RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC16 (Homo sapiens)

Ensembl gene IDs: ENSG00000171307

Ensembl transcript IDs: ENST00000345745.9, ENST00000352634.8, ENST00000353979.7, ENST00000370842.6, ENST00000370846.8, ENST00000370854.7, ENST00000393760.6, ENST00000414567.5, ENST00000417044.1, ENST00000420089.5, ENST00000433086.5, ENST00000459777.5, ENST00000462924.5, ENST00000466895.5, ENST00000487315.1, ENST00000492610.5, ENST00000492733.1, ENST00000495735.5

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTT +
Preference number: 1 (lower is better)
Translates to: LHIVSFFCSGKKAGP*IVLHGTLRQAHWLF
Trigger: AAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTTTTACCACTGCAGAAGAAAGACACAATGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: VVANSSAVSWRRSGSALGPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 2 (lower is better)
Translates to: VVANSSAVSWRRSGSALGELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 2 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTACCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 2 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTATTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 2 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 2 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR GCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 2 (lower is better)
Translates to: VVANSSAVSWRRSGSALGVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTCTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTACTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCCTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCCTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTACCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR GCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR GCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTTCCAGTGCTGTATCCTaGAGGAGGTCCGGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFSSAVS*RRSGSA
Trigger: TGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 2 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR GCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 2 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTCTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 2 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR GCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 2 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR TCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR-3UTR CCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR CCA 72 bp GTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTaGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGT +
Preference number: 3 (lower is better)
Translates to: VEEVVANSSAVS*RRSGSALGKVG
Trigger: ACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
3UTR TCA 72 bp AAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAGGCCCTTGAAATAACA +
Preference number: 3 (lower is better)
Translates to: KAGPLALFDQGF*EKLPLEALEIT
Trigger: TGTTATTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGTCTGCCGCCGCTCACTaGCACCCCCTCCGACTCGGC +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGSAAAH*HPLRLG
Trigger: GCCGAGTCGGAGGGGGTGGCAGTGAGCGGCGGCAGA...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCCAATCCAAACCACCATaGCCCGCCGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGQSKPP*PAARSA
Trigger: GGCGCTGCGGGCGGCGGGCCATGGTGGTTTGGATTG...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTTCTGCCGCCGCTCACTaGCACCCCCTCCGACTCGGC +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTSAAAH*HPLRLG
Trigger: GCCGAGTCGGAGGGGGTGGCAGTGAGCGGCGGCAGA...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCTCTGCCGCCGCTCACTaGCACCCCCTCCGACTCGGC +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVSAAAH*HPLRLG
Trigger: GCCGAGTCGGAGGGGGTGGCAGTGAGCGGCGGCAGA...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGSAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGATTCCTGCCCTGGGGTaGGTACCCAGGCGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGIPALG*VPRRSG
Trigger: ACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAAT...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTSSRLR*PRMVPA
Trigger: GGCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCT...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370854.7
CDS-3UTR CCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSSSRLR*PRMVPA
Trigger: GGCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCT...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370854.7
CDS-3UTR CCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTATTCCTGCCCTGGGGTaGGTACCCAGGCGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGIPALG*VPRRSG
Trigger: ACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAAT...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGSSRLR*PRMVPD
Trigger: ATCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCT...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR TCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGAESWH*VGSEDE
Trigger: CTCATCCTCCGAACCTACTCAGTGCCACGACTCTGC...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTATTCCTGCCCTGGGGTaGGTACCCAGGCGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTIPALG*VPRRSG
Trigger: ACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAAT...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCATTCCTGCCCTGGGGTaGGTACCCAGGCGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSIPALG*VPRRSG
Trigger: ACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAAT...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGATATCATTCCTGCCCTaGGGTGGGTACCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGISFLP*GGYPGG
Trigger: TCCGCCTGGGTACCCACCCCAGGGCAGGAATGATAT...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCATATCATTCCTGCCCTaGGGTGGGTACCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGISFLP*GGYPGG
Trigger: TCCGCCTGGGTACCCACCCCAGGGCAGGAATGATAT...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTTGTGAGAAGTGGCAGTaGCCTCAGCAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTCEKWQ*PQQQAW
Trigger: CCAGGCCTGCTGCTGAGGTCACTGCCACTTCTCACA...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR TCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSTQAEW*WPGSSG
Trigger: TCCACTACTACCAGGCCATCACCACTCCGCCTGGGT...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTTQAEW*WPGSSG
Trigger: TCCACTACTACCAGGCCATCACCACTCCGCCTGGGT...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTTCCGCTGGCCTCGCATaGTTCCTGCCGCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLASAGLA*FLPPAD
Trigger: GTCGGCAGGCGGCAGGAACCATGCGAGGCCAGCGGA...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370846.8
ENST00000370854.7
CDS-3UTR CCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGLERRR*VVGSGD
Trigger: ATCACCAGACCCCACCACCCACCTTCTCCTTTCGAG...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGLERRR*VVGSGD
Trigger: ATCACCAGACCCCACCACCCACCTTCTCCTTTCGAG...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTTCCAGTGCTGTATCCTaGAGGAGGTCCGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGSSAVS*RRSGSA
Trigger: TGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGGGAGGGATGCAGAAGTaGAAAGCCTGGCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGGGMQK*KAWPDV
Trigger: GACATCTGGCCAGGCTTTCCACTTCTGCATCCCTCC...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR TCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGTAGGTTCGGAGGATaGGAGGCAGGACACACAGGT +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGSRFGG*EAGHTG
Trigger: ACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACT...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGTCTGCCGCCGCTCACTaGCACCCCCTCCGACTCGGC +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRSAAAH*HPLRLG
Trigger: GCCGAGTCGGAGGGGGTGGCAGTGAGCGGCGGCAGA...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAACAGCGGTGTCACTaGCCCCAAAGGAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGQQRCH*PQRSCR
Trigger: TCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTG...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTACCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGTCCRC*SGVFGL
Trigger: CAGCCCGAACACACCACTGCAGCATCTGCAACAGGT...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCTCAGCACACACCTGTTaGAGATGCTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGSAHTC*RCCSGV
Trigger: CACACCACTGCAGCATCTGCAACAGGTGTGTGCTGA...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCCCAACTTCCATAGCTaGAGTAGACACAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGPNFHS*SRHSPE
Trigger: CTCTGGGCTGTGTCTACTGCAGCTATGGAAGTTGGG...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGCACCCAGGGCAAGTaGCACAGAACTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVGTQGK*HRTAQE
Trigger: TTCCTGTGCAGTTCTGTGGCACTTGCCCTGGGTGCC...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCGGCACCCAGGGCAAGTaGCACAGAACTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSGTQGK*HRTAQE
Trigger: TTCCTGTGCAGTTCTGTGGCACTTGCCCTGGGTGCC...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGVVCSG*LGVNAL
Trigger: AAGTGCATTTACCCCAAGCCAGCCCGAACACACCAC...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCTCCGCTGGCCTCGCATaGTTCCCGGCTCATGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVSAGLA*FPAHGS
Trigger: ACTTCCATGAGCCGGGAACCATGCGAGGCCAGCGGA...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR CCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAACCCAACAGAAACTaGAGGAGGCTGCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGKPNRN*RRLLHC
Trigger: GCAGTGGAGCAGCCTCCTCCAGTTTCTGTTGGGTTT...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR TCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAAGTAGGTTCGGAGGATaGGAGGCAGGACACACAGGT +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVSRFGG*EAGHTG
Trigger: ACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACT...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCAGTAGGTTCGGAGGATaGGAGGCAGGACACACAGGT +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSSRFGG*EAGHTG
Trigger: ACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACT...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVAESWH*VGSEDE
Trigger: CTCATCCTCCGAACCTACTCAGTGCCACGACTCTGC...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLASAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTACCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTTCCRC*SGVFGL
