RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC14 (Homo sapiens)

Ensembl gene IDs: ENSG00000175048

Ensembl transcript IDs: ENST00000340347.7, ENST00000341375.12, ENST00000359775.10, ENST00000414563.6, ENST00000422910.2, ENST00000517432.5, ENST00000518214.5, ENST00000523468.5, ENST00000523706.5

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGTGCCCAGGCCAGGCTTCCCGGGCAGGTGCAGCTCGTCGCTGGTaGGGCTGGGCTCGCTCTGCAGCAGGGGCGTGGCTGCAGCCTGCA +
Preference number: 1 (lower is better)
Translates to: ACPGQASRAGAARRW*GWARSAAGAWLQPA
Trigger: TGCAGGCTGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCTGCCCGGGAAGCCTGGCCTGGGCACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR GCA 90 bp TTCCCGGGCAGGTGCAGCTCGTCGCTGGTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTC +
Preference number: 1 (lower is better)
Translates to: FPGRCSSSLVRLGSL*SRGVAAACKTNLVL
Trigger: GAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCTGCCCGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR TCA 90 bp TATCTCAACACGAGACCTCATCGAGCGGCCAAACAGAAGGTGAAGTaGCACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCCCGG +
Preference number: 1 (lower is better)
Translates to: YLNTRPHRAAKQKVK*HPTRRNPSRPLQPR
Trigger: CCGGGGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGAGGTCTCGTGTTGAGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR TCA 90 bp CACAATATCTCAACACGAGACCTCATCGAGCGGCCAAACAGAAGGTaGAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGC +
Preference number: 1 (lower is better)
Translates to: HNISTRDLIERPNRR*SDTRHDGTPAALCS
Trigger: GCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTaGTTCCAGCATTTTCTGGGCGATGCCATCAGAAGCCCCTGTGTC +
Preference number: 1 (lower is better)
Translates to: GVARQAVPFKVSDQF*FQHFLGDAIRSPCV
Trigger: GACACAGGGGCTTCTGATGGCATCGCCCAGAAAATGCTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp GCTCGCTCTGCAGCAGGGGCGTGGCTGCAGCCTGCAAAACGAATTTaGTGCTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTGTG +
Preference number: 1 (lower is better)
Translates to: ARSAAGAWLQPAKRI*CSECTGLGRTCHSV
Trigger: CACAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTGCAGAGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR TCA 90 bp GCAGCCCCGGTGCCACCTCTCCACAGACGCCTCAGCCCAGTAAGCTaGGTGATGACACTGTCCATTAGTCTCAGTTCGTTGCACTGTCTT +
Preference number: 1 (lower is better)
Translates to: AAPVPPLHRRLSPVS*VMTLSISLSSLHCL
Trigger: AAGACAGTGCAACGAACTGAGACTAATGGACAGTGTCATCACTCAGCTTACTGGGCTGAGGCGTCTGTGGAGAGGTGGCACCGGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR TCA 90 bp TCACATATATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTaGGCTGCCCCTCCGACCATCCCTCCTGACAAACAGAAGTGGGCG +
Preference number: 1 (lower is better)
Translates to: SHICSWEMQSHHLAR*AAPPTIPPDKQKWA
Trigger: CGCCCACTTCTGTTTGTCAGGAGGGATGGTCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATATATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 90 bp TGCAGCAGGGGCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTaGATGCACTGGTCTTGGTCGCACATGTCACTCTGTGACTGCGTG +
Preference number: 1 (lower is better)
Translates to: CSRGVAAACKTNLVL*MHWSWSHMSLCDCV
Trigger: CACGCAGTCACAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR GCA 90 bp CGCTCTGCAGCAGGGGCGTGGCTGCAGCCTGCAAAACGAATTTGGTaGTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTGTGACT +
Preference number: 1 (lower is better)
Translates to: RSAAGAWLQPAKRIW*SECTGLGRTCHSVT
Trigger: AGTCACAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTGCAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR CCA 90 bp CAGGGCACTCACGCTCAGTTCAGCCTTCAAGTGCCGGGAAGCCTGTaGTTCCCTGGAGCACTCCTGGGAGAACGAACGCAGATGAATTTT +
Preference number: 1 (lower is better)
Translates to: QGTHAQFSLQVPGSL*FPGALLGERTQMNF
Trigger: AAAATTCATCTGCGTTCGTTCTCCCAGGAGTGCTCCAGGGAACCACAGGCTTCCCGGCACTTGAAGGCTGAACTGAGCGTGAGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 90 bp CTGGCCCATCAGGTCTCCGCAGGAACATGGCTCATAAAATGGGTTTaGTCCTCACTTGGAACCACAGCTGGCAATCCTAGACAGAGCCGG +
Preference number: 1 (lower is better)
Translates to: LAHQVSAGTWLIKWV*SSLGTTAGNPRQSR
Trigger: CCGGCTCTGTCTAGGATTGCCAGCTGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGACCTGATGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp GAGCAGGTGGAAGAAAGCAAGGAGCAGAGACGGTTTGGGAAGTTGTaGAAGCTCCTTTGTGGGGCTGTCACTTTGGGCTCACAGGTAGCG +
Preference number: 1 (lower is better)
Translates to: EQVEESKEQRRFGKL*KLLCGAVTLGSQVA
Trigger: CGCTACCTGTGAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCTCTGCTCCTTGCTTTCTTCCACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 90 bp AGCGTGGACAAGGAGAATCCCTGTGAGTTGGTGCCTGTGAGCGTGTaGGGTTGTGTAAGGAGGGCACTGCCCCATGAATTACACATTGCA +
Preference number: 1 (lower is better)
Translates to: SVDKENPCELVPVSV*GCVRRALPHELHIA
Trigger: TGCAATGTGTAATTCATGGGGCAGTGCCCTCCTTACACAACCGCACACGCTCACAGGCACCAACTCACAGGGATTCTCCTTGTCCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp GAAGGCCTGGCCCATCAGGTCTCCGCAGGAACATGGCTCATAAAATaGGTTTGCTCCTCACTTGGAACCACAGCTGGCAATCCTAGACAG +
Preference number: 1 (lower is better)
Translates to: EGLAHQVSAGTWLIK*VCSSLGTTAGNPRQ
Trigger: CTGTCTAGGATTGCCAGCTGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGACCTGATGGGCCAGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp TTCAAAGCCACAGAAGGCCTGGCCCATCAGGTCTCCGCAGGAACATaGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACAGCTGGC +
Preference number: 1 (lower is better)
Translates to: FKATEGLAHQVSAGT*LIKWVCSSLGTTAG
Trigger: GCCAGCTGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGACCTGATGGGCCAGGCCTTCTGTGGCTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp CTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGCATTTTCTaGGCGATGCCATCAGAAGCCCCTGTGTCAAGGACACCTACTGCC +
Preference number: 1 (lower is better)
Translates to: LCPSKSLTSSGSSIF*AMPSEAPVSRTPTA
Trigger: GGCAGTAGGTGTCCTTGACACAGGGGCTTCTGATGGCATCGCCCAGAAAATGCTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 90 bp GGTGCCTGTGAGCGTGTGCGGTTGTGTAAGGAGGGCACTGCCCCATaGATTACACATTGCAGGTGGGTACAAGTAGTTAGGTGGTTCAGA +
Preference number: 1 (lower is better)
Translates to: GACERVRLCKEGTAP*ITHCRWVQVVRWFR
Trigger: TCTGAACCACCTAACTACTTGTACCCACCTGCAATGTGTAATTCATGGGGCAGTGCCCTCCTTACACAACCGCACACGCTCACAGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 90 bp CAAACCCCGATCCCTTCTGGTGAACTTAAGACCCTAAGCCGAGGCTaGGAAGCAGTTGGTTCCTGGCATGAAGAGGATGGTTGTAGGCTG +
Preference number: 1 (lower is better)
Translates to: QTPIPSGELKTLSRG*EAVGSWHEEDGCRL
Trigger: CAGCCTACAACCATCCTCTTCATGCCAGGAACCAACTGCTTCTCAGCCTCGGCTTAGGGTCTTAAGTTCACCAGAAGGGATCGGGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 90 bp CTCCTCCCTTGTGCCATTCTGGGCCAGAACAGAGATTTCGCATTTTaGTGGCTTAGGGTGGGGACATGGCATTGTCCTCACAGGCTGAAA +
Preference number: 1 (lower is better)
Translates to: LLPCAILGQNRDFAF*WLRVGTWHCPHRLK
Trigger: TTTCAGCCTGTGAGGACAATGCCATGTCCCCACCCTAAGCCAGCAAAATGCGAAATCTCTGTTCTGGCCCAGAATGGCACAAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp GTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTaGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGT +
Preference number: 1 (lower is better)
Translates to: VCLSQGRADTLRFHP*RVTKRKQPLLYFHC
Trigger: ACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CCA 90 bp AAGCAAGGAGCAGAGACGGTTTGGGAAGTTGTGGAAGCTCCTTTGTaGGGCTGTCACTTTGGGCTCACAGGTAGCGTGGACAAGGAGAAT +
Preference number: 1 (lower is better)
Translates to: KQGAETVWEVVEAPL*GCHFGLTGSVDKEN
Trigger: ATTCTCCTTGTCCACGCTACCTGTGAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCTCTGCTCCTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 90 bp GCTGAGAAGCAGTTGGTTCCTGGCATGAAGAGGATGGTTGTAGGCTaGGGTCTGAAGGGAGAAGTCAGGTTACAGAGAAGCGTTTGCTGC +
Preference number: 1 (lower is better)
Translates to: AEKQLVPGMKRMVVG*GLKGEVRLQRSVCC
Trigger: GCAGCAAACGCTTCTCTGTAACCTGACTTCTCCCTTCAGACCTCAGCCTACAACCATCCTCTTCATGCCAGGAACCAACTGCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp CTCCCTTGTGCCATTCTGGGCCAGAACAGAGATTTCGCATTTTGCTaGCTTAGGGTGGGGACATGGCATTGTCCTCACAGGCTGAAATCA +
Preference number: 1 (lower is better)
Translates to: LPCAILGQNRDFAFC*LRVGTWHCPHRLKS
Trigger: TGATTTCAGCCTGTGAGGACAATGCCATGTCCCCACCCTAAGCCAGCAAAATGCGAAATCTCTGTTCTGGCCCAGAATGGCACAAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 90 bp TCTGATACCTTTACTAGGACCTCAAGTTGCACTTCTGGGATTGAGTaGCACGTTAACACAGAAGGAAGCCCAGAAGACGCCCGACAGAAC +
Preference number: 1 (lower is better)
Translates to: SDTFTRTSSCTSGIE*HVNTEGSPEDARQN
Trigger: GTTCTGTCGGGCGTCTTCTGGGCTTCCTTCTGTGTTAACGTGTCACTCAATCCCAGAAGTGCAACTTGAGGTCCTAGTAAAGGTATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp CACAGGCTGAAATCATCACATTTGAAAGCTGGAACGAGCATCTTTTaGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGA +
Preference number: 1 (lower is better)
Translates to: HRLKSSHLKAGTSIF*LGITQLLGQFLQNG
Trigger: TCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAAGATGCTCGTTCCAGCTTTCAAATGTGATGATTTCAGCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp TATTCATATAGAACCCAGAAAGCATGTCTCCTTGGACATGCCATGTaGCCTCTCGGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGT +
Preference number: 1 (lower is better)
Translates to: YSYRTQKACLLGHAM*PLGFTRHLETSRAS
Trigger: ACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACCGAGAGGCCACATGGCATGTCCAAGGAGACATGCTTTCTGGGTTCTATATGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 90 bp GGCAGGTCTGTTTCAAATATTAGTAGCATAACACATAAGTGCAATTaGAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCAC +
Preference number: 1 (lower is better)
Translates to: GRSVSNISSITHKCN*SLATSVRSLPCVCH
Trigger: GTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCTACTAATATTTGAAACAGACCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR GCA 90 bp ACGTGCATGCAGCATGACAATAAAGATGGCTCGAAGACATCACAGTaGAAGAACTCTGCAGGCCCTTTCAGCATGAATTATTTTGTGACC +
Preference number: 1 (lower is better)
Translates to: TCMQHDNKDGSKTSQ*KNSAGPFSMNYFVT
Trigger: GGTCACAAAATAATTCATGCTGAAAGGGCCTGCAGAGTTCTTGCACTGTGATGTCTTCGAGCCATCTTTATTGTCATGCTGCATGCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 90 bp CCAACTACTTTTAATGGCTGGATTAATGGACTAACACCTTACATGTaGAAATCCATCTTGGCTCTATTATCAGGACCATGGACAATGGGC +
Preference number: 1 (lower is better)
Translates to: PTTFNGWINGLTPYM*KSILALLSGPWTMG
Trigger: GCCCATTGTCCATGGTCCTGATAATAGAGCCAAGATGGATTTTCACATGTAAGGTGTTAGTCCATTAATCCAGCCATTAAAAGTAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 90 bp ATCAAAAATGGCTACATAGAATGGACCTATTCCATTTTCTATACGTaGATGCAGCATGACAATAAAGATGGCTCGAAGACATCACAGTGC +
Preference number: 1 (lower is better)
Translates to: IKNGYIEWTYSIFYT*MQHDNKDGSKTSQC
Trigger: GCACTGTGATGTCTTCGAGCCATCTTTATTGTCATGCTGCATGCACGTATAGAAAATGGAATAGGTCCATTCTATGTAGCCATTTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp AAATCCATCTTGGCTCTATTATCAGGACCATGGACAATGGGCAGATaGACAGAGGATTTACTGATTTACAAACTATTACCATCTTTGACA +
Preference number: 1 (lower is better)
Translates to: KSILALLSGPWTMGR*TEDLLIYKLLPSLT
Trigger: TGTCAAAGATGGTAATAGTTTGTAAATCAGTAAATCCTCTGTCCATCTGCCCATTGTCCATGGTCCTGATAATAGAGCCAAGATGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 90 bp AAGAAATTATTCTATAAATATCTCCCAGTTCAAAGATTTGACTTTTaGTTGTCTGGGGACCATTCCTCGCTAGGGACATTTCAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: KKLFYKYLPVQRFDF*LSGDHSSLGTFQEK
Trigger: TTTTTCTTGAAATGTCCCTAGCGAGGAATGGTCCCCAGACAACCAAAAGTCAAATCTTTGAACTGGGAGATATTTATAGAATAATTTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGTCCGCTCACTCCTGCTaGCCATGGAGGAGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRSAHSC*PWRSLW
Trigger: CCAGAGGCTCCTCCATGGGCAGCAGGAGTGAGCGGA...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGCCATGGAGGAGCCTCTaGTGTCCCCCGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQPWRSL*CPPAWG
Trigger: GCCCCAGGCCGGGGGACACCAGAGGCTCCTCCATGG...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCATGGAGGAGCCTCTaGTGTCCCCCGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: ASEAFRVSVTRAGRHTPIPWRSL*CPPAWG
Trigger: GCCCCAGGCCGGGGGACACCAGAGGCTCCTCCATGG...AATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGACACTCCTGCTGCCCATaGAGGAGCCTCTGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRHSCCP*RSLWCP
Trigger: GGGACACCAGAGGCTCCTCCATGGGCAGCAGGAGTG...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAACCTCTGCAGCCCCGGTaGCACCTCTCCACAGACGCC +
Preference number: 2 (lower is better)
Translates to: LWGLWHTISQHETSSSGQPLQPR*HLSTDA
Trigger: GGCGTCTGTGGAGAGGTGGCACCGGGGCTGCAGAGG...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp TGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAACCTCTGCAGCCCCGGTaGCACCTCTCCACAGACGCC +
Preference number: 2 (lower is better)
Translates to: CGGCGTQYLNTRPHRAAKPLQPR*HLSTDA
Trigger: GGCGTCTGTGGAGAGGTGGCACCGGGGCTGCAGAGG...TTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp TATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTGAGCTGCCCCTCCGAAGCCAGGAGAGGAGTTaGTGTGTCCCCTGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: YVRGKCRAITSPGELPLRSQERS*CVPCGC
Trigger: GCAGCCACAGGGGACACAGCAACTCCTCTCCTGGCT...TCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCTCTCCACCGTGGCATTaGCTGGGAAAGTCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAASPPWH*LGKSLW
Trigger: CCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGA...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp TCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCAGGGCCAGCCACCCTGTaGCATCCTAAGTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: SEAFRVSVTRAGRHTPIPGPATL*HPKWSL
Trigger: CAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCC...TGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp ACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCACACTCCTGCTGCCCATaGAGGAGCCTCTGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: TVGVVAHNISTRDLIERPHSCCP*RSLWCP
Trigger: GGGACACCAGAGGCTCCTCCATGGGCAGCAGGAGTG...TGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp GCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTATTGGAGGGTGCTGCTaGCTGCGGCGTGTCGGGCTG +
Preference number: 2 (lower is better)
Translates to: AWLQPAKRIWCSECTGLGIGGCC*LRRVGL
Trigger: CAGCCCGACACGCCGCAGCCAGCAGCACCCTCCAAT...ACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR-3UTR CCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAACTGGGAAAGTCGCTGTaGGACACACCCCTCCGCTCA +
Preference number: 2 (lower is better)
Translates to: LWGLWHTISQHETSSSGQLGKSL*DTPLRS
Trigger: TGAGCGGAGGGGTGTGTCCCACAGCGACTTTCCCAG...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACCTGTCATCTCCACCGTaGCATTGGCTGGGAAAGTCG +
Preference number: 2 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHLSSPP*HWLGKS
Trigger: CGACTTTCCCAGCCAATGCCACGGTGGAGATGACAG...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp GCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCTGTCATCTCCACCGTaGCATTGGCTGGGAAAGTCG +
Preference number: 2 (lower is better)
Translates to: ASEAFRVSVTRAGRHTPILSSPP*HWLGKS
Trigger: CGACTTTCCCAGCCAATGCCACGGTGGAGATGACAG...AATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CAA 90 bp TGTAGGCTGAGGTCTGAAGGGAGAAGTCAGGTTACAGAGAAGCGTTaGCTGCAGGGTAGTCAGGTGGGCAGAGACCTGAGACCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: CRLRSEGRSQVTEKR*LQGSQVGRDLRPLG
Trigger: CCCCAAGGGTCTCAGGTCTCTGCCCACCTGACTACCCTGCAGCAAACGCTTCTCTGTAACCTGACTTCTCCCTTCAGACCTCAGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR TCA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTGAGGGCACTGCCCCATaGATTACACATTGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: GPISAERSDRSLCPPGCSEGTAP*ITHCRW
Trigger: CCACCTGCAATGTGTAATTCATGGGGCAGTGCCCTC...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp AATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCTCTGTACCCCAGACCTaGGGCTGTCATCTCCACCGT +
Preference number: 2 (lower is better)
Translates to: NCSLATSVRSLPCVCHKGSVPQT*GCHLHR
Trigger: ACGGTGGAGATGACAGCCCCAGGTCTGGGGTACAGA...GCCCTTGTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGACGGCAGCGTGGCATaGAGATCCACACCTGGTCGG +
Preference number: 2 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGDGSVA*RSTPGR
Trigger: CCGACCAGGTGTGGATCTGCATGCCACGCTGCCGTC...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGTCGAAGACATCACAGTaGAAGAACTCTGCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQSKTSQ*KNSAGP
Trigger: AGGGCCTGCAGAGTTCTTGCACTGTGATGTCTTCGA...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCCTCCGATTCCACCCCTaGAGGGTCACCAAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAALRFHP*RVTKRK
Trigger: CTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAG...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp CTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTCTGAGAGGCCAACGATaGACCAGACAGAGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: LFCRSGLVRWAHTGQHSSLRGQR*TRQRRS
Trigger: GCTTCTTCTCTGTCTGGTCCATCGTTGGCCTCTCAG...ACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR CAA 90 bp AGACGGTTTGGGAAGTTGTGGAAGCTCCTTTGTGGGGCTGTCACTTaGGGCTCACAGGTAGCGTGGACAAGGAGAATCCCTGTGAGTTGG +
Preference number: 2 (lower is better)
Translates to: RRFGKLWKLLCGAVT*GSQVAWTRRIPVSW
Trigger: CCAACTCACAGGGATTCTCCTTGTCCACGCTACCTGTGAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 90 bp AGAAAGCAAGGAGCAGAGACGGTTTGGGAAGTTGTGGAAGCTCCTTaGTGGGGCTGTCACTTTGGGCTCACAGGTAGCGTGGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: RKQGAETVWEVVEAP*WGCHFGLTGSVDKE
Trigger: CTCCTTGTCCACGCTACCTGTGAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCTCTGCTCCTTGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGTTAGTCTCAGTTCGTTaGACTGTCTTCCAACAAAAC +
Preference number: 2 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRLVSVR*TVFQQN
Trigger: GTTTTGTTGGAAGACAGTGCAACGAACTGAGACTAA...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTTATGTTCGTGGGAAATaGAGAGCCATCACCTCGCCA +
Preference number: 2 (lower is better)
Translates to: GPISAERSDRSLCPPGCSYVRGK*RAITSP
Trigger: TGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGATCTGTACCCCAGACCTaGGGCTGTCATCTCCACCGT +
Preference number: 2 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRSVPQT*GCHLHR
Trigger: ACGGTGGAGATGACAGCCCCAGGTCTGGGGTACAGA...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACACCTGACAAACAGAAGTaGGCGCCCCAGGGGGCATCA +
Preference number: 2 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTPDKQK*APQGAS
Trigger: TGATGCCCCCTGGGGCGCCCACTTCTGTTTGTCAGG...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTCTTCCGATCAACTGTTaGACGGCAAACTGCAAACGT +
Preference number: 2 (lower is better)
Translates to: GPISAERSDRSLCPPGCSLPINC*TANCKR
Trigger: ACGTTTGCAGTTTGCCGTGCAACAGTTGATCGGAAG...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACATTTGTGCCGCCTTCCTaGAGCATCCCCACTTCCTGG +
