Pregenerated sensors for ZDHHC20-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000236953

Ensembl transcript IDs: ENST00000417513.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CCTAGTGCCTGTGATCTGACTCCGTCCTGGGTCTTAGGCTCTGGCTaGAGCCCTGCCCGCAGGCTCCAGGTCCTCTGCAAGGACCTAACT	+
Preference number: 5 (lower is better) Translates to: PSACDLTPSWVLGSG*SPARRLQVLCKDLT Trigger: AGTTAGGTCCTTGCAGAGGACCTGGAGCCTGCGGGCAGGGCTGCAGCCAGAGCCTAAGACCCAGGACGGAGTCAGATCACAGGCACTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417513.1
CDS CCA 90 bp	GGCTTTTCTGGGGACCAAGTACTACTCCACAGCTCCAGCTCTTGGTaGCATGGACCTGGCTTACAATCACCGTATGCGGGACACAGCTCC	+
Preference number: 5 (lower is better) Translates to: GFSGDQVLLHSSSSW*HGPGLQSPYAGHSS Trigger: GGAGCTGTGTCCCGCATACGGTGATTGTAAGCCAGGTCCATGCCACCAAGAGCTGGAGCTGTGGAGTAGTACTTGGTCCCCAGAAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417513.1
CDS CCA 90 bp	GAGGGCTTTTCTGGGGACCAAGTACTACTCCACAGCTCCAGCTCTTaGTGGCATGGACCTGGCTTACAATCACCGTATGCGGGACACAGC	+
Preference number: 5 (lower is better) Translates to: EGFSGDQVLLHSSSS*WHGPGLQSPYAGHS Trigger: GCTGTGTCCCGCATACGGTGATTGTAAGCCAGGTCCATGCCACCAAGAGCTGGAGCTGTGGAGTAGTACTTGGTCCCCAGAAAAGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417513.1
CDS CCA 90 bp	TTCTGGGGACCAAGTACTACTCCACAGCTCCAGCTCTTGGTGGCATaGACCTGGCTTACAATCACCGTATGCGGGACACAGCTCCTCTTC	+
Preference number: 5 (lower is better) Translates to: FWGPSTTPQLQLLVA*TWLTITVCGTQLLF Trigger: GAAGAGGAGCTGTGTCCCGCATACGGTGATTGTAAGCCAGGTCCATGCCACCAAGAGCTGGAGCTGTGGAGTAGTACTTGGTCCCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417513.1
CDS CCA 72 bp	ACTACTCCACAGCTCCAGCTCTTGGTGGCATGGACCTaGCTTACAATCACCGTATGCGGGACACAGCTCCTC	+
Preference number: 6 (lower is better) Translates to: TTPQLQLLVAWT*LTITVCGTQLL Trigger: GAGGAGCTGTGTCCCGCATACGGTGATTGTAAGCCAGGTCCATGCCACCAAGAGCTGGAGCTGTGGAGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417513.1
CDS CCA 72 bp	GGGGACCAAGTACTACTCCACAGCTCCAGCTCTTGGTaGCATGGACCTGGCTTACAATCACCGTATGCGGGA	+
Preference number: 6 (lower is better) Translates to: GDQVLLHSSSSW*HGPGLQSPYAG Trigger: TCCCGCATACGGTGATTGTAAGCCAGGTCCATGCCACCAAGAGCTGGAGCTGTGGAGTAGTACTTGGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417513.1
CDS CCA 72 bp	CCAAGTACTACTCCACAGCTCCAGCTCTTGGTGGCATaGACCTGGCTTACAATCACCGTATGCGGGACACAG	+
Preference number: 6 (lower is better) Translates to: PSTTPQLQLLVA*TWLTITVCGTQ Trigger: CTGTGTCCCGCATACGGTGATTGTAAGCCAGGTCCATGCCACCAAGAGCTGGAGCTGTGGAGTAGTACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417513.1

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