Trigger: CAGCCCGAACACACCACTGCAGCATCTGCAACAGGT...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAACCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVTCCRC*SGVFGL
Trigger: CAGCCCGAACACACCACTGCAGCATCTGCAACAGGT...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTTCAGCACACACCTGTTaGAGATGCTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGSAHTC*RCCSGV
Trigger: CACACCACTGCAGCATCTGCAACAGGTGTGTGCTGA...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCGGCACCCAGGGCAAGTaGCACAGAACTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVGTQGK*HRTAQE
Trigger: TTCCTGTGCAGTTCTGTGGCACTTGCCCTGGGTGCC...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCCAATCCAAACCACCATaGCCCGCCGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFQSKPP*PAARSA
Trigger: GGCGCTGCGGGCGGCGGGCCATGGTGGTTTGGATTG...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTCCGCTGGCCTCGCATaGTTCCTGCCGCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFSAGLA*FLPPAD
Trigger: GTCGGCAGGCGGCAGGAACCATGCGAGGCCAGCGGA...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370846.8
ENST00000370854.7
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGVFGLA*GKCTSY
Trigger: GTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACAC...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGKGEGG*WGLVIS
Trigger: ACTTATCACCAGACCCCACCACCCACCTTCTCCTTT...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTLERRR*VVGSGD
Trigger: ATCACCAGACCCCACCACCCACCTTCTCCTTTCGAG...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSLERRR*VVGSGD
Trigger: ATCACCAGACCCCACCACCCACCTTCTCCTTTCGAG...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGTACAGATGGAGACGGTaGCGATATCATTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGYRWRR*RYHSCP
Trigger: AGGGCAGGAATGATATCGCCACCGTCTCCATCTGTA...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFSSRLR*PRMVPG
Trigger: GCCGGGAACCATGCGAGGCCAGCGGAGCCTGCTGCT...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR TCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCTTCCCATGGGGCAAGTaGCTAGAAGGTAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSFPWGK*LEGKST
Trigger: GGTGCTCTTACCTTCTAGTCACTTGCCCCATGGGAA...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLACHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLATQAEW*WPGSSG
Trigger: TCCACTACTACCAGGCCATCACCACTCCGCCTGGGT...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCCAACAGCGGTGTCACTaGCCCCAAAGGAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSQQRCH*PQRSCR
Trigger: TCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTG...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCCAACAGCGGTGTCACTaGCCCCAAAGGAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSQQRCH*PQRSCR
Trigger: TCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTG...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCCACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTACCCAACTTCCATAGCTaGAGTAGACACAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVPNFHS*SRHSPE
Trigger: CTCTGGGCTGTGTCTACTGCAGCTATGGAAGTTGGG...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTCCCAACTTCCATAGCTaGAGTAGACACAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTPNFHS*SRHSPE
Trigger: CTCTGGGCTGTGTCTACTGCAGCTATGGAAGTTGGG...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTCTGATGAGAACAGCATaGCATACAGTTAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGLMRTA*HTVRAP
Trigger: GGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAG...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCCAATCCAAACCACCATaGCCCGCCGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSQSKPP*PAARSA
Trigger: GGCGCTGCGGGCGGCGGGCCATGGTGGTTTGGATTG...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTCCGCTGGCCTCGCATaGTTCCTGCCGCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSSAGLA*FLPPAD
Trigger: GTCGGCAGGCGGCAGGAACCATGCGAGGCCAGCGGA...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370846.8
ENST00000370854.7
CDS-3UTR CCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGTCCGCTGGCCTCGCATaGTTCCTGCCGCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWSAGLA*FLPPAD
Trigger: GTCGGCAGGCGGCAGGAACCATGCGAGGCCAGCGGA...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370854.7
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFSSRLR*PRMVPA
Trigger: GGCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCT...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370846.8
ENST00000370854.7
CDS-3UTR CCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSVVCSG*LGVNAL
Trigger: AAGTGCATTTACCCCAAGCCAGCCCGAACACACCAC...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGGTGATAAGTCTCAATaGCAGCATAAGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGGDKSQ*QHKPPG
Trigger: TCCGGGAGGCTTATGCTGCCATTGAGACTTATCACC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
CDS-3UTR TCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGTATCTTTGCCCTGTTaGGAAGCCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGVSLPC*EAKISA
Trigger: AGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATAC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAAESWH*VGSEDE
Trigger: CTCATCCTCCGAACCTACTCAGTGCCACGACTCTGC...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSSAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GGGQLQCCILEEVRVSTGLAWGK*TSYRWR
Trigger: TCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAG...CCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCCTGATGAGAACAGCATaGCATACAGTTAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSLMRTA*HTVRAP
Trigger: GGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAG...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTACAGGCCTGGTATCTTTaGCCTGTTGAGAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVQAWYL*PVEKPR
Trigger: TCTTGGCTTCTCAACAGGGCAAAGATACCAGGCCTG...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR CCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAACAATCCAAACCACCATaGCCCGCCGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQQSKPP*PAARSA
Trigger: GGCGCTGCGGGCGGCGGGCCATGGTGGTTTGGATTG...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWSSRLR*PRMVPA
Trigger: GGCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCT...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370854.7
CDS-3UTR CCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSVFGLA*GKCTSY
Trigger: GTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACAC...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVVFGLA*GKCTSY
Trigger: GTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACAC...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTGATAAGTCTCAATaGCAGCATAAGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVGDKSQ*QHKPPG
Trigger: TCCGGGAGGCTTATGCTGCCATTGAGACTTATCACC...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
CDS-3UTR CCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTCTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTTACAGATGGAGACGGTaGCGATATCATTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTYRWRR*RYHSCP
Trigger: AGGGCAGGAATGATATCGCCACCGTCTCCATCTGTA...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGGTGATAAGTCTGGTTaGCAACCGCCTGTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGGDKSG*QPPVVC
Trigger: ACAAACTACAGGCGGTTGCCAACCAGACTTATCACC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR TCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VVANSSAVSWRRSGSALGPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...GCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGTATCTTTGCCCTGTTaGGAAGCCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVVSLPC*EAKISA
Trigger: AGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATAC...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGTGTGAGAAGTGGCAGTaGCCTCAGCAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRCEKWQ*PQQQAW
Trigger: CCAGGCCTGCTGCTGAGGTCACTGCCACTTCTCACA...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR TCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSTQAEW*WPGSSG
Trigger: TCCACTACTACCAGGCCATCACCACTCCGCCTGGGT...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLSAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSSAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVSAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGLAWGK*TSYRWR
Trigger: TCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAG...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLATRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKSSRLR*PRMVPA
Trigger: GGCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCT...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370846.8
ENST00000370854.7
CDS-3UTR CCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTTGCACTTCTTACAGATaGAGACGGTGGCGATATCAT +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGCTSYR*RRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCA...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGATTCCTGCCCTGGGGTaGGTACCCAGGCGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLIPALG*VPRRSG
Trigger: ACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAAT...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCTACAGATGGAGACGGTaGCGATATCATTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVYRWRR*RYHSCP
Trigger: AGGGCAGGAATGATATCGCCACCGTCTCCATCTGTA...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTGATAAGTCTGGTTaGCAACCGCCTGTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVGDKSG*QPPVVC
Trigger: ACAAACTACAGGCGGTTGCCAACCAGACTTATCACC...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR TCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGTGAGAAGTGGCAGTaGCCTCAGCAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSCEKWQ*PQQQAW
Trigger: CCAGGCCTGCTGCTGAGGTCACTGCCACTTCTCACA...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR TCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTGTGAGAAGTGGCAGTaGCCTCAGCAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDCEKWQ*PQQQAW
Trigger: CCAGGCCTGCTGCTGAGGTCACTGCCACTTCTCACA...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR TCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSAESWH*VGSEDE
Trigger: CTCATCCTCCGAACCTACTCAGTGCCACGACTCTGC...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRAESWH*VGSEDE
Trigger: CTCATCCTCCGAACCTACTCAGTGCCACGACTCTGC...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSTQAEW*WPGSSG
Trigger: TCCACTACTACCAGGCCATCACCACTCCGCCTGGGT...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQSAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCAACAGCGGTGTCACTaGCCCCAAAGGAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAQQRCH*PQRSCR
Trigger: TCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTG...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSLAWGK*TSYRWR
Trigger: TCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAG...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGATTCTTCCTGCCGCCTaGCGACTCCCCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVILPAA*RLPSQP
Trigger: TGGCTGACTGGGGAGTCGGCAGGCGGCAGGAAGAAT...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR CCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTATGCACTTCTTACAGATaGAGACGGTGGCGATATCAT +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVCTSYR*RRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCA...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAVVCSG*LGVNAL
Trigger: AAGTGCATTTACCCCAAGCCAGCCCGAACACACCAC...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGATATCATTCCTGCCCTaGGGTGGGTACCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRISFLP*GGYPGG
Trigger: TCCGCCTGGGTACCCACCCCAGGGCAGGAATGATAT...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTATATCATTCCTGCCCTaGGGTGGGTACCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSISFLP*GGYPGG
Trigger: TCCGCCTGGGTACCCACCCCAGGGCAGGAATGATAT...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAATGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAATGTGAGAAGTGGCAGTaGCCTCAGCAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKCEKWQ*PQQQAW
Trigger: CCAGGCCTGCTGCTGAGGTCACTGCCACTTCTCACA...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR TCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAATGTGAGAAGTGGCAGTaGCCTCAGCAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQCEKWQ*PQQQAW
Trigger: CCAGGCCTGCTGCTGAGGTCACTGCCACTTCTCACA...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR TCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTAGTAGGTTCGGAGGATaGGAGGCAGGACACACAGGT +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSSRFGG*EAGHTG
Trigger: ACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACT...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCAGTAGGTTCGGAGGATaGGAGGCAGGACACACAGGT +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFSRFGG*EAGHTG
Trigger: ACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACT...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSAESWH*VGSEDE
Trigger: CTCATCCTCCGAACCTACTCAGTGCCACGACTCTGC...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDAESWH*VGSEDE
Trigger: CTCATCCTCCGAACCTACTCAGTGCCACGACTCTGC...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQTQAEW*WPGSSG
Trigger: TCCACTACTACCAGGCCATCACCACTCCGCCTGGGT...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTAGTATGTGGCAGTGGTaGTCCATCTTCAGCACACAC +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLASMWQW*SIFSTH
Trigger: GTGTGTGCTGAAGATGGATCACCACTGCCACATACT...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370846.8
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKSAGRP*RSASAV
Trigger: TACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCT...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp AGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SRRGGGQLQCCILEEVRVLAWGK*TSYRWR
Trigger: TCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAG...GACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTCACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGGGCACCCAGGGCAAGTaGCACAGAACTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLGTQGK*HRTAQE
Trigger: TTCCTGTGCAGTTCTGTGGCACTTGCCCTGGGTGCC...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp AGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: RGGGQLQCCILEEVRVSTSFLLM*LSMLVS
Trigger: TGAGACTAGCATCGAAAGGCACATCAACAAGAAGGA...AGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGAATACCTTTATTTGTaGTCCCTTAAGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGEYLYL*SLKQHV
Trigger: CACATGCTGCTTAAGGGAGCACAAATAAAGGTATTC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCAGCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFSCCRC*SGVFGL
Trigger: CAGCCCGAACACACCACTGCAGCATCTGCAACAGCT...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353979.7
CDS-3UTR GCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAAAAGACCTGCCGCCTaGCGACTCCCCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKKRPAA*RLPSQP
Trigger: TGGCTGACTGGGGAGTCGGCAGGCGGCAGGTCTTTT...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR CCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCCAATCCAAACCACCATaGCCCGCCGCCCGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCQSKPP*PAARSA
Trigger: GGCGCTGCGGGCGGCGGGCCATGGTGGTTTGGATTG...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCTCCGCTGGCCTCGCATaGTTCCTGCCGCCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCSAGLA*FLPPAD
Trigger: GTCGGCAGGCGGCAGGAACCATGCGAGGCCAGCGGA...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370854.7
CDS-3UTR CCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGTCCAGTGCTGTATCCTaGAGGAGGTCCGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLSSAVS*RRSGSA
Trigger: TGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGTCCAGTGCTGTATCCTaGAGGAGGTCCGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWSSAVS*RRSGSA
Trigger: TGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCCAGTGCTGTATCCTaGAGGAGGTCCGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDSSAVS*RRSGSA
Trigger: TGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTATTCCTGCCCTGGGGTaGGTACCCAGGCGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFIPALG*VPRRSG
Trigger: ACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAAT...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGATATCATTCCTGCCCTaGGGTGGGTACCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLISFLP*GGYPGG
Trigger: TCCGCCTGGGTACCCACCCCAGGGCAGGAATGATAT...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTTCCCATGGGGCAAGTaGCTAGAAGGTAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFFPWGK*LEGKST
Trigger: GGTGCTCTTACCTTCTAGTCACTTGCCCCATGGGAA...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGTTCCCATGGGGCAAGTaGCTAGAAGGTAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRFPWGK*LEGKST
Trigger: GGTGCTCTTACCTTCTAGTCACTTGCCCCATGGGAA...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTGTATCTTTGCCCTGTTaGGAAGCCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAVSLPC*EAKISA
Trigger: AGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATAC...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGAGTAGGTTCGGAGGATaGGAGGCAGGACACACAGGT +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVSRFGG*EAGHTG
Trigger: ACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACT...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGTCTGCCGCCGCTCACTaGCACCCCCTCCGACTCGGC +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKSAAAH*HPLRLG
Trigger: GCCGAGTCGGAGGGGGTGGCAGTGAGCGGCGGCAGA...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATACCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDTCCRC*SGVFGL
Trigger: CAGCCCGAACACACCACTGCAGCATCTGCAACAGGT...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGCACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATCACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGCACCCAGGGCAAGTaGCACAGAACTGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQGTQGK*HRTAQE
Trigger: TTCCTGTGCAGTTCTGTGGCACTTGCCCTGGGTGCC...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ANSSAVSWRRSGSALGKVIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...TACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGAGGAGGCTGCTCCACTaGAGGGATGGTTTCAATTCG +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRRRLLH*RDGFNS
Trigger: CGAATTGAAACCATCCCTGCAGTGGAGCAGCCTCCT...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR CCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSVVCSG*LGVNAL
Trigger: AAGTGCATTTACCCCAAGCCAGCCCGAACACACCAC...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFVVCSG*LGVNAL
Trigger: AAGTGCATTTACCCCAAGCCAGCCCGAACACACCAC...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWLERRR*VVGSGD
Trigger: ATCACCAGACCCCACCACCCACCTTCTCCTTTCGAG...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTGGTGATAAGTCTGGTTaGCAACCGCCTGTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAGDKSG*QPPVVC
Trigger: ACAAACTACAGGCGGTTGCCAACCAGACTTATCACC...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR TCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTTCCCATGGGGCAAGTaGCTAGAAGGTAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDFPWGK*LEGKST
Trigger: GGTGCTCTTACCTTCTAGTCACTTGCCCCATGGGAA...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGCAACAGCGGTGTCACTaGCCCCAAAGGAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWQQRCH*PQRSCR
Trigger: TCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTG...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCCAACAGCGGTGTCACTaGCCCCAAAGGAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSQQRCH*PQRSCR
Trigger: TCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTG...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLALAWGK*TSYRWR
Trigger: TCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAG...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAACCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQTCCRC*SGVFGL
Trigger: CAGCCCGAACACACCACTGCAGCATCTGCAACAGGT...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAACACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTCAGCACACACCTGTTaGAGATGCTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSSAHTC*RCCSGV
Trigger: CACACCACTGCAGCATCTGCAACAGGTGTGTGCTGA...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGCCCAACTTCCATAGCTaGAGTAGACACAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVPNFHS*SRHSPE
Trigger: CTCTGGGCTGTGTCTACTGCAGCTATGGAAGTTGGG...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCTGATGAGAACAGCATaGCATACAGTTAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRLMRTA*HTVRAP
Trigger: GGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAG...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCCTGATGAGAACAGCATaGCATACAGTTAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFLMRTA*HTVRAP
Trigger: GGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAG...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGCATAGCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLHSCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGCTATG...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353979.7
CDS-3UTR CCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTTGCACTTCTTACAGATaGAGACGGTGGCGATATCAT +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLACTSYR*RRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCA...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFKGEGG*WGLVIS
Trigger: ACTTATCACCAGACCCCACCACCCACCTTCTCCTTT...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAATATCATTCCTGCCCTaGGGTGGGTACCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKISFLP*GGYPGG
Trigger: TCCGCCTGGGTACCCACCCCAGGGCAGGAATGATAT...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTACAGATGGAGACGGTaGCGATATCATTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFYRWRR*RYHSCP
Trigger: AGGGCAGGAATGATATCGCCACCGTCTCCATCTGTA...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAACAACAGCGGTGTCACTaGCCCCAAAGGAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQQQRCH*PQRSCR
Trigger: TCTACAACTCCTTTGGGGGCAGTGACACCGCTGTTG...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTCACACCTGTTGCAGATaGTGCAGTGGTGTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFHTCCR*CSGVFG
Trigger: CCCGAACACACCACTGCAGCATCTGCAACAGGTGTG...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAATCAGCACACACCTGTTaGAGATGCTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQSAHTC*RCCSGV
Trigger: CACACCACTGCAGCATCTGCAACAGGTGTGTGCTGA...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp AAAGGCTGGTCCTTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: KGWSLNCPAWYPKAGPLAVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...AGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAAGGACCAGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGCAGGCCTGGTATCTTTaGCCTGTTGAGAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWQAWYL*PVEKPR
Trigger: TCTTGGCTTCTCAACAGGGCAAAGATACCAGGCCTG...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAGAAACTGGAGGAGGCTaGTCCACTGCAGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKETGGG*STAGMV
Trigger: AACCATCCCTGCAGTGGAGCAGCCTCCTCCAGTTTC...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR CCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWVFGLA*GKCTSY
Trigger: GTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACAC...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQVVCSG*LGVNAL
Trigger: AAGTGCATTTACCCCAAGCCAGCCCGAACACACCAC...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAACTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKLERRR*VVGSGD
Trigger: ATCACCAGACCCCACCACCCACCTTCTCCTTTCGAG...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATGCTCCACTGCAGGGATaGTTTCAATTCGGTAACTGG +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDAPLQG*FQFGNW
Trigger: CCAGTTACCGAATTGAAACCATCCCTGCAGTGGAGC...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR TCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAATTCCCATGGGGCAAGTaGCTAGAAGGTAAGAGCACC +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKFPWGK*LEGKST
Trigger: GGTGCTCTTACCTTCTAGTCACTTGCCCCATGGGAA...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGGTATCTTTGCCCTGTTaGGAAGCCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVVSLPC*EAKISA
Trigger: AGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATAC...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAATCAGCACACACCTGTTaGAGATGCTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKSAHTC*RCCSGV
Trigger: CACACCACTGCAGCATCTGCAACAGGTGTGTGCTGA...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAACCCAACTTCCATAGCTaGAGTAGACACAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKPNFHS*SRHSPE
Trigger: CTCTGGGCTGTGTCTACTGCAGCTATGGAAGTTGGG...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGAACTTCCATAGCTGTTaGAGATGCTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVNFHSC*RCCSGV
Trigger: CACACCACTGCAGCATCTGCAACAGCTATGGAAGTT...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353979.7
CDS-3UTR GCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTAATGACCTGGAGGGATaGAGAAGTGGAAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFNDLEG*RSGKPG
Trigger: GCCAGGCTTTCCACTTCTGCATCCCTCCAGGTCATT...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR CCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAATACAGATGGAGACGGTaGCGATATCATTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQYRWRR*RYHSCP
Trigger: TGGGCAGGAATGATATCGCCACCGTCTCCATCTGTA...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000345745.9
CDS-3UTR CCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGTGCACTTCTTACAGATaGAGACGGTGGCGATATCAT +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRCTSYR*RRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCA...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKVFGLA*GKCTSY
Trigger: GTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACAC...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFVVCSG*LGVNAL
Trigger: AAGTGCATTTACCCCAAGCCAGCCCGAACACACCAC...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGTGATAAGTCTCAATaGCAGCATAAGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQGDKSQ*QHKPPG
Trigger: TCCGGGAGGCTTATGCTGCCATTGAGACTTATCACC...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
CDS-3UTR CCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKKGEGG*WGLVIS
Trigger: ACTTATCACCAGACCCCACCACCCACCTTCTCCTTT...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGCTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAATTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGATTCCTGCCCTGGGGTaGGTACCCAGGCGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKIPALG*VPRRSG
Trigger: ACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAAT...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGGGTGATAAGTCTGGTTaGCAACCGCCTGTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLGDKSG*QPPVVC
Trigger: ACAAACTACAGGCGGTTGCCAACCAGACTTATCACC...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR TCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKCHHRG*VSSHPG
Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCA...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAAAAAGGCTGGTCCTTaGATTGTCCTGCATGGTACC +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKKKAGP*IVLHGT
Trigger: GGTACCATGCAGGACAATTCAAGGACCAGCCTTTTT...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
48% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAGAACTTCTGTTTGCCTaGGTAAAGGGATGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKELLFA*VKGCQS
Trigger: GGACTGACATCCCTTTACTCAGGCAAACAGAAGTTC...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAGTATCTTTGCCCTGTTaGGAAGCCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKVSLPC*EAKISA
Trigger: AGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATAC...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVLAWGK*TSYRWR
Trigger: TCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAG...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCACCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCTCCRC*SGVFGL
Trigger: CAGCCCGAACACACCACTGCAGCATCTGCAACAGGT...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAACTGATGAGAACAGCATaGCATACAGTTAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKLMRTA*HTVRAP
Trigger: GGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAG...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp GTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VLHGTLRQAHWLFLIKDSSFLLM*LSMLVS
Trigger: TGAGACTAGCATCGAAAGGCACATCAACAAGAAGGA...AGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRSFLLM*LSMLVS
Trigger: TGAGACTAGCATCGAAAGGCACATCAACAAGAAGGA...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAACAGGCCTGGTATCTTTaGCCTGTTGAGAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKQAWYL*PVEKPR
Trigger: TCTTGGCTTCTCAACAGGGCAAAGATACCAGGCCTG...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAGGCACCCAGGGCAAGTaGCACAGAACTAAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKGTQGK*HRTKKR
Trigger: TCTTTTCTTAGTTCTGTGGCACTTGCCCTGGGTGCC...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370846.8
CDS-3UTR CCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCACTTCTTACAGATaGAGACGGTGGCGATATCAT +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSCTSYR*RRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCA...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTGCACTTCTTACAGATaGAGACGGTGGCGATATCAT +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDCTSYR*RRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCA...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAGGTGATAAGTCTCAATaGCAGCATAAGCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKGDKSQ*QHKPPG
Trigger: TCCGGGAGGCTTATGCTGCCATTGAGACTTATCACC...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFKGEGG*WGLVIS
Trigger: ACTTATCACCAGACCCCACCACCCACCTTCTCCTTT...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKKGEGG*WGLVIS
Trigger: ACTTATCACCAGACCCCACCACCCACCTTCTCCTTT...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAACTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTTTGAATTGTCCTGCATaGTACCCTAAGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFLNCPA*YPKAGP
Trigger: TGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAATACAGATGGAGACGGTaGCGATATCATTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKYRWRR*RYHSCP
Trigger: AGGGCAGGAATGATATCGCCACCGTCTCCATCTGTA...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTCAGAAGTGGAAAGCCTaGCCAGATGTCTATCTGTCC +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFQKWKA*PDVYLS
Trigger: GGACAGATAGACATCTGGCCAGGCTTTCCACTTCTG...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR TCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGTGCTCGAGTCGTGGCTaGCACAGTCCAGCTCACACT +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKCSSRG*HSPAHT
Trigger: AGTGTGAGCTGGACTGTGTCAGCCACGACTCGAGCA...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCGCCCTTGGAGGCCCTTaGAATAACATAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCALGGP*NNIGSR
Trigger: TCTGCTCCCTATGTTATTTCAAGGGCCTCCAAGGGC...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAATTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTGTATCTTTGCCCTGTTaGGAAGCCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFVSLPC*EAKISA
Trigger: AGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATAC...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCTGGCGATATCATTCCTaGCCACTCCAAACCAGCGGA +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCWRYHS*PLQTSG
Trigger: TCCGCTGGTTTGGAGTGGGCAGGAATGATATCGCCA...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345745.9
CDS-3UTR GCA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVSFLLM*LSMLVS
Trigger: TGAGACTAGCATCGAAAGGCACATCAACAAGAAGGA...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCGAATACCTTTATTTGTaGTCCCTTAAGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFEYLYL*SLKQHV
Trigger: CACATGCTGCTTAAGGGAGCACAAATAAAGGTATTC...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAACTAAGGCAGGCCCACTaGCTCTTTTTGATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKLRQAH*LFLIKD
Trigger: ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAG...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGTCCAGTGCTGTATCCTaGAGGAGGTCCGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKSSAVS*RRSGSA
Trigger: TGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAACCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAACTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKLAWGK*TSYRWR
Trigger: TCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAG...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAATCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQSFLLM*LSMLVS
Trigger: TGAGACTAGCATCGAAAGGCACATCAACAAGAAGGA...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGACCCGAGTAAGCCAGTaGCTTCCTGTATCCACACCC +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKTRVSQ*LPVSTP
Trigger: GGGTGTGGATACAGGAAGGCACTGGCTTACTCGGGT...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCCAGGCCTGGTATCTTTaGCCTGTTGAGAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCQAWYL*PVEKPR
Trigger: TCTTGGCTTCTCAACAGGGCAAAGATACCAGGCCTG...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR GCA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCGAATACCTTTATTTGTaGTCCCTTAAGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSEYLYL*SLKQHV
Trigger: CACATGCTGCTTAAGGGAGCACAAATAAAGGTATTC...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR GCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTCAGCAAGGACACTCCTaGCAATGTGGTAACACTAAA +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFQQGHS*QCGNTK
Trigger: TTTAGTGTTACCACATTGGCAGGAGTGTCCTTGCTG...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR CCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAATGCACTTCTTACAGATaGAGACGGTGGCGATATCAT +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKCTSYR*RRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCA...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCVFGLA*GKCTSY
Trigger: GTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACAC...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCKGEGG*WGLVIS
Trigger: ACTTATCACCAGACCCCACCACCCACCTTCTCCTTT...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKLERRR*VVGSGD
Trigger: ATCACCAGACCCCACCACCCACCTTCTCCTTTCGAG...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCTACAGATGGAGACGGTaGCGATATCATTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCYRWRR*RYHSCP
Trigger: AGGGCAGGAATGATATCGCCACCGTCTCCATCTGTA...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGATGGTTCCCGGCTCATaGAAGTACTCAATAAATATT +
Preference number: 4 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRMVPGS*KYSINI
Trigger: AATATTTATTGAGTACTTCCATGAGCCGGGAACCAT...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS-3UTR TCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAACCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGTCAGCACACACCTGTTaGAGATGCTGCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKSAHTC*RCCSGV
Trigger: CACACCACTGCAGCATCTGCAACAGGTGTGTGCTGA...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFSFLLM*LSMLVS
Trigger: TGAGACTAGCATCGAAAGGCACATCAACAAGAAGGA...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGCCCCTAGTCTGGGGTTaGAACTTCTGTTTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKPLVWG*NFCLPE
Trigger: CTCAGGCAAACAGAAGTTCCAACCCCAGACTAGGGG...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CCA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTTTCAATTCGGTAACTaGAGTATTGTACTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDFQFGN*SIVLSL
Trigger: CAAGGAGAGTACAATACTCCAGTTACCGAATTGAAA...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR GCA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAGAATACCTTTATTTGTaGTCCCTTAAGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKEYLYL*SLKQHV
Trigger: CACATGCTGCTTAAGGGAGCACAAATAAAGGTATTC...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKKGEGG*WGLVIS
Trigger: ACTTATCACCAGACCCCACCACCCACCTTCTCCTTT...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGGTATCTTTGCCCTGTTaGGAAGCCAAGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKVSLPC*EAKISA
Trigger: AGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATAC...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCGTTGGAACTTCTGTTTaGCTGAGTAAAGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCVGTSV*LSKGMS
Trigger: TGACATCCCTTTACTCAGGCAAACAGAAGTTCCAAC...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGTTTGATCAAGGATTCTaGGAAAAGCTGCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKFDQGF*EKLPLE
Trigger: CTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAA...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR TCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGCCCACTGGCTCTTTTTaGTCAAGGATTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKPTGSF*SRILRK
Trigger: TTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGG...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGATTGTGTCTTTCTTCTaGAGTGGTAAAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKIVSFF*SGKKAG
Trigger: ACCAGCCTTTTTACCACTGCAGAAGAAAGACACAAT...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR GCA 90 bp ATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCAGTGGTAAAAAGGAATACCTTTATTTGTaGTCCCTTAAGCAGCATGTG +
Preference number: 4 (lower is better)
Translates to: MSVLRFLHIVSFFCSGKKEYLYL*SLKQHV
Trigger: CACATGCTGCTTAAGGGAGCACAAATAAAGGTATTC...CTTTTTACCACTGCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS GCA 90 bp CACTGCCCCCAAAGGAGTTGTAGAGCAGGGAGCGCAGGCAGACCTTaGCGTAGCGCCAGCGCTGTACTAGACCCCGGAGTAGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: HCPQRSCRAGSAGRP*RSASAVLDPGVEVD
Trigger: GTCCACCTCTACTCCGGGGTCTAGTACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCGCTCCCTGCTCTACAACTCCTTTGGGGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000420089.5
ENST00000433086.5
ENST00000462924.5
ENST00000492610.5
ENST00000495735.5
CDS-3UTR CAA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTTTCAGCACACACCTGTaGCAGATGCTGCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGFSTHL*QMLQWC
Trigger: ACACCACTGCAGCATCTGCAACAGGTGTGTGCTGAA...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCCTAAATACTCTGCCCTaGGCCTGTAGCCGACGTCTC +
Preference number: 5 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSLNTLP*ACSRRL
Trigger: GAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCCTAAATACTCTGCCCTaGGCCTGTAGCCGACGTCTC +
Preference number: 5 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSLNTLP*ACSRRL
Trigger: GAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGTATTGTACTCTCCTaGCACCCTGGCTCATCCCCA +
Preference number: 5 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGSIVLS*HPGSSP
Trigger: TGGGGATGAGCCAGGGTGCAAGGAGAGTACAATACT...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS CCA 90 bp AGTGGTGTGTTCGGGCTGGCTTGGGGTAAATGCACTTCTTACAGATaGAGACGGTGGCGATATCATTCCTGCCCTGCCGCCTGCCGACTC +
Preference number: 5 (lower is better)
Translates to: SGVFGLAWGKCTSYR*RRWRYHSCPAACRL
Trigger: GAGTCGGCAGGCGGCAGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459777.5
ENST00000466895.5
CDS-3UTR CAA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTGCAACCGCCTGTAGTTaGTTCTTGTCGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGATACS*FLSSCF
Trigger: GAAACAGCTCGACAAGAACAAACTACAGGCGGTTGC...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS CCA 90 bp AGTGGTGTGTTCGGGCTGGCTTGGGGTAAATGCACTTCTTACAGATaGAGACGGTGGCGATATCATTCCTGCCCTGGGGTGGGTACCCAG +
Preference number: 5 (lower is better)
Translates to: SGVFGLAWGKCTSYR*RRWRYHSCPGVGTQ
Trigger: CTGGGTACCCACCCCAGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000462924.5
ENST00000495735.5
CDS-3UTR CAA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCGGGAGGGCTTTGTCCTaGACAATCCCACTGACTTAT +
Preference number: 5 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSGRALS*TIPLTY
Trigger: ATAAGTCAGTGGGATTGTCAAGGACAAAGCCCTCCC...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS TCA 90 bp TGGCGATATCATTCCTGCCCTGGGGTGGGTACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGAAGACAATCAGGATCAGATTCCAGT +
Preference number: 5 (lower is better)
Translates to: WRYHSCPGVGTQAEW*WPGSSGRQSGSDSS
Trigger: ACTGGAATCTGATCCTGATTGTCTTCCACTACTACCAGGCCATCACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAATGATATCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000462924.5
ENST00000492610.5
ENST00000495735.5
CDS GCA 90 bp ACTCTGCCCTTGGCCTGTAGCCGACGTCTCTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCACCTCGACTGCACAGGAACCAGAGG +
Preference number: 5 (lower is better)
Translates to: TLPLACSRRLSFLLM*LSMLVSPRLHRNQR
Trigger: CCTCTGGTTCCTGTGCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
CDS CCA 90 bp GACCAGCATCCTGCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTTCTTACAGATGGAGACGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: DQHPAVADAAVVCSG*LGVNALLTDGDGGD
Trigger: ATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCAGGATGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS-3UTR CAA 90 bp TCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTAGGTAGCCGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: SSAVSWRRSGSALGKVGSRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...GCTACCTACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp AGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCCGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: RRGGGQLQCCILEEVRVSRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...GCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS TCA 90 bp CCTGTGAGGAAGGGACACAGGCTCTGTTACGGTGGCCAAAGTTCTTaGGATGTCAGTGCCAATCCTTCCCTACAAGGACCAGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: PVRKGHRLCYGGQSS*DVSANPSLQGPASC
Trigger: GCAGGATGCTGGTCCTTGTAGGGAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGCCTGTGTCCCTTCCTCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS GCA 90 bp TGCAGGGATGGTTTCAATTCGGTAACTGGAGTATTGTACTCTCCTTaGACCCTGGCTCATCCCCACAAAAGACCTGCCGCCTGCCGACTC +
Preference number: 5 (lower is better)
Translates to: CRDGFNSVTGVLYSP*TLAHPHKRPAACRL
Trigger: GAGTCGGCAGGCGGCAGGTCTTTTGTGGGGATGAGCCAGGGTGCAAGGAGAGTACAATACTCCAGTTACCGAATTGAAACCATCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393760.6
ENST00000414567.5
CDS GCA 90 bp GCCAATCCTTCCCTACAAGGACCAGCATCCTGCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTGGCTTGGGGTAAATGCACTTCTTAC +
Preference number: 5 (lower is better)
Translates to: ANPSLQGPASCCCRC*SGVFGLAWGKCTSY
Trigger: GTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCAGGATGCTGGTCCTTGTAGGGAAGGATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CCA 90 bp AGTGGTGTGTTCGGGCTGGCTTGGGGTAAATGCACTTCTTACAGATaGAGACGGTGGCGATATCATTCCTGCCCACTCCAAACCAGCGGA +
Preference number: 5 (lower is better)
Translates to: SGVFGLAWGKCTSYR*RRWRYHSCPLQTSG
Trigger: TCCGCTGGTTTGGAGTGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345745.9
ENST00000433086.5
CDS CCA 90 bp CTTCAGCACACACCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTTCTTACAGATGGAGACGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: LQHTPVADAAVVCSG*LGVNALLTDGDGGD
Trigger: ATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGGTGTGTGCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000433086.5
ENST00000459777.5
ENST00000466895.5
CDS TCA 90 bp CAGATTCCAGTGGCTATAGAAGAAATGCCAGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAGAGGCAGGACACACAGGTAGGCGAT +
Preference number: 5 (lower is better)
Translates to: QIPVAIEEMPAESWH*VGSEDERQDTQVGD
Trigger: ATCGCCTACCTGTGTGTCCTGCCTCTCATCCTCCGAACCTACTCAGTGCCACGACTCTGCTGGCATTTCTTCTATAGCCACTGGAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000462924.5
ENST00000492610.5
ENST00000495735.5
CDS GCA 90 bp TGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGACGGTGGCGATATCATTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: CCRCCSGVFGLAWGK*TSYRWRRWRYHSCP
Trigger: TGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345745.9
ENST00000433086.5
CDS GCA 90 bp ATGTGCCTTTCGATGCTAGTCTCACCTCGACTGATGAGAACAGCATaGCATACAGTTAGGGCACCCAGGGCAAGTGCCACAGAACTGCAC +
Preference number: 5 (lower is better)
Translates to: MCLSMLVSPRLMRTA*HTVRAPRASATELH
Trigger: GTGCAGTTCTGTGGCACTTGCCCTGGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAGTCGAGGTGAGACTAGCATCGAAAGGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000433086.5
ENST00000466895.5
ENST00000495735.5
CDS GCA 90 bp ACTCTGCCCTTGGCCTGTAGCCGACGTCTCTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCACCTCGACTGATGAGAACAGCATGC +
Preference number: 5 (lower is better)
Translates to: TLPLACSRRLSFLLM*LSMLVSPRLMRTAC
Trigger: GCATGCTGTTCTCATCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000462924.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS GCA 90 bp TGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGACGGTGGCGATATCATTCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: CCRCCSGVFGLAWGK*TSYRWRRWRYHSCP
Trigger: AGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
ENST00000462924.5
ENST00000466895.5
ENST00000495735.5
CDS GCA 90 bp GGGACACAGGCTCTGTTACGGTGGCCAAAGTTCTTGAGATGTCAGTaGCAATCCTTCCCTACAAGGACCAGCATCCTGCTGTTGCAGATG +
Preference number: 5 (lower is better)
Translates to: GTQALLRWPKFLRCQ*QSFPTRTSILLLQM
Trigger: CATCTGCAACAGCAGGATGCTGGTCCTTGTAGGGAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGCCTGTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CCA 90 bp GCACACACCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTACAGATGGAGACGGTGGCGATATCAT +
Preference number: 5 (lower is better)
Translates to: AHTCCRCCSGVFGLA*GKCTSYRWRRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGGTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000433086.5
ENST00000459777.5
ENST00000466895.5
CDS CCA 90 bp CCAACTTCCATAGCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTTCTTACAGATGGAGACGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: PTSIAVADAAVVCSG*LGVNALLTDGDGGD
Trigger: ATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCTATGGAAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353979.7
CDS CCA 90 bp GCATCCTGCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTACAGATGGAGACGGTGGCGATATCAT +
Preference number: 5 (lower is better)
Translates to: ASCCCRCCSGVFGLA*GKCTSYRWRRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS-3UTR CAA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCTAAATACTCTGCCCTaGGCCTGTAGCCGACGTCTC +
Preference number: 5 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRLNTLP*ACSRRL
Trigger: GAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp GGCCAACTCCAGTGCTGTATCCTGGAGGAGGTCCGGGTCAGCACTGGGCAAGGTATCGAATACCTTTATTaGTGCTCCCTTAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: GQLQCCILEEVRVSTGQGIEYLY*CSLKQH
Trigger: ATGCTGCTTAAGGGAGCACAAATAAAGGTATTCGAT...ACCTTGCCCAGTGCTGACCCGGACCTCCTCCAGGATACAGCACTGGAGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS CCA 90 bp GACAAGACTCTTGTGAGTCATCCTTTCTCGAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGTCTCAATGGCAGCATAAGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: DKTLVSHPFSKGEGG*WGLVISLNGSISLP
Trigger: CGGGAGGCTTATGCTGCCATTGAGACTTATCACCAGACCCCACCACCCACCTTCTCCTTTCGAGAAAGGATGACTCACAAGAGTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
ENST00000487315.1
CDS CCA 90 bp GGTAGACAAGACTCTTGTGAGTCATCCTTTCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGATAAGTCTGGTTGGCAACCGCCTGTA +
Preference number: 5 (lower is better)
Translates to: GRQDSCESSFLERRR*VVGSGDKSGWQPPV
Trigger: TACAGGCGGTTGCCAACCAGACTTATCACCAGACCCCACCACCCACCTTCTCCTTTCGAGAAAGGATGACTCACAAGAGTCTTGTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000433086.5
ENST00000459777.5
ENST00000466895.5
ENST00000495735.5
CDS CCA 90 bp TCTTCAGCACACACCTGTGAGGAAGGGACACAGGCTCTGTTACGGTaGCCAAAGTTCTTGAGATGTCAGTGCCAATCCTTCCCTACAAGG +
Preference number: 5 (lower is better)
Translates to: SSAHTCEEGTQALLR*PKFLRCQCQSFPTR
Trigger: CCTTGTAGGGAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGCCTGTGTCCCTTCCTCACAGGTGTGTGCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS-3UTR CAA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTTCAGCACACACCTGTaGCAGATGCTGCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFFSTHL*QMLQWC
Trigger: ACACCACTGCAGCATCTGCAACAGGTGTGTGCTGAA...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp GGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCCTAAATACTCTGCCCTaGGCCTGTAGCCGACGTCTC +
Preference number: 5 (lower is better)
Translates to: GTLRQAHWLFLIKDSEKSLNTLP*ACSRRL
Trigger: GAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG...GCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGCTAAATACTCTGCCCTaGGCCTGTAGCCGACGTCTC +
Preference number: 5 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVLNTLP*ACSRRL
Trigger: GAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS GCA 90 bp ATGTGCCTTTCGATGCTAGTCTCACCTCGACTGATGAGAACAGCATaGCATACAGTTAGGGCACCCAGGGCAAGTGCCACAGAACTAAGA +
Preference number: 5 (lower is better)
Translates to: MCLSMLVSPRLMRTA*HTVRAPRASATELR
Trigger: TCTTAGTTCTGTGGCACTTGCCCTGGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAGTCGAGGTGAGACTAGCATCGAAAGGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370846.8
ENST00000462924.5
ENST00000487315.1
CDS CCA 90 bp TTCCATAGCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTACAGATGGAGACGGTGGCGATATCAT +
Preference number: 5 (lower is better)
Translates to: FHSCCRCCSGVFGLA*GKCTSYRWRRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCTATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353979.7
CDS CCA 90 bp GGTAGACAAGACTCTTGTGAGTCATCCTTTCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGATAAGTCTCAATGGCAGCATAAGCCT +
Preference number: 5 (lower is better)
Translates to: GRQDSCESSFLERRR*VVGSGDKSQWQHKP
Trigger: AGGCTTATGCTGCCATTGAGACTTATCACCAGACCCCACCACCCACCTTCTCCTTTCGAGAAAGGATGACTCACAAGAGTCTTGTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
ENST00000487315.1
CDS CCA 90 bp CTCAAAACCCAACAGAAACTGGAGGAGGCTGCTCCACTGCAGGGATaGTTTCAATTCGGTAACTGGAGTATTGTACTCTCCTTGCACCCT +
Preference number: 5 (lower is better)
Translates to: LKTQQKLEEAAPLQG*FQFGNWSIVLSLHP
Trigger: AGGGTGCAAGGAGAGTACAATACTCCAGTTACCGAATTGAAACCATCCCTGCAGTGGAGCAGCCTCCTCCAGTTTCTGTTGGGTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393760.6
ENST00000414567.5
CDS-3UTR CAA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAATTCAGCACACACCTGTaGCAGATGCTGCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQFSTHL*QMLQWC
Trigger: ACACCACTGCAGCATCTGCAACAGGTGTGTGCTGAA...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp CAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: QAHWLFLIKDSEKSCPWRRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...CCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp GGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGTTTTTCAGCACACACCTGTaGCAGATGCTGCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GIFALLRSQDLSCTSQVFFSTHL*QMLQWC
Trigger: ACACCACTGCAGCATCTGCAACAGGTGTGTGCTGAA...AAACACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAATTCAGCACACACCTGTaGCAGATGCTGCAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKFSTHL*QMLQWC
Trigger: ACACCACTGCAGCATCTGCAACAGGTGTGTGCTGAA...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGCGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp TTTTTCAGACAGCAAGTAGAAGAGGTGGTGGCCAACTCCAGTGCTGTATCCTGGCGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: FFRQQVEEVVANSSAVSWRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...CCAGGATACAGCACTGGAGTTGGCCACCACCTCTTCTACTTGCTGTCTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGCGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGCAACCGCCTGTAGTTaGTTCTTGTCGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQATACS*FLSSCF
Trigger: GAAACAGCTCGACAAGAACAAACTACAGGCGGTTGC...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR CAA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAGCAACCGCCTGTAGTTaGTTCTTGTCGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKATACS*FLSSCF
Trigger: GAAACAGCTCGACAAGAACAAACTACAGGCGGTTGC...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR CAA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAATCGGTAACTGGAGTATaGTACTCTCCTTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQSVTGV*YSPCTL
Trigger: CAGGGTGCAAGGAGAGTACAATACTCCAGTTACCGA...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393760.6
CDS-3UTR CAA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAACGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCCTAAATACTCTGCCCTaGGCCTGTAGCCGACGTCTC +
Preference number: 5 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCLNTLP*ACSRRL
Trigger: GAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp TGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCGCCTGTAGTTTGTTCTaGTCGAGCTGTTTCATTTTC +
Preference number: 5 (lower is better)
Translates to: CPAWYPKAGPLALFDQGFACSLF*SSCFIF
Trigger: GAAAATGAAACAGCTCGACAAGAACAAACTACAGGC...GAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR CAA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAGCAACCGCCTGTAGTTaGTTCTTGTCGAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKATACS*FLSSCF
Trigger: GAAACAGCTCGACAAGAACAAACTACAGGCGGTTGC...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR CAA 90 bp ATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATGCCTGTAGTTTGTTCTaGTCGAGCTGTTTCATTTTC +
Preference number: 5 (lower is better)
Translates to: IVLHGTLRQAHWLFLIKDACSLF*SSCFIF
Trigger: GAAAATGAAACAGCTCGACAAGAACAAACTACAGGC...ATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR CAA 90 bp CCTGGTATCTTTGCCCTGTTGAGAAGCCAAGATCTCAGCTGTACTAGTCAGGTGATCGAATACCTTTATTaGTGCTCCCTTAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: PGIFALLRSQDLSCTSQVIEYLY*CSLKQH
Trigger: ATGCTGCTTAAGGGAGCACAAATAAAGGTATTCGAT...CACCTGACTAGTACAGCTGAGATCTTGGCTTCTCAACAGGGCAAAGATACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CAA 90 bp CACTGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGATCGAATACCTTTATTaGTGCTCCCTTAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HWLFLIKDSEKSCPWRPLIEYLY*CSLKQH
Trigger: ATGCTGCTTAAGGGAGCACAAATAAAGGTATTCGAT...CAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CAA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGCCTGTAGTTTGTTCTaGTCGAGCTGTTTCATTTTC +
Preference number: 5 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQACSLF*SSCFIF
Trigger: GAAAATGAAACAGCTCGACAAGAACAAACTACAGGC...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS-3UTR CAA 90 bp CTGAGTAAAGGGATGTCAGTCCTAAGATTTCTCCACATTGTGTCTTTCTTCTGCCGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTA +
Preference number: 5 (lower is better)
Translates to: LSKGMSVLRFLHIVSFFCRLSFL*MCLSML
Trigger: TAGCATCGAAAGGCACATCAACAAGAAGGAGAGACG...GCAGAAGAAAGACACAATGTGGAGAAATCTTAGGACTGACATCCCTTTACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
CDS-3UTR CAA 90 bp TTGAATTGTCCTGCATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAATCGAATACCTTTATTaGTGCTCCCTTAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LNCPAWYPKAGPLALFDQIEYLY*CSLKQH
Trigger: ATGCTGCTTAAGGGAGCACAAATAAAGGTATTCGAT...TTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATGCAGGACAATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CAA 90 bp CATGGTACCCTAAGGCAGGCCCACTGGCTCTTTTTGATCAAGGATTCTGAGAAAATCGAATACCTTTATTaGTGCTCCCTTAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HGTLRQAHWLFLIKDSEKIEYLY*CSLKQH
Trigger: ATGCTGCTTAAGGGAGCACAAATAAAGGTATTCGAT...TTTCTCAGAATCCTTGATCAAAAAGAGCCAGTGGGCCTGCCTTAGGGTACCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370854.7
ENST00000393760.6
CDS-3UTR CAA 90 bp TGGCTCTTTTTGATCAAGGATTCTGAGAAAAGCTGCCCTTGGAGGCCCTTGAAAGCCTGTAGTTTGTTCTaGTCGAGCTGTTTCATTTTC +
Preference number: 5 (lower is better)
Translates to: WLFLIKDSEKSCPWRPLKACSLF*SSCFIF
Trigger: GAAAATGAAACAGCTCGACAAGAACAAACTACAGGC...TTTCAAGGGCCTCCAAGGGCAGCTTTTCTCAGAATCCTTGATCAAAAAGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
CDS CCA 72 bp AGGCAGAGGCGGGCCGGGCCCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGCCGCCTGCCGACTCCCC +
Preference number: 6 (lower is better)
Translates to: RQRRAGPSSRLR*PRMVPAACRLP
Trigger: GGGGAGTCGGCAGGCGGCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCTGGGCCCGGCCCGCCTCTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370846.8
ENST00000370854.7
ENST00000462924.5
CDS CCA 72 bp AGGCAGAGGCGGGCCGGGCCCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCCGGCTCATGGAAGTACTCA +
Preference number: 6 (lower is better)
Translates to: RQRRAGPSSRLR*PRMVPGSWKYS
Trigger: TGAGTACTTCCATGAGCCGGGAACCATGCGAGGCCAGCGGAGCCTGCTGCTGGGCCCGGCCCGCCTCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370842.6
CDS CCA 72 bp AGGCAGAGGCGGGCCGGGCCCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTGATTTTGCCCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: RQRRAGPSSRLR*PRMVPDFALRQ
Trigger: CTGCCTCAGGGCAAAATCAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCTGGGCCCGGCCCGCCTCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393760.6
ENST00000414567.5
ENST00000433086.5
CDS CCA 72 bp AGGCAGAGGCGGGCCGGGCCCAGCAGCAGGCTCCGCTaGCCTCGCATGGTTCCTTCAGATGATTATTCCTCA +
Preference number: 6 (lower is better)
Translates to: RQRRAGPSSRLR*PRMVPSDDYSS
Trigger: TGAGGAATAATCATCTGAAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCTGGGCCCGGCCCGCCTCTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492610.5
CDS TCA 72 bp CTGACACAGTCCAGCTCACACTGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGGAGGGGGCTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: LTQSSSHCHHRG*VSSHPGRGLPA
Trigger: AGCTGGGAGCCCCCTCCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCAGTGTGAGCTGGACTGTGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS TCA 72 bp GGGGGCTCCCAGCTCATTCCATTCCCATGGGGCAAGTaGCTAGAAGGTAAGAGCACCCGAGTAAGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: GGSQLIPFPWGK*LEGKSTRVSQC
Trigger: GCACTGGCTTACTCGGGTGCTCTTACCTTCTAGTCACTTGCCCCATGGGAATGGAATGAGCTGGGAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS TCA 72 bp CATTCCTGCCCTGGGGTGGGTACCCAGGCGGAGTGGTaGTGGCCTGGTAGTAGTGGAAGACAATCAGGATCA +
Preference number: 6 (lower is better)
Translates to: HSCPGVGTQAEW*WPGSSGRQSGS
Trigger: TGATCCTGATTGTCTTCCACTACTACCAGGCCATCACCACTCCGCCTGGGTACCCACCCCAGGGCAGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000462924.5
ENST00000492610.5
ENST00000495735.5
CDS GCA 72 bp TCCCTACAAGGACCAGCATCCTGCTGTTGCAGATGCTaGAGTGGTGTGTTCGGGCTGGCTTGGGGTAAATGC +
Preference number: 6 (lower is better)
Translates to: SLQGPASCCCRC*SGVFGLAWGKC
Trigger: GCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCAGGATGCTGGTCCTTGTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CCA 72 bp GCTTGGGGTAAATGCACTTCTTACAGATGGAGACGGTaGCGATATCATTCCTGCCCTGCCGCCTGCCGACTC +
Preference number: 6 (lower is better)
Translates to: AWGKCTSYRWRR*RYHSCPAACRL
Trigger: GAGTCGGCAGGCGGCAGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459777.5
ENST00000466895.5
CDS CCA 72 bp TTCGGGCTGGCTTGGGGTAAATGCACTTCTTACAGATaGAGACGGTGGCGATATCATTCCTGCCCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: FGLAWGKCTSYR*RRWRYHSCPAA
Trigger: GGCGGCAGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000459777.5
ENST00000466895.5
CDS CCA 72 bp ACTCTAGACACTGCTCTCCAAGTGAGAGGTGACTGGTaGCCACCATATCCTACACCCAGAGGCCCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: TLDTALQVRGDW*PPYPTPRGPFL
Trigger: CAGGAAGGGGCCTCTGGGTGTAGGATATGGTGGCCACCAGTCACCTCTCACTTGGAGAGCAGTGTCTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492733.1
CDS CCA 72 bp GCTTGGGGTAAATGCACTTCTTACAGATGGAGACGGTaGCGATATCATTCCTGCCCTGGGGTGGGTACCCAG +
Preference number: 6 (lower is better)
Translates to: AWGKCTSYRWRR*RYHSCPGVGTQ
Trigger: CTGGGTACCCACCCCAGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000462924.5
ENST00000495735.5
CDS CCA 72 bp TTCGGGCTGGCTTGGGGTAAATGCACTTCTTACAGATaGAGACGGTGGCGATATCATTCCTGCCCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: FGLAWGKCTSYR*RRWRYHSCPGV
Trigger: CACCCCAGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000462924.5
ENST00000495735.5
CDS CAA 72 bp CTGCCCTTGGCCTGTAGCCGACGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTAGTCTCACCTCGACTG +
Preference number: 6 (lower is better)
Translates to: LPLACSRRLSFL*MCLSMLVSPRL
Trigger: CAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
ENST00000462924.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS CAA 90 bp CTGCAGGGATGGTTTCAATTCGGTAACTGGAGTATTGTACTCTCCTaGCACCCTGGCTCATCCCCACAAAAGACCTGCCGCCTGCCGACT +
Preference number: 6 (lower is better)
Translates to: LQGWFQFGNWSIVLS*HPGSSPQKTCRLPT
Trigger: AGTCGGCAGGCGGCAGGTCTTTTGTGGGGATGAGCCAGGGTGCAAGGAGAGTACAATACTCCAGTTACCGAATTGAAACCATCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393760.6
ENST00000414567.5
CDS TCA 72 bp GTGGCTATAGAAGAAATGCCAGCAGAGTCGTGGCACTaGGTAGGTTCGGAGGATGAGAGGCAGGACACACAG +
Preference number: 6 (lower is better)
Translates to: VAIEEMPAESWH*VGSEDERQDTQ
Trigger: CTGTGTGTCCTGCCTCTCATCCTCCGAACCTACTCAGTGCCACGACTCTGCTGGCATTTCTTCTATAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000462924.5
ENST00000492610.5
ENST00000495735.5
CDS GCA 72 bp TCGATGCTAGTCTCACCTCGACTGATGAGAACAGCATaGCATACAGTTAGGGCACCCAGGGCAAGTGCCACA +
Preference number: 6 (lower is better)
Translates to: SMLVSPRLMRTA*HTVRAPRASAT
Trigger: TGTGGCACTTGCCCTGGGTGCCCTAACTGTATGGCATGCTGTTCTCATCAGTCGAGGTGAGACTAGCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000433086.5
ENST00000462924.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS GCA 72 bp TTGGCCTGTAGCCGACGTCTCTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCACCTCGACTGCACAGG +
Preference number: 6 (lower is better)
Translates to: LACSRRLSFLLM*LSMLVSPRLHR
Trigger: CCTGTGCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
CDS CCA 72 bp TGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTGGCTTaGGGTAAATGCACTTCTTACAGATGGAGACGGTGG +
Preference number: 6 (lower is better)
Translates to: CCRCCSGVFGLA*GKCTSYRWRRW
Trigger: CCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000433086.5
ENST00000459777.5
ENST00000462924.5
ENST00000466895.5
ENST00000495735.5
CDS CCA 72 bp CTTGTGAGTCATCCTTTCTCGAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGTCTGGTTGGCAACCGC +
Preference number: 6 (lower is better)
Translates to: LVSHPFSKGEGG*WGLVISLVGNR
Trigger: GCGGTTGCCAACCAGACTTATCACCAGACCCCACCACCCACCTTCTCCTTTCGAGAAAGGATGACTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000353979.7
ENST00000370854.7
ENST00000393760.6
ENST00000417044.1
ENST00000433086.5
ENST00000459777.5
ENST00000466895.5
ENST00000495735.5
CDS CCA 72 bp CCTGCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTTCTTACAGATGGAGAC +
Preference number: 6 (lower is better)
Translates to: PAVADAAVVCSG*LGVNALLTDGD
Trigger: GTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CAA 90 bp AGGCTGCTCCACTGCAGGGATGGTTTCAATTCGGTAACTGGAGTATaGTACTCTCCTTGCACCCTGGCTCATCCCCACAAAAGACCTGCC +
Preference number: 6 (lower is better)
Translates to: RLLHCRDGFNSVTGV*YSPCTLAHPHKRPA
Trigger: GGCAGGTCTTTTGTGGGGATGAGCCAGGGTGCAAGGAGAGTACAATACTCCAGTTACCGAATTGAAACCATCCCTGCAGTGGAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393760.6
ENST00000414567.5
CDS CAA 90 bp ACCTGTGAGGAAGGGACACAGGCTCTGTTACGGTGGCCAAAGTTCTaGAGATGTCAGTGCCAATCCTTCCCTACAAGGACCAGCATCCTG +
Preference number: 6 (lower is better)
Translates to: TCEEGTQALLRWPKF*RCQCQSFPTRTSIL
Trigger: CAGGATGCTGGTCCTTGTAGGGAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGCCTGTGTCCCTTCCTCACAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CAA 90 bp GTAGCAGGAGATTCCCTGTCTCCTGTCAGGACAGCCAGCTACCCCTaGCATGACAGAAAATGCTTTGTCTCCAATTCCATTCCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VAGDSLSPVRTASYP*HDRKCFVSNSIPSP
Trigger: GGGGCTGGGAATGGAATTGGAGACAAAGCATTTTCTGTCATGCAAGGGGTAGCTGGCTGTCCTGACAGGAGACAGGGAATCTCCTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492610.5
CDS GCA 72 bp TGCTGCAGTGGTGTGTTCGGGCTGGCTTGGGGTAAATaGACTTCTTACAGATGGAGACGGTGGCGATATCAT +
Preference number: 6 (lower is better)
Translates to: CCSGVFGLAWGK*TSYRWRRWRYH
Trigger: ATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000433086.5
ENST00000459777.5
ENST00000462924.5
ENST00000466895.5
ENST00000495735.5
CDS GCA 72 bp GCTCTGTTACGGTGGCCAAAGTTCTTGAGATGTCAGTaGCAATCCTTCCCTACAAGGACCAGCATCCTGCTG +
Preference number: 6 (lower is better)
Translates to: ALLRWPKFLRCQ*QSFPTRTSILL
Trigger: CAGCAGGATGCTGGTCCTTGTAGGGAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CCA 72 bp GCTTGGGGTAAATGCACTTCTTACAGATGGAGACGGTaGCGATATCATTCCTGCCCACTCCAAACCAGCGGA +
Preference number: 6 (lower is better)
Translates to: AWGKCTSYRWRR*RYHSCPLQTSG
Trigger: TCCGCTGGTTTGGAGTGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345745.9
ENST00000433086.5
CDS CCA 72 bp TTCGGGCTGGCTTGGGGTAAATGCACTTCTTACAGATaGAGACGGTGGCGATATCATTCCTGCCCACTCCAA +
Preference number: 6 (lower is better)
Translates to: FGLAWGKCTSYR*RRWRYHSCPLQ
Trigger: TTGGAGTGGGCAGGAATGATATCGCCACCGTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345745.9
ENST00000433086.5
CDS CCA 72 bp ACACCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTTCTTACAGATGGAGAC +
Preference number: 6 (lower is better)
Translates to: TPVADAAVVCSG*LGVNALLTDGD
Trigger: GTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000414567.5
ENST00000417044.1
ENST00000420089.5
ENST00000433086.5
ENST00000459777.5
ENST00000466895.5
CDS CCA 72 bp GCTGCTCCACTGCAGGGATGGTTTCAATTCGGTAACTaGAGTATTGTACTCTCCTTGCACCCTGGCTCATCC +
Preference number: 6 (lower is better)
Translates to: AAPLQGWFQFGN*SIVLSLHPGSS
Trigger: GGATGAGCCAGGGTGCAAGGAGAGTACAATACTCCAGTTACCGAATTGAAACCATCCCTGCAGTGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393760.6
ENST00000414567.5
CDS CCA 72 bp CACACCTGTGAGGAAGGGACACAGGCTCTGTTACGGTaGCCAAAGTTCTTGAGATGTCAGTGCCAATCCTTC +
Preference number: 6 (lower is better)
Translates to: HTCEEGTQALLR*PKFLRCQCQSF
Trigger: GAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGCCTGTGTCCCTTCCTCACAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CAA 72 bp GAAGGGACACAGGCTCTGTTACGGTGGCCAAAGTTCTaGAGATGTCAGTGCCAATCCTTCCCTACAAGGACC +
Preference number: 6 (lower is better)
Translates to: EGTQALLRWPKF*RCQCQSFPTRT
Trigger: GGTCCTTGTAGGGAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGCCTGTGTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS CAA 90 bp CTAAATACTCTGCCCTTGGCCTGTAGCCGACGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTAGTCTCACCTCGACTGCACAGGAAC +
Preference number: 6 (lower is better)
Translates to: LNTLPLACSRRLSFL*MCLSMLVSPRLHRN
Trigger: GTTCCTGTGCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
CDS CAA 90 bp TTCCTAAATACTCTGCCCTTGGCCTGTAGCCGACGTCTCTCCTTCTaGTTGATGTGCCTTTCGATGCTAGTCTCACCTCGACTGCACAGG +
Preference number: 6 (lower is better)
Translates to: FLNTLPLACSRRLSF*LMCLSMLVSPRLHR
Trigger: CCTGTGCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417044.1
ENST00000420089.5
ENST00000459777.5
CDS TCA 72 bp AAGGGACACAGGCTCTGTTACGGTGGCCAAAGTTCTTaGGATGTCAGTGCCAATCCTTCCCTACAAGGACCA +
Preference number: 6 (lower is better)
Translates to: KGHRLCYGGQSS*DVSANPSLQGP
Trigger: TGGTCCTTGTAGGGAAGGATTGGCACTGACATCTCAAGAACTTTGGCCACCGTAACAGAGCCTGTGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462924.5
ENST00000495735.5
CDS GCA 72 bp TTGGCCTGTAGCCGACGTCTCTCCTTCTTGTTGATGTaGCTTTCGATGCTAGTCTCACCTCGACTGATGAGA +
Preference number: 6 (lower is better)
Translates to: LACSRRLSFLLM*LSMLVSPRLMR
Trigger: TCTCATCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000462924.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS CCA 72 bp GACTCTTGTGAGTCATCCTTTCTCGAAAGGAGAAGGTaGGTGGTGGGGTCTGGTGATAAGTCTCAATGGCAG +
Preference number: 6 (lower is better)
Translates to: DSCESSFLERRR*VVGSGDKSQWQ
Trigger: CTGCCATTGAGACTTATCACCAGACCCCACCACCCACCTTCTCCTTTCGAGAAAGGATGACTCACAAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
ENST00000487315.1
CDS CCA 72 bp ATAGCTGTTGCAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGGTAAATGCACTTCTTACAGATGGAGAC +
Preference number: 6 (lower is better)
Translates to: IAVADAAVVCSG*LGVNALLTDGD
Trigger: GTCTCCATCTGTAAGAAGTGCATTTACCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGCAACAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353979.7
CDS CAA 90 bp CTAAATACTCTGCCCTTGGCCTGTAGCCGACGTCTCTCCTTCTTGTaGATGTGCCTTTCGATGCTAGTCTCACCTCGACTGATGAGAACA +
Preference number: 6 (lower is better)
Translates to: LNTLPLACSRRLSFL*MCLSMLVSPRLMRT
Trigger: TGTTCTCATCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000462924.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS CAA 90 bp TTCCTAAATACTCTGCCCTTGGCCTGTAGCCGACGTCTCTCCTTCTaGTTGATGTGCCTTTCGATGCTAGTCTCACCTCGACTGATGAGA +
Preference number: 6 (lower is better)
Translates to: FLNTLPLACSRRLSF*LMCLSMLVSPRLMR
Trigger: TCTCATCAGTCGAGGTGAGACTAGCATCGAAAGGCACATCAACAAGAAGGAGAGACGTCGGCTACAGGCCAAGGGCAGAGTATTTAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000353979.7
ENST00000370842.6
ENST00000370846.8
ENST00000370854.7
ENST00000393760.6
ENST00000462924.5
ENST00000466895.5
ENST00000487315.1
ENST00000495735.5
CDS CAA 90 bp CCTCGCATGGTTCCTGATTTTGCCCTGAGGCAGCCAGGGAGGGCTTaGTCCTTGACAATCCCACTGACTTATTTAACAGGTAGCTCAAAA +
Preference number: 6 (lower is better)
Translates to: PRMVPDFALRQPGRA*SLTIPLTYLTGSSK
Trigger: TTTTGAGCTACCTGTTAAATAAGTCAGTGGGATTGTCAAGGACAAAGCCCTCCCTGGCTGCCTCAGGGCAAAATCAGGAACCATGCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393760.6
ENST00000414567.5
ENST00000433086.5
CDS CCA 72 bp CTTGTGAGTCATCCTTTCTCGAAAGGAGAAGGTGGGTaGTGGGGTCTGGTGATAAGTCTCAATGGCAGCATA +
Preference number: 6 (lower is better)
Translates to: LVSHPFSKGEGG*WGLVISLNGSI
Trigger: TATGCTGCCATTGAGACTTATCACCAGACCCCACCACCCACCTTCTCCTTTCGAGAAAGGATGACTCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345745.9
ENST00000352634.8
ENST00000370842.6
ENST00000420089.5
ENST00000487315.1
CDS CCA 72 bp CAACAGAAACTGGAGGAGGCTGCTCCACTGCAGGGATaGTTTCAATTCGGTAACTGGAGTATTGTACTCTCC +
Preference number: 6 (lower is better)
Translates to: QQKLEEAAPLQG*FQFGNWSIVLS
Trigger: GGAGAGTACAATACTCCAGTTACCGAATTGAAACCATCCCTGCAGTGGAGCAGCCTCCTCCAGTTTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393760.6
ENST00000414567.5
ENST00000433086.5
CDS CAA 72 bp CACTGCAGGGATGGTTTCAATTCGGTAACTGGAGTATaGTACTCTCCTTGCACCCTGGCTCATCCCCACAAA +
Preference number: 6 (lower is better)
Translates to: HCRDGFNSVTGV*YSPCTLAHPHK
Trigger: TTTGTGGGGATGAGCCAGGGTGCAAGGAGAGTACAATACTCCAGTTACCGAATTGAAACCATCCCTGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393760.6
ENST00000414567.5
CDS CAA 72 bp GATTTTGCCCTGAGGCAGCCAGGGAGGGCTTTGTCCTaGACAATCCCACTGACTTATTTAACAGGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: DFALRQPGRALS*TIPLTYLTGSS
Trigger: TGAGCTACCTGTTAAATAAGTCAGTGGGATTGTCAAGGACAAAGCCCTCCCTGGCTGCCTCAGGGCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393760.6
ENST00000414567.5
ENST00000433086.5
CDS CAA 90 bp ATGGTTCCTGATTTTGCCCTGAGGCAGCCAGGGAGGGCTTTGTCCTaGACAATCCCACTGACTTATTTAACAGGTAGCTCAAAACCCAAC +
Preference number: 6 (lower is better)
Translates to: MVPDFALRQPGRALS*TIPLTYLTGSSKPN
Trigger: GTTGGGTTTTGAGCTACCTGTTAAATAAGTCAGTGGGATTGTCAAGGACAAAGCCCTCCCTGGCTGCCTCAGGGCAAAATCAGGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393760.6
ENST00000414567.5
ENST00000433086.5
CDS CAA 90 bp CAAGTGCTCACAGGCATAGAACATCTTTCTCATCACAGTGTTCTGTaGGACAGCATTAGTCTGTGTGTCTTACATTACCTTCCTGTATCC +
Preference number: 6 (lower is better)
Translates to: QVLTGIEHLSHHSVL*DSISLCVLHYLPVS
Trigger: GGATACAGGAAGGTAATGTAAGACACACAGACTAATGCTGTCCAACAGAACACTGTGATGAGAAAGATGTTCTATGCCTGTGAGCACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492733.1
CDS TCA 72 bp GTATTGGCCTCAAGCCTTTCTGGTTCAAATGGACAATaGTCTCTATTCCTAGAGTCTAGAACTGTGCTAACA +
Preference number: 6 (lower is better)
Translates to: VLASSLSGSNGQ*SLFLESRTVLT
Trigger: TGTTAGCACAGTTCTAGACTCTAGGAATAGAGATCATTGTCCATTTGAACCAGAAAGGCTTGAGGCCAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492733.1
CDS CCA 72 bp GTACACAGAATGTGGATCCTGTACCGAGGTATTTCCTaGTGCTATTTAAGTCTTGGCAAAAGATACTCTTCT +
Preference number: 6 (lower is better)
Translates to: VHRMWILYRGIS*CYLSLGKRYSS
Trigger: AGAAGAGTATCTTTTGCCAAGACTTAAATAGCACCAGGAAATACCTCGGTACAGGATCCACATTCTGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492610.5
CDS CCA 72 bp TACTTAAAACCACACAGTATTGGCCTCAAGCCTTTCTaGTTCAAATGGACAATGATCTCTATTCCTAGAGTC +
Preference number: 6 (lower is better)
Translates to: YLKPHSIGLKPF*FKWTMISIPRV
Trigger: GACTCTAGGAATAGAGATCATTGTCCATTTGAACCAGAAAGGCTTGAGGCCAATACTGTGTGGTTTTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492733.1
CDS CAA 72 bp ACAGGCATAGAACATCTTTCTCATCACAGTGTTCTGTaGGACAGCATTAGTCTGTGTGTCTTACATTACCTT +
Preference number: 6 (lower is better)
Translates to: TGIEHLSHHSVL*DSISLCVLHYL
Trigger: AAGGTAATGTAAGACACACAGACTAATGCTGTCCAACAGAACACTGTGATGAGAAAGATGTTCTATGCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492733.1