Preference number: 2 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTFVPPS*SIPTSW
Trigger: CCAGGAAGTGGGGATGCTGCAGGAAGGCGGCACAAA...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCACCGTGGCATTGGCTaGGAAAGTCGCTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYHRGIG*ESRCGT
Trigger: TGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTG...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGCACCGTGGCATTGGCTaGGAAAGTCGCTGTGGGACA +
Preference number: 2 (lower is better)
Translates to: SITHKCNCSLATSVRSLPHRGIG*ESRCGT
Trigger: TGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTG...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGTCTCCACCGTGGCATTaGCTGGGAAAGTCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGSPPWH*LGKSLW
Trigger: CCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGA...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp TATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTGAGCTGCCCCTCCGAAGGACGTCATTTTATTaGCTGTCCACGGGAAGTTTC +
Preference number: 2 (lower is better)
Translates to: YVRGKCRAITSPGELPLRRTSFY*LSTGSF
Trigger: GAAACTTCCCGTGGACAGCCAATAAAATGACGTCCT...TCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR TCA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCGGAAGAAAATTCAAATaGAACCAAGCTCTCAGCATC +
Preference number: 2 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPGRKFK*NQALSI
Trigger: GATGCTGAGAGCTTGGTTTCATTTGAATTTTCTTCC...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAACACATAAGTGCAATTaGAGTCTGGCCACAAGCGTC +
Preference number: 2 (lower is better)
Translates to: LWGLWHTISQHETSSSGQTHKCN*SLATSV
Trigger: GACGCTTGTGGCCAGACTGCAATTGCACTTATGTGT...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR TCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAAACAGAAGGTGAAGTaGCACCCGACACGACGGAAC +
Preference number: 2 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLKQKVK*HPTRRN
Trigger: GTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTT...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR GCA 90 bp CGCAGATCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTGGGCCAGCCACCCTGTaGCATCCTAAGTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: RRSKITEDVILLAVHGKFGPATL*HPKWSL
Trigger: CAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCC...AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTAGCATAACACATAAGTaGAATTGCAGTCTGGCCACA +
Preference number: 2 (lower is better)
Translates to: GPISAERSDRSLCPPGCSSITHK*NCSLAT
Trigger: TGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCCTCCGATTCCACCCCTaGAGGGTCACCAAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLLRFHP*RVTKRK
Trigger: CTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAG...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CCA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTTCACATATATGTTCGTaGGAAATGCAGAGCCATCAC +
Preference number: 2 (lower is better)
Translates to: GPISAERSDRSLCPPGCSSHICS*EMQSHH
Trigger: GTGATGGCTCTGCATTTCCCACGAACATATATGTGA...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR TCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACACTCAGCCCAGTAAGCTaGGTGATGACACTGTCCATT +
Preference number: 2 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTLSPVS*VMTLSI
Trigger: AATGGACAGTGTCATCACTCAGCTTACTGGGCTGAG...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR TCA 90 bp ATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTTGGTAAAGATATTGTCTGGTTGGAGCTaGTCAAGTAGGTGTGGAATC +
Preference number: 2 (lower is better)
Translates to: IRLGEMGPHRATQQLVKILSGWS*SSRCGI
Trigger: GATTCCACACCTACTTGATCAGCTCCAACCAGACAA...TATCTTTACCAACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR-3UTR TCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAGGAAGAAAATTCAAATaGAACCAAGCTCTCAGCATC +
Preference number: 2 (lower is better)
Translates to: LWGLWHTISQHETSSSGQGRKFK*NQALSI
Trigger: GATGCTGAGAGCTTGGTTTCATTTGAATTTTCTTCC...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CAA 90 bp CATTTTCTGATACCTTTACTAGGACCTCAAGTTGCACTTCTGGGATaGAGTGACACGTTAACACAGAAGGAAGCCCAGAAGACGCCCGAC +
Preference number: 2 (lower is better)
Translates to: HFLIPLLGPQVALLG*SDTLTQKEAQKTPD
Trigger: GTCGGGCGTCTTCTGGGCTTCCTTCTGTGTTAACGTGTCACTCAATCCCAGAAGTGCAACTTGAGGTCCTAGTAAAGGTATCAGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 90 bp AGGCTGAAATCATCACATTTGAAAGCTGGAACGAGCATCTTTTGGTaGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTG +
Preference number: 2 (lower is better)
Translates to: RLKSSHLKAGTSIFW*GITQLLGQFLQNGV
Trigger: CACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAAGATGCTCGTTCCAGCTTTCAAATGTGATGATTTCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 90 bp CGATGCCATCAGAAGCCCCTGTGTCAAGGACACCTACTGCCAATTTaGGCAAGTTCATTTTTCTTGCTGTTGAGTCAGACAAGAAGGCCT +
Preference number: 2 (lower is better)
Translates to: RCHQKPLCQGHLLPI*ASSFFLLLSQTRRP
Trigger: AGGCCTTCTTGTCTGACTCAACAGCAAGAAAAATGAACTTGCCAAAATTGGCAGTAGGTGTCCTTGACACAGGGGCTTCTGATGGCATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 90 bp GTCTCCTTGGACATGCCATGTGGCCTCTCGGTTTCACCAGGCATCTaGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCATACCTTT +
Preference number: 2 (lower is better)
Translates to: VSLDMPCGLSVSPGI*KHRGQVRELFIHTF
Trigger: AAAGGTATGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACCGAGAGGCCACATGGCATGTCCAAGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTTTTTCTATACGTGCATaGAGCATGACAATAAAGATG +
Preference number: 2 (lower is better)
Translates to: GPISAERSDRSLCPPGCSFSIRA*SMTIKM
Trigger: CATCTTTATTGTCATGCTGCATGCACGTATAGAAAA...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCACTGTGCCATCCTAAGTaGTCTCTGTACCCCAGACCT +
Preference number: 2 (lower is better)
Translates to: GFTRHLETSRASKRVVHSLCHPK*SLYPRP
Trigger: AGGTCTGGGGTACAGAGACCACTTAGGATGGCACAG...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCAGGTTTGCTCCTCACTTaGAACCACAGCTGGCAATCC +
Preference number: 2 (lower is better)
Translates to: GFTRHLETSRASKRVVHSGLLLT*NHSWQS
Trigger: GGATTGCCAGCTGTGGTTCCAAGTGAGGAGCAAACC...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGATTAGTCTCAGTTCGTTaGACTGTCTTCCAACAAAAC +
Preference number: 2 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRLVSVR*TVFQQN
Trigger: GTTTTGTTGGAAGACAGTGCAACGAACTGAGACTAA...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CAA 90 bp GCTAAAACCATCTCTATTCATATAGAACCCAGAAAGCATGTCTCCTaGGACATGCCATGTGGCCTCTCGGTTTCACCAGGCATCTTGAAA +
Preference number: 2 (lower is better)
Translates to: AKTISIHIEPRKHVS*DMPCGLSVSPGILK
Trigger: TTTCAAGATGCCTGGTGAAACCGAGAGGCCACATGGCATGTCCAAGGAGACATGCTTTCTGGGTTCTATATGAATAGAGATGGTTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CCA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCATGTGAAAATCCATCTTaGCTCTATTATCAGGACCAT +
Preference number: 2 (lower is better)
Translates to: GFTRHLETSRASKRVVHSCENPS*LYYQDH
Trigger: ATGGTCCTGATAATAGAGCCAAGATGGATTTTCACA...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR GCA 90 bp AATCACTTGGGTTACTTGTATCATTGGTCAATGTGTCTTGTCTTTCATATGGTTACACATAAGTGCAATTaGAGTCTGGCCACAAGCGTC +
Preference number: 2 (lower is better)
Translates to: NHLGYLYHWSMCLVFHMVTHKCN*SLATSV
Trigger: GACGCTTGTGGCCAGACTGCAATTGCACTTATGTGT...AACCATATGAAAGACAAGACACATTGACCAATGATACAAGTAACCCAAGTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 90 bp ATAGCCTTTTTCCATAAATGCAAATCACTTGGGTTACTTGTATCATaGGTCAATGTGTCTTGTCTTTCATATGGTTATAAGGAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: IAFFHKCKSLGLLVS*VNVSCLSYGYKEQG
Trigger: GCCTTGCTCCTTATAACCATATGAAAGACAAGACACATTGACCAATGATACAAGTAACCCAAGTGATTTGCATTTATGGAAAAAGGCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 90 bp ACTCCCACAGCTCATGTGTACTTGATAGAAAATGTAAACATCAATTaGATTTCGGCTCAGCTTCAAAACAGTAGTAAGGCATCAATTAGA +
Preference number: 2 (lower is better)
Translates to: TPTAHVYLIENVNIN*ISAQLQNSSKASIR
Trigger: TCTAATTGATGCCTTACTACTGTTTTGAAGCTGAGCCGAAATCAAATTGATGTTTACATTTTCTATCAAGTACACATGAGCTGTGGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp GGCCAGGCTTCCCGGGCAGGTGCAGCTCGTCGCTGGTaGGGCTGGGCTCGCTCTGCAGCAGGGGCGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GQASRAGAARRW*GWARSAAGAWL
Trigger: CAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCTGCCCGGGAAGCCTGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR GCA 72 bp CTGCGTGGCCCCGTACATGGTGATGCCATTGGAGGGTaGTGCTGGCTGCGGCGTGTCGGGCTGGATGTACCC +
Preference number: 3 (lower is better)
Translates to: LRGPVHGDAIGG*CWLRRVGLDVP
Trigger: GGGTACATCCAGCCCGACACGCCGCAGCCAGCAGCACCCTCCAATGGCATCACCATGTACGGGGCCACGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR TCA 72 bp AGCGTTTGCTGCAGGGTAGTCAGGTGGGCAGAGACCTaGGACCCTTGGGGAGTAGCCCGCCAGGCTGTGCCC +
Preference number: 3 (lower is better)
Translates to: SVCCRVVRWAET*DPWGVARQAVP
Trigger: GGGCACAGCCTGGCGGGCTACTCCCCAAGGGTCTCAGGTCTCTGCCCACCTGACTACCCTGCAGCAAACGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp AGGTGCAGCTCGTCGCTGGTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCAGCCTGCAAAACGAAT +
Preference number: 3 (lower is better)
Translates to: RCSSSLVRLGSL*SRGVAAACKTN
Trigger: ATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR CCA 72 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTaGGAAAGTCGCTGTGGGACACACCCCTCCGCTCAC +
Preference number: 3 (lower is better)
Translates to: QTWGCHLHRGIG*ESRCGTHPSAH
Trigger: GTGAGCGGAGGGGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CCA 72 bp GGCCCCGTACATGGTGATGCCATTGGAGGGTGCTGCTaGCTGCGGCGTGTCGGGCTGGATGTACCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: GPVHGDAIGGCC*LRRVGLDVPSS
Trigger: AGAAGAGGGTACATCCAGCCCGACACGCCGCAGCCAGCAGCACCCTCCAATGGCATCACCATGTACGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR-3UTR CAA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGTGTGAGCGTGTGCGGTaGTGTAAGGAGGGCACTGCC +
Preference number: 3 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRCERVR*CKEGTA
Trigger: GGCAGTGCCCTCCTTACACAACCGCACACGCTCACA...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGATCTCCACCGTGGCATaGGCTGGGAAAGTCGCTGTG +
Preference number: 3 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRISTVA*AGKVAV
Trigger: CACAGCGACTTTCCCAGCCAATGCCACGGTGGAGAT...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp ACGAGACCTCATCGAGCGGCCAAACAGAAGGTGAAGTaGCACCCGACACGACGGAACCCCAGCCGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: TRPHRAAKQKVK*HPTRRNPSRPL
Trigger: CAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGAGGTCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR TCA 72 bp TCAACACGAGACCTCATCGAGCGGCCAAACAGAAGGTaGAGTGACACCCGACACGACGGAACCCCAGCCGCC +
Preference number: 3 (lower is better)
Translates to: STRDLIERPNRR*SDTRHDGTPAA
Trigger: GGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGAGGTCTCGTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR GCA 72 bp AAACCAAGCTCTCAGCATCCGGGGCCAGCCACCCTGTaGCATCCTAAGTGGTCTCTGTACCCCAGACCTGGG +
Preference number: 3 (lower is better)
Translates to: KPSSQHPGPATL*HPKWSLYPRPG
Trigger: CCCAGGTCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTGAGAGCTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CCA 72 bp CACGCTCAGTTCAGCCTTCAAGTGCCGGGAAGCCTGTaGTTCCCTGGAGCACTCCTGGGAGAACGAACGCAG +
Preference number: 3 (lower is better)
Translates to: HAQFSLQVPGSL*FPGALLGERTQ
Trigger: CTGCGTTCGTTCTCCCAGGAGTGCTCCAGGGAACCACAGGCTTCCCGGCACTTGAAGGCTGAACTGAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAATCTCCACCGTGGCATaGGCTGGGAAAGTCGCTGTG +
Preference number: 3 (lower is better)
Translates to: SQGRADTLRFHPWRVTKRISTVA*AGKVAV
Trigger: CACAGCGACTTTCCCAGCCAATGCCACGGTGGAGAT...TCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR TCA 72 bp GGGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTaGCCAGTTCTGGTTCCAGCATTTTCTGGGCGATGC +
Preference number: 3 (lower is better)
Translates to: GSSPPGCALQSL*PVLVPAFSGRC
Trigger: GCATCGCCCAGAAAATGCTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp ATGCACTGGTCTTGGTCGCACATGTCACTCTGTGACTaGGTGGCCCCGTACATGGTGATGCCATTGGAGGGT +
Preference number: 3 (lower is better)
Translates to: MHWSWSHMSLCD*VAPYMVMPLEG
Trigger: ACCCTCCAATGGCATCACCATGTACGGGGCCACGCAGTCACAGAGTGACATGTGCGACCAAGACCAGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR GCA 72 bp GCAGGGGCGTGGCTGCAGCCTGCAAAACGAATTTGGTaGTCTGAATGCACTGGTCTTGGTCGCACATGTCAC +
Preference number: 3 (lower is better)
Translates to: AGAWLQPAKRIW*SECTGLGRTCH
Trigger: GTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR CCA 72 bp GCAGAGACGGTTTGGGAAGTTGTGGAAGCTCCTTTGTaGGGCTGTCACTTTGGGCTCACAGGTAGCGTGGAC +
Preference number: 3 (lower is better)
Translates to: AETVWEVVEAPL*GCHFGLTGSVD
Trigger: GTCCACGCTACCTGTGAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp GCAGCAGGGGCGTGGCTGCAGCCTGCAAAACGAATTTaGTGCTCTGAATGCACTGGTCTTGGTCGCACATGT +
Preference number: 3 (lower is better)
Translates to: AAGAWLQPAKRI*CSECTGLGRTC
Trigger: ACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR CCA 72 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTaGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTAT +
Preference number: 3 (lower is better)
Translates to: SQGRADTLRFHP*RVTKRKQPLLY
Trigger: ATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CCA 72 bp CGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTaGTTCCAGCATTTTCTGGGCGATGCCATCAGAAGC +
Preference number: 3 (lower is better)
Translates to: RQAVPFKVSDQF*FQHFLGDAIRS
Trigger: GCTTCTGATGGCATCGCCCAGAAAATGCTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTACTTCCGATCAACTGTaGCACGGCAAACTGCAAACG +
Preference number: 3 (lower is better)
Translates to: GPISAERSDRSLCPPGCSTSDQL*HGKLQT
Trigger: CGTTTGCAGTTTGCCGTGCAACAGTTGATCGGAAGT...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp CGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCTTCTGTCGATCAGGCTaGGTGAGATGGGCCCACACA +
Preference number: 3 (lower is better)
Translates to: RGCSLQNEFGALNALVLVFCRSG*VRWAHT
Trigger: TGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAA...GACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR TCA 72 bp GTGCCACCTCTCCACAGACGCCTCAGCCCAGTAAGCTaGGTGATGACACTGTCCATTAGTCTCAGTTCGTTG +
Preference number: 3 (lower is better)
Translates to: VPPLHRRLSPVS*VMTLSISLSSL
Trigger: CAACGAACTGAGACTAATGGACAGTGTCATCACTCAGCTTACTGGGCTGAGGCGTCTGTGGAGAGGTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR TCA 72 bp GGCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTaGATGCACTGGTCTTGGTCGCACATGTCACTCTGT +
Preference number: 3 (lower is better)
Translates to: GVAAACKTNLVL*MHWSWSHMSLC
Trigger: ACAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR GCA 72 bp GGGGTGGCGTGGAACTCTGCAAAGACTCCTCCCTTGTaGCATTCTGGGCCAGAACAGAGATTTCGCATTTTG +
Preference number: 3 (lower is better)
Translates to: GVAWNSAKTPPL*HSGPEQRFRIL
Trigger: CAAAATGCGAAATCTCTGTTCTGGCCCAGAATGGCACAAGGGAGGAGTCTTTGCAGAGTTCCACGCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp GCCATTCTGGGCCAGAACAGAGATTTCGCATTTTGCTaGCTTAGGGTGGGGACATGGCATTGTCCTCACAGG +
Preference number: 3 (lower is better)
Translates to: AILGQNRDFAFC*LRVGTWHCPHR
Trigger: CCTGTGAGGACAATGCCATGTCCCCACCCTAAGCCAGCAAAATGCGAAATCTCTGTTCTGGCCCAGAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp ACAGAAGGCCTGGCCCATCAGGTCTCCGCAGGAACATaGCTCATAAAATGGGTTTGCTCCTCACTTGGAACC +
Preference number: 3 (lower is better)
Translates to: TEGLAHQVSAGT*LIKWVCSSLGT
Trigger: GGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGACCTGATGGGCCAGGCCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTCTCTATTTCCATTGTaGTCAAAGCACTCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPSLFPL*SKHSGW
Trigger: CCAACCTGAGTGCTTTGACAACAATGGAAATAGAGA...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CAA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTAGCAAGGCCATGGCTTaGAACTTGAGTAGCTTTAGC +
Preference number: 3 (lower is better)
Translates to: GPISAERSDRSLCPPGCSSKAMA*NLSSFS
Trigger: GCTAAAGCTACTCAAGTTCAAAGCCATGGCCTTGCT...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp GAGCGTGTGCGGTTGTGTAAGGAGGGCACTGCCCCATaGATTACACATTGCAGGTGGGTACAAGTAGTTAGG +
Preference number: 3 (lower is better)
Translates to: ERVRLCKEGTAP*ITHCRWVQVVR
Trigger: CCTAACTACTTGTACCCACCTGCAATGTGTAATTCATGGGGCAGTGCCCTCCTTACACAACCGCACACGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp TGTGCCATTCTGGGCCAGAACAGAGATTTCGCATTTTaGTGGCTTAGGGTGGGGACATGGCATTGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: CAILGQNRDFAF*WLRVGTWHCPH
Trigger: GTGAGGACAATGCCATGTCCCCACCCTAAGCCAGCAAAATGCGAAATCTCTGTTCTGGCCCAGAATGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp GAAGAAAGCAAGGAGCAGAGACGGTTTGGGAAGTTGTaGAAGCTCCTTTGTGGGGCTGTCACTTTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: EESKEQRRFGKL*KLLCGAVTLGS
Trigger: TGAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCTCTGCTCCTTGCTTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp GCCCATCAGGTCTCCGCAGGAACATGGCTCATAAAATaGGTTTGCTCCTCACTTGGAACCACAGCTGGCAAT +
Preference number: 3 (lower is better)
Translates to: AHQVSAGTWLIK*VCSSLGTTAGN
Trigger: ATTGCCAGCTGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGACCTGATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACAGCAAAGACTCCTCCCTaGTGCCATTCTGGGCCAGAA +
Preference number: 3 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTAKTPP*CHSGPE
Trigger: TTCTGGCCCAGAATGGCACAAGGGAGGAGTCTTTGC...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp CAGTTGGTTCCTGGCATGAAGAGGATGGTTGTAGGCTaGGGTCTGAAGGGAGAAGTCAGGTTACAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: QLVPGMKRMVVG*GLKGEVRLQRS
Trigger: GCTTCTCTGTAACCTGACTTCTCCCTTCAGACCTCAGCCTACAACCATCCTCTTCATGCCAGGAACCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp ATCCCTTCTGGTGAACTTAAGACCCTAAGCCGAGGCTaGGAAGCAGTTGGTTCCTGGCATGAAGAGGATGGT +
Preference number: 3 (lower is better)
Translates to: IPSGELKTLSRG*EAVGSWHEEDG
Trigger: ACCATCCTCTTCATGCCAGGAACCAACTGCTTCTCAGCCTCGGCTTAGGGTCTTAAGTTCACCAGAAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp CAGGTCTCCGCAGGAACATGGCTCATAAAATGGGTTTaGTCCTCACTTGGAACCACAGCTGGCAATCCTAGA +
Preference number: 3 (lower is better)
Translates to: QVSAGTWLIKWV*SSLGTTAGNPR
Trigger: TCTAGGATTGCCAGCTGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp TGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATaGACTGGTCTTGGTCGCACATGTCACTCTGTGACT +
Preference number: 3 (lower is better)
Translates to: WLQPAKRIWCSE*TGLGRTCHSVT
Trigger: AGTCACAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
3UTR CCA 72 bp AGAACCCAGAAAGCATGTCTCCTTGGACATGCCATGTaGCCTCTCGGTTTCACCAGGCATCTTGAAACATCG +
Preference number: 3 (lower is better)
Translates to: RTQKACLLGHAM*PLGFTRHLETS
