RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZDHHC13 (Homo sapiens)

Ensembl gene IDs: ENSG00000177054

Ensembl transcript IDs: ENST00000399351.7, ENST00000446113.7, ENST00000524744.1, ENST00000525490.5, ENST00000530100.1, ENST00000530698.1, ENST00000532026.5, ENST00000532812.5

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTACCTAATGGCTTTAAAAACCACGTGTTTTCCTTTGGACTTAGGTaGATTCTAAATCTTTACTTCACTTTCAAACTACAGGGCATCGAC +
Preference number: 1 (lower is better)
Translates to: LPNGFKNHVFSFGLR*ILNLYFTFKLQGID
Trigger: GTCGATGCCCTGTAGTTTGAAAGTGAAGTAAAGATTTAGAATTCACCTAAGTCCAAAGGAAAACACGTGGTTTTTAAAGCCATTAGGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399351.7
ENST00000446113.7
3UTR TCA 72 bp GGCTTTAAAAACCACGTGTTTTCCTTTGGACTTAGGTaGATTCTAAATCTTTACTTCACTTTCAAACTACAG +
Preference number: 3 (lower is better)
Translates to: GFKNHVFSFGLR*ILNLYFTFKLQ
Trigger: CTGTAGTTTGAAAGTGAAGTAAAGATTTAGAATTCACCTAAGTCCAAAGGAAAACACGTGGTTTTTAAAGCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399351.7
ENST00000446113.7
CDS TCA 90 bp GCGAAGAACCTTCTCCCTGGCTGGGTGAAAGACCATGGTGTACTGTaGTGTCCAATCTACCACACAGGGCTTCACCAAGCCAAAGCAGCC +
Preference number: 5 (lower is better)
Translates to: AKNLLPGWVKDHGVL*CPIYHTGLHQAKAA
Trigger: GGCTGCTTTGGCTTGGTGAAGCCCTGTGTGGTAGATTGGACATCACAGTACACCATGGTCTTTCACCCAGCCAGGGAGAAGGTTCTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS CCA 90 bp GTGAGGTCTTCACATTACTCCTGTAACTTCTCCGACTGGCCCGCCTaGCTTCTTTGGACCTCCGTCTGGCTTTTATATAACACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VRSSHYSCNFSDWPA*LLWTSVWLLYNTSS
Trigger: GGAGGAGGTGTTATATAAAAGCCAGACGGAGGTCCAAAGAAGCCAGGCGGGCCAGTCGGAGAAGTTACAGGAGTAATGTGAAGACCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS GCA 90 bp TATGGTGTCTTCCTGAGGGACAACGTCTGTTTCATATGCTTGCTCTaGTTCTGCAGGCTGATTCTCTCATGGGAGGTCAGGCCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: YGVFLRDNVCFICLL*FCRLILSWEVRPRK
Trigger: CTTTCTGGGCCTGACCTCCCATGAGAGAATCAGCCTGCAGAAGCAGAGCAAGCATATGAAACAGACGTTGTCCCTCAGGAAGACACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS CCA 90 bp TTCATACTGAGCGAAGAACCTTCTCCCTGGCTGGGTGAAAGACCATaGTGTACTGTGATGTCCAATCTACCACACAGGGCTTCACCAAGC +
Preference number: 5 (lower is better)
Translates to: FILSEEPSPWLGERP*CTVMSNLPHRASPS
Trigger: GCTTGGTGAAGCCCTGTGTGGTAGATTGGACATCACAGTACACCATGGTCTTTCACCCAGCCAGGGAGAAGGTTCTTCGCTCAGTATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS TCA 90 bp GTTGCTTTTCTTCATACTGAGCGAAGAACCTTCTCCCTGGCTGGGTaGAAGACCATGGTGTACTGTGATGTCCAATCTACCACACAGGGC +
Preference number: 5 (lower is better)
Translates to: VAFLHTERRTFSLAG*KTMVYCDVQSTTQG
Trigger: GCCCTGTGTGGTAGATTGGACATCACAGTACACCATGGTCTTTCACCCAGCCAGGGAGAAGGTTCTTCGCTCAGTATGAAGAAAAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS GCA 90 bp CCAAGATTGTATGGTGTCTTCCTGAGGGACAACGTCTGTTTCATATaGTTGCTCTGCTTCTGCAGGCTGATTCTCTCATGGGAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PRLYGVFLRDNVCFI*LLCFCRLILSWEVR
Trigger: CCTGACCTCCCATGAGAGAATCAGCCTGCAGAAGCAGAGCAAGCATATGAAACAGACGTTGTCCCTCAGGAAGACACCATACAATCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS GCA 90 bp CATCCTAAACAAGCAGCCTTAATTATTTCAAGGAGTAAGCAAGGATaGGGAAACAGGAGCGAAAACTGGACTGGGTGGGGTGAAGGCGGG +
Preference number: 5 (lower is better)
Translates to: HPKQAALIISRSKQG*GNRSENWTGWGEGG
Trigger: CCCGCCTTCACCCCACCCAGTCCAGTTTTCGCTCCTGTTTCCGCATCCTTGCTTACTCCTTGAAATAATTAAGGCTGCTTGTTTAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS CCA 90 bp TGTAACTTCTCCGACTGGCCCGCCTGGCTTCTTTGGACCTCCGTCTaGCTTTTATATAACACCTCCTCCACGGAATATTGTCCTTTGAGA +
Preference number: 5 (lower is better)
Translates to: CNFSDWPAWLLWTSV*LLYNTSSTEYCPLR
Trigger: TCTCAAAGGACAATATTCCGTGGAGGAGGTGTTATATAAAAGCCAGACGGAGGTCCAAAGAAGCCAGGCGGGCCAGTCGGAGAAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS CCA 90 bp TCACATTACTCCTGTAACTTCTCCGACTGGCCCGCCTGGCTTCTTTaGACCTCCGTCTGGCTTTTATATAACACCTCCTCCACGGAATAT +
Preference number: 5 (lower is better)
Translates to: SHYSCNFSDWPAWLL*TSVWLLYNTSSTEY
Trigger: ATATTCCGTGGAGGAGGTGTTATATAAAAGCCAGACGGAGGTCCAAAGAAGCCAGGCGGGCCAGTCGGAGAAGTTACAGGAGTAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS TCA 90 bp GTGGGATCTGAATTCCAGAGCCTGTTCACACTGGCTAAGCAGAAATaGGGCAGTACCACAGAGCAAAATAAGCACTCAACCAAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: VGSEFQSLFTLAKQK*GSTTEQNKHSTKGR
Trigger: CCTTCCCTTGGTTGAGTGCTTATTTTGCTCTGTGGTACTGCCTCATTTCTGCTTAGCCAGTGTGAACAGGCTCTGGAATTCAGATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS GCA 90 bp GTCCAGTCCACAGGCAGTGTTGATCATATCGAGCCACACAGCAGTTaGATACATGGCAGTGGAGTGACCTTAATGGCTTCCTTATCTAAG +
Preference number: 5 (lower is better)
Translates to: VQSTGSVDHIEPHSS*IHGSGVTLMASLSK
Trigger: CTTAGATAAGGAAGCCATTAAGGTCACTCCACTGCCATGTATGCAACTGCTGTGTGGCTCGATATGATCAACACTGCCTGTGGACTGGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS TCA 90 bp GTCCAATCTACCACACAGGGCTTCACCAAGCCAAAGCAGCCACACTaGAAGAAATCTGCCAGGTTCTGCATGAATCCAAGATTGTATGGT +
Preference number: 5 (lower is better)
Translates to: VQSTTQGFTKPKQPH*KKSARFCMNPRLYG
Trigger: ACCATACAATCTTGGATTCATGCAGAACCTGGCAGATTTCTTTCAGTGTGGCTGCTTTGGCTTGGTGAAGCCCTGTGTGGTAGATTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS CCA 90 bp AGTTTTGGGTTGCTTTTCTTCATACTGAGCGAAGAACCTTCTCCCTaGCTGGGTGAAAGACCATGGTGTACTGTGATGTCCAATCTACCA +
Preference number: 5 (lower is better)
Translates to: SFGLLFFILSEEPSP*LGERPWCTVMSNLP
Trigger: TGGTAGATTGGACATCACAGTACACCATGGTCTTTCACCCAGCCAGGGAGAAGGTTCTTCGCTCAGTATGAAGAAAAGCAACCCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS TCA 90 bp ACACTCTGTCCCTTTGAGATGAGATATGCTATAATAGGCATGTGTTaGAACAATACTGCCAGGTGGATGCTGCTGAATCCCTCTCCATCA +
Preference number: 5 (lower is better)
Translates to: TLCPFEMRYAIIGMC*NNTARWMLLNPSPS
Trigger: TGATGGAGAGGGATTCAGCAGCATCCACCTGGCAGTATTGTTTCAACACATGCCTATTATAGCATATCTCATCTCAAAGGGACAGAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS TCA 90 bp TCCTGTTTTATTCAGTTACCACCTCCAGCTTTGTACTTCAGCAGCTaGCTTTCCTTCTTCACTGGGGAGCAAATCTGCACTTGCCTTAAA +
Preference number: 5 (lower is better)
Translates to: SCFIQLPPPALYFSS*LSFFTGEQICTCLK
Trigger: TTTAAGGCAAGTGCAGATTTGCTCCCCAGTGAAGAAGGAAAGTCAGCTGCTGAAGTACAAAGCTGGAGGTGGTAACTGAATAAAACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CCA 90 bp TGCATACATGGCAGTGGAGTGACCTTAATGGCTTCCTTATCTAAGTaGGCAATTAAGAGAGGCCTAAGCAAAAACCAGTGTCTCAAAGTG +
Preference number: 5 (lower is better)
Translates to: CIHGSGVTLMASLSK*AIKRGLSKNQCLKV
Trigger: CACTTTGAGACACTGGTTTTTGCTTAGGCCTCTCTTAATTGCCCACTTAGATAAGGAAGCCATTAAGGTCACTCCACTGCCATGTATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS TCA 90 bp GAAATCCAGTTGGTTCTGGCCCAATTACTTTGTGAGCTGATAACATaGGAGGTGTCTGCCCATTTACATCTGTCATATTCACACTCTGTC +
Preference number: 5 (lower is better)
Translates to: EIQLVLAQLLCELIT*EVSAHLHLSYSHSV
Trigger: GACAGAGTGTGAATATGACAGATGTAAATGGGCAGACACCTCTCATGTTATCAGCTCACAAAGTAATTGGGCCAGAACCAACTGGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS TCA 90 bp CCAACTTACAAAGGTTTTCCAGGAATATGCTTTACTGTCAGGCCTTaGAAGGCAGCTTTCTCAATAGAACCAAGCGCTGTCAAAAACTCT +
Preference number: 5 (lower is better)
Translates to: PTYKGFPGICFTVRP*KAAFSIEPSAVKNS
Trigger: AGAGTTTTTGACAGCGCTTGGTTCTATTGAGAAAGCTGCCTTTCAAGGCCTGACAGTAAAGCATATTCCTGGAAAACCTTTGTAAGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS TCA 90 bp TTGGAGTCACTTACTATCCACCTTGTAAACAGACCTTACAAAAGATaGAATGGATGGAGGCTGTACAGAAGTAGCAGCTATTGGATCACA +
Preference number: 5 (lower is better)
Translates to: LESLTIHLVNRPYKR*NGWRLYRSSSYWIT
Trigger: TGTGATCCAATAGCTGCTACTTCTGTACAGCCTCCATCCATTTCATCTTTTGTAAGGTCTGTTTACAAGGTGGATAGTAAGTGACTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CCA 90 bp TGTAACACTTTAATTTGTGCTAATACATTCTTATCAGCTGGCCAGTaGCTAATGGTAGGGAACTCACATCATTCCAGGTCAAACGTTTTC +
Preference number: 5 (lower is better)
Translates to: CNTLICANTFLSAGQ*LMVGNSHHSRSNVF
Trigger: GAAAACGTTTGACCTGGAATGATGTGAGTTCCCTACCATTAGCCACTGGCCAGCTGATAAGAATGTATTAGCACAAATTAAAGTGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CCA 90 bp CAAGGGAAGGAAACCCAAGTTCCATTTTTAGCACCACCAATAATTTaGGAGAATTTACTTCCTCCCTTGATTCCTCAATTGCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: QGKETQVPFLAPPII*ENLLPPLIPQLQNE
Trigger: CTCATTTTGCAATTGAGGAATCAAGGGAGGAAGTAAATTCTCCCAAATTATTGGTGGTGCTAAAAATGGAACTTGGGTTTCCTTCCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS CCA 90 bp TTAGTATTCCCATCAGTTCTCAGTTTCAACTTGATACTTACCAAATaGCATGGGCTTTCAGAGGTTTGTTCCTTAATGACTGGACAACTA +
Preference number: 5 (lower is better)
Translates to: LVFPSVLSFNLILTK*HGLSEVCSLMTGQL
Trigger: TAGTTGTCCAGTCATTAAGGAACAAACCTCTGAAAGCCCATGCCATTTGGTAAGTATCAAGTTGAAACTGAGAACTGATGGGAATACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS TCA 90 bp AAGATAATTCTGTCGATTTGCACCTTGAGGTTTCATAAATGCCTCTaGCAATTTGATAAACAGTTTTGGACATTTTCCCAATGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KIILSICTLRFHKCL*QFDKQFWTFSQCCS
Trigger: AGAGCAGCATTGGGAAAATGTCCAAAACTGTTTATCAAATTGTCAGAGGCATTTATGAAACCTCAAGGTGCAAATCGACAGAATTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS TCA 72 bp ATGCGGAAACAGGAGCGAAAACTGGACTGGGTGGGGTaGAGGCGGGTGCTAAGACGCCAGGGCTGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: MRKQERKLDWVG*RRVLRRQGCEP
Trigger: GGGCTCGCAGCCCTGGCGTCTTAGCACCCGCCTTCACCCCACCCAGTCCAGTTTTCGCTCCTGTTTCCGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS TCA 72 bp CTTCTCCCTGGCTGGGTGAAAGACCATGGTGTACTGTaGTGTCCAATCTACCACACAGGGCTTCACCAAGCC +
Preference number: 6 (lower is better)
Translates to: LLPGWVKDHGVL*CPIYHTGLHQA
Trigger: GGCTTGGTGAAGCCCTGTGTGGTAGATTGGACATCACAGTACACCATGGTCTTTCACCCAGCCAGGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS GCA 72 bp AACACCTCCTCCACGGAATATTGTCCTTTGAGATTCTaGAGATCGCTGTGGTGTACCTCCCCTCTCCACGCC +
Preference number: 6 (lower is better)
Translates to: NTSSTEYCPLRF*RSLWCTSPLHA
Trigger: GGCGTGGAGAGGGGAGGTACACCACAGCGATCTGCAGAATCTCAAAGGACAATATTCCGTGGAGGAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS CCA 72 bp GTTTTCATGTGCACAGATGCCATATCGACCAAATCCTaGAGGGTGGGGGCCATGGCTGTGATTCCTGCACTG +
Preference number: 6 (lower is better)
Translates to: VFMCTDAISTKS*RVGAMAVIPAL
Trigger: CAGTGCAGGAATCACAGCCATGGCCCCCACCCTCCAGGATTTGGTCGATATGGCATCTGTGCACATGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446113.7
CDS CCA 72 bp TCCTGTAACTTCTCCGACTGGCCCGCCTGGCTTCTTTaGACCTCCGTCTGGCTTTTATATAACACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SCNFSDWPAWLL*TSVWLLYNTSS
Trigger: GGAGGAGGTGTTATATAAAAGCCAGACGGAGGTCCAAAGAAGCCAGGCGGGCCAGTCGGAGAAGTTACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS CCA 72 bp GTTTTCATGTGCACAGATGCCATATCGACCAAATCCTaGAGGGTGGGGGCCATGGCTGTGATTCCTGCACTC +
Preference number: 6 (lower is better)
Translates to: VFMCTDAISTKS*RVGAMAVIPAL
Trigger: GAGTGCAGGAATCACAGCCATGGCCCCCACCCTCCAGGATTTGGTCGATATGGCATCTGTGCACATGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532026.5
CDS CCA 72 bp AGCGAAGAACCTTCTCCCTGGCTGGGTGAAAGACCATaGTGTACTGTGATGTCCAATCTACCACACAGGGCT +
Preference number: 6 (lower is better)
Translates to: SEEPSPWLGERP*CTVMSNLPHRA
Trigger: AGCCCTGTGTGGTAGATTGGACATCACAGTACACCATGGTCTTTCACCCAGCCAGGGAGAAGGTTCTTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS CAA 90 bp GTGATGGTTGCCAAAACCTATGCACCGTCCAGTCCACAGGCAGTGTaGATCATATCGAGCCACACAGCAGTTGCATACATGGCAGTGGAG +
Preference number: 6 (lower is better)
Translates to: VMVAKTYAPSSPQAV*IISSHTAVAYMAVE
Trigger: CTCCACTGCCATGTATGCAACTGCTGTGTGGCTCGATATGATCAACACTGCCTGTGGACTGGACGGTGCATAGGTTTTGGCAACCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530100.1
CDS CAA 90 bp AGATTGTATGGTGTCTTCCTGAGGGACAACGTCTGTTTCATATGCTaGCTCTGCTTCTGCAGGCTGATTCTCTCATGGGAGGTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RLYGVFLRDNVCFIC*LCFCRLILSWEVRP
Trigger: GGGCCTGACCTCCCATGAGAGAATCAGCCTGCAGAAGCAGAGCAAGCATATGAAACAGACGTTGTCCCTCAGGAAGACACCATACAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS CAA 90 bp TCCGTCTGGCTTTTATATAACACCTCCTCCACGGAATATTGTCCTTaGAGATTCTGCAGATCGCTGTGGTGTACCTCCCCTCTCCACGCC +
Preference number: 6 (lower is better)
Translates to: SVWLLYNTSSTEYCP*RFCRSLWCTSPLHA
Trigger: GGCGTGGAGAGGGGAGGTACACCACAGCGATCTGCAGAATCTCAAAGGACAATATTCCGTGGAGGAGGTGTTATATAAAAGCCAGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS TCA 72 bp CCAAAACCTATGCACCGTCCAGTCCACAGGCAGTGTTaGTCATATCGAGCCACACAGCAGTTGCATACATGG +
Preference number: 6 (lower is better)
Translates to: PKPMHRPVHRQC*SYRATQQLHTW
Trigger: CCATGTATGCAACTGCTGTGTGGCTCGATATGATCAACACTGCCTGTGGACTGGACGGTGCATAGGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530100.1
CDS GCA 72 bp TTCCTGAGGGACAACGTCTGTTTCATATGCTTGCTCTaGTTCTGCAGGCTGATTCTCTCATGGGAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: FLRDNVCFICLL*FCRLILSWEVR
Trigger: CCTGACCTCCCATGAGAGAATCAGCCTGCAGAAGCAGAGCAAGCATATGAAACAGACGTTGTCCCTCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS CAA 72 bp GCCAAAACCTATGCACCGTCCAGTCCACAGGCAGTGTaGATCATATCGAGCCACACAGCAGTTGCATACATG +
Preference number: 6 (lower is better)
Translates to: AKTYAPSSPQAV*IISSHTAVAYM
Trigger: CATGTATGCAACTGCTGTGTGGCTCGATATGATCAACACTGCCTGTGGACTGGACGGTGCATAGGTTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530100.1
CDS TCA 72 bp ACCACACAGGGCTTCACCAAGCCAAAGCAGCCACACTaGAAGAAATCTGCCAGGTTCTGCATGAATCCAAGA +
Preference number: 6 (lower is better)
Translates to: TTQGFTKPKQPH*KKSARFCMNPR
Trigger: TCTTGGATTCATGCAGAACCTGGCAGATTTCTTTCAGTGTGGCTGCTTTGGCTTGGTGAAGCCCTGTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS GCA 72 bp ACAGGCAGTGTTGATCATATCGAGCCACACAGCAGTTaGATACATGGCAGTGGAGTGACCTTAATGGCTTCC +
Preference number: 6 (lower is better)
Translates to: TGSVDHIEPHSS*IHGSGVTLMAS
Trigger: GGAAGCCATTAAGGTCACTCCACTGCCATGTATGCAACTGCTGTGTGGCTCGATATGATCAACACTGCCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530100.1
CDS CCA 72 bp TCACATTACTCCTGTAACTTCTCCGACTGGCCCGCCTaGCTTCTTTGGACCTCCGTCTGGCTTTTATATAAC +
Preference number: 6 (lower is better)
Translates to: SHYSCNFSDWPA*LLWTSVWLLYN
Trigger: GTTATATAAAAGCCAGACGGAGGTCCAAAGAAGCCAGGCGGGCCAGTCGGAGAAGTTACAGGAGTAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS GCA 72 bp TATGGTGTCTTCCTGAGGGACAACGTCTGTTTCATATaGTTGCTCTGCTTCTGCAGGCTGATTCTCTCATGG +
Preference number: 6 (lower is better)
Translates to: YGVFLRDNVCFI*LLCFCRLILSW
Trigger: CCATGAGAGAATCAGCCTGCAGAAGCAGAGCAAGCATATGAAACAGACGTTGTCCCTCAGGAAGACACCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS GCA 72 bp CAAGCAGCCTTAATTATTTCAAGGAGTAAGCAAGGATaGGGAAACAGGAGCGAAAACTGGACTGGGTGGGGT +
Preference number: 6 (lower is better)
Translates to: QAALIISRSKQG*GNRSENWTGWG
Trigger: ACCCCACCCAGTCCAGTTTTCGCTCCTGTTTCCGCATCCTTGCTTACTCCTTGAAATAATTAAGGCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS CAA 72 bp GGCTCCTCTCCCATAGGATCCAGTCCAAGAGACAAGTaGGTCTATGTGCCAACTTACAAAGGTTTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: GSSPIGSSPRDK*VYVPTYKGFPG
Trigger: TCCTGGAAAACCTTTGTAAGTTGGCACATAGACCAACTTGTCTCTTGGACTGGATCCTATGGGAGAGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS TCA 72 bp GAATTCCAGAGCCTGTTCACACTGGCTAAGCAGAAATaGGGCAGTACCACAGAGCAAAATAAGCACTCAACC +
Preference number: 6 (lower is better)
Translates to: EFQSLFTLAKQK*GSTTEQNKHST
Trigger: GGTTGAGTGCTTATTTTGCTCTGTGGTACTGCCTCATTTCTGCTTAGCCAGTGTGAACAGGCTCTGGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS CCA 72 bp ACTAAGTGGGATCTGAATTCCAGAGCCTGTTCACACTaGCTAAGCAGAAATGAGGCAGTACCACAGAGCAAA +
Preference number: 6 (lower is better)
Translates to: TKWDLNSRACSH*LSRNEAVPQSK
Trigger: TTTGCTCTGTGGTACTGCCTCATTTCTGCTTAGCCAGTGTGAACAGGCTCTGGAATTCAGATCCCACTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS CCA 72 bp GGCAGTGGAGTGACCTTAATGGCTTCCTTATCTAAGTaGGCAATTAAGAGAGGCCTAAGCAAAAACCAGTGT +
Preference number: 6 (lower is better)
Translates to: GSGVTLMASLSK*AIKRGLSKNQC
Trigger: ACACTGGTTTTTGCTTAGGCCTCTCTTAATTGCCCACTTAGATAAGGAAGCCATTAAGGTCACTCCACTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS CAA 72 bp CTTTTATATAACACCTCCTCCACGGAATATTGTCCTTaGAGATTCTGCAGATCGCTGTGGTGTACCTCCCCT +
Preference number: 6 (lower is better)
Translates to: LLYNTSSTEYCP*RFCRSLWCTSP
Trigger: AGGGGAGGTACACCACAGCGATCTGCAGAATCTCAAAGGACAATATTCCGTGGAGGAGGTGTTATATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS CAA 90 bp CAGTTTCAACTTGATACTTACCAAATGGCATGGGCTTTCAGAGGTTaGTTCCTTAATGACTGGACAACTATCCCCCAACCTCTCTACCAC +
Preference number: 6 (lower is better)
Translates to: QFQLDTYQMAWAFRG*FLNDWTTIPQPLYH
Trigger: GTGGTAGAGAGGTTGGGGGATAGTTGTCCAGTCATTAAGGAACAAACCTCTGAAAGCCCATGCCATTTGGTAAGTATCAAGTTGAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CAA 90 bp GTAAACTCTGGCTCCTCTCCCATAGGATCCAGTCCAAGAGACAAGTaGGTCTATGTGCCAACTTACAAAGGTTTTCCAGGAATATGCTTT +
Preference number: 6 (lower is better)
Translates to: VNSGSSPIGSSPRDK*VYVPTYKGFPGICF
Trigger: AAAGCATATTCCTGGAAAACCTTTGTAAGTTGGCACATAGACCAACTTGTCTCTTGGACTGGATCCTATGGGAGAGGAGCCAGAGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS TCA 72 bp CCCTTTGAGATGAGATATGCTATAATAGGCATGTGTTaGAACAATACTGCCAGGTGGATGCTGCTGAATCCC +
Preference number: 6 (lower is better)
Translates to: PFEMRYAIIGMC*NNTARWMLLNP
Trigger: GGGATTCAGCAGCATCCACCTGGCAGTATTGTTTCAACACATGCCTATTATAGCATATCTCATCTCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS TCA 72 bp AAAGGTTTTCCAGGAATATGCTTTACTGTCAGGCCTTaGAAGGCAGCTTTCTCAATAGAACCAAGCGCTGTC +
Preference number: 6 (lower is better)
Translates to: KGFPGICFTVRP*KAAFSIEPSAV
Trigger: GACAGCGCTTGGTTCTATTGAGAAAGCTGCCTTTCAAGGCCTGACAGTAAAGCATATTCCTGGAAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CCA 72 bp TCATATCGAGCCACACAGCAGTTGCATACATGGCAGTaGAGTGACCTTAATGGCTTCCTTATAAGACATGAT +
Preference number: 6 (lower is better)
Translates to: SYRATQQLHTWQ*SDLNGFLIRHD
Trigger: ATCATGTCTTATAAGGAAGCCATTAAGGTCACTCCACTGCCATGTATGCAACTGCTGTGTGGCTCGATATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
CDS CAA 72 bp GTAAATGTCCTTGTCGGATGGCCCAGTGAAGAGGAGTaGAATTTAAATCTCCACCCAACTGATCTACAACAG +
Preference number: 6 (lower is better)
Translates to: VNVLVGWPSEEE*NLNLHPTDLQQ
Trigger: CTGTTGTAGATCAGTTGGGTGGAGATTTAAATTCAACTCCTCTTCACTGGGCCATCCGACAAGGACATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000532026.5
CDS CAA 72 bp CAAAGGTTTTCCAGGAATATGCTTTACTGTCAGGCCTaGAAAGGCAGCTTTCTCAATAGAACCAAGCGCTGT +
Preference number: 6 (lower is better)
Translates to: QRFSRNMLYCQA*KGSFLNRTKRC
Trigger: ACAGCGCTTGGTTCTATTGAGAAAGCTGCCTTTCAAGGCCTGACAGTAAAGCATATTCCTGGAAAACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CAA 90 bp GCCAACTTACAAAGGTTTTCCAGGAATATGCTTTACTGTCAGGCCTaGAAAGGCAGCTTTCTCAATAGAACCAAGCGCTGTCAAAAACTC +
Preference number: 6 (lower is better)
Translates to: ANLQRFSRNMLYCQA*KGSFLNRTKRCQKL
Trigger: GAGTTTTTGACAGCGCTTGGTTCTATTGAGAAAGCTGCCTTTCAAGGCCTGACAGTAAAGCATATTCCTGGAAAACCTTTGTAAGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS GCA 72 bp AATCCCTCTCCATCAATAAGAGTGGGGTCTGCACCATaGTGGAGTAATAATATGACCATAGGTAAATGTCCT +
Preference number: 6 (lower is better)
Translates to: NPSPSIRVGSAP*WSNNMTIGKCP
Trigger: AGGACATTTACCTATGGTCATATTATTACTCCAGCATGGTGCAGACCCCACTCTTATTGATGGAGAGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS GCA 72 bp GAGATATGCTATAATAGGCATGTGTTGAAACAATACTaGCAGGTGGATGCTGCTGAATCCCTCTCCATCAAT +
Preference number: 6 (lower is better)
Translates to: EICYNRHVLKQY*QVDAAESLSIN
Trigger: ATTGATGGAGAGGGATTCAGCAGCATCCACCTGGCAGTATTGTTTCAACACATGCCTATTATAGCATATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS GCA 72 bp GATTCAGATGGTCACAGCTCAGTTTCTCCCCAGGTGTaGCAATTAAAGAACTTTACTATGGCCTTTCATATC +
Preference number: 6 (lower is better)
Translates to: DSDGHSSVSPQV*QLKNFTMAFHI
Trigger: GATATGAAAGGCCATAGTAAAGTTCTTTAATTGGCACACCTGGGGAGAAACTGAGCTGTGACCATCTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CCA 72 bp GGGAGGTGGGATGACAGTGAGGCCTCATTAGAGAAATaGAGCACAAGTTCATGTTTTGTCTGTGAAATAATA +
Preference number: 6 (lower is better)
Translates to: GRWDDSEASLEK*STSSCFVCEII
Trigger: TATTATTTCACAGACAAAACATGAACTTGTGCTCCATTTCTCTAATGAGGCCTCACTGTCATCCCACCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CAA 90 bp TTCTTGCAGCTTCCCAATGCTGAGGGAGTCTTAGAGGCATTTGCTTaGTTTTTATTAGGAGTATGGTTTATAGTCACCCAGCCAGAATGT +
Preference number: 6 (lower is better)
Translates to: FLQLPNAEGVLEAFA*FLLGVWFIVTQPEC
Trigger: ACATTCTGGCTGGGTGACTATAAACCATACTCCTAATAAAAACAAAGCAAATGCCTCTAAGACTCCCTCAGCATTGGGAAGCTGCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525490.5
ENST00000530100.1
CDS TCA 72 bp TCAACTGCATTAACATTTCCTGCTGCAACTGCCCAGTaGAGTGGAGTGTTTTGGTGTATTTTATCAACCACA +
Preference number: 6 (lower is better)
Translates to: STALTFPAATAQ*SGVFWCILSTT
Trigger: TGTGGTTGATAAAATACACCAAAACACTCCACTTCACTGGGCAGTTGCAGCAGGAAATGTTAATGCAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS GCA 72 bp TTCCAAAAGCTTATCAACTGCATTAACATTTCCTGCTaGAACTGCCCAGTGAAGTGGAGTGTTTTGGTGTAT +
Preference number: 6 (lower is better)
Translates to: FQKLINCINISC*NCPVKWSVLVY
Trigger: ATACACCAAAACACTCCACTTCACTGGGCAGTTGCAGCAGGAAATGTTAATGCAGTTGATAAGCTTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS CCA 72 bp TTAATTTGTGCTAATACATTCTTATCAGCTGGCCAGTaGCTAATGGTAGGGAACTCACATCATTCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LICANTFLSAGQ*LMVGNSHHSRS
Trigger: TGACCTGGAATGATGTGAGTTCCCTACCATTAGCCACTGGCCAGCTGATAAGAATGTATTAGCACAAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS CAA 72 bp ATTTCCTGCTGCAACTGCCCAGTGAAGTGGAGTGTTTaGGTGTATTTTATCAACCACATTGAGAGAAGGATT +
Preference number: 6 (lower is better)
Translates to: ISCCNCPVKWSV*VYFINHIERRI
Trigger: AATCCTTCTCTCAATGTGGTTGATAAAATACACCAAAACACTCCACTTCACTGGGCAGTTGCAGCAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS CAA 72 bp CTTCCCAATGCTGAGGGAGTCTTAGAGGCATTTGCTTaGTTTTTATTAGGAGTATGGTTTATAGTCACCCAG +
Preference number: 6 (lower is better)
Translates to: LPNAEGVLEAFA*FLLGVWFIVTQ
Trigger: CTGGGTGACTATAAACCATACTCCTAATAAAAACAAAGCAAATGCCTCTAAGACTCCCTCