCCCCAGGGAACCCTTTGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: ASWKSPWGHPLLCDC*DCPTCLPQGTLWSS
Trigger: AGAAGACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAGGATGACCCCAAGGGCTCTTCCAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 90 bp CAGGGTCTGTTCTTTCCTTCTGTGAGTGAGGTAGTAGTACCACAGTaGCAGCACAGGAAGGGAGGTCAAAACCACCACCCCCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: QGLFFPSVSEVVVPQ*QHRKGGQNHHPQEE
Trigger: TTCCTCCTGGGGGTGGTGGTTTTGACCTCCCTTCCTGTGCTGGCACTGTGGTACTACTACCTCACTCACAGAAGGAAAGAACAGACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS-3UTR CAA 90 bp CCACAGGAACATACTGAATCGTACTCAGTAGTGAGTTTAGGATGGCTTTCCTGCGGACCCACACGCCCTTaGGGGACCACTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PQEHTESYSVVSLGWLSCGPTRP*GTTSCR
Trigger: CCTGCAGGAAGTGGTCCCCAAAGGGCGTGTGGGTCC...GCAGGAAAGCCATCCTAAACTCACTACTGAGTACGATTCAGTATGTTCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp CAAGCCCAACCTAGACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTGGACCCACACGCCCTTaGGGGACCACTTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QAQPRHRSLLRHLSSLTVGPTRP*GTTSCR
Trigger: CCTGCAGGAAGTGGTCCCCAAAGGGCGTGTGGGTCC...AACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGTCTAGGTTGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCATCTTGGAAGAGCCCTaGGGGTCATCCTTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFILEEP*GSSFVV
Trigger: CACAACAAAGGATGACCCCAAGGGCTCTTCCAAGAT...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CAA 90 bp AAAGAGGCGCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATACGCACCAGCTGGCACTaGGCACACCAGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KEALLMVSSFQERSAGTIRTSWH*AHQSSF
Trigger: GAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCG...TATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGCGCCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS TCA 90 bp CCAGCTGGCTGCTGCTTAGAGATCTGTCACCGCTTGCTGGATTGCTaGGGTAGCCTGGATTCTTCTTGGCTCTGTGCAAGGCTAAGAGTA +
Preference number: 5 (lower is better)
Translates to: PAGCCLEICHRLLDC*GSLDSSWLCARLRV
Trigger: TACTCTTAGCCTTGCACAGAGCCAAGAAGAATCCAGGCTACCTCAGCAATCCAGCAAGCGGTGACAGATCTCTAAGCAGCAGCCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 90 bp GTAGCTGATGTTGATCAGCTGGATCAGGAAGATGTAGGCCATGCCTaGTGTGATGATCACAGAGTACCACACGCAGGTGAAGGACAGAGC +
Preference number: 5 (lower is better)
Translates to: VADVDQLDQEDVGHA*CDDHRVPHAGEGQS
Trigger: GCTCTGTCCTTCACCTGCGTGTGGTACTCTGTGATCATCACAGCAGGCATGGCCTACATCTTCCTGATCCAGCTGATCAACATCAGCTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000488129.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 90 bp AATGCCCCAACAAGCAGTATCCCTGACCCACAAAACTGGAGAAATTaGCACCGGGAACATAACAGTTTAGGGCTAGGGACAGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: NAPTSSIPDPQNWRN*HREHNSLGLGTGPQ
Trigger: CTGTGGCCCTGTCCCTAGCCCTAAACTGTTATGTTCCCGGTGGCAATTTCTCCAGTTTTGTGGGTCAGGGATACTGCTTGTTGGGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS-3UTR CAA 90 bp GCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCATCTTGGAAGAGCCCTaGGGGTCATCCTTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: APFGTDAWEGFSHTRSLIILEEP*GSSFVV
Trigger: CACAACAAAGGATGACCCCAAGGGCTCTTCCAAGAT...GATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCGCACCAGCTGGCACTaGGCACACCAGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFRTSWH*AHQSSF
Trigger: GAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCG...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CAA 90 bp GGGCAATCCTCCACTGCCGCCACCACCAAATGCTTCCCTGGGACTGATTCATTCTCCCCTGCATCACCCTaGCAGTGTTTAATACAAAAG +
Preference number: 5 (lower is better)
Translates to: GQSSTAATTKCFPGTDSFSPASP*QCLIQK
Trigger: CTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGA...GAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGCGGCAGTGGAGGATTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp GGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTGCCCCAGGGAACCCTTaGGTCTTCTCCTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: GQWYVEPYWHCVFWQWKIAPGNP*VFSCPF
Trigger: AAAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGGC...AATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp TGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTGGGAATTTGTTGTGCGATTGTaGAGACTGCCCGACATGTCT +
Preference number: 5 (lower is better)
Translates to: CSWISPLFAAPFGTDAWEFVVRL*RLPDMS
Trigger: AGACATGTCGGGCAGTCTCAACAATCGCACAACAAA...TTCCCAGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp TGCTGCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTTTTGTTGTGCGATTGTaGAGACTGCCCGACATGTCT +
Preference number: 5 (lower is better)
Translates to: CCSFRYRRLGRLFPHKITFVVRL*RLPDMS
Trigger: AGACATGTCGGGCAGTCTCAACAATCGCACAACAAA...AGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp GTCAACTGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCACGCACCAGCTGGCACTaGGCACACCAGTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VNCPSWVLKELKTSIFVPRTSWH*AHQSSF
Trigger: GAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCG...TGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACAGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp CTGCTGATTTATAGGTTCACCGGGCAATCCTCCACTGCCGCCACCACCAAATGCCCCTTCATCCAGATCTaGACAATCACACAAACAAGT +
Preference number: 5 (lower is better)
Translates to: LLIYRFTGQSSTAATTKCPFIQI*TITQTS
Trigger: ACTTGTTTGTGTGATTGTCAAGATCTGGATGAAGGG...GCATTTGGTGGTGGCGGCAGTGGAGGATTGCCCGGTGAACCTATAAATCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CAA 90 bp CACTTAAGGCTTTACTTTAGCAGCATCAGGGTAACCTATCAAAGAGGCGCTGTTGCCCCAGGGAACCCTTaGGTCTTCTCCTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: HLRLYFSSIRVTYQRGAVAPGNP*VFSCPF
Trigger: AAAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGGC...AACAGCGCCTCTTTGATAGGTTACCCTGATGCTGCTAAAGTAAAGCCTTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCGCCCCAGGGAACCCTTaGGTCTTCTCCTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFAPGNP*VFSCPF
Trigger: AAAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGGC...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CAA 90 bp TGGCCCCTGGAGAGAACCAAGGCCTATAATGAAACCCCTCAAATAGTTCCAGATGGATTAGCCCCTTGTTaGCTGCTCCTTTCGGTACAG +
Preference number: 5 (lower is better)
Translates to: WPLERTKAYNETPQIVPDGLAPC*LLLSVQ
Trigger: CTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCC...ATCTGGAACTATTTGAGGGGTTTCATTATAGGCCTTGGTTCTCTCCAGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp TTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCATCATGTTCGAGGGGCTaGCTCCTCTGCCCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: LQCLIQKGAHVKLPLRKPSCSRG*LLCPRD
Trigger: GTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATGA...TGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp CAGTGCAAAATGTGCAGCCCACAGCCTCCGGAGTTGGCTTCAGAAATCCCCCTTAGGCAGATGGTACACTaGAAGACAACAATGACTTCA +
Preference number: 5 (lower is better)
Translates to: QCKMCSPQPPELASEIPLRQMVH*KTTMTS
Trigger: TGAAGTCATTGTTGTCTTCAAGTGTACCATCTGCCT...AAGGGGGATTTCTGAAGCCAACTCCGGAGGCTGTGGGCTGCACATTTTGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp GCTCCTTTCGGTACAGACGCCTGGGAAGGCTTTTCCCACACAAGATCACTCATCTCCCCTGCATCACCCTaGCAGTGTTTAATACAAAAG +
Preference number: 5 (lower is better)
Translates to: APFGTDAWEGFSHTRSLISPASP*QCLIQK
Trigger: CTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGA...GATGAGTGATCTTGTGTGGGAAAAGCCTTCCCAGGCGTCTGTACCGAAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CAA 90 bp ATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGGAGCCGAGCTGTAATTaGCATAAACTCCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: MVSSFQERSAGTIKVLRGEPSCN*HKLQDN
Trigger: ATTGTCCTGGAGTTTATGCAAATTACAGCTCGGCTC...CCCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp GCCACCACCAAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTGAGCCGAGCTGTAATTaGCATAAACTCCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: ATTKCFPGTDSFTEALSFEPSCN*HKLQDN
Trigger: ATTGTCCTGGAGTTTATGCAAATTACAGCTCGGCTC...AAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTTGGTGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CAA 90 bp CCGGAGTTGGCTTCAGAAATCCCCCTTAATGTTGCTAGACCAGTTACATTAAATTCATGTTCGAGGGGCTaGCTCCTCTGCCCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: PELASEIPLNVARPVTLNSCSRG*LLCPRD
Trigger: GTCTCTTGGGCAGAGGAGCAAGCCCCTCGAACATGA...ATTTAATGTAACTGGTCTAGCAACATTAAGGGGGATTTCTGAAGCCAACTCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp AAAGAGGCGCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAGAGGACCTGCTTGTTaGAAATCATGTTCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: KEALLMVSSFQERSAGTIRGPAC*KSCSRG
Trigger: GCCCCTCGAACATGATTTCAAACAAGCAGGTCCTCT...TATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGCGCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp GGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGATTCCAAACAGGTGCCTCAGCTGAAGCGTGGATGCTaGTCTATCAGCAACATAATT +
Preference number: 5 (lower is better)
Translates to: GAHVKLPLRKPDSKQVPQLKRGC*SISNII
Trigger: AATTATGTTGCTGATAGACAAGCATCCACGCTTCAG...CTGAGGCACCTGTTTGGAATCTGGTTTTCTCAGCGGCAGCTTGACATGTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS TCA 90 bp AGGCTTCATACTGCCCTTCTGTGTCATGATTTGCACCTGTCACCATaGGGCGTAAGAAGCCCTCAGAAGGTAAAGGTGGAAAGAACACAA +
Preference number: 5 (lower is better)
Translates to: RLHTALLCHDLHLSP*GVRSPQKVKVERTQ
Trigger: TTGTGTTCTTTCCACCTTTACCTTCTGAGGGCTTCTTACGCCTCATGGTGACAGGTGCAAATCATGACACAGAAGGGCAGTATGAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478793.1
ENST00000491556.1
ENST00000638807.2
CDS TCA 90 bp CGGTTTTCTTTTTCTTCACAGGCTTCATACTGCCCTTCTGTGTCATaGTTTGCACCTGTCACCATGAGGCGTAAGAAGCCCTCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: RFSFSSQASYCPSVS*FAPVTMRRKKPSEG
Trigger: ACCTTCTGAGGGCTTCTTACGCCTCATGGTGACAGGTGCAAATCATGACACAGAAGGGCAGTATGAAGCCTGTGAAGAAAAAGAAAACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000478793.1
ENST00000491556.1
ENST00000638807.2
CDS-3UTR CAA 90 bp TTCCCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCTTCTGTGTCATGATTaGCACCTGCCCTCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: FPHKITHLLTGLSILSTVLLCHD*HLPSGR
Trigger: CCGGCCAGAGGGCAGGTGCAAATCATGACACAGAAG...GACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CAA 90 bp CAAGCCCAACCTAGACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTTCCTTTGTTGTGCGATaGTTGAGACTGCCCGACATG +
Preference number: 5 (lower is better)
Translates to: QAQPRHRSLLRHLSSLTVSFVVR*LRLPDM
Trigger: CATGTCGGGCAGTCTCAACAATCGCACAACAAAGGA...AACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGTCTAGGTTGGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp CCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAAATCTTGGAAGAGCCCTaGGGGTCATCCTTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: PLQCLIQKGAHVKLPLRKILEEP*GSSFVV
Trigger: CACAACAAAGGATGACCCCAAGGGCTCTTCCAAGAT...TTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp AATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCGTGGGAGCCGAGCTGTAATTaGCATAAACTCCAGGACAAT +
Preference number: 5 (lower is better)
Translates to: NGQFISGTLGWNHKSAPWEPSCN*HKLQDN
Trigger: ATTGTCCTGGAGTTTATGCAAATTACAGCTCGGCTC...CCACGGAGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp TTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAACTCATCTGGCCCCTGTCATGGATTAGCCCCTaGTTTGCTGCTCCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: FTEALSFQRFHNKLIWPLSWISP*FAAPFG
Trigger: ACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGA...CAGGGGCCAGATGAGTTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp CCCTTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAAAGAGGACCTGCTTGTTaGAAATCATGTTCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PLQCLIQKGAHVKLPLRKRGPAC*KSCSRG
Trigger: GCCCCTCGAACATGATTTCAAACAAGCAGGTCCTCT...TTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp AGGATGGCTTTCCTGCTCCCCTGCATCACCCTTGCAGTGTTTAATACAAAAGGGCCCTTCATCCAGATCTaGACAATCACACAAACAAGT +
Preference number: 5 (lower is better)
Translates to: RMAFLLPCITLAVFNTKGPFIQI*TITQTS
Trigger: ACTTGTTTGTGTGATTGTCAAGATCTGGATGAAGGG...CCCTTTTGTATTAAACACTGCAAGGGTGATGCAGGGGAGCAGGAAAGCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp GGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTTTTGTTGTGCGATTGTaGAGACTGCCCGACATGTCT +
Preference number: 5 (lower is better)
Translates to: GQWYVEPYWHCVFWQWKIFVVRL*RLPDMS
Trigger: AGACATGTCGGGCAGTCTCAACAATCGCACAACAAA...AATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp TTCGTGCCAATAAACCTGAATAATACACAGAGTCCCTTCCTATCCATGGGAAGGAGAGGACCTGCTTGTTaGAAATCATGTTCGAGGGGC +
Preference number: 5 (lower is better)
Translates to: FVPINLNNTQSPFLSMGRRGPAC*KSCSRG
Trigger: GCCCCTCGAACATGATTTCAAACAAGCAGGTCCTCT...CCTTCCCATGGATAGGAAGGGACTCTGTGTATTATTCAGGTTTATTGGCACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp AACACTGCTCATGGATTAGCCCCTTGTTTGCTGCTCCTTTCGGTACAGACGCCTAAGATCACTCATCTTTaGACAGGTTTAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: NTAHGLAPCLLLLSVQTPKITHL*TGLSIL
Trigger: CAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTT...AGGCGTCTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGAGCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp TACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTAGTACAGAAAATTGTCTCTGGATTAGCCCCTTGTTaGCTGCTCCTTTCGGTACAG +
Preference number: 5 (lower is better)
Translates to: YWHCVFWQWKILVQKIVSGLAPC*LLLSVQ
Trigger: CTGTACCGAAAGGAGCAGCAAACAAGGGGCTAATCC...AGAGACAATTTTCTGTACTAGAATCTTCCACTGCCAGAAAACACAGTGCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CAA 90 bp GCTGTTAATGGTCAGTTCATTTCAGGAACGCTCGGCTGGAACCATAAAAGTGCTCCCTTCATCCAGATCTaGACAATCACACAAACAAGT +
Preference number: 5 (lower is better)
Translates to: AVNGQFISGTLGWNHKSAPFIQI*TITQTS
Trigger: ACTTGTTTGTGTGATTGTCAAGATCTGGATGAAGGG...AGCACTTTTATGGTTCCAGCCGAGCGTTCCTGAAATGAACTGACCATTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp CCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCCACAATAAACTGATGTTCACTTTTTaGGCTCCCCTAAGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: PGTDSFTEALSFQRFHNKLMFTF*APLSQG
Trigger: TCCTTGGCTTAGGGGAGCCAAAAAAGTGAACATCAG...TTTATTGTGGAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
CDS-3UTR CAA 90 bp CCACACAAGATCACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATTCATGGATTAGCCCCTaGTTTGCTGCTCCTTTCGGT +
Preference number: 5 (lower is better)
Translates to: PHKITHLLTGLSILSTVHSWISP*FAAPFG
Trigger: ACCGAAAGGAGCAGCAAACAAGGGGCTAATCCATGA...ATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTTGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp CAAGCCCAACCTAGACATCGCAGCCTCTTAAGACATTTGTCTTCACTAACCGTTAGGCAGATGGTACACTaGAAGACAACAATGACTTCA +
Preference number: 5 (lower is better)
Translates to: QAQPRHRSLLRHLSSLTVRQMVH*KTTMTS
Trigger: TGAAGTCATTGTTGTCTTCAAGTGTACCATCTGCCT...AACGGTTAGTGAAGACAAATGTCTTAAGAGGCTGCGATGTCTAGGTTGGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp ACCAAAGATGTCACAGAGCCTACAGAACACTGCTCATGGATTAGCCCCTTGTTTAAGATCACTCATCTTTaGACAGGTTTAAGCATTCTG +
Preference number: 5 (lower is better)
Translates to: TKDVTEPTEHCSWISPLFKITHL*TGLSIL
Trigger: CAGAATGCTTAAACCTGTCAAAAGATGAGTGATCTT...AAACAAGGGGCTAATCCATGAGCAGTGTTCTGTAGGCTCTGTGACATCTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000498275.5
CDS-3UTR CAA 90 bp AAATGCTTCCCTGGGACTGATTCATTCACAGAGGCCTTGTCCTTTCAAAGATTCGTTTGTAGCAATTTTTaGCTAGGCAGATGGTACACT +
Preference number: 5 (lower is better)
Translates to: KCFPGTDSFTEALSFQRFVCSNF*LGRWYT
Trigger: AGTGTACCATCTGCCTAGCAAAAAATTGCTACAAAC...GAATCTTTGAAAGGACAAGGCCTCTGTGAATGAATCAGTCCCAGGGAAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp TTGCAGTGTTTAATACAAAAGGGTGCACATGTCAAGCTGCCGCTGAGAAAACCAGTTTGTAGCAATTTTTaGCTAGGCAGATGGTACACT +
Preference number: 5 (lower is better)
Translates to: LQCLIQKGAHVKLPLRKPVCSNF*LGRWYT
Trigger: AGTGTACCATCTGCCTAGCAAAAAATTGCTACAAAC...TGGTTTTCTCAGCGGCAGCTTGACATGTGCACCCTTTTGTATTAAACACTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp GGTCAGTGGTATGTAGAACCTTACTGGCACTGTGTTTTCTGGCAGTGGAAGATTCTTATTATCCATTGCTaGCTTAAGCAACCTCTACTT +
Preference number: 5 (lower is better)
Translates to: GQWYVEPYWHCVFWQWKILIIHC*LKQPLL
Trigger: AAGTAGAGGTTGCTTAAGCAAGCAATGGATAATAAG...AATCTTCCACTGCCAGAAAACACAGTGCCAGTAAGGTTCTACATACCACTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330212.7
ENST00000478793.1
CDS-3UTR CAA 90 bp TTTCCTTCTTTATTCTTAAAGGAGGATCCTCTGGATCACCCTTCGGACATGGAATCAGATACTTGGTCCTaGAGTAAGACAAGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: FPSLFLKEDPLDHPSDMESDTWS*SKTSLC
Trigger: ACACAGACTTGTCTTACTCAAGGACCAAGTATCTGA...TTCCATGTCCGAAGGGTGATCCAGAGGATCCTCCTTTAAGAATAAAGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496083.1
CDS TCA 90 bp AAAGATTTACATGTAATCCATCGATCACACCCTTCATCCAGATCTTaGCAATCACACAAACAAGTAGCCACGTGGTTCTTTTCCCCATTC +
Preference number: 5 (lower is better)
Translates to: KDLHVIHRSHPSSRS*QSHKQVATWFFSPF
Trigger: GAATGGGGAAAAGAACCACGTGGCTACTTGTTTGTGTGATTGTCAAGATCTGGATGAAGGGTGTGATCGATGGATTACATGTAAATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS-3UTR CAA 90 bp ACTCATCTTTTGACAGGTTTAAGCATTCTGTCAACTGTCCATCATGGGTTCTCACTGAAGCGTGGATGCTaGTCTATCAGCAACATAATT +
Preference number: 5 (lower is better)
Translates to: THLLTGLSILSTVHHGFSLKRGC*SISNII
Trigger: AATTATGTTGCTGATAGACAAGCATCCACGCTTCAG...TGAGAACCCATGATGGACAGTTGACAGAATGCTTAAACCTGTCAAAAGATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS-3UTR CAA 90 bp TGTCCATCATGGGTTCTCAAGGAACTTAAAACAAGTATCTTCGTGCCAATAAACCTTATTATCCATTGCTaGCTTAAGCAACCTCTACTT +
Preference number: 5 (lower is better)
Translates to: CPSWVLKELKTSIFVPINLIIHC*LKQPLL
Trigger: AAGTAGAGGTTGCTTAAGCAAGCAATGGATAATAAG...GTTTATTGGCACGAAGATACTTGTTTTAAGTTCCTTGAGAACCCATGATGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS TCA 72 bp GCGTCTCCCGATCTCTGCTACGCGGAGCCCCGGGCGTaGCGGCAGGAGTCTCCGGGACCCGGGCTCCGCTCG +
Preference number: 6 (lower is better)
Translates to: ASPDLCYAEPRA*RQESPGPGLRS
Trigger: CGAGCGGAGCCCGGGTCCCGGAGACTCCTGCCGTCACGCCCGGGGCTCCGCGTAGCAGAGATCGGGAGACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330212.7
ENST00000498275.5
ENST00000638807.2
CDS CCA 72 bp GGAGGTGCAACTGCAGCCAAAGAGGCGGAGGGGAGATaGGTCGGCTTCCCCGGAGGCACAGACGCGTCTCCC +
Preference number: 6 (lower is better)
Translates to: GGATAAKEAEGR*VGFPGGTDASP
Trigger: GGGAGACGCGTCTGTGCCTCCGGGGAAGCCGACCCATCTCCCCTCCGCCTCTTTGGCTGCAGTTGCACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 90 bp CATATCCGGCAGTGCCATGCCCGGGCTGGTCGCACCAGCTGGCACTaGGCACACCAGTCCTCCTTCGCTTTGGTGGGGCTTCCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: HIRQCHARAGRTSWH*AHQSSFALVGLPAG
Trigger: GCCAGCTGGAAGCCCCACCAAAGCGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 90 bp GTGCCCAGGGTGGAGAACTGGTGCCAGTTCCGCAGGAAGCCCCTATaGTACTGGCCTGTGTCCACGATGAGCCCGCAGAGGAGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: VPRVENWCQFRRKPL*YWPVSTMSPQRSRR
Trigger: GCGCCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CCA 72 bp AGTGCCATGCCCGGGCTGGTCGCACCAGCTGGCACTTaGCACACCAGTCCTCCTTCGCTTTGGTGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: SAMPGLVAPAGT*HTSPPSLWWGF
Trigger: GAAGCCCCACCAAAGCGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 72 bp CAGTGCCATGCCCGGGCTGGTCGCACCAGCTGGCACTaGGCACACCAGTCCTCCTTCGCTTTGGTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: QCHARAGRTSWH*AHQSSFALVGL
Trigger: AAGCCCCACCAAAGCGAAGGAGGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 72 bp CTGCTTAACCTCCAACGCCTGCCCTCTGGCCGGAGGTaGAACTGCAGCCAAAGAGGCGGAGGGGAGATGGGT +
Preference number: 6 (lower is better)
Translates to: LLNLQRLPSGRR*NCSQRGGGEMG
Trigger: ACCCATCTCCCCTCCGCCTCTTTGGCTGCAGTTGCACCTCCGGCCAGAGGGCAGGCGTTGGAGGTTAAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478793.1
ENST00000638807.2
CDS CCA 72 bp ACAGATGCCACATATCCGGCAGTGCCATGCCCGGGCTaGTCGCACCAGCTGGCACTTGGCACACCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: TDATYPAVPCPG*SHQLALGTPVL
Trigger: GAGGACTGGTGTGCCAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATATGTGGCATCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 72 bp TCTCCTCACACAGATGCCACATATCCGGCAGTGCCATaGCCGGGCTGGTCGCACCAGCTGGCACTTGGCACA +
Preference number: 6 (lower is better)
Translates to: SPHTDATYPAVP*PGWSHQLALGT
Trigger: TGTGCCAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATATGTGGCATCTGTGTGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CCA 72 bp AACTGGTGCCAGTTCCGCAGGAAGCCCCTATTGTACTaGCCTGTGTCCACGATGAGCCCGCAGAGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: NWCQFRRKPLLY*PVSTMSPQRSR
Trigger: CCGGCTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS GCA 72 bp CTGTGTCATGATTTGCACCTGCCCTCTGGCCGGAGGTaGAACTGCAGCCAAAGAGGCGGAGGGGAGATGGGT +
Preference number: 6 (lower is better)
Translates to: LCHDLHLPSGRR*NCSQRGGGEMG
Trigger: ACCCATCTCCCCTCCGCCTCTTTGGCTGCAGTTGCACCTCCGGCCAGAGGGCAGGTGCAAATCATGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330212.7
CDS GCA 72 bp TCCATTCTCCTCACACAGATGCCACATATCCGGCAGTaGCATGCCCGGGCTGGTCGCACCAGCTGGCACTTG +
Preference number: 6 (lower is better)
Translates to: SILLTQMPHIRQ*HARAGRTSWHL
Trigger: CAAGTGCCAGCTGGTGCGACCAGCCCGGGCATGGCACTGCCGGATATGTGGCATCTGTGTGAGGAGAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CCA 72 bp GGGTGGTGGAATGCACGTGTGCCCAGGGTGGAGAACTaGTGCCAGTTCCGCAGGAAGCCCCTATTGTACTGG +
Preference number: 6 (lower is better)
Translates to: GWWNARVPRVEN*CQFRRKPLLYW
Trigger: CCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCACACGTGCATTCCACCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CAA 72 bp GTGGAGAACTGGTGCCAGTTCCGCAGGAAGCCCCTATaGTACTGGCCTGTGTCCACGATGAGCCCGCAGAGG +
Preference number: 6 (lower is better)
Translates to: VENWCQFRRKPL*YWPVSTMSPQR
Trigger: CCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS GCA 72 bp TGGTGGAATGCACGTGTGCCCAGGGTGGAGAACTGGTaGCAGTTCCGCAGGAAGCCCCTATTGTACTGGCCT +
Preference number: 6 (lower is better)
Translates to: WWNARVPRVENW*QFRRKPLLYWP
Trigger: AGGCCAGTACAATAGGGGCTTCCTGCGGAACTGGCACCAGTTCTCCACCCTGGGCACACGTGCATTCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS CAA 90 bp GCTGGCATCTTGGAAGAGCCCTTGGGGTCATCCTTTGTTGTGCGATaGTTGAGACTGCCCGACATGTCTGCCCCAGGGAACCCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: AGILEEPLGSSFVVR*LRLPDMSAPGNPLV
Trigger: GACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAGGATGACCCCAAGGGCTCTTCCAAGATGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS TCA 72 bp AGTATCAGAAATAACCCGCAGGTAAGAACCGCCAGCTaGACGGGACCCACACGCCCTTTGGGGACCACTTCC +
Preference number: 6 (lower is better)
Translates to: SIRNNPQVRTAS*TGPTRPLGTTS
Trigger: GGAAGTGGTCCCCAAAGGGCGTGTGGGTCCCGTTCAGCTGGCGGTTCTTACCTGCGGGTTATTTCTGATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CCA 72 bp CCTCCTTCGCTTTGGTGGGGCTTCCAGCTGGCATCTTaGAAGAGCCCTTGGGGTCATCCTTTGTTGTGCGAT +
Preference number: 6 (lower is better)
Translates to: PPSLWWGFQLAS*KSPWGHPLLCD
Trigger: ATCGCACAACAAAGGATGACCCCAAGGGCTCTTCCAAGATGCCAGCTGGAAGCCCCACCAAAGCGAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 72 bp GAAGAGCCCTTGGGGTCATCCTTTGTTGTGCGATTGTaGAGACTGCCCGACATGTCTGCCCCAGGGAACCCT +
Preference number: 6 (lower is better)
Translates to: EEPLGSSFVVRL*RLPDMSAPGNP
Trigger: AGGGTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAGGATGACCCCAAGGGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 90 bp GGCATCTTGGAAGAGCCCTTGGGGTCATCCTTTGTTGTGCGATTGTaGAGACTGCCCGACATGTCTGCCCCAGGGAACCCTTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: GILEEPLGSSFVVRL*RLPDMSAPGNPLVF
Trigger: GAAGACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAGGATGACCCCAAGGGCTCTTCCAAGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS TCA 72 bp AAGAGCCCTTGGGGTCATCCTTTGTTGTGCGATTGTTaGGACTGCCCGACATGTCTGCCCCAGGGAACCCTT +
Preference number: 6 (lower is better)
Translates to: KSPWGHPLLCDC*DCPTCLPQGTL
Trigger: AAGGGTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAGGATGACCCCAAGGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 72 bp TTACATCTCGTAAATAGGTCCACGCCTCTCTCTCTCTaGTTAACCTCCAACGCCTGCCCTCTGGCCGGAGGT +
Preference number: 6 (lower is better)
Translates to: LHLVNRSTPLSL*LTSNACPLAGG
Trigger: ACCTCCGGCCAGAGGGCAGGCGTTGGAGGTTAAGCAGAGAGAGAGAGGCGTGGACCTATTTACGAGATGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478793.1
ENST00000638807.2
CDS CAA 72 bp TTGGAAGAGCCCTTGGGGTCATCCTTTGTTGTGCGATaGTTGAGACTGCCCGACATGTCTGCCCCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: LEEPLGSSFVVR*LRLPDMSAPGN
Trigger: GTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAGGATGACCCCAAGGGCTCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS TCA 72 bp TCCACGCCTCTCTCTCTCTGCTTAACCTCCAACGCCTaGGCAATCAAAAATGAGAAGAGAGAGGGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: STPLSLCLTSNA*AIKNEKREGEG
Trigger: CCCCTCCCCCTCTCTCTTCTCATTTTTGATTGCTCAGGCGTTGGAGGTTAAGCAGAGAGAGAGAGGCGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000491556.1
CDS GCA 72 bp CTTTGTTGTGCGATTGTTGAGACTGCCCGACATGTCTaGCCCAGGGAACCCTTTGGTCTTCTCCTGCCCTTT +
Preference number: 6 (lower is better)
Translates to: LCCAIVETARHV*PREPFGLLLPF
Trigger: AAAGGGCAGGAGAAGACCAAAGGGTTCCCTGGGGCAGACATGTCGGGCAGTCTCAACAATCGCACAACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 72 bp CATAATCTCGTAAATAGGTCCACGCCTCTCTCTCTCTaGTTAACCTCCAACGCCCTCTGGCCGGAGGTGCAA +
Preference number: 6 (lower is better)
Translates to: HNLVNRSTPLSL*LTSNALWPEVQ
Trigger: TTGCACCTCCGGCCAGAGGGCGTTGGAGGTTAAGCAGAGAGAGAGAGGCGTGGACCTATTTACGAGATTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498275.5
CDS GCA 72 bp TTCTTTCCTTCTGTGAGTGAGGTAGTAGTACCACAGTaGCAGCACAGGAAGGGAGGTCAAAACCACCACCCC +
Preference number: 6 (lower is better)
Translates to: FFPSVSEVVVPQ*QHRKGGQNHHP
Trigger: GGGGTGGTGGTTTTGACCTCCCTTCCTGTGCTGGCACTGTGGTACTACTACCTCACTCACAGAAGGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS GCA 72 bp GTTGATCAGCTGGATCAGGAAGATGTAGGCCATGCCTaGTGTGATGATCACAGAGTACCACACGCAGGTGAA +
Preference number: 6 (lower is better)
Translates to: VDQLDQEDVGHA*CDDHRVPHAGE
Trigger: TTCACCTGCGTGTGGTACTCTGTGATCATCACAGCAGGCATGGCCTACATCTTCCTGATCCAGCTGATCAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000488129.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 72 bp AGGACAAGCGGAGGGATGATGCTGATGTTCACTTTTTaGGCTCCCCTAAGCCAAGGAATTCGGAGGCGATCA +
Preference number: 6 (lower is better)
Translates to: RTSGGMMLMFTF*APLSQGIRRRS
Trigger: TGATCGCCTCCGAATTCCTTGGCTTAGGGGAGCCAAAAAAGTGAACATCAGCATCATCCCTCCGCTTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 90 bp ACAGGCAGCAGGACAAGCGGAGGGATGATGCTGATGTTCACTTTTTaGGCTCCCCTAAGCCAAGGAATTCGGAGGCGATCAGAAATTGTA +
Preference number: 6 (lower is better)
Translates to: TGSRTSGGMMLMFTF*APLSQGIRRRSEIV
Trigger: TACAATTTCTGATCGCCTCCGAATTCCTTGGCTTAGGGGAGCCAAAAAAGTGAACATCAGCATCATCCCTCCGCTTGTCCTGCTGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS TCA 72 bp ACTGCCCTTCTGTGTCATGATTTGCACCTGTCACCATaGGGCGTAAGAAGCCCTCAGAAGGTAAAGGTGGAA +
Preference number: 6 (lower is better)
Translates to: TALLCHDLHLSP*GVRSPQKVKVE
Trigger: TTCCACCTTTACCTTCTGAGGGCTTCTTACGCCTCATGGTGACAGGTGCAAATCATGACACAGAAGGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000478793.1
ENST00000491556.1
ENST00000638807.2
CDS GCA 72 bp ACAAGCAGTATCCCTGACCCACAAAACTGGAGAAATTaGCACCGGGAACATAACAGTTTAGGGCTAGGGACA +
Preference number: 6 (lower is better)
Translates to: TSSIPDPQNWRN*HREHNSLGLGT
Trigger: TGTCCCTAGCCCTAAACTGTTATGTTCCCGGTGGCAATTTCTCCAGTTTTGTGGGTCAGGGATACTGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS TCA 72 bp CATGTAATCCATCGATCACACCCTTCATCCAGATCTTaGCAATCACACAAACAAGTAGCCACGTGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: HVIHRSHPSSRS*QSHKQVATWFF
Trigger: AAAGAACCACGTGGCTACTTGTTTGTGTGATTGTCAAGATCTGGATGAAGGGTGTGATCGATGGATTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS CAA 72 bp ACATGTAATCCATCGATCACACCCTTCATCCAGATCTaGACAATCACACAAACAAGTAGCCACGTGGTTCTT +
Preference number: 6 (lower is better)
Translates to: TCNPSITPFIQI*TITQTSSHVVL
Trigger: AAGAACCACGTGGCTACTTGTTTGTGTGATTGTCAAGATCTGGATGAAGGGTGTGATCGATGGATTACATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS TCA 72 bp GCCAAGGAATTCGGAGGCGATCAGAAATTGTATCCATaGTTCTTTCACAAGTCTCTGGCTGTAAAGATTTAC +
Preference number: 6 (lower is better)
Translates to: AKEFGGDQKLYP*FFHKSLAVKIY
Trigger: GTAAATCTTTACAGCCAGAGACTTGTGAAAGAATCATGGATACAATTTCTGATCGCCTCCGAATTCCTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000491556.1
ENST00000498275.5
ENST00000638807.2
CDS TCA 72 bp TTTATTTTTGCCTCACCTCAAACATCAACTAGAAATTaGGTCTTTAGCAGCCCATATTCCAATGGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: FIFASPQTSTRN*VFSSPYSNGAS
Trigger: GCTGGCGCCATTGGAATATGGGCTGCTAAAGACTCAATTTCTAGTTGATGTTTGAGGTGAGGCAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488129.1
ENST00000638807.2
CDS TCA 72 bp AATTTGCATAAACTCCAGGACAATAGAAAAGAGCTGTaGAGACACTTCTGTCTCTACAAATGGTGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: NLHKLQDNRKEL*RHFCLYKWCPR
Trigger: CCTTGGACACCATTTGTAGAGACAGAAGTGTCTTCACAGCTCTTTTCTATTGTCCTGGAGTTTATGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330212.7
ENST00000478793.1
ENST00000498275.5
ENST00000638807.2