Trigger: CGATGTTTCAAGATGCCTGGTGAAACCGAGAGGCCACATGGCATGTCCAAGGAGACATGCTTTCTGGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAATCTCTATTTCCATTGTaGTCAAAGCACTCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: LWGLWHTISQHETSSSGQSLFPL*SKHSGW
Trigger: CCAACCTGAGTGCTTTGACAACAATGGAAATAGAGA...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR-3UTR CAA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACACTGAAGACCATGATCTaGCTTTCCAGGGGAATGAGC +
Preference number: 3 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTLKTMI*LSRGMS
Trigger: GCTCATTCCCCTGGAAAGCAAGATCATGGTCTTCAG...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp GTGGAACTCTGCAAAGACTCCTCCCTTGTGCCATTCTaGGCCAGAACAGAGATTTCGCATTTTGCTGGCTTA +
Preference number: 3 (lower is better)
Translates to: VELCKDSSLVPF*ARTEISHFAGL
Trigger: TAAGCCAGCAAAATGCGAAATCTCTGTTCTGGCCCAGAATGGCACAAGGGAGGAGTCTTTGCAGAGTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATGAAAGCAGCACTTCCTaGGAAATAGCAACACCACTG +
Preference number: 3 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYESSTS*EIATPL
Trigger: CAGTGGTGTTGCTATTTCCAAGGAAGTGCTGCTTTC...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR TCA 72 bp TTTACTAGGACCTCAAGTTGCACTTCTGGGATTGAGTaGCACGTTAACACAGAAGGAAGCCCAGAAGACGCC +
Preference number: 3 (lower is better)
Translates to: FTRTSSCTSGIE*HVNTEGSPEDA
Trigger: GGCGTCTTCTGGGCTTCCTTCTGTGTTAACGTGTCACTCAATCCCAGAAGTGCAACTTGAGGTCCTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp CTCTCCCTACTTCCGATCAACTGTTGCACGGCAAACTaGAAACGTAGAGCAAATTCCACTAAGATGGTGTCA +
Preference number: 3 (lower is better)
Translates to: LSLLPINCCTAN*KRRANSTKMVS
Trigger: TGACACCATCTTAGTGGAATTTGCTCTACGTTTGCAGTTTGCCGTGCAACAGTTGATCGGAAGTAGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR-3UTR CAA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACAATTAGTCTCAGTTCGTaGCACTGTCTTCCAACAAAA +
Preference number: 3 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTISLSS*HCLPTK
Trigger: TTTTGTTGGAAGACAGTGCAACGAACTGAGACTAAT...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp CAGCATGACAATAAAGATGGCTCGAAGACATCACAGTaGAAGAACTCTGCAGGCCCTTTCAGCATGAATTAT +
Preference number: 3 (lower is better)
Translates to: QHDNKDGSKTSQ*KNSAGPFSMNY
Trigger: ATAATTCATGCTGAAAGGGCCTGCAGAGTTCTTGCACTGTGATGTCTTCGAGCCATCTTTATTGTCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp AAATCATCACATTTGAAAGCTGGAACGAGCATCTTTTaGTTGGGCATAACGCAACTGCTGGGCCAATTTCTG +
Preference number: 3 (lower is better)
Translates to: KSSHLKAGTSIF*LGITQLLGQFL
Trigger: CAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAAGATGCTCGTTCCAGCTTTCAAATGTGATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp CCTGGTCAAGAACTAAATGAACTCAATGTATTCTTGTaGATGGATGAAGGGCAGCTCCTTCTGGGAAGATTC +
Preference number: 3 (lower is better)
Translates to: PGQELNELNVFL*MDEGQLLLGRF
Trigger: GAATCTTCCCAGAAGGAGCTGCCCTTCATCCATCCACAAGAATACATTGAGTTCATTTAGTTCTTGACCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp GGCTACATAGAATGGACCTATTCCATTTTCTATACGTaGATGCAGCATGACAATAAAGATGGCTCGAAGACA +
Preference number: 3 (lower is better)
Translates to: GYIEWTYSIFYT*MQHDNKDGSKT
Trigger: TGTCTTCGAGCCATCTTTATTGTCATGCTGCATGCACGTATAGAAAATGGAATAGGTCCATTCTATGTAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp TTGGCTCTATTATCAGGACCATGGACAATGGGCAGATaGACAGAGGATTTACTGATTTACAAACTATTACCA +
Preference number: 3 (lower is better)
Translates to: LALLSGPWTMGR*TEDLLIYKLLP
Trigger: TGGTAATAGTTTGTAAATCAGTAAATCCTCTGTCCATCTGCCCATTGTCCATGGTCCTGATAATAGAGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp TGCAGGCCCTTTCAGCATGAATTATTTTGTGACCTGTaGATTGCCTTCATTCCAAATAAAACTTGTGTGCTT +
Preference number: 3 (lower is better)
Translates to: CRPFQHELFCDL*IAFIPNKTCVL
Trigger: AAGCACACAAGTTTTATTTGGAATGAAGGCAATTCACAGGTCACAAAATAATTCATGCTGAAAGGGCCTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp TTTAATGGCTGGATTAATGGACTAACACCTTACATGTaGAAATCCATCTTGGCTCTATTATCAGGACCATGG +
Preference number: 3 (lower is better)
Translates to: FNGWINGLTPYM*KSILALLSGPW
Trigger: CCATGGTCCTGATAATAGAGCCAAGATGGATTTTCACATGTAAGGTGTTAGTCCATTAATCCAGCCATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR TCA 72 bp AAAGTGAACAAAGTGGTCATTTTCTTAATTTCATTCTaGTCAGTGTCTAGGAAGGATGATGACCTACATGAT +
Preference number: 3 (lower is better)
Translates to: KVNKVVIFLISF*SVSRKDDDLHD
Trigger: ATCATGTAGGTCATCATCCTTCCTAGACACTGATCAGAATGAAATTAAGAAAATGACCACTTTGTTCACTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR GCA 72 bp AACTCTTTCTCAGGAGTAATAGCCTTTTTCCATAAATaGAAATCACTTGGGTTACTTGTATCATTGGTCAAT +
Preference number: 3 (lower is better)
Translates to: NSFSGVIAFFHK*KSLGLLVSLVN
Trigger: ATTGACCAATGATACAAGTAACCCAAGTGATTTGCATTTATGGAAAAAGGCTATTACTCCTGAGAAAGAGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CCA 72 bp TCCATAAATGCAAATCACTTGGGTTACTTGTATCATTaGTCAATGTGTCTTGTCTTTCATATGGTTATAAGG +
Preference number: 3 (lower is better)
Translates to: SINANHLGYLYH*SMCLVFHMVIR
Trigger: CCTTATAACCATATGAAAGACAAGACACATTGACCAATGATACAAGTAACCCAAGTGATTTGCATTTATGGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGCGGCGAGGTTGGGCATaGAGGCGGGCGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRRRGWA*RRAVWA
Trigger: CGCCCACACCGCCCGCCTCCATGCCCAACCTCGCCG...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCCGGCGAGGTTGGGCATaGAGGCGGGCGGTGTGGGCG +
Preference number: 4 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPRRGWA*RRAVWA
Trigger: CGCCCACACCGCCCGCCTCCATGCCCAACCTCGCCG...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATGGCTTCCCGGGCAGGTaGAGCTCGTCGCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ELRMDWATRGTGVRAKPDGFPGR*SSSLVR
Trigger: CCTCACCAGCGACGAGCTGCACCTGCCCGGGAAGCC...ATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGACCTCTGCAGCCCCGGTaGCACCTCTCCACAGACGCC +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRPLQPR*HLSTDA
Trigger: GGCGTCTGTGGAGAGGTGGCACCGGGGCTGCAGAGG...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGCCTCGGCGAGGTTaGGCATGGAGGCGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPWPRRG*AWRRAV
Trigger: CACCGCCCGCCTCCATGCCCAACCTCGCCGAGGCCA...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGATCACGTCCGCGAGCGTaGCCTCGGCGAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRSRPRA*PRRGWA
Trigger: TGCCCAACCTCGCCGAGGCCACGCTCGCGGACGTGA...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGGCGGCGCGGCCAGGTTaGGTCCACTCCTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKAARPG*VHSFLR
Trigger: CCGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGC...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTGAGCTGCCCCTCCGAAGAATCCCCGCTCCGTaGGGGGACGGCGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: YVRGKCRAITSPGELPLRRIPAP*GDGAGP
Trigger: CGGACCAGCGCCGTCCCCTCACGGAGCGGGGATTCT...TCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGAGGTGGGCAGAGACCTaGGACCCTTGGGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRRWAET*DPWGVA
Trigger: GGCTACTCCCCAAGGGTCTCAGGTCTCTGCCCACCT...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCACGAGGGCAGCCGGCTaGGGGCGCACACCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAATRAAG*GRTPPG
Trigger: TCCTGGGGGTGTGCGCCCCCAGCCGGCTGCCCTCGT...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGAATCAGGCGTGGCTCGTaGGAGGACTCCGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRIRRGS*EDSGVA
Trigger: AGCGACCCCGGAGTCCTCCCACGAGCCACGCCTGAT...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCATCCCCCTGCTTCCTaGGGCCCTCCCGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: EAFRVSVTRAGRHTPIPPHPPAS*GPPGCR
Trigger: CCTGCATCCGGGAGGGCCCCAGGAAGCAGGGGGATG...GGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAGCCATTGGAGGGTGCTaGTGGCTGCGGCGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: SQGRADTLRFHPWRVTKRAIGGC*WLRRVG
Trigger: CCCGACACGCCGCAGCCAGCAGCACCCTCCAATGGC...TCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCGGGCCAGCCACCCTGTaGCATCCTAAGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAAGPATL*HPKWSL
Trigger: CAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCC...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGGACGGCAGCGTGGCATaGAGATCCACACCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGDGSVA*RSTPGR
Trigger: CCGACCAGGTGTGGATCTGCATGCCACGCTGCCGTC...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTGAGCTGCCCCTCCGACTCGGGAGCCACTTCTaGGGCGCGGCCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: YVRGKCRAITSPGELPLRLGSHF*GAARLG
Trigger: ACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAG...TCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACCTCGGGAGCCACTTCTaGGGCGCGGCCAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHLGSHF*GAARLG
Trigger: ACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAG...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCTGTGGGGCGACTCCATaGGGGAGGAGCTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAACGATP*GRSCGC
Trigger: GCACCCACAGCTCCTCCCCCATGGAGTCGCCCCACA...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCATCAGGCGTGGCTCGTaGGAGGACTCCGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: EAFRVSVTRAGRHTPIPPIRRGS*EDSGVA
Trigger: AGCGACCCCGGAGTCCTCCCACGAGCCACGCCTGAT...GGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGCGGCTTCATCAGGCGTaGCTCGTGGGAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKRLHQA*LVGGLR
Trigger: CCGGAGTCCTCCCACGAGCCACGCCTGATGAAGCCG...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGCATCCGCCTGCTTCCTaGGGACCAGGGCACTCACGC +
Preference number: 4 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKHPPAS*GPGHSR
Trigger: GCGTGAGTGCCCTGGTCCCCAGGAAGCAGGCGGATG...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GCTTTCCAGGGGAATGAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGGTCGATCAGGCTTGGTaGGATGGGCCCACACAGGGC +
Preference number: 4 (lower is better)
Translates to: AFQGNELRMDWATRGTGVVDQAW*DGPTQG
Trigger: GCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGAC...CACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTCATTCCCCTGGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCTCCGACCATCCCTCCTaGCAAACAGAAGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GAVISTVALAGKVAVGHTSDHPS*QTEVGA
Trigger: GGCGCCCACTTCTGTTTGTCAGGAGGGATGGTCGGA...GGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCGATGCCATTGGAGGGTaGTGCTGGCTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAADAIGG*CWLRRV
Trigger: GACACGCCGCAGCCAGCAGCACCCTCCAATGGCATC...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTGGCTTCCCGGGCAGGTaGAGCTCGTCGCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LFCRSGLVRWAHTGQHSSGFPGR*SSSLVR
Trigger: CCTCACCAGCGACGAGCTGCACCTGCCCGGGAAGCC...ACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGACTGGGAAAGTCGCTGTaGGACACACCCCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRLGKSL*DTPLRS
Trigger: TGAGCGGAGGGGTGTGTCCCACAGCGACTTTCCCAG...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCTCTCCACCGTGGCATTaGCTGGGAAAGTCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAASPPWH*LGKSLW
Trigger: CCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGA...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp AATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGCGGCGCGGCCAGGTTaGGTCCACTCCTTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NCSLATSVRSLPCVCHKGAARPG*VHSFLR
Trigger: CCGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGC...GCCCTTGTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGCTGGATGTACCCTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACAGGATCAGGCGTGGCTCGTaGGAGGACTCCGGGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GWMYPLLSIRLGEMGPHRIRRGS*EDSGVA
Trigger: AGCGACCCCGGAGTCCTCCCACGAGCCACGCCTGAT...CCTGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAGGGTACATCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCGGCTTCATCAGGCGTaGCTCGTGGGAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQRLHQA*LVGGLR
Trigger: CCGGAGTCCTCCCACGAGCCACGCCTGATGAAGCCG...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCCTCCGTCTGCAGCAGGGGCGTaGCTGCAGCCATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: VISTVALAGKVAVGHTPPSAAGA*LQPCHS
Trigger: AGAGTGACATGGCTGCAGCCACGCCCCTGCTGCAGA...CGGAGGGGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414563.6
3UTR CAA 72 bp CTGCAGGGTAGTCAGGTGGGCAGAGACCTGAGACCCTaGGGGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LQGSQVGRDLRP*GSSPPGCALQS
Trigger: ACTTTGAAGGGCACAGCCTGGCGGGCTACTCCCCAAGGGTCTCAGGTCTCTGCCCACCTGACTACCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAGTCGATCAGGCTTGGTaGGATGGGCCCACACAGGGC +
Preference number: 4 (lower is better)
Translates to: SQGRADTLRFHPWRVTKRVDQAW*DGPTQG
Trigger: GCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGAC...TCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TCGGGCTGGATGTACCCTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACGTCGATCAGGCTTGGTaGGATGGGCCCACACAGGGC +
Preference number: 4 (lower is better)
Translates to: SGWMYPLLSIRLGEMGPHVDQAW*DGPTQG
Trigger: GCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGAC...GTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAGGGTACATCCAGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGGGCGGGCCCAGTGTaGGGCTGGCGCAGGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SITHKCNCSLATSVRSLPWAGPV*GWRRAC
Trigger: GCACGCCCTGCGCCAGCCTCACACTGGGCCCGCCCA...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCTGGGTCACACGGAGCTaGGCTTCACCAGGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAAWVTRS*ASPGRA
Trigger: TGCGCGGCCTGGTGAAGCTCAGCTCCGTGTGACCCA...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCATCACACACGGAGGTaGAGACTGTGGGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: GAVISTVALAGKVAVGHTHHTRR*RLWGLW
Trigger: CCACAACCCCCACAGTCTTCACCTCCGTGTGTGATG...GGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTGGACTCCGGGGTCGCTaGAGCTGGTGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AWLQPAKRIWCSECTGLGGLRGR*SWCGAG
Trigger: CCCTGCTCCGCACCAGCTTCAGCGACCCCGGAGTCC...ACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGTGCTTTCCAGGGGAATaGGCTGAGAATGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRCFPGE*AENGLG
Trigger: GCCCAGTCCATTCTCAGCTCATTCCCCTGGAAAGCA...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGAGCCATGTCACTCTGTaGCTGCGTGGCCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGSHVTL*LRGPVH
Trigger: ATGTACGGGGCCACGCAGTCACAGAGTGACATGGCT...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS-3UTR GCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGAGTTATCACAAAGGCTaGAATGGGAGGCGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRSYHKG*NGRREG
Trigger: CCCCTCGCGCCTCCCATTGCAGCCTTTGTGATAACT...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCATGTCACTCTGTGACTaGGTGGCCCCGTACATGGTG +
Preference number: 4 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAAMSLCD*VAPYMV
Trigger: CACCATGTACGGGGCCACGCAGTCACAGAGTGACAT...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGATGTGCGCCAGGGGGCTaGCCGCCGCCAGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRCAPGG*PPPVAW
Trigger: CCAGGCTACTGGCGGCGGGCAGCCCCCTGGCGCACA...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACTCCGCTCACTCCTGCTaGCCATGGAGGAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHSAHSC*PWRSLW
Trigger: CCAGAGGCTCCTCCATGGGCAGCAGGAGTGAGCGGA...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTTCCGCTCACTCCTGCTaGCCATGGAGGAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASEAFRVSVTRAGRHTPISAHSC*PWRSLW
Trigger: CCAGAGGCTCCTCCATGGGCAGCAGGAGTGAGCGGA...AATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGGACGGCAGCGTGGCATaGAGATCCACACCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQDGSVA*RSTPGR
Trigger: CCGACCAGGTGTGGATCTGCATGCCACGCTGCCGTC...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp AATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCCGGCGAGGGCTCCCTTaGTCCCTCCTACCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: NCSLATSVRSLPCVCHKGRRGLP*SLLPGG
Trigger: TCCTCCGGGTAGGAGGGAGCAAGGGAGCCCTCGCCG...GCCCTTGTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCTGCGGCGTGTCGGGCTaGATGTACCCTCTTCTGTCG +
Preference number: 4 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAACGVSG*MYPLLS
Trigger: CGACAGAAGAGGGTACATCCAGCCCGACACGCCGCA...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGTCGGGCGTCAGGAACTaGTGGCCCATGTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGSGVRN*WPMCSS
Trigger: AGATGAGCACATGGGCCACCAGTTCCTGACGCCCGA...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGATCGGGCGTCAGGAACTaGTGGCCCATGTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRSGVRN*WPMCSS
Trigger: AGATGAGCACATGGGCCACCAGTTCCTGACGCCCGA...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGACACTCCTGCTGCCCATaGAGGAGCCTCTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SQGRADTLRFHPWRVTKRHSCCP*RSLWCP
Trigger: GGGACACCAGAGGCTCCTCCATGGGCAGCAGGAGTG...TCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCTCTGTACCCCAGACCTaGGGCTGTCATCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: GAVISTVALAGKVAVGHTSVPQT*GCHLHR
Trigger: ACGGTGGAGATGACAGCCCCAGGTCTGGGGTACAGA...GGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACAGACGGCAGCGTaGCATGCAGATCCACACCTG +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGTQTAA*HADPHL
Trigger: CAGGTGTGGATCTGCATGCCACGCTGCCGTCTGTGT...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCAACCCCTCCCAGGGGTaGGGACAACCACGCACGTTT +
Preference number: 4 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAANPSQG*GQPRTF
Trigger: AAACGTGCGTGGTTGTCCCCACCCCTGGGAGGGGTT...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAACGAGGGCAGCCGGCTaGGGGCGCACACCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRTRAAG*GRTPPG
Trigger: TCCTGGGGGTGTGCGCCCCCAGCCGGCTGCCCTCGT...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAAGCAGCTCGTCGCTGGTaGGGCTGGGCTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CGGCGTQYLNTRPHRAAKAARRW*GWARSA
Trigger: TGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGC...TTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACCAGGGATGGCAGGGGTaGTTTTCACCGCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHQGWQG*FSPPGT
Trigger: CGTACCTGGCGGTGAAAATCACCCCTGCCATCCCTG...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TCGGGCTGGATGTACCCTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACCAGGGATGGCAGGGGTaGTTTTCACCGCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: SGWMYPLLSIRLGEMGPHQGWQG*FSPPGT
Trigger: CGTACCTGGCGGTGAAAATCACCCCTGCCATCCCTG...GTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAGGGTACATCCAGCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGGACTCCGGGGTCGCTaGAGCTGGTGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRGLRGR*SWCGAG
Trigger: CCCTGCTCCGCACCAGCTTCAGCGACCCCGGAGTCC...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGTGTGCGCCAGGGGGCTaGCCGCCGCCAGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGCAPGG*PPPVAW
Trigger: CCAGGCTACTGGCGGCGGGCAGCCCCCTGGCGCACA...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCCTCCGAGTTCAGCCTTCAAGTaGCGGGAAGCCTGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VISTVALAGKVAVGHTPPSSAFK*REACGS
Trigger: GGAACCACAGGCTTCCCGGCACTTGAAGGCTGAACT...CGGAGGGGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACCTGGGAAAGTCGCTGTaGGACACACCCCTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHLGKSL*DTPLRS
Trigger: TGAGCGGAGGGGTGTGTCCCACAGCGACTTTCCCAG...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAACGGTGTCGCTGCGCCTaGCAGCCTAGTCGAATCCGC +
Preference number: 4 (lower is better)
Translates to: LWGLWHTISQHETSSSGQRCRCA*QPSRIR
Trigger: GCGGATTCGACTAGGCTGCCAGGCGCAGCGACACCG...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGGTGGAAGCTCCTTTGTaGGGCTGTCACTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGVEAPL*GCHFGL
Trigger: GAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCAC...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGGAGCTGAGAATGGACTaGGCCACACGTGGGACCGGA +
Preference number: 4 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQELRMD*ATRGTG
Trigger: TCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTC...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTGAGCTGCCCCTCCGAAAGCCACAGAAGGCCTaGCCCATCAGGTCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: YVRGKCRAITSPGELPLRKPQKA*PIRSPQ
Trigger: CTGCGGAGACCTGATGGGCCAGGCCTTCTGTGGCTT...TCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGGGTTCCAGCATTTTCTaGGCGATGCCATCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRGSSIF*AMPSEA
Trigger: GGCTTCTGATGGCATCGCCCAGAAAATGCTGGAACC...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGGCACATGTCACTCTGTaGCTGCGTGGCCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQAHVTL*LRGPVH
Trigger: ATGTACGGGGCCACGCAGTCACAGAGTGACATGTGC...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGCTCAGCCCAGTAAGCTaGGTGATGACACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRLSPVS*VMTLSI
Trigger: AATGGACAGTGTCATCACTCAGCTTACTGGGCTGAG...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp TATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTGAGCTGCCCCTCCGACGGCCAAACAGAAGGTaGAGTGACACCCGACACGAC +
Preference number: 4 (lower is better)
Translates to: YVRGKCRAITSPGELPLRRPNRR*SDTRHD
Trigger: GTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCG...TCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGTCTGCCGGGCCATCATaGTCCTCCCGTTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKSAGPS*SSRYRR
Trigger: TCTTCTGTAACGGGAGGATCATGATGGCCCGGCAGA...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAACACGTGGGACCGGAGTaGGGGCTAAGCCGGATTCGC +
Preference number: 4 (lower is better)
Translates to: CGGCGTQYLNTRPHRAAKHVGPE*GLSRIR
Trigger: GCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTG...TTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGTCCAGGGGAATGAGCTaGGAATGGACTGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQSRGMS*EWTGPH
Trigger: GTGTGGCCCAGTCCATTCTCAGCTCATTCCCCTGGA...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp ATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTTGGTAAAGATAGCCATTGGAGGGTGCTaGTGGCTGCGGCGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: IRLGEMGPHRATQQLVKIAIGGC*WLRRVG
Trigger: CCCGACACGCCGCAGCCAGCAGCACCCTCCAATGGC...TATCTTTACCAACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGGCTTCCCGGGCAGGTaGAGCTCGTCGCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRGFPGR*SSSLVR
Trigger: CCTCACCAGCGACGAGCTGCACCTGCCCGGGAAGCC...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCGCCAGGCCCAGCACGTaGATGGTGCGGCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLARPST*MVRLCA
Trigger: GGCGCACAGCCGCACCATGCACGTGCTGGGCCTGGC...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACTGTGTCCCCTGTGGCTaGCCCCATAGTGACACACTC +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHCVPCG*PHSDTL
Trigger: GAGTGTGTCACTATGGGGGCAGCCACAGGGGACACA...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGGTGCCTGTGAGCGTGTaGGGTTGTGTAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQVPVSV*GCVRRA
Trigger: TGCCCTCCTTACACAACCGCACACGCTCACAGGCAC...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGTTTGTGCCGCCTTCCTaGAGCATCCCCACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQFVPPS*SIPTSW
Trigger: CCAGGAAGTGGGGATGCTGCAGGAAGGCGGCACAAA...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCGGTGGCGTGGAACTCTaGAAAGACTCCTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EAFRVSVTRAGRHTPIPPGGVEL*KDSSLV
Trigger: CACAAGGGAGGAGTCTTTGCAGAGTTCCACGCCACC...GGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCCTCCGGCATTTTCTGGGCGATaGCATCAGAAGCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VISTVALAGKVAVGHTPPAFSGR*HQKPLC
Trigger: ACACAGGGGCTTCTGATGGCATCGCCCAGAAAATGC...CGGAGGGGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATTGGCCTCGGCGAGGTTaGGCATGGAGGCGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYWPRRG*AWRRAV
Trigger: CACCGCCCGCCTCCATGCCCAACCTCGCCGAGGCCA...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACACCATGGAGGAGCCTCTaGTGTCCCCCGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTPWRSL*CPPAWG
Trigger: GCCCCAGGCCGGGGGACACCAGAGGCTCCTCCATGG...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGCCATGGAGGAGCCTCTaGTGTCCCCCGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SITHKCNCSLATSVRSLPPWRSL*CPPAWG
Trigger: GCCCCAGGCCGGGGGACACCAGAGGCTCCTCCATGG...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACTCTCCACCGTGGCATTaGCTGGGAAAGTCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHSPPWH*LGKSLW
Trigger: CCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGA...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCTGTGCCATCCTAAGTaGTCTCTGTACCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: GAVISTVALAGKVAVGHTLCHPK*SLYPRP
Trigger: AGGTCTGGGGTACAGAGACCACTTAGGATGGCACAG...GGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGACTCCGATTCCACCCCTaGAGGGTCACCAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRLRFHP*RVTKRK
Trigger: CTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAG...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAACTCGCAGTCTTTCATaGGCCCGCCGCCGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRTRSLS*ARRRRE
Trigger: CTCCCGGCGGCGGCGGGCCCATGAAAGACTGCGAGT...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCGGCTTCATCAGGCGTaGCTCGTGGGAGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: AWLQPAKRIWCSECTGLGRLHQA*LVGGLR
Trigger: CCGGAGTCCTCCCACGAGCCACGCCTGATGAAGCCG...ACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAAGCATCCCCACTTCCTaGGGCCCTCCTGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: LWGLWHTISQHETSSSGQSIPTS*GPPGCR
Trigger: CCTGCATCCAGGAGGGCCCCAGGAAGTGGGGATGCT...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGTCCCTTGTGCCATTCTaGGCCAGAACAGAGATTTCG +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRSLVPF*ARTEIS
Trigger: CGAAATCTCTGTTCTGGCCCAGAATGGCACAAGGGA...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTTGGACATGCCATGTaGCCTCTCGGTTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: EAFRVSVTRAGRHTPIPPLGHAM*PLGFTR
Trigger: CCTGGTGAAACCGAGAGGCCACATGGCATGTCCAAG...GGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCTTGTCTGGTTGGAGCTaGTCAAGTAGGTGTGGAATC +
Preference number: 4 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAALSGWS*SSRCGI
Trigger: GATTCCACACCTACTTGATCAGCTCCAACCAGACAA...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATGCAGCTCGTCGCTGGTaGGGCTGGGCTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYAARRW*GWARSA
Trigger: TGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGC...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCATGGGCGGGCCCAGTGTaGGGCTGGCGCAGGGCGTGC +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKAWAGPV*GWRRAC
Trigger: GCACGCCCTGCGCCAGCCTCACACTGGGCCCGCCCA...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGTCTGCCGGGCCATCATaGTCCTCCCGTTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQSAGPS*SSRYRR
Trigger: TCTTCTGTAACGGGAGGATCATGATGGCCCGGCAGA...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGCCATTGGAGGGTGCTaGTGGCTGCGGCGTGTCGGG +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGAIGGC*WLRRVG
Trigger: CCCGACACGCCGCAGCCAGCAGCACCCTCCAATGGC...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGCAGCAGGGGCGTGGCTaGAGCCTGCAAAACGAATTT +
Preference number: 4 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQQQGRG*SLQNEF
Trigger: AAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTG...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACAAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTRLGSL*SRGVAA
Trigger: TGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCT...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGCGGCGAGGGCTCCCTTaGTCCCTCCTACCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGRRGLP*SLLPGG
Trigger: TCCTCCGGGTAGGAGGGAGCAAGGGAGCCCTCGCCG...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGACAGTGCAAGAACTCTaGAGGCCCTTTCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRTVQEL*RPFQHE
Trigger: TTCATGCTGAAAGGGCCTGCAGAGTTCTTGCACTGT...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGTCGAAGACATCACAGTaGAAGAACTCTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGSKTSQ*KNSAGP
Trigger: AGGGCCTGCAGAGTTCTTGCACTGTGATGTCTTCGA...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGATGATGCCAAGTGTGTaGCAGGGACAGGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQMMPSV*QGQGWR
Trigger: CCTCCAACCCTGTCCCTGGCACACACTTGGCATCAT...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCAGAGATTTCGCATTTTaGTGGCTTAGGGTGGGGACA +
Preference number: 4 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAARDFAF*WLRVGT
Trigger: TGTCCCCACCCTAAGCCAGCAAAATGCGAAATCTCT...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGCAGAGAAGCGTTTGCTaGAGGGTAGTCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQQRSVC*RVVRWA
Trigger: TGCCCACCTGACTACCCTGCAGCAAACGCTTCTCTG...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCTGCGGCGTGTCGGGCTaGATGTACCCTCTTCTGTCG +
Preference number: 4 (lower is better)
Translates to: NCSLATSVRSLPCVCHKGCGVSG*MYPLLS
Trigger: CGACAGAAGAGGGTACATCCAGCCCGACACGCCGCA...GCCCTTGTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCTGGTGTCCCCCGGCCTaGGGCCATGTGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLWCPPA*GHVGHT
Trigger: CGTGTGACCCACATGGCCCCAGGCCGGGGGACACCA...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GCTTTCCAGGGGAATGAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGCTGTGGGTGCTGATCTaGCTGTACTCGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: AFQGNELRMDWATRGTGVLWVLI*LYSQSF
Trigger: GAAAGACTGCGAGTACAGCCAGATCAGCACCCACAG...CACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTCATTCCCCTGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCCTGTGGGTGCTGATCTaGCTGTACTCGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPLWVLI*LYSQSF
Trigger: GAAAGACTGCGAGTACAGCCAGATCAGCACCCACAG...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp TATGTTCGTGGGAAATGCAGAGCCATCACCTCGCCAGGTGAGCTGCCCCTCCGAGGCTCACAGGTAGCGTaGACAAGGAGAATCCCTGTG +
Preference number: 4 (lower is better)
Translates to: YVRGKCRAITSPGELPLRGSQVA*TRRIPV
Trigger: CACAGGGATTCTCCTTGTCCACGCTACCTGTGAGCC...TCGGAGGGGCAGCTCACCTGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GCTTTCCAGGGGAATGAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGCGGTTTGGGAAGTTGTaGAAGCTCCTTTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AFQGNELRMDWATRGTGVRFGKL*KLLCGA
Trigger: AGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCG...CACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTCATTCCCCTGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCACCCAGGGACAGTGGTaGTCAAACCGTTCTACGCAG +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAATQGQW*SNRSTQ
Trigger: CTGCGTAGAACGGTTTGATCACCACTGTCCCTGGGT...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGGAATCCTGTTTGCTGTaGACGAAGAATGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGESCLL*TKNDVG
Trigger: ACCCACGTCATTCTTCGTTCACAGCAAACAGGATTC...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp CGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCTGGCCCCGTACATGGTaGTGCCATTGGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGCSLQNEFGALNALVLVWPRTW*CHWRVL
Trigger: CAGCACCCTCCAATGGCATCACCATGTACGGGGCCA...GACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACACATCACCTCGCCAGGTaGGCTGCCCCTCCGACCATC +
Preference number: 4 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTHHLAR*AAPPTI
Trigger: GATGGTCGGAGGGGCAGCTCACCTGGCGAGGTGATG...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCAATGTCACTCTGTGACTaGGTGGCCCCGTACATGGTG +
Preference number: 4 (lower is better)
Translates to: SEAFRVSVTRAGRHTPIPMSLCD*VAPYMV
Trigger: CACCATGTACGGGGCCACGCAGTCACAGAGTGACAT...TGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGATTTGGTGCTCTGAATaGACTGGTCTTGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGIWCSE*TGLGRT
Trigger: TGTGCGACCAAGACCAGTGCATTCAGAGCACCAAAT...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp CTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTGGCGTGGCTGCAGCCTaGAAAACGAATTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LFCRSGLVRWAHTGQHSSGVAAA*KTNLVL
Trigger: GAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCC...ACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp TGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAAGGGCCAGCCACCCTGTaGCATCCTAAGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CGGCGTQYLNTRPHRAAKGPATL*HPKWSL
Trigger: CAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCC...TTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TCGGGCTGGATGTACCCTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACCAAAGAAGAACAGGATaGCAGCGACTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: SGWMYPLLSIRLGEMGPHQRRTG*QRLQGW
Trigger: CCATCCCTGCAGTCGCTGGCATCCTGTTCTTCTTTG...GTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAGGGTACATCCAGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp GCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTTGCGGCGTGTCGGGCTaGATGTACCCTCTTCTGTCG +
Preference number: 4 (lower is better)
Translates to: AWLQPAKRIWCSECTGLGCGVSG*MYPLLS
Trigger: CGACAGAAGAGGGTACATCCAGCCCGACACGCCGCA...ACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp AATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCCACCGTGGCATTGGCTaGGAAAGTCGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: NCSLATSVRSLPCVCHKGHRGIG*ESRCGT
Trigger: TGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTG...GCCCTTGTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGAGGACGTCATTTTATTaGCTGTCCACGGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRRTSFY*LSTGSF
Trigger: GAAACTTCCCGTGGACAGCCAATAAAATGACGTCCT...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCGGTGTCGCTGCGCCTaGCAGCCTAGTCGAATCCGC +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYRCRCA*QPSRIR
Trigger: GCGGATTCGACTAGGCTGCCAGGCGCAGCGACACCG...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACTTTGCTGGCTTAGGGTaGGGACATGGCATTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHFAGLG*GHGIVL
Trigger: GAGGACAATGCCATGTCCCCACCCTAAGCCAGCAAA...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTGGTTTGCTCCTCACTTaGAACCACAGCTGGCAATCC +
Preference number: 4 (lower is better)
Translates to: ASEAFRVSVTRAGRHTPIGLLLT*NHSWQS
Trigger: GGATTGCCAGCTGTGGTTCCAAGTGAGGAGCAAACC...AATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGGAAGCAGTTGGTTCCTaGCATGAAGAGGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGEAVGS*HEEDGC
Trigger: ACAACCATCCTCTTCATGCCAGGAACCAACTGCTTC...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 72 bp GGAGCAGAGACGGTTTGGGAAGTTGTGGAAGCTCCTTaGTGGGGCTGTCACTTTGGGCTCACAGGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: GAETVWEVVEAP*WGCHFGLTGSV
Trigger: CACGCTACCTGTGAGCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCTCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCTTGTCTGGTTGGAGCTaGTCAAGTAGGTGTGGAATC +
Preference number: 4 (lower is better)
Translates to: EAFRVSVTRAGRHTPIPPLSGWS*SSRCGI
Trigger: GATTCCACACCTACTTGATCAGCTCCAACCAGACAA...GGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAAAGAATCCCCGCTCCGTaGGGGGACGGCGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGERIPAP*GDGAGP
Trigger: CGGACCAGCGCCGTCCCCTCACGGAGCGGGGATTCT...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp AAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAGGACTCCGGGGTCGCTaGAGCTGGTGCGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KKAATSLFPLLSKHSGWGGLRGR*SWCGAG
Trigger: CCCTGCTCCGCACCAGCTTCAGCGACCCCGGAGTCC...TCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATACAGAACCTTCTCCCTaGGCGTCCCCTCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYTEPSP*ASPPLS
Trigger: GGAGAGGGGAGGGGACGCTCAGGGAGAAGGTTCTGT...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGACATCGCTCATTCCTCTaGTGCTGGGTTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRHRSFL*CWVSFS
Trigger: TGAAAAAGAAACCCAGCATCAGAGGAATGAGCGATG...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGGATGCCATTGGAGGGTaGTGCTGGCTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SITHKCNCSLATSVRSLPDAIGG*CWLRRV
Trigger: GACACGCCGCAGCCAGCAGCACCCTCCAATGGCATC...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGACACATAAGTGCAATTaGAGTCTGGCCACAAGCGTC +
Preference number: 4 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKTHKCN*SLATSV
Trigger: GACGCTTGTGGCCAGACTGCAATTGCACTTATGTGT...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCCAAAGAAGAACAGGATaGCAGCGACTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAAQRRTG*QRLQGW
Trigger: CCATCCCTGCAGTCGCTGGCATCCTGTTCTTCTTTG...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GCTTTCCAGGGGAATGAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGCTTCCGATCAACTGTTaGACGGCAAACTGCAAACGT +
Preference number: 4 (lower is better)
Translates to: AFQGNELRMDWATRGTGVLPINC*TANCKR
Trigger: ACGTTTGCAGTTTGCCGTGCAACAGTTGATCGGAAG...CACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTCATTCCCCTGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACTATGTTCGTGGGAAATaGAGAGCCATCACCTCGCCA +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHYVRGK*RAITSP
Trigger: TGGCGAGGTGATGGCTCTGCATTTCCCACGAACATA...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTATTGGAGGGTGCTGCTaGCTGCGGCGTGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: AKRIWCSECTGLGRTCHSIGGCC*LRRVGL
Trigger: CAGCCCGACACGCCGCAGCCAGCAGCACCCTCCAAT...AGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAGGCCCAGCACGTGCATaGTGCGGCTGTGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKAGPARA*CGCAPG
Trigger: CCCTGGCGCACAGCCGCACCATGCACGTGCTGGGCC...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCACTCCTGCTGCCCATaGAGGAGCCTCTGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYHSCCP*RSLWCP
Trigger: GGGACACCAGAGGCTCCTCCATGGGCAGCAGGAGTG...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp TGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAACACCGTGGCATTGGCTaGGAAAGTCGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: CGGCGTQYLNTRPHRAAKHRGIG*ESRCGT
Trigger: TGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTG...TTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGGGAACGAGCATCTTTTaGTTGGGCATAACGCAACTG +
Preference number: 4 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKGTSIF*LGITQL
Trigger: CAGTTGCGTTATGCCCAACCAAAAGATGCTCGTTCC...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAGAAAGCATGTCTCCTTaGACATGCCATGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQGRADTLRFHPWRVTKRESMSP*TCHVAS
Trigger: AGAGGCCACATGGCATGTCCAAGGAGACATGCTTTC...TCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATTGGCCCCGTACATGGTaGTGCCATTGGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYWPRTW*CHWRVL
Trigger: CAGCACCCTCCAATGGCATCACCATGTACGGGGCCA...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGACGGCCAAACAGAAGGTaGAGTGACACCCGACACGAC +
Preference number: 4 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRRPNRR*SDTRHD
Trigger: GTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCG...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCCAGGGATGGCAGGGGTaGTTTTCACCGCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLQGWQG*FSPPGT
Trigger: CGTACCTGGCGGTGAAAATCACCCCTGCCATCCCTG...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCAGTTATCACAAAGGCTaGAATGGGAGGCGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RGCSLQNEFGALNALVLVSYHKG*NGRREG
Trigger: CCCCTCGCGCCTCCCATTGCAGCCTTTGTGATAACT...GACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp CGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCATGTCACTCTGTGACTaGGTGGCCCCGTACATGGTG +
Preference number: 4 (lower is better)
Translates to: RGCSLQNEFGALNALVLVMSLCD*VAPYMV
Trigger: CACCATGTACGGGGCCACGCAGTCACAGAGTGACAT...GACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp GCGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCAGCAGGGGCGTGGCTaGAGCCTGCAAAACGAATTT +
Preference number: 4 (lower is better)
Translates to: AWLQPAKRIWCSECTGLGQQGRG*SLQNEF
Trigger: AAATTCGTTTTGCAGGCTGCAGCCACGCCCCTGCTG...ACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp TCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTCATCACGCCAGGCCCAGCACGTaGATGGTGCGGCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SKITEDVILLAVHGKFHHARPST*MVRLCA
Trigger: GGCGCACAGCCGCACCATGCACGTGCTGGGCCTGGC...GTGATGAAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCTTAGTCTCAGTTCGTTaGACTGTCTTCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAALVSVR*TVFQQN
Trigger: GTTTTGTTGGAAGACAGTGCAACGAACTGAGACTAA...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACCTCTGCAGCCCCGGTaGCACCTCTCCACAGACGCC +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKAPLQPR*HLSTDA
Trigger: GGCGTCTGTGGAGAGGTGGCACCGGGGCTGCAGAGG...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CGCAGATCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTGCGACCCGGTGTCGCTaGGCCTGGCAGCCTAGTCGA +
Preference number: 4 (lower is better)
Translates to: RRSKITEDVILLAVHGKFATRCR*AWQPSR
Trigger: TCGACTAGGCTGCCAGGCGCAGCGACACCGGGTCGC...AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGTTGCACGGCAAACTaGAAACGTAGAGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPCCTAN*KRRANS
Trigger: GGAATTTGCTCTACGTTTGCAGTTTGCCGTGCAACA...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGAGCCAGGAGAGGAGTTaGTGTGTCCCCTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGSQERS*CVPCGC
Trigger: GCAGCCACAGGGGACACAGCAACTCCTCTCCTGGCT...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGACCTCGCCAGGTGAGCTaGCCCTCCGACCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: KKAATSLFPLLSKHSGWGPRQVS*PSDHPS
Trigger: GGAGGGATGGTCGGAGGGGCAGCTCACCTGGCGAGG...TCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAACTGAGAGGCCAACGATaGACCAGACAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LWGLWHTISQHETSSSGQLRGQR*TRQRRS
Trigger: GCTTCTTCTCTGTCTGGTCCATCGTTGGCCTCTCAG...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp ACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCACTGAGAGGCCAACGATaGACCAGACAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: TVGVVAHNISTRDLIERPLRGQR*TRQRRS
Trigger: GCTTCTTCTCTGTCTGGTCCATCGTTGGCCTCTCAG...TGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCATCACGTCCGCGAGCGTaGCCTCGGCGAGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKASRPRA*PRRGWA
Trigger: TGCCCAACCTCGCCGAGGCCACGCTCGCGGACGTGA...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGCCCAGCACGTGCATaGTGCGGCTGTGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLGPARA*CGCAPG
Trigger: CCCTGGCGCACAGCCGCACCATGCACGTGCTGGGCC...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCAACTCGCAGTCTTTCATaGGCCCGCCGCCGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: GFTRHLETSRASKRVVHSTRSLS*ARRRRE
Trigger: CTCCCGGCGGCGGCGGGCCCATGAAAGACTGCGAGT...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCCCTGACAAACAGAAGTaGGCGCCCCAGGGGGCATCA +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLPDKQK*APQGAS
Trigger: TGATGCCCCCTGGGGCGCCCACTTCTGTTTGTCAGG...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 72 bp GTGGAAGAAAGCAAGGAGCAGAGACGGTTTGGGAAGTaGTGGAAGCTCCTTTGTGGGGCTGTCACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: VEESKEQRRFGK*WKLLCGAVTLG
Trigger: GCCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCTCTGCTCCTTGCTTTCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp ATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTTGGTAAAGATAACCCAGGGACAGTGGTaGTCAAACCGTTCTACGCAG +
Preference number: 4 (lower is better)
Translates to: IRLGEMGPHRATQQLVKITQGQW*SNRSTQ
Trigger: CTGCGTAGAACGGTTTGATCACCACTGTCCCTGGGT...TATCTTTACCAACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCATGGGTCACACGGAGCTaGGCTTCACCAGGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKAWVTRS*ASPGRA
Trigger: TGCGCGGCCTGGTGAAGCTCAGCTCCGTGTGACCCA...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGAGGAAGAAAATTCAAATaGAACCAAGCTCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRGRKFK*NQALSI
Trigger: GATGCTGAGAGCTTGGTTTCATTTGAATTTTCTTCC...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGCATCACACACGGAGGTaGAGACTGTGGGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SITHKCNCSLATSVRSLPHHTRR*RLWGLW
Trigger: CCACAACCCCCACAGTCTTCACCTCCGTGTGTGATG...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAGGAGCTGTGGGTGCTaGTCTGGCTGTACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLRSCGC*SGCTRS
Trigger: ACTGCGAGTACAGCCAGATCAGCACCCACAGCTCCT...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGAGGAGCTGTGGGTGCTaGTCTGGCTGTACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGRSCGC*SGCTRS
Trigger: ACTGCGAGTACAGCCAGATCAGCACCCACAGCTCCT...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTCGTTCCCTTCTAGGTaGCCAATGAAAGTGAACAAA +
Preference number: 4 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPSFPSR*PMKVNK
Trigger: TTTGTTCACTTTCATTGGTCACCTAGAAGGGAACGA...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGGCGTGGCTGCAGCCTaGAAAACGAATTTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRGVAAA*KTNLVL
Trigger: GAGCACCAAATTCGTTTTGCAGGCTGCAGCCACGCC...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLRLGSL*SRGVAA
Trigger: TGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCT...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp AAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCAGCATAACACATAAGTaGAATTGCAGTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: KPSVCLSQGRADTLRFHPSITHK*NCSLAT
Trigger: TGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT...GGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCCTCCGTTAGTCTCAGTTCGTTaGACTGTCTTCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: VISTVALAGKVAVGHTPPLVSVR*TVFQQN
Trigger: GTTTTGTTGGAAGACAGTGCAACGAACTGAGACTAA...CGGAGGGGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGCGACCCGGTGTCGCTaGGCCTGGCAGCCTAGTCGA +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLATRCR*AWQPSR
Trigger: TCGACTAGGCTGCCAGGCGCAGCGACACCGGGTCGC...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp ACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAATGTCTCCTTGGACATaGCATGTGGCCTCTCGGTTT +
Preference number: 4 (lower is better)
Translates to: TVGVVAHNISTRDLIERPMSPWT*HVASRF
Trigger: AAACCGAGAGGCCACATGGCATGTCCAAGGAGACAT...TGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TCGGGCTGGATGTACCCTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACTTTAGGAATCCTGTTTaGTGTGAACCCAGGGACAGT +
Preference number: 4 (lower is better)
Translates to: SGWMYPLLSIRLGEMGPHFRNPV*CEPRDS
Trigger: ACTGTCCCTGGGTTCACAGCAAACAGGATTCCTAAA...GTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAGGGTACATCCAGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp CGCAGATCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTATTGGAGGGTGCTGCTaGCTGCGGCGTGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRSKITEDVILLAVHGKFIGGCC*LRRVGL
Trigger: CAGCCCGACACGCCGCAGCCAGCAGCACCCTCCAAT...AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAATTGGAGGGTGCTGCTaGCTGCGGCGTGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KKAATSLFPLLSKHSGWGIGGCC*LRRVGL
Trigger: CAGCCCGACACGCCGCAGCCAGCAGCACCCTCCAAT...TCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGTGGTGTCCCCCGGCCTaGGGCCATGTGGGTCACACG +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLWCPPA*GHVGHT
Trigger: CGTGTGACCCACATGGCCCCAGGCCGGGGGACACCA...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTCTGTACCCCAGACCTaGGGCTGTCATCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: SITHKCNCSLATSVRSLPSVPQT*GCHLHR
Trigger: ACGGTGGAGATGACAGCCCCAGGTCTGGGGTACAGA...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGACACAGACGGCAGCGTaGCATGCAGATCCACACCTG +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGTQTAA*HADPHL
Trigger: CAGGTGTGGATCTGCATGCCACGCTGCCGTCTGTGT...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp TGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAAGGAGCAGAGACGGTTTaGGAAGTTGTGGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CGGCGTQYLNTRPHRAAKGAETV*EVVEAP
Trigger: AGGAGCTTCCACAACTTCCCAAACCGTCTCTGCTCC...TTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCTTCCCAGTCCCCTATTaGATAAATGATGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAAFPVPY*INDAKC
Trigger: ACACTTGGCATCATTTATCCAATAGGGGACTGGGAA...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAGATTTCGCATTTTGCTaGCTTAGGGTGGGGACATGG +
Preference number: 4 (lower is better)
Translates to: LWGLWHTISQHETSSSGQDFAFC*LRVGTW
Trigger: CCATGTCCCCACCCTAAGCCAGCAAAATGCGAAATC...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGGCCAATTTCTGCAGAACGGAGTGACAGGTCACTGTGCCCTCCTGGATGCAGTGTCTCCGCAGGAACATaGCTCATAAAATGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GPISAERSDRSLCPPGCSVSAGT*LIKWVC
Trigger: GCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC...ACTGCATCCAGGAGGGCACAGTGACCTGTCACTCCGTTCTGCAGAAATTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCTGTGAAAATCCATCTTaGCTCTATTATCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAACENPS*LYYQDH
Trigger: ATGGTCCTGATAATAGAGCCAAGATGGATTTTCACA...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAGAATCCTGTTTGCTGTaGACGAAGAATGACGTGGGT +
Preference number: 4 (lower is better)
Translates to: LWGLWHTISQHETSSSGQESCLL*TKNDVG
Trigger: ACCCACGTCATTCTTCGTTCACAGCAAACAGGATTC...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTGCACATGTCACTCTGTaGCTGCGTGGCCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: AKRIWCSECTGLGRTCHSAHVTL*LRGPVH
Trigger: ATGTACGGGGCCACGCAGTCACAGAGTGACATGTGC...AGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCACTTCTGGGATTGAGTaGCACGTTAACACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAATSGIE*HVNTEG
Trigger: TCCTTCTGTGTTAACGTGTCACTCAATCCCAGAAGT...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGAGGGCACTGCCCCATaGATTACACATTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGEGTAP*ITHCRW
Trigger: CCACCTGCAATGTGTAATTCATGGGGCAGTGCCCTC...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACACAAGGAGAATCCCTGTaGGTTGGTGCCTGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTQGESL*VGACER
Trigger: ACGCTCACAGGCACCAACTCACAGGGATTCTCCTTG...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCGAGAACGAACGCAGATaGATTTTTAAACAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GAVISTVALAGKVAVGHTENERR*IFKQQN
Trigger: ATTCTGCTGTTTAAAAATTCATCTGCGTTCGTTCTC...GGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAGTTATCACAAAGGCTaGAATGGGAGGCGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLSYHKG*NGRREG
Trigger: CCCCTCGCGCCTCCCATTGCAGCCTTTGTGATAACT...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCGAACGAAGAATGACGTaGGTGATAACGAATGCAAAT +
Preference number: 4 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAAERRMT*VITNAN
Trigger: ATTTGCATTCGTTATCACCCACGTCATTCTTCGTTC...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCGCACACTGAGAGGCCAACGATaGACCAGACAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LQPAKRIWCSECTGLGRTLRGQR*TRQRRS
Trigger: GCTTCTTCTCTGTCTGGTCCATCGTTGGCCTCTCAG...TGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCCCTGCAAAACGAATTTaGTGCTCTGAATGCACTGGT +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAAPAKRI*CSECTG
Trigger: ACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGG...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTCCTGCAAAACGAATTTaGTGCTCTGAATGCACTGGT +
Preference number: 4 (lower is better)
Translates to: LFCRSGLVRWAHTGQHSSPAKRI*CSECTG
Trigger: ACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGG...ACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAGGACGTCATTTTATTaGCTGTCCACGGGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAARTSFY*LSTGSF
Trigger: GAAACTTCCCGTGGACAGCCAATAAAATGACGTCCT...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp ACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCACGTGATCCTGGCTTCTaGGAATTTTTCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TVGVVAHNISTRDLIERPRDPGF*EFFTVR
Trigger: CCTCACTGTGAAAAATTCCCAGAAGCCAGGATCACG...TGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCAGTGCCGGGAAGCCTGTaGTTCCCTGGAGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: GFTRHLETSRASKRVVHSVPGSL*FPGALL
Trigger: CAGGAGTGCTCCAGGGAACCACAGGCTTCCCGGCAC...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCCTCAATGTATTCTTGTaGATGGATGAAGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAALNVFL*MDEGQL
Trigger: GAGCTGCCCTTCATCCATCCACAAGAATACATTGAG...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGAAAATTCAACACTTCCTaGGTAGAAAAGTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRKFNTS*VEKSLQ
Trigger: TTGCAGAGACTTTTCTACCCAGGAAGTGTTGAATTT...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp CGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCTTGTCTGGTTGGAGCTaGTCAAGTAGGTGTGGAATC +
Preference number: 4 (lower is better)
Translates to: RGCSLQNEFGALNALVLVLSGWS*SSRCGI
Trigger: GATTCCACACCTACTTGATCAGCTCCAACCAGACAA...GACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAATGGCCCCGTACATGGTaGTGCCATTGGAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGEWPRTW*CHWRVL
Trigger: CAGCACCCTCCAATGGCATCACCATGTACGGGGCCA...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACGGAAGAAAATTCAAATaGAACCAAGCTCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHGRKFK*NQALSI
Trigger: GATGCTGAGAGCTTGGTTTCATTTGAATTTTCTTCC...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGAAACAGAAGGTGAAGTaGCACCCGACACGACGGAAC +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGKQKVK*HPTRRN
Trigger: GTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTT...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR TCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGCCCTTCAAAGTCTCTaGCCAGTTCTGGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGALQSL*PVLVPA
Trigger: TGCTGGAACCAGAACTGGTCAGAGACTTTGAAGGGC...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGAGGATGGTTGTAGGCTaGGGTCTGAAGGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SITHKCNCSLATSVRSLPRMVVG*GLKGEV
Trigger: GACTTCTCCCTTCAGACCTCAGCCTACAACCATCCT...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCACTTTAGGAATCCTGTTTaGTGTGAACGAAGAATGACG +
Preference number: 4 (lower is better)
Translates to: GQTHSDSTPGGSPKESSHFRNPV*CERRMT
Trigger: CGTCATTCTTCGTTCACAGCAAACAGGATTCCTAAA...GTGGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CGTGGCTGCAGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCATTTGGTGCTCTGAATaGACTGGTCTTGGTCGCACA +
Preference number: 4 (lower is better)
Translates to: RGCSLQNEFGALNALVLVIWCSE*TGLGRT
Trigger: TGTGCGACCAAGACCAGTGCATTCAGAGCACCAAAT...GACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCTGCAGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGCAAAGAAGAACAGGATaGCAGCGACTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: SITHKCNCSLATSVRSLPQRRTG*QRLQGW
Trigger: CCATCCCTGCAGTCGCTGGCATCCTGTTCTTCTTTG...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp GGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCTTTTCTATACGTGCATaGAGCATGACAATAAAGATG +
Preference number: 4 (lower is better)
Translates to: GAVISTVALAGKVAVGHTFSIRA*SMTIKM
Trigger: CATCTTTATTGTCATGCTGCATGCACGTATAGAAAA...GGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAAGCACAGACACTTGTTTaGAAGGCTCAGCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGEAQTLV*KAQPGA
Trigger: CGCGCCGGGCTGAGCCTTGCAAACAAGTGTCTGTGC...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS-3UTR CCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGGAACGAAGAATGACGTaGGTGATAACGAATGCAAAT +
Preference number: 4 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQERRMT*VITNAN
Trigger: ATTTGCATTCGTTATCACCCACGTCATTCTTCGTTC...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGCTGTGCCATCCTAAGTaGTCTCTGTACCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGLCHPK*SLYPRP
Trigger: AGGTCTGGGGTACAGAGACCACTTAGGATGGCACAG...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACACTCCGATTCCACCCCTaGAGGGTCACCAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTLRFHP*RVTKRK
Trigger: CTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAG...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACAAGTGCAATTGCAGTCTaGCCACAAGCGTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTSAIAV*PQASEA
Trigger: GGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACT...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAAAGACTGTGGGGGTTGTaGCACACAATATCTCAACAC +
Preference number: 4 (lower is better)
Translates to: CGGCGTQYLNTRPHRAAKRLWGL*HTISQH
Trigger: GTGTTGAGATATTGTGTGCCACAACCCCCACAGTCT...TTTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAAACCCCTCCCAGGGGTaGGGACAACCACGCACGTTT +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKANPSQG*GQPRTF
Trigger: AAACGTGCGTGGTTGTCCCCACCCCTGGGAGGGGTT...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAAAAGGCCGCAGTAAGCTaGGGGGTGGCGTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGEKAAVS*GVAWNS
Trigger: AGAGTTCCACGCCACCCCCCAGCTTACTGCGGCCTT...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCCACCCATTTATCTAGTTTTGTaGCAGCTGCAAATTCGGTTG +
Preference number: 4 (lower is better)
Translates to: EAFRVSVTRAGRHTPIPPIYLVL*QLQIRL
Trigger: CAACCGAATTTGCAGCTGCCACAAAACTAGATAAAT...GGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp AGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTTGGTAAAGATATTTACGAATTTGGTGCTCTaGATGCACTGGTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: RLGEMGPHRATQQLVKIFTNLVL*MHWSWS
Trigger: CGACCAAGACCAGTGCATTCAGAGCACCAAATTCGT...AAATATCTTTACCAACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp TTACCTCTTTTATTTGACCAGGATCCTTTAATGTCCTCATTTGTTGTCTGGTTGGCAGCTCGTCGCTGGTaGGGCTGGGCTCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPLLFDQDPLMSSFVVWLAARRW*GWARSA
Trigger: TGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGC...CAACCAGACAACAAATGAGGACATTAAAGGATCCTGGTCAAATAAAAGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR TCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAGCCCAGTAAGCTaGGTGATGACACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYLSPVS*VMTLSI
Trigger: AATGGACAGTGTCATCACTCAGCTTACTGGGCTGAG...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TTACCTCTTTTATTTGACCAGGATCCTTTAATGTCCTCATTTGTTGTCTGGTTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPLLFDQDPLMSSFVVWLRLGSL*SRGVAA
Trigger: TGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCT...CAACCAGACAACAAATGAGGACATTAAAGGATCCTGGTCAAATAAAAGAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAAGTCAAGGACACCTACTaGCAATTTTGGCAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LWGLWHTISQHETSSSGQVKDTY*QFWQVH
Trigger: ATGAACTTGCCAAAATTGGCAGTAGGTGTCCTTGAC...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCAGCTGCAAATTCGGTTaGTCCAGAAACCATCTAATC +
Preference number: 4 (lower is better)
Translates to: NCSLATSVRSLPCVCHKGSCKFG*SRNHLI
Trigger: GATTAGATGGTTTCTGGAGCAACCGAATTTGCAGCT...GCCCTTGTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAATCACATATATGTTCGTaGGAAATGCAGAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: LWGLWHTISQHETSSSGQSHICS*EMQSHH
Trigger: GTGATGGCTCTGCATTTCCCACGAACATATATGTGA...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGATCACATTTGAAAGCTaGAACGAGCATCTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQITFES*NEHLLV
Trigger: AACCAAAAGATGCTCGTTCCAGCTTTCAAATGTGAT...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCAACCCAGGGACAGTGGTaGTCAAACCGTTCTACGCAG +
Preference number: 4 (lower is better)
Translates to: GFTRHLETSRASKRVVHSTQGQW*SNRSTQ
Trigger: CTGCGTAGAACGGTTTGATCACCACTGTCCCTGGGT...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGACCCTAAGCCGAGGCTaGGAAGCAGTTGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLTLSRG*EAVGSW
Trigger: CCAGGAACCAACTGCTTCTCAGCCTCGGCTTAGGGT...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAAACTGGTGGCCCATGTaGTCATCTTTCCGGGGCATC +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKANWWPM*SSFRGI
Trigger: GATGCCCCGGAAAGATGAGCACATGGGCCACCAGTT...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACAACACATAAGTGCAATTaGAGTCTGGCCACAAGCGTC +
Preference number: 4 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTTHKCN*SLATSV
Trigger: GACGCTTGTGGCCAGACTGCAATTGCACTTATGTGT...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CGCAGATCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTCTGTCATCTCCACCGTaGCATTGGCTGGGAAAGTCG +
Preference number: 4 (lower is better)
Translates to: RRSKITEDVILLAVHGKFLSSPP*HWLGKS
Trigger: CGACTTTCCCAGCCAATGCCACGGTGGAGATGACAG...AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACAAGACTGTGGGGGTTGTaGCACACAATATCTCAACAC +
Preference number: 4 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTRLWGL*HTISQH
Trigger: GTGTTGAGATATTGTGTGCCACAACCCCCACAGTCT...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp AACTGTTGCACGGCAAACTGCAAACGTAGAGCAAATTCCACTAAGATGGTGTCAATTCGCGGTCACCCATaGAGCACCGTTCTCATCAGG +
Preference number: 4 (lower is better)
Translates to: NCCTANCKRRANSTKMVSIRGHP*STVLIR
Trigger: CCTGATGAGAACGGTGCTCCATGGGTGACCGCGAAT...TGACACCATCTTAGTGGAATTTGCTCTACGTTTGCAGTTTGCCGTGCAACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGTGGGAAGAAGGGCTaGTCACAGGAGAGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLGGKKG*SQESGN
Trigger: GTTGCCACTCTCCTGTGACCAGCCCTTCTTCCCACC...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp CGCAGATCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTAAACAGAAGGTGAAGTaGCACCCGACACGACGGAAC +
Preference number: 4 (lower is better)
Translates to: RRSKITEDVILLAVHGKFKQKVK*HPTRRN
Trigger: GTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTT...AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCCCCAGTTCAAAGATTTaGCTTTTGGTTGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLPSSKI*LLVVWG
Trigger: TCCCCAGACAACCAAAAGTCAAATCTTTGAACTGGG...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATTTATGTGAAGACAAGTaGGTCGTGATCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYLCEDK*VVILAS
Trigger: AGAAGCCAGGATCACGACTCACTTGTCTTCACATAA...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TTACCTCTTTTATTTGACCAGGATCCTTTAATGTCCTCATTTGTTGTCTGGTTGGATGCCATTGGAGGGTaGTGCTGGCTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: LPLLFDQDPLMSSFVVWLDAIGG*CWLRRV
Trigger: GACACGCCGCAGCCAGCAGCACCCTCCAATGGCATC...CAACCAGACAACAAATGAGGACATTAAAGGATCCTGGTCAAATAAAAGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGAACTGGTGGCCCATGTaGTCATCTTTCCGGGGCATC +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLNWWPM*SSFRGI
Trigger: GATGCCCCGGAAAGATGAGCACATGGGCCACCAGTT...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp CGCAGATCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTAAGACTCCTCCCTTGTaGCATTCTGGGCCAGAACAG +
Preference number: 4 (lower is better)
Translates to: RRSKITEDVILLAVHGKFKTPPL*HSGPEQ
Trigger: CTGTTCTGGCCCAGAATGGCACAAGGGAGGAGTCTT...AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAAGTGCAATTGCAGTCTaGCCACAAGCGTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKASAIAV*PQASEA
Trigger: GGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACT...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCCTATTATCAGGACCATaGACAATGGGCAGATGGACA +
Preference number: 4 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLLLSGP*TMGRWT
Trigger: TGTCCATCTGCCCATTGTCCATGGTCCTGATAATAG...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAAACGAATTTGGTGCTCTaGATGCACTGGTCTTGGTCG +
Preference number: 4 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGETNLVL*MHWSWS
Trigger: CGACCAAGACCAGTGCATTCAGAGCACCAAATTCGT...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR TCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACACATTTTTCTTGCTGTTaGGTCAGACAAGAAGGCCTA +
Preference number: 4 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTHFSCC*VRQEGL
Trigger: TAGGCCTTCTTGTCTGACTCAACAGCAAGAAAAATG...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GTCTCCGCAGGAACATGGCTCATAAAATGGGTTTGCTCCTCACTTGGAACCACAGCAAAACGAATTTGGTaGTCTGAATGCACTGGTCTT +
Preference number: 4 (lower is better)
Translates to: VSAGTWLIKWVCSSLGTTAKRIW*SECTGL
Trigger: AAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGC...TGTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGTTCCTGCGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTTGGTAAAGATATTTGCAAAACGAATTTGGTaGTCTGAATGCACTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RLGEMGPHRATQQLVKIFAKRIW*SECTGL
Trigger: AAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGC...AAATATCTTTACCAACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR GCA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAATTACAGAGAAGCGTTTaGTGCAGGGTAGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGELQRSV*CRVVRW
Trigger: CCACCTGACTACCCTGCAGCAAACGCTTCTCTGTAA...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 72 bp GTACGCAGATCCAAAATAACAGAGGACGTCATTTTATaGGCTGTCCACGGGAAGTTTCATCACACACGGAGG +
Preference number: 4 (lower is better)
Translates to: VRRSKITEDVIL*AVHGKFHHTRR
Trigger: CCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACACACAAGATGCTTGTCTaGTTTTCAATCCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTHKMLV*FSIHSV
Trigger: CACAGAATGGATTGAAAAGCAGACAAGCATCTTGTG...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTCATCACGTCTCTGACCAGTTCTaGTTCCAGCATTTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SKITEDVILLAVHGKFHHVSDQF*FQHFLG
Trigger: GCCCAGAAAATGCTGGAACCAGAACTGGTCAGAGAC...GTGATGAAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 72 bp ATACCTTTACTAGGACCTCAAGTTGCACTTCTGGGATaGAGTGACACGTTAACACAGAAGGAAGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: IPLLGPQVALLG*SDTLTQKEAQK
Trigger: CTTCTGGGCTTCCTTCTGTGTTAACGTGTCACTCAATCCCAGAAGTGCAACTTGAGGTCCTAGTAAAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACAACCCAGAATGCTCTaGGAAAAAGTTAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKAQPRML*EKVSKA
Trigger: AGCCTTGCTAACTTTTTCCCAGAGCATTCTGGGTTG...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 72 bp GAAATCATCACATTTGAAAGCTGGAACGAGCATCTTTaGGTTGGGCATAACGCAACTGCTGGGCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: EIITFESWNEHL*VGHNATAGPIS
Trigger: AGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAAGATGCTCGTTCCAGCTTTCAAATGTGATGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAAGCATAACACATAAGTaGAATTGCAGTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GGSPKESSHFSISIVVKASITHK*NCSLAT
Trigger: TGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR GCA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACATCCATTTTCTATACGTaGATGCAGCATGACAATAAA +
Preference number: 4 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTSIFYT*MQHDNK
Trigger: TTTATTGTCATGCTGCATGCACGTATAGAAAATGGA...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR GCA 90 bp AAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGATTTAGGAATCCTGTTTaGTGTGAACGAAGAATGACG +
Preference number: 4 (lower is better)
Translates to: KKAATSLFPLLSKHSGWGFRNPV*CERRMT
Trigger: CGTCATTCTTCGTTCACAGCAAACAGGATTCCTAAA...TCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CCA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGACATGGCTCATAAAATaGGTTTGCTCCTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: PKESSHFSISIVVKALRLTWLIK*VCSSLG
Trigger: TCCAAGTGAGGAGCAAACCCATTTTATGAGCCATGT...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 72 bp GCTATTTATCTAGTTTTGTGGCAGCTGCAAATTCGGTaGCTCCAGAAACCATCTAATCTTCAATCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: AIYLVLWQLQIR*LQKPSNLQSPN
Trigger: GTTGGGAGATTGAAGATTAGATGGTTTCTGGAGCAACCGAATTTGCAGCTGCCACAAAACTAGATAAATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
3UTR CAA 72 bp CACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTaGGGGAAGAAAATTCAAATGAAACCAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: HFSISIVVKALR*GKKIQMKPSSQ
Trigger: CTGAGAGCTTGGTTTCATTTGAATTTTCTTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
3UTR CAA 72 bp TATAAATATCTCCCAGTTCAAAGATTTGACTTTTGGTaGTCTGGGGACCATTCCTCGCTAGGGACATTTCAA +
Preference number: 4 (lower is better)
Translates to: YKYLPVQRFDFW*SGDHSSLGTFQ
Trigger: TTGAAATGTCCCTAGCGAGGAATGGTCCCCAGACAACCAAAAGTCAAATCTTTGAACTGGGAGATATTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CCA 90 bp TCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTCATCACACTACTTTTAATGGCTaGATTAATGGACTAACACCT +
Preference number: 4 (lower is better)
Translates to: SKITEDVILLAVHGKFHHTTFNG*INGLTP
Trigger: AGGTGTTAGTCCATTAATCCAGCCATTAAAAGTAGT...GTGATGAAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS GCA 90 bp CCCCGGCGCGAGGAGGGCCGCGGGGACACAGCACAGACACTTGTTTaGAAGGCTCAGCCCGGCGCGCGCGCGGCGCTCCGAGTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: PRREEGRGDTAQTLV*KAQPGARAALRVGP
Trigger: CGGACCCACTCGGAGCGCCGCGCGCGCGCCGGGCTGAGCCTTGCAAACAAGTGTCTGTGCTGTGTCCCCGCGGCCCTCCTCGCGCCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS GCA 90 bp ACACGAGGCGGCGGCCCCGGCGCCGGCTTCCTCGGGAGCCACTTCTaGGGCGCGGCCAGGTTGGGTCCACTCCTTCCTCCGGCAGCGGAT +
Preference number: 5 (lower is better)
Translates to: TRGGGPGAGFLGSHF*GAARLGPLLPPAAD
Trigger: ATCCGCTGCCGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAGGAAGCCGGCGCCGGGGCCGCCGCCTCGTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS TCA 90 bp GCGTGCCCAGGCCAGGCTTCCCGGGCAGGTGCAGCTCGTCGCTGGTaGGGCTGGGCTCGCTCTGCAGCAGGGGCGTGGCTGCAGCCATGT +
Preference number: 5 (lower is better)
Translates to: ACPGQASRAGAARRW*GWARSAAGAWLQPC
Trigger: ACATGGCTGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCTGCCCGGGAAGCCTGGCCTGGGCACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414563.6
ENST00000517432.5
CDS CCA 90 bp GGTGGCCCATGTGCTCATCTTTCCGGGGCATCACGTCCGCGAGCGTaGCCTCGGCGAGGTTGGGCATGGAGGCGGGCGGTGTGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: GGPCAHLSGASRPRA*PRRGWAWRRAVWAG
Trigger: GCCCGCCCACACCGCCCGCCTCCATGCCCAACCTCGCCGAGGCCACGCTCGCGGACGTGATGCCCCGGAAAGATGAGCACATGGGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 90 bp CCGGCGCCGGCTTCCTCGGGAGCCACTTCTGCGGCGCGGCCAGGTTaGGTCCACTCCTTCCTCCGGCAGCGGATCCTCCCAGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PAPASSGATSAARPG*VHSFLRQRILPGES
Trigger: GCTCTCTCCTGGGAGGATCCGCTGCCGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAGGAAGCCGGCGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS GCA 90 bp GGGGGCGAGGGCGCCTCATCGGGCGTCAGGAACTGGTGGCCCATGTaGTCATCTTTCCGGGGCATCACGTCCGCGAGCGTGGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: GGEGASSGVRNWWPM*SSFRGITSASVASA
Trigger: CGCCGAGGCCACGCTCGCGGACGTGATGCCCCGGAAAGATGAGCACATGGGCCACCAGTTCCTGACGCCCGATGAGGCGCCCTCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 90 bp GCTTCACCAGGCCGCGCACAGAGTCCTCATGCAGGGAGTCCTGGCTaGCCAGGCCCAGCACGTGCATGGTGCGGCTGTGCGCCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: ASPGRAQSPHAGSPG*PGPARAWCGCAPGG
Trigger: GCCCCCTGGCGCACAGCCGCACCATGCACGTGCTGGGCCTGGCCAGCCAGGACTCCCTGCATGAGGACTCTGTGCGCGGCCTGGTGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS GCA 90 bp TTCCCGGGCAGGTGCAGCTCGTCGCTGGTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCAGCCATGTCACTCTGTGACTGCGTG +
Preference number: 5 (lower is better)
Translates to: FPGRCSSSLVRLGSL*SRGVAAAMSLCDCV
Trigger: CACGCAGTCACAGAGTGACATGGCTGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCTGCCCGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414563.6
ENST00000517432.5
CDS-3UTR CAA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGGCGGCGAGGGCTCCCTaGCTCCCTCCTACCCGGAGG +
Preference number: 5 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGAARAP*LPPTRR
Trigger: CCTCCGGGTAGGAGGGAGCAAGGGAGCCCTCGCCGC...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTGCGGCGCGGCCAGGTaGGGTCCACTCCTTCCTCCG +
Preference number: 5 (lower is better)
Translates to: ELRMDWATRGTGVRAKPDCGAAR*GPLLPP
Trigger: CGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCA...ATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp CAGCATCCGGGGCCAGCCACCCTGTGCCATCCTAAGTGGTCTCTGTACCCCAGATGCGGCGCGGCCAGGTaGGGTCCACTCCTTCCTCCG +
Preference number: 5 (lower is better)
Translates to: QHPGPATLCHPKWSLYPRCGAAR*GPLLPP
Trigger: CGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCA...TCTGGGGTACAGAGACCACTTAGGATGGCACAGGGTGGCTGGCCCCGGATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS GCA 90 bp TGTGGGACTCAGTGGCAGGGGGTGAGTGGCCACCGTGTCCCCATGTaGCCCACTATGGGCGACACCTGGGAGGGTGAAGAGTGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: CGTQWQGVSGHRVPM*PTMGDTWEGEEWLG
Trigger: GCCAAGCCACTCTTCACCCTCCCAGGTGTCGCCCATAGTGGGGCACATGGGGACACGGTGGCCACTCACCCCCTGCCACTGAGTCCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS-3UTR CAA 90 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAGCGGCGAGGGCTCCCTaGCTCCCTCCTACCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SQGRADTLRFHPWRVTKRAARAP*LPPTRR
Trigger: CCTCCGGGTAGGAGGGAGCAAGGGAGCCCTCGCCGC...TCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS TCA 90 bp CGGCGGCTTCATCAGGCGTGGCTCGTGGGAGGACTCCGGGGTCGCTaGAGCTGGTGCGGAGCAGGGTCCCCATCACAAAGAAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: RRLHQAWLVGGLRGR*SWCGAGSPSQRRTG
Trigger: TCCTGTTCTTCTTTGTGATGGGGACCCTGCTCCGCACCAGCTTCAGCGACCCCGGAGTCCTCCCACGAGCCACGCCTGATGAAGCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359775.10
ENST00000414563.6
ENST00000518214.5
ENST00000523468.5
CDS CCA 90 bp GCTATGGTGTCCCTGTGGCATCTGACCACAGGCCCAGCTGCACTGTaGGACTCAGTGGCAGGGGGTGAGTGGCCACCGTGTCCCCATGTG +
Preference number: 5 (lower is better)
Translates to: AMVSLWHLTTGPAAL*DSVAGGEWPPCPHV
Trigger: CACATGGGGACACGGTGGCCACTCACCCCCTGCCACTGAGTCCCACAGTGCAGCTGGGCCTGTGGTCAGATGCCACAGGGACACCATAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 90 bp ATCTATTTGCCTTTCCAGATCGGCGGCTTCATCAGGCGTGGCTCGTaGGAGGACTCCGGGGTCGCTGAAGCTGGTGCGGAGCAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: IYLPFQIGGFIRRGS*EDSGVAEAGAEQGP
Trigger: GGGACCCTGCTCCGCACCAGCTTCAGCGACCCCGGAGTCCTCCCACGAGCCACGCCTGATGAAGCCGCCGATCTGGAAAGGCAAATAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359775.10
ENST00000414563.6
ENST00000518214.5
ENST00000523468.5
CDS-3UTR CAA 90 bp AATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGTGGCCTCGGCGAGGTaGGGCATGGAGGCGGGCGGT +
Preference number: 5 (lower is better)
Translates to: NCSLATSVRSLPCVCHKGVASAR*GMEAGG
Trigger: ACCGCCCGCCTCCATGCCCAACCTCGCCGAGGCCAC...GCCCTTGTGACAGACACACGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCAGCACAGACACTTGTTaGCAAGGCTCAGCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAASTDTC*QGSARR
Trigger: GCGCCGGGCTGAGCCTTGCAAACAAGTGTCTGTGCT...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS-3UTR CAA 90 bp GGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCTGTGAGCGTGTGCGGTaGTGTAAGGAGGGCACTGCC +
Preference number: 5 (lower is better)
Translates to: GAVISTVALAGKVAVGHTCERVR*CKEGTA
Trigger: GGCAGTGCCCTCCTTACACAACCGCACACGCTCACA...GGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS TCA 90 bp CCACCGTGTCCCCATGTGCCCCACTATGGGCGACACCTGGGAGGGTaGAGAGTGGCTTGGCTCCCTATTCTTCCCAAGGTCCCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: PPCPHVPHYGRHLGG*RVAWLPILPKVPFP
Trigger: AGGGAAAGGGACCTTGGGAAGAATAGGGAGCCAAGCCACTCTTCACCCTCCCAGGTGTCGCCCATAGTGGGGCACATGGGGACACGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 90 bp GTCCCCATGTGCCCCACTATGGGCGACACCTGGGAGGGTGAAGAGTaGCTTGGCTCCCTATTCTTCCCAAGGTCCCTTTCCCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: VPMCPTMGDTWEGEE*LGSLFFPRSLSLCA
Trigger: GGCACAGAGGGAAAGGGACCTTGGGAAGAATAGGGAGCCAAGCCACTCTTCACCCTCCCAGGTGTCGCCCATAGTGGGGCACATGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS-3UTR CAA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGATCTCCACCGTGGCATaGGCTGGGAAAGTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGISTVA*AGKVAV
Trigger: CACAGCGACTTTCCCAGCCAATGCCACGGTGGAGAT...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GCTTTCCAGGGGAATGAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGGGCTCGGCGACAACTTaGCCGAGGACACCCAGGTTA +
Preference number: 5 (lower is better)
Translates to: AFQGNELRMDWATRGTGVGSATT*PRTPRL
Trigger: TAACCTGGGTGTCCTCGGCAAAGTTGTCGCCGAGCC...CACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTCATTCCCCTGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGTTGATGATGACTTCTTaGGTTCTGGGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGLMMTS*VLGGGR
Trigger: CCGCCCGCCTCCCAGAACCAAAGAAGTCATCATCAA...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGTGGCCTCGGCGAGGTaGGGCATGGAGGCGGGCGGT +
Preference number: 5 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGVASAR*GMEAGG
Trigger: ACCGCCCGCCTCCATGCCCAACCTCGCCGAGGCCAC...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGGGCTCGGCGACAACTTaGCCGAGGACACCCAGGTTA +
Preference number: 5 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQGSATT*PRTPRL
Trigger: TAACCTGGGTGTCCTCGGCAAAGTTGTCGCCGAGCC...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp AGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATTCGCGGAGAAAGCATGTCTCCTaGGACATGCCATGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: RMDWATRGTGVRAKPDSRRKHVS*DMPCGL
Trigger: GAGGCCACATGGCATGTCCAAGGAGACATGCTTTCT...CCGCGAATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS GCA 90 bp CATCATCCGGCCCTCGTGCACCAAGGAAATGACACACTCTACGGGTaGTATGGTGTCCCTGTGGCATCTGACCACAGGCCCAGCTGCACT +
Preference number: 5 (lower is better)
Translates to: HHPALVHQGNDTLYG*YGVPVASDHRPSCT
Trigger: AGTGCAGCTGGGCCTGTGGTCAGATGCCACAGGGACACCATAGCACCCGTAGAGTGTGTCATTTCCTTGGTGCACGAGGGCCGGATGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 90 bp CCTGTGCCCTTCCTGAAGCATCACATGCCAAGCCAGATAGGGTGGTaGGGTCGTGTCGTGGGGGTCACTGATGAGGGGGTGTCAAACAAG +
Preference number: 5 (lower is better)
Translates to: PVPFLKHHMPSQIGW*GRVVGVTDEGVSNK
Trigger: CTTGTTTGACACCCCCTCATCAGTGACCCCCACGACACGACCCCACCACCCTATCTGGCTTGGCATGTGATGCTTCAGGAAGGGCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS GCA 90 bp AGAGTGGCTTGGCTCCCTATTCTTCCCAAGGTCCCTTTCCCTCTGTaGCCACGGCCCATGTGTCTGAGTAGTGGGACACAGTGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: RVAWLPILPKVPFPL*PRPMCLSSGTQCVG
Trigger: TCCCACACACTGTGTCCCACTACTCAGACACATGGGCCGTGGGCACAGAGGGAAAGGGACCTTGGGAAGAATAGGGAGCCAAGCCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 90 bp CTGCCAGCCCCAAAGGGCACAGACGCAAGTGCCTGTGCGGCCATGTaGAGCAAACACAGCCTTGAGGCAGATGAGGGACCAAAAGAAATG +
Preference number: 5 (lower is better)
Translates to: LPAPKGTDASACAAM*SKHSLEADEGPKEM
Trigger: CATTTCTTTTGGTCCCTCATCTGCCTCAAGGCTGTGTTTGCTCCACATGGCCGCACAGGCACTTGCGTCTGTGCCCTTTGGGGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 90 bp TGCACCAAGGAAATGACACACTCTACGGGTGCTATGGTGTCCCTGTaGCATCTGACCACAGGCCCAGCTGCACTGTGGGACTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: CTKEMTHSTGAMVSL*HLTTGPAALWDSVA
Trigger: TGCCACTGAGTCCCACAGTGCAGCTGGGCCTGTGGTCAGATGCCACAGGGACACCATAGCACCCGTAGAGTGTGTCATTTCCTTGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS-3UTR CAA 90 bp GCTGCTGGCTGCGGCGTGTCGGGCTGGATGTACCCTCTTCTGTCGATCAGGCTTGTTTGCGATATCTATTaGCCTTTCCAGATCGGCGGC +
Preference number: 5 (lower is better)
Translates to: AAGCGVSGWMYPLLSIRLVCDIY*PFQIGG
Trigger: GCCGCCGATCTGGAAAGGCAAATAGATATCGCAAAC...AAGCCTGATCGACAGAAGAGGGTACATCCAGCCCGACACGCCGCAGCCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CAA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCTGGAACGAGCATCTTTaGGTTGGGCATAACGCAACT +
Preference number: 5 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAAWNEHL*VGHNAT
Trigger: AGTTGCGTTATGCCCAACCAAAAGATGCTCGTTCCA...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GGAGTAGCCCGCCAGGCTGTGCCCTTCAAAGTCTCTGACCAGTTCTGGTTCCAGGGTGGGGACATGGCATaGTCCTCACAGGCTGAAATC +
Preference number: 5 (lower is better)
Translates to: GVARQAVPFKVSDQFWFQGGDMA*SSQAEI
Trigger: GATTTCAGCCTGTGAGGACAATGCCATGTCCCCACC...CTGGAACCAGAACTGGTCAGAGACTTTGAAGGGCACAGCCTGGCGGGCTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GGCTGGATGTACCCTCTTCTGTCGATCAGGCTTGGTGAGATGGGCCCACACAGGCTGAATGCACTGGTCTaGGTCGCACATGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: GWMYPLLSIRLGEMGPHRLNALV*VAHVTL
Trigger: CAGAGTGACATGTGCGACCAAGACCAGTGCATTCAG...CCTGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAAGAGGGTACATCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CAA 90 bp GTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCCTCCGGAAAGCAGCACTTCCTaGGAAATAGCAACACCACTG +
Preference number: 5 (lower is better)
Translates to: VISTVALAGKVAVGHTPPESSTS*EIATPL
Trigger: CAGTGGTGTTGCTATTTCCAAGGAAGTGCTGCTTTC...CGGAGGGGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp CAGACCTGGGGCTGTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGGAGGACGTCATTTTATaGGCTGTCCACGGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: QTWGCHLHRGIGWESRCGEDVIL*AVHGKF
Trigger: AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTC...CCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGACAGCCCCAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGCCGTTACAGAAGAACTaGTTTCTTCCCGGGAACACC +
Preference number: 5 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKPLQKN*FLPGNT
Trigger: GGTGTTCCCGGGAAGAAACAAGTTCTTCTGTAACGG...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCGTTTGCGATATCTATTaGCCTTTCCAGATCGGCGGC +
Preference number: 5 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAAVCDIY*PFQIGG
Trigger: GCCGCCGATCTGGAAAGGCAAATAGATATCGCAAAC...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GAGCTGAGAATGGACTGGGCCACACGTGGGACCGGAGTGAGGGCTAAGCCGGATGCTCATAAAATGGGTTaGCTCCTCACTTGGAACCAC +
Preference number: 5 (lower is better)
Translates to: ELRMDWATRGTGVRAKPDAHKMG*LLTWNH
Trigger: GTGGTTCCAAGTGAGGAGCAAACCCATTTTATGAGC...ATCCGGCTTAGCCCTCACTCCGGTCCCACGTGTGGCCCAGTCCATTCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GTCATCTCCACCGTGGCATTGGCTGGGAAAGTCGCTGTGGGACACACCCCTCCGGTTTCACCAGGCATCTaGAAACATCGAGGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: VISTVALAGKVAVGHTPPVSPGI*KHRGQV
Trigger: TACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAAC...CGGAGGGGTGTGTCCCACAGCGACTTTCCCAGCCAATGCCACGGTGGAGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS TCA 90 bp TCACAAAGAAGAACAGGATGCCAGCGACTGCAGGGATGGCAGGGGTaGTTTTCACCGCCAGGTACGGACAGTCGAAGGCGAAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: SQRRTGCQRLQGWQG*FSPPGTDSRRRRRV
Trigger: GACTCTTCTTCGCCTTCGACTGTCCGTACCTGGCGGTGAAAATCACCCCTGCCATCCCTGCAGTCGCTGGCATCCTGTTCTTCTTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp ACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAGCGATTTTCTTCTTCTaGTGGGGCGACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: TVGVVAHNISTRDLIERPAIFFF*WGDSMG
Trigger: CCCCATGGAGTCGCCCCACAAGAAGAAGAAAATCGC...TGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCTTCACGGTCTGGCCATaGATGATGACTTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAAFTVWP*MMTSLV
Trigger: AACCAAAGAAGTCATCATCAATGGCCAGACCGTGAA...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGGGGGGCCGGAAAATCTaGCAGGTGAAACAGTATTTA +
Preference number: 5 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQGGRKI*QVKQYL
Trigger: TAAATACTGTTTCACCTGCAAGATTTTCCGGCCCCC...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTGGGGGCCGGAAAATCTaGCAGGTGAAACAGTATTTA +
Preference number: 5 (lower is better)
Translates to: ASEAFRVSVTRAGRHTPIGGRKI*QVKQYL
Trigger: TAAATACTGTTTCACCTGCAAGATTTTCCGGCCCCC...AATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGTCCCAGTTCAAAGATTaGACTTTTGGTTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKSQFKD*TFGCLG
Trigger: CCCCAGACAACCAAAAGTCAAATCTTTGAACTGGGA...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCGAAAGCAGCACTTCCTaGGAAATAGCAACACCACTG +
Preference number: 5 (lower is better)
Translates to: DCGGCGTQYLNTRPHRAAESSTS*EIATPL
Trigger: CAGTGGTGTTGCTATTTCCAAGGAAGTGCTGCTTTC...GGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GCGTCAGAAGCCTTCCGTGTGTCTGTCACAAGGGCGGGCAGACACACTCCGATTCTGAACTGGTGCCGTTaGCGATATCTATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: ASEAFRVSVTRAGRHTPILNWCR*RYLFAF
Trigger: AAAGGCAAATAGATATCGCAAACGGCACCAGTTCAG...AATCGGAGTGTGTCTGCCCGCCCTTGTGACAGACACACGGAAGGCTTCTGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp TCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGACCCATGAATTACACATaGCAGGTGGGTACAAGTAGT +
Preference number: 5 (lower is better)
Translates to: SQGRADTLRFHPWRVTKRPMNYT*QVGTSS
Trigger: ACTACTTGTACCCACCTGCAATGTGTAATTCATGGG...TCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGAAAGCAGCCTCATTTTTCTTGCTGTaGAGTCAGACAAGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: AGRHTPIPPLEGHQKKAASFFLL*SQTRRP
Trigger: AGGCCTTCTTGTCTGACTCAACAGCAAGAAAAATGA...GGCTGCTTTCTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp CGCAGATCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTAGAGACCTGAGACCCTaGGGGAGTAGCCCGCCAGGC +
Preference number: 5 (lower is better)
Translates to: RRSKITEDVILLAVHGKFRDLRP*GSSPPG
Trigger: GCCTGGCGGGCTACTCCCCAAGGGTCTCAGGTCTCT...AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGATCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp ACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGCCGCCCTCTGCAGCCTACATGTGTTCACCATaGTTTGGATTTAGAGCTTTG +
Preference number: 5 (lower is better)
Translates to: TEGEVTPDTTEPQPPSAAYMCSP*FGFRAL
Trigger: CAAAGCTCTAAATCCAAACAATGGTGAACACATGTA...GGCTGCAGAGGGCGGCTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGTCTCTATTTCCATTGTaGTCAAAGCACTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQSLFPL*SKHSGW
Trigger: CCAACCTGAGTGCTTTGACAACAATGGAAATAGAGA...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GTCACAAGGGCGGGCAGACACACTCCGATTCCACCCCTGGAGGGTCACCAAAAGATTAGTCTCAGTTCGTaGCACTGTCTTCCAACAAAA +
Preference number: 5 (lower is better)
Translates to: VTRAGRHTPIPPLEGHQKISLSS*HCLPTK
Trigger: TTTTGTTGGAAGACAGTGCAACGAACTGAGACTAAT...CTTTTGGTGACCCTCCAGGGGTGGAATCGGAGTGTGTCTGCCCGCCCTTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCGCGATTTTCTTCTTCTaGTGGGGCGACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLAIFFF*WGDSMG
Trigger: CCCCATGGAGTCGCCCCACAAGAAGAAGAAAATCGC...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp ACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAGTTGCACTTCTGGGATaGAGTGACACGTTAACACAG +
Preference number: 5 (lower is better)
Translates to: TVGVVAHNISTRDLIERPVALLG*SDTLTQ
Trigger: CTGTGTTAACGTGTCACTCAATCCCAGAAGTGCAAC...TGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCGTTGTGGAAGCTCCTTaGTGGGGCTGTCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLVVEAP*WGCHFG
Trigger: CCCAAAGTGACAGCCCCACAAAGGAGCTTCCACAAC...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGCAAAGACTCCTCCCTaGTGCCATTCTGGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGAKTPP*CHSGPE
Trigger: TTCTGGCCCAGAATGGCACAAGGGAGGAGTCTTTGC...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TCATCGAGCGGCCAAACAGAAGGTGAAGTGACACCCGACACGACGGAACCCCAGTCCATGCCAAAACGTTaGACTGTGAAATATCAACCC +
Preference number: 5 (lower is better)
Translates to: SSSGQTEGEVTPDTTEPQSMPKR*TVKYQP
Trigger: GGGTTGATATTTCACAGTCAAACGTTTTGGCATGGA...CTGGGGTTCCGTCGTGTCGGGTGTCACTTCACCTTCTGTTTGGCCGCTCGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTTTGATGATGACTTCTTaGGTTCTGGGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: AKRIWCSECTGLGRTCHSLMMTS*VLGGGR
Trigger: CCGCCCGCCTCCCAGAACCAAAGAAGTCATCATCAA...AGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CAA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGTTTGCGATATCTATTaGCCTTTCCAGATCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRVCDIY*PFQIGG
Trigger: GCCGCCGATCTGGAAAGGCAAATAGATATCGCAAAC...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp CTGTGGGGGTTGTGGCACACAATATCTCAACACGAGACCTCATCGAGCGGCCAACAGCTGCAAATTCGGTaGCTCCAGAAACCATCTAAT +
Preference number: 5 (lower is better)
Translates to: LWGLWHTISQHETSSSGQQLQIR*LQKPSN
Trigger: ATTAGATGGTTTCTGGAGCAACCGAATTTGCAGCTG...TTGGCCGCTCGATGAGGTCTCGTGTTGAGATATTGTGTGCCACAACCCCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp ATCAGGCTTGGTGAGATGGGCCCACACAGGGCAACACAGCAGTTGGTAAAGATAGGGGGCCGGAAAATCTaGCAGGTGAAACAGTATTTA +
Preference number: 5 (lower is better)
Translates to: IRLGEMGPHRATQQLVKIGGRKI*QVKQYL
Trigger: TAAATACTGTTTCACCTGCAAGATTTTCCGGCCCCC...TATCTTTACCAACTGCTGTGTTGCCCTGTGTGGGCCCATCTCACCAAGCCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CAA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAATCTCCACCGTGGCATaGGCTGGGAAAGTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: GGSPKESSHFSISIVVKAISTVA*AGKVAV
Trigger: CACAGCGACTTTCCCAGCCAATGCCACGGTGGAGAT...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAAGATTTGACTTTTGGTaGTCTGGGGACCATTCCTCG +
Preference number: 5 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRRFDFW*SGDHSS
Trigger: CGAGGAATGGTCCCCAGACAACCAAAAGTCAAATCT...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAAGCAAGGCCATGGCTTaGAACTTGAGTAGCTTTAGC +
Preference number: 5 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRSKAMA*NLSSFS
Trigger: GCTAAAGCTACTCAAGTTCAAAGCCATGGCCTTGCT...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp AACTGTTGCACGGCAAACTGCAAACGTAGAGCAAATTCCACTAAGATGGTGTCATTCTGTCGATCAGGCTaGGTGAGATGGGCCCACACA +
Preference number: 5 (lower is better)
Translates to: NCCTANCKRRANSTKMVSFCRSG*VRWAHT
Trigger: TGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAA...TGACACCATCTTAGTGGAATTTGCTCTACGTTTGCAGTTTGCCGTGCAACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAATTCTGTCGATCAGGCTaGGTGAGATGGGCCCACACA +
Preference number: 5 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGEFCRSG*VRWAHT
Trigger: TGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAA...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp AGCATAACACATAAGTGCAATTGCAGTCTGGCCACAAGCGTCAGAAGCCTTCCGGAGGACGTCATTTTATaGGCTGTCCACGGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: SITHKCNCSLATSVRSLPEDVIL*AVHGKF
Trigger: AAACTTCCCGTGGACAGCCAATAAAATGACGTCCTC...CGGAAGGCTTCTGACGCTTGTGGCCAGACTGCAATTGCACTTATGTGTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAACACAGCACAGACACTaGTTTGCAAGGCTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: GGSPKESSHFSISIVVKATQHRH*FARLSP
Trigger: CGGGCTGAGCCTTGCAAACAAGTGTCTGTGCTGTGT...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS CCA 90 bp GGAAAAGGCGGGTGTCCATTGTCCTCTTGCAAGCCCACCAAGTCATaGCTCTCAAGCACATATTACACATTTGTGTCACGTTTGGATGAA +
Preference number: 5 (lower is better)
Translates to: GKGGCPLSSCKPTKS*LSSTYYTFVSRLDE
Trigger: TTCATCCAAACGTGACACAAATGTGTAATATGTGCTTGAGAGCCATGACTTGGTGGGCTTGCAAGAGGACAATGGACACCCGCCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS-3UTR CAA 90 bp TCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTCATCACTTGATGATGACTTCTTaGGTTCTGGGAGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: SKITEDVILLAVHGKFHHLMMTS*VLGGGR
Trigger: CCGCCCGCCTCCCAGAACCAAAGAAGTCATCATCAA...GTGATGAAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp GGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATTTCACGGTCTGGCCATaGATGATGACTTCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GSFITHGGEDCGGCGTQYFTVWP*MMTSLV
Trigger: AACCAAAGAAGTCATCATCAATGGCCAGACCGTGAA...ATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAAAGACGGTTTGGGAAGTaGTGGAAGCTCCTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGERRFGK*WKLLCG
Trigger: CCCACAAAGGAGCTTCCACAACTTCCCAAACCGTCT...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp AAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAGTTACAGAGAAGCGTTaGCTGCAGGGTAGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: KKAATSLFPLLSKHSGWGVTEKR*LQGSQV
Trigger: CACCTGACTACCCTGCAGCAAACGCTTCTCTGTAAC...TCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAACACGAGCTATTTATCTAGTTTaGTGGCAGCTGCAAATTCGG +
Preference number: 5 (lower is better)
Translates to: SHTEVKTVGVVAHNISTRAIYLV*WQLQIR
Trigger: CCGAATTTGCAGCTGCCACAAAACTAGATAAATAGC...TCGTGTTGAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTCATCACCTGAATGCACTGGTCTaGGTCGCACATGTCACTCTG +
Preference number: 5 (lower is better)
Translates to: SKITEDVILLAVHGKFHHLNALV*VAHVTL
Trigger: CAGAGTGACATGTGCGACCAAGACCAGTGCATTCAG...GTGATGAAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TTTTGGTTGGGCATAACGCAACTGCTGGGCCAATTTCTGCAGAACGGAGTGACATCTCTATTTCCATTGTaGTCAAAGCACTCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: FWLGITQLLGQFLQNGVTSLFPL*SKHSGW
Trigger: CCAACCTGAGTGCTTTGACAACAATGGAAATAGAGA...TGTCACTCCGTTCTGCAGAAATTGGCCCAGCAGTTGCGTTATGCCCAACCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCACCGTTACAGAAGAACTaGTTTCTTCCCGGGAACACC +
Preference number: 5 (lower is better)
Translates to: GFTRHLETSRASKRVVHSPLQKN*FLPGNT
Trigger: GGTGTTCCCGGGAAGAAACAAGTTCTTCTGTAACGG...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTCTGAACTGGTGCCGTTaGCGATATCTATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: AKRIWCSECTGLGRTCHSLNWCR*RYLFAF
Trigger: AAAGGCAAATAGATATCGCAAACGGCACCAGTTCAG...AGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CAA 90 bp AAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAACTTCCGATCAACTGTaGCACGGCAAACTGCAAACG +
Preference number: 5 (lower is better)
Translates to: KKAATSLFPLLSKHSGWGTSDQL*HGKLQT
Trigger: CGTTTGCAGTTTGCCGTGCAACAGTTGATCGGAAGT...TCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp AAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAACGAGCATCTTTTGGTaGGGCATAACGCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: KKAATSLFPLLSKHSGWGTSIFW*GITQLL
Trigger: CAGCAGTTGCGTTATGCCCAACCAAAAGATGCTCGT...TCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TTTTATTGGCTGTCCACGGGAAGTTTCATCACACACGGAGGTGAAGACTGTGGGATTAGTCTCAGTTCGTaGCACTGTCTTCCAACAAAA +
Preference number: 5 (lower is better)
Translates to: FYWLSTGSFITHGGEDCGISLSS*HCLPTK
Trigger: TTTTGTTGGAAGACAGTGCAACGAACTGAGACTAAT...CCCACAGTCTTCACCTCCGTGTGTGATGAAACTTCCCGTGGACAGCCAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp TTACCTCTTTTATTTGACCAGGATCCTTTAATGTCCTCATTTGTTGTCTGGTTGTTCTGTCGATCAGGCTaGGTGAGATGGGCCCACACA +
Preference number: 5 (lower is better)
Translates to: LPLLFDQDPLMSSFVVWLFCRSG*VRWAHT
Trigger: TGTGTGGGCCCATCTCACCAAGCCTGATCGACAGAA...CAACCAGACAACAAATGAGGACATTAAAGGATCCTGGTCAAATAAAAGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518214.5
CDS-3UTR CAA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCAATCACTTGGGTTACTaGTATCATTGGTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLNHLGY*YHWSMC
Trigger: ACACATTGACCAATGATACAAGTAACCCAAGTGATT...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp AGTTTCATCACACACGGAGGTGAAGACTGTGGGGGTTGTGGCACACAATATCTCTGTGTTTGTGTGTGTTaGATAATGGTCCAAGCTTTA +
Preference number: 5 (lower is better)
Translates to: SFITHGGEDCGGCGTQYLCVCVC*IMVQAL
Trigger: TAAAGCTTGGACCATTATCAAACACACACAAACACA...GAGATATTGTGTGCCACAACCCCCACAGTCTTCACCTCCGTGTGTGATGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GGTTTCACCAGGCATCTTGAAACATCGAGGGCAAGTAAGAGAGTTGTTCATTCAGAACTCAATGTATTCTaGTGGATGGATGAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GFTRHLETSRASKRVVHSELNVF*WMDEGQ
Trigger: CTGCCCTTCATCCATCCACAAGAATACATTGAGTTC...TGAATGAACAACTCTCTTACTTGCCCTCGATGTTTCAAGATGCCTGGTGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp TCCAAAATAACAGAGGACGTCATTTTATTGGCTGTCCACGGGAAGTTTCATCACCTGAACTGGTGCCGTTaGCGATATCTATTTGCCTTT +
Preference number: 5 (lower is better)
Translates to: SKITEDVILLAVHGKFHHLNWCR*RYLFAF
Trigger: AAAGGCAAATAGATATCGCAAACGGCACCAGTTCAG...GTGATGAAACTTCCCGTGGACAGCCAATAAAATGACGTCCTCTGTTATTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS-3UTR CAA 90 bp AGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGGGGAAGGGTTACTTGTATCATaGGTCAATGTGTCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: RKQPLLYFHCCQSTQVGEGLLVS*VNVSCL
Trigger: AAGACAAGACACATTGACCAATGATACAAGTAACCC...TTCCCCAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp GGAGGGTCACCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCAAAGTTAATCTCTCTCTaGACCCTGAATAGCCTTGAT +
Preference number: 5 (lower is better)
Translates to: GGSPKESSHFSISIVVKAKLISL*TLNSLD
Trigger: ATCAAGGCTATTCAGGGTCAAGAGAGAGATTAACTT...TGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGGTGACCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS-3UTR CAA 90 bp CCAAAAGAAAGCAGCCACTTCTCTATTTCCATTGTTGTCAAAGCACTCAGGTTGAGAATGAGTGTGTGTTaGTGTGTGTTTGATAATGGT +
Preference number: 5 (lower is better)
Translates to: PKESSHFSISIVVKALRLRMSVC*CVFDNG
Trigger: ACCATTATCAAACACACACAAACACACACTCATTCT...CAACCTGAGTGCTTTGACAACAATGGAAATAGAGAAGTGGCTGCTTTCTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359775.10
CDS CCA 90 bp CCAAGTCATGGCTCTCAAGCACATATTACACATTTGTGTCACGTTTaGATGAAAGATTATAGTCAGAAAGAATGGCAACTAGGATTGAAA +
Preference number: 5 (lower is better)
Translates to: PSHGSQAHITHLCHV*MKDYSQKEWQLGLK
Trigger: TTTCAATCCTAGTTGCCATTCTTTCTGACTATAATCTTTCATCCAAACGTGACACAAATGTGTAATATGTGCTTGAGAGCCATGACTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS CCA 90 bp TACATACGTAATCTGATTTCGCCAGCATACTTACGAAGAATGACGTaGGTGATAACGAATGCAAATATAAAGACTGTCAGAAAAGACAGA +
Preference number: 5 (lower is better)
Translates to: YIRNLISPAYLRRMT*VITNANIKTVRKDR
Trigger: TCTGTCTTTTCTGACAGTCTTTATATTTGCATTCGTTATCACCCACGTCATTCTTCGTAAGTATGCTGGCGAAATCAGATTACGTATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523468.5
CDS CCA 90 bp ACACATTTGTGTCACGTTTGGATGAAAGATTATAGTCAGAAAGAATaGCAACTAGGATTGAAAGTACCTATGAAAATTTGGGATGTTCCA +
Preference number: 5 (lower is better)
Translates to: THLCHVWMKDYSQKE*QLGLKVPMKIWDVP
Trigger: TGGAACATCCCAAATTTTCATAGGTACTTTCAATCCTAGTTGCCATTCTTTCTGACTATAATCTTTCATCCAAACGTGACACAAATGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS GCA 72 bp AGCCGGGGCGCCGCTCGCACCGCGACCCGGTGTCGCTaGGCCTGGCAGCCTAGTCGAATCCGCGGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: SRGAARTATRCR*AWQPSRIRGPR
Trigger: GCGGGGGCCGCGGATTCGACTAGGCTGCCAGGCGCAGCGACACCGGGTCGCGGTGCGAGCGGCGCCCCGGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS CAA 90 bp GCCCCGGCGCGAGGAGGGCCGCGGGGACACAGCACAGACACTTGTTaGCAAGGCTCAGCCCGGCGCGCGCGCGGCGCTCCGAGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: APARGGPRGHSTDTC*QGSARRARGAPSGS
Trigger: GGACCCACTCGGAGCGCCGCGCGCGCGCCGGGCTGAGCCTTGCAAACAAGTGTCTGTGCTGTGTCCCCGCGGCCCTCCTCGCGCCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS GCA 72 bp GGCGGCCCCGGCGCCGGCTTCCTCGGGAGCCACTTCTaGGGCGCGGCCAGGTTGGGTCCACTCCTTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GGPGAGFLGSHF*GAARLGPLLPP
Trigger: CGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAGGAAGCCGGCGCCGGGGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS CCA 72 bp GGCTGTGCGCCAGGGGGCTGCCCGCCGCCAGTAGCCTaGGGGGCGAGGGCGCCTCATCGGGCGTCAGGAACT +
Preference number: 6 (lower is better)
Translates to: GCAPGGCPPPVA*GARAPHRASGT
Trigger: AGTTCCTGACGCCCGATGAGGCGCCCTCGCCCCCCAGGCTACTGGCGGCGGGCAGCCCCCTGGCGCACAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CAA 72 bp GGCGCGAGGAGGGCCGCGGGGACACAGCACAGACACTaGTTTGCAAGGCTCAGCCCGGCGCGCGCGCGGCGC +
Preference number: 6 (lower is better)
Translates to: GARRAAGTQHRH*FARLSPARARR
Trigger: GCGCCGCGCGCGCGCCGGGCTGAGCCTTGCAAACAAGTGTCTGTGCTGTGTCCCCGCGGCCCTCCTCGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS CAA 72 bp CGAGGAGGGCCGCGGGGACACAGCACAGACACTTGTTaGCAAGGCTCAGCCCGGCGCGCGCGCGGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: RGGPRGHSTDTC*QGSARRARGAP
Trigger: CGGAGCGCCGCGCGCGCGCCGGGCTGAGCCTTGCAAACAAGTGTCTGTGCTGTGTCCCCGCGGCCCTCCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS CAA 90 bp CCCGGCGCCGGCTTCCTCGGGAGCCACTTCTGCGGCGCGGCCAGGTaGGGTCCACTCCTTCCTCCGGCAGCGGATCCTCCCAGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: PGAGFLGSHFCGAAR*GPLLPPAADPPRRE
Trigger: CTCTCTCCTGGGAGGATCCGCTGCCGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAGGAAGCCGGCGCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS GCA 72 bp GAGGAGGGCCGCGGGGACACAGCACAGACACTTGTTTaGAAGGCTCAGCCCGGCGCGCGCGCGGCGCTCCGA +
Preference number: 6 (lower is better)
Translates to: EEGRGDTAQTLV*KAQPGARAALR
Trigger: TCGGAGCGCCGCGCGCGCGCCGGGCTGAGCCTTGCAAACAAGTGTCTGTGCTGTGTCCCCGCGGCCCTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414563.6
CDS CAA 90 bp CGCGGCGCCGCGGCCCCTACACGGGCTCCCGGCTCGGCGACAACTTaGCCGAGGACACCCAGGTTAACCCTCCGGGGAGCCCAACTGTCA +
Preference number: 6 (lower is better)
Translates to: RGAAAPTRAPGSATT*PRTPRLTLRGAQLS
Trigger: TGACAGTTGGGCTCCCCGGAGGGTTAACCTGGGTGTCCTCGGCAAAGTTGTCGCCGAGCCGGGAGCCCGTGTAGGGGCCGCGGCGCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS CAA 72 bp GGCTTCCTCGGGAGCCACTTCTGCGGCGCGGCCAGGTaGGGTCCACTCCTTCCTCCGGCAGCGGATCCTCCC +
Preference number: 6 (lower is better)
Translates to: GFLGSHFCGAAR*GPLLPPAADPP
Trigger: GGGAGGATCCGCTGCCGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAGGAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS CAA 72 bp GCGGCCCCTACACGGGCTCCCGGCTCGGCGACAACTTaGCCGAGGACACCCAGGTTAACCCTCCGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: AAPTRAPGSATT*PRTPRLTLRGA
Trigger: GGCTCCCCGGAGGGTTAACCTGGGTGTCCTCGGCAAAGTTGTCGCCGAGCCGGGAGCCCGTGTAGGGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS CCA 72 bp TGTGCTCATCTTTCCGGGGCATCACGTCCGCGAGCGTaGCCTCGGCGAGGTTGGGCATGGAGGCGGGCGGTG +
Preference number: 6 (lower is better)
Translates to: CAHLSGASRPRA*PRRGWAWRRAV
Trigger: CACCGCCCGCCTCCATGCCCAACCTCGCCGAGGCCACGCTCGCGGACGTGATGCCCCGGAAAGATGAGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 72 bp GCTTCCTCGGGAGCCACTTCTGCGGCGCGGCCAGGTTaGGTCCACTCCTTCCTCCGGCAGCGGATCCTCCCA +
Preference number: 6 (lower is better)
Translates to: ASSGATSAARPG*VHSFLRQRILP
Trigger: TGGGAGGATCCGCTGCCGGAGGAAGGAGTGGACCCAACCTGGCCGCGCCGCAGAAGTGGCTCCCGAGGAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS GCA 72 bp GGCGCCTCATCGGGCGTCAGGAACTGGTGGCCCATGTaGTCATCTTTCCGGGGCATCACGTCCGCGAGCGTG +
Preference number: 6 (lower is better)
Translates to: GASSGVRNWWPM*SSFRGITSASV
Trigger: CACGCTCGCGGACGTGATGCCCCGGAAAGATGAGCACATGGGCCACCAGTTCCTGACGCCCGATGAGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS GCA 72 bp AGGTGCAGCTCGTCGCTGGTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCAGCCATGTCACTCTGT +
Preference number: 6 (lower is better)
Translates to: RCSSSLVRLGSL*SRGVAAAMSLC
Trigger: ACAGAGTGACATGGCTGCAGCCACGCCCCTGCTGCAGAGCGAGCCCAGCCTCACCAGCGACGAGCTGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414563.6
ENST00000517432.5
CDS CCA 72 bp CCTTTCCAGATCGGCGGCTTCATCAGGCGTGGCTCGTaGGAGGACTCCGGGGTCGCTGAAGCTGGTGCGGAG +
Preference number: 6 (lower is better)
Translates to: PFQIGGFIRRGS*EDSGVAEAGAE
Trigger: CTCCGCACCAGCTTCAGCGACCCCGGAGTCCTCCCACGAGCCACGCCTGATGAAGCCGCCGATCTGGAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359775.10
ENST00000414563.6
ENST00000518214.5
ENST00000523468.5
CDS TCA 72 bp CATCAGGCGTGGCTCGTGGGAGGACTCCGGGGTCGCTaGAGCTGGTGCGGAGCAGGGTCCCCATCACAAAGA +
Preference number: 6 (lower is better)
Translates to: HQAWLVGGLRGR*SWCGAGSPSQR
Trigger: TCTTTGTGATGGGGACCCTGCTCCGCACCAGCTTCAGCGACCCCGGAGTCCTCCCACGAGCCACGCCTGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359775.10
ENST00000414563.6
ENST00000518214.5
ENST00000523468.5
CDS GCA 72 bp AGCAGGGGCGTGGCTGCAGCCATGTCACTCTGTGACTaGGTGGCCCCGTACATGGTGATGCCATTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: SRGVAAAMSLCD*VAPYMVMPLEG
Trigger: ACCCTCCAATGGCATCACCATGTACGGGGCCACGCAGTCACAGAGTGACATGGCTGCAGCCACGCCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414563.6
ENST00000517432.5
CDS CCA 72 bp CATCTTAGGGTAGCGGTGCCAGGTCCCTCTGTGCTGTaGGAAGCCAGTGAGCCTCTGGGGACATCATCCGGC +
Preference number: 6 (lower is better)
Translates to: HLRVAVPGPSVL*EASEPLGTSSG
Trigger: GCCGGATGATGTCCCCAGAGGCTCACTGGCTTCCCACAGCACAGAGGGACCTGGCACCGCTACCCTAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CAA 90 bp CCATGTGCCCCACTATGGGCGACACCTGGGAGGGTGAAGAGTGGCTaGGCTCCCTATTCTTCCCAAGGTCCCTTTCCCTCTGTGCCCACG +
Preference number: 6 (lower is better)
Translates to: PCAPLWATPGRVKSG*APYSSQGPFPSVPT
Trigger: CGTGGGCACAGAGGGAAAGGGACCTTGGGAAGAATAGGGAGCCAAGCCACTCTTCACCCTCCCAGGTGTCGCCCATAGTGGGGCACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS TCA 72 bp CCCCATGTGCCCCACTATGGGCGACACCTGGGAGGGTaGAGAGTGGCTTGGCTCCCTATTCTTCCCAAGGTC +
Preference number: 6 (lower is better)
Translates to: PHVPHYGRHLGG*RVAWLPILPKV
Trigger: GACCTTGGGAAGAATAGGGAGCCAAGCCACTCTTCACCCTCCCAGGTGTCGCCCATAGTGGGGCACATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS TCA 72 bp CACACTCTACGGGTGCTATGGTGTCCCTGTGGCATCTaGCCACAGGCCCAGCTGCACTGTGGGACTCAGTGG +
Preference number: 6 (lower is better)
Translates to: HTLRVLWCPCGI*PQAQLHCGTQW
Trigger: CCACTGAGTCCCACAGTGCAGCTGGGCCTGTGGTCAGATGCCACAGGGACACCATAGCACCCGTAGAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 72 bp CAGGTCCCTCTGTGCTGTGGGAAGCCAGTGAGCCTCTaGGGACATCATCCGGCCCTCGTGCACCAAGGAAAT +
Preference number: 6 (lower is better)
Translates to: QVPLCCGKPVSL*GHHPALVHQGN
Trigger: ATTTCCTTGGTGCACGAGGGCCGGATGATGTCCCCAGAGGCTCACTGGCTTCCCACAGCACAGAGGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CAA 72 bp AACGTGAGCCTGAGCCCAGCCCACGCCATTTGTGGTTaGAGCACCGCGGCCTGGGAAGGAAGTGAAGCCGTT +
Preference number: 6 (lower is better)
Translates to: NVSLSPAHAICG*STAAWEGSEAV
Trigger: AACGGCTTCACTTCCTTCCCAGGCCGCGGTGCTCAAACCACAAATGGCGTGGGCTGGGCTCAGGCTCACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS TCA 72 bp AGAACAGGATGCCAGCGACTGCAGGGATGGCAGGGGTaGTTTTCACCGCCAGGTACGGACAGTCGAAGGCGA +
Preference number: 6 (lower is better)
Translates to: RTGCQRLQGWQG*FSPPGTDSRRR
Trigger: TCGCCTTCGACTGTCCGTACCTGGCGGTGAAAATCACCCCTGCCATCCCTGCAGTCGCTGGCATCCTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359775.10
ENST00000414563.6
CDS TCA 72 bp CTGGGGACATCATCCGGCCCTCGTGCACCAAGGAAATaGCACACTCTACGGGTGCTATGGTGTCCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: LGTSSGPRAPRK*HTLRVLWCPCG
Trigger: GCCACAGGGACACCATAGCACCCGTAGAGTGTGTCATTTCCTTGGTGCACGAGGGCCGGATGATGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS GCA 72 bp GCCCTCGTGCACCAAGGAAATGACACACTCTACGGGTaGTATGGTGTCCCTGTGGCATCTGACCACAGGCCC +
Preference number: 6 (lower is better)
Translates to: ALVHQGNDTLYG*YGVPVASDHRP
Trigger: GGGCCTGTGGTCAGATGCCACAGGGACACCATAGCACCCGTAGAGTGTGTCATTTCCTTGGTGCACGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 72 bp TTCCTGAAGCATCACATGCCAAGCCAGATAGGGTGGTaGGGTCGTGTCGTGGGGGTCACTGATGAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: FLKHHMPSQIGW*GRVVGVTDEGV
Trigger: CACCCCCTCATCAGTGACCCCCACGACACGACCCCACCACCCTATCTGGCTTGGCATGTGATGCTTCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 72 bp CCAAAGGGCACAGACGCAAGTGCCTGTGCGGCCATGTaGAGCAAACACAGCCTTGAGGCAGATGAGGGACCA +
Preference number: 6 (lower is better)
Translates to: PKGTDASACAAM*SKHSLEADEGP
Trigger: TGGTCCCTCATCTGCCTCAAGGCTGTGTTTGCTCCACATGGCCGCACAGGCACTTGCGTCTGTGCCCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 72 bp TGCCCCACTATGGGCGACACCTGGGAGGGTGAAGAGTaGCTTGGCTCCCTATTCTTCCCAAGGTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: CPTMGDTWEGEE*LGSLFFPRSLS
Trigger: GGAAAGGGACCTTGGGAAGAATAGGGAGCCAAGCCACTCTTCACCCTCCCAGGTGTCGCCCATAGTGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 72 bp AGAGGGTGCCCCTGTCTGCATCCTGCCCAGCTGATGTaGAAAAGGCGGGTGTCCATTGTCCTCTTGCAAGCC +
Preference number: 6 (lower is better)
Translates to: RGCPCLHPAQLM*KRRVSIVLLQA
Trigger: GGCTTGCAAGAGGACAATGGACACCCGCCTTTTCCACATCAGCTGGGCAGGATGCAGACAGGGGCACCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS CAA 90 bp TGTACTCCTAACGTGAGCCTGAGCCCAGCCCACGCCATTTGTGGTTaGAGCACCGCGGCCTGGGAAGGAAGTGAAGCCGTTGTGCAGATA +
Preference number: 6 (lower is better)
Translates to: CTPNVSLSPAHAICG*STAAWEGSEAVVQI
Trigger: TATCTGCACAACGGCTTCACTTCCTTCCCAGGCCGCGGTGCTCAAACCACAAATGGCGTGGGCTGGGCTCAGGCTCACGTTAGGAGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS CCA 72 bp GAAATGACACACTCTACGGGTGCTATGGTGTCCCTGTaGCATCTGACCACAGGCCCAGCTGCACTGTGGGAC +
Preference number: 6 (lower is better)
Translates to: EMTHSTGAMVSL*HLTTGPAALWD
Trigger: GTCCCACAGTGCAGCTGGGCCTGTGGTCAGATGCCACAGGGACACCATAGCACCCGTAGAGTGTGTCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CAA 72 bp CCACTATGGGCGACACCTGGGAGGGTGAAGAGTGGCTaGGCTCCCTATTCTTCCCAAGGTCCCTTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: PLWATPGRVKSG*APYSSQGPFPS
Trigger: AGAGGGAAAGGGACCTTGGGAAGAATAGGGAGCCAAGCCACTCTTCACCCTCCCAGGTGTCGCCCATAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS GCA 72 bp GGTGATCAAACCGTTCTACGCAGTTATCACAAAGGCTaGAATGGGAGGCGCGAGGGGGCCGGAAAATCTTGC +
Preference number: 6 (lower is better)
Translates to: GDQTVLRSYHKG*NGRREGAGKSC
Trigger: GCAAGATTTTCCGGCCCCCTCGCGCCTCCCATTGCAGCCTTTGTGATAACTGCGTAGAACGGTTTGATCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000518214.5
ENST00000523468.5
CDS CAA 72 bp CAGCTGATGTGGAAAAGGCGGGTGTCCATTGTCCTCTaGCAAGCCCACCAAGTCATGGCTCTCAAGCACATA +
Preference number: 6 (lower is better)
Translates to: QLMWKRRVSIVL*QAHQVMALKHI
Trigger: TATGTGCTTGAGAGCCATGACTTGGTGGGCTTGCAAGAGGACAATGGACACCCGCCTTTTCCACATCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS CAA 90 bp CATCCTGCCCAGCTGATGTGGAAAAGGCGGGTGTCCATTGTCCTCTaGCAAGCCCACCAAGTCATGGCTCTCAAGCACATATTACACATT +
Preference number: 6 (lower is better)
Translates to: HPAQLMWKRRVSIVL*QAHQVMALKHILHI
Trigger: AATGTGTAATATGTGCTTGAGAGCCATGACTTGGTGGGCTTGCAAGAGGACAATGGACACCCGCCTTTTCCACATCAGCTGGGCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS CAA 72 bp CAGGTGAAACAGTATTTAAGTTTCACGGTCTGGCCATaGATGATGACTTCTTTGGTTCTGGGAGGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: QVKQYLSFTVWP*MMTSLVLGGGR
Trigger: CCGCCCGCCTCCCAGAACCAAAGAAGTCATCATCAATGGCCAGACCGTGAAACTTAAATACTGTTTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340347.7
ENST00000341375.12
ENST00000359775.10
ENST00000414563.6
ENST00000518214.5
ENST00000523468.5
CDS TCA 72 bp AGTGTGCAACGGTATGTGAGCGAGCACGACAGCATGTaGGTGCGAGAGTGTGAGCATATTGGTGACTATATA +
Preference number: 6 (lower is better)
Translates to: SVQRYVSEHDSM*VRECEHIGDYI
Trigger: TATATAGTCACCAATATGCTCACACTCTCGCACTCACATGCTGTCGTGCTCGCTCACATACCGTTGCACACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517432.5
ENST00000523706.5
CDS TCA 72 bp TTTAGGTATATGACTAAGCACGTGGCAACTGGCCCTTaGCATCCACAATGCAGGGACAAGGCCATAAATACA +
Preference number: 6 (lower is better)
Translates to: FRYMTKHVATGP*HPQCRDKAINT
Trigger: TGTATTTATGGCCTTGTCCCTGCATTGTGGATGTCAAGGGCCAGTTGCCACGTGCTTAGTCATATACCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517432.5
ENST00000523706.5
CDS GCA 72 bp GCAGGACTGTCCTTAAGGGCATTTAGGAATCCTGTTTaGTGTGAACCTGTGGGAATGAAACCAACATTTAGT +
Preference number: 6 (lower is better)
Translates to: AGLSLRAFRNPV*CEPVGMKPTFS
Trigger: ACTAAATGTTGGTTTCATTCCCACAGGTTCACAGCAAACAGGATTCCTAAATGCCCTTAAGGACAGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422910.2
ENST00000517432.5
ENST00000523706.5
CDS CCA 72 bp ATGTCTAAACACTGCTTTTCAGTGTTACGTGTGTGCTaGAGGATCGGTTCGTATTTCTTCCCTAGTTGTGTC +
Preference number: 6 (lower is better)
Translates to: MSKHCFSVLRVC*RIGSYFFPSCV
Trigger: GACACAACTAGGGAAGAAATACGAACCGATCCTCCAGCACACACGTAACACTGAAAAGCAGTGTTTAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS CAA 90 bp CTTGCAAGCCCACCAAGTCATGGCTCTCAAGCACATATTACACATTaGTGTCACGTTTGGATGAAAGATTATAGTCAGAAAGAATGGCAA +
Preference number: 6 (lower is better)
Translates to: LASPPSHGSQAHITH*CHVWMKDYSQKEWQ
Trigger: TTGCCATTCTTTCTGACTATAATCTTTCATCCAAACGTGACACAAATGTGTAATATGTGCTTGAGAGCCATGACTTGGTGGGCTTGCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523706.5
CDS CCA 72 bp AATCTGATTTCGCCAGCATACTTACGAAGAATGACGTaGGTGATAACGAATGCAAATATAAAGACTGTCAGA +
Preference number: 6 (lower is better)
Translates to: NLISPAYLRRMT*VITNANIKTVR
Trigger: TCTGACAGTCTTTATATTTGCATTCGTTATCACCCACGTCATTCTTCGTAAGTATGCTGGCGAAATCAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523468.5
CDS CAA 72 bp CCACCAAGTCATGGCTCTCAAGCACATATTACACATTaGTGTCACGTTTGGATGAAAGATTATAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: PPSHGSQAHITH*CHVWMKDYSQK
Trigger: TTTCTGACTATAATCTTTCATCCAAACGTGACACAAATGTGTAATATGTGCTTGAGAGCCATGACTTGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523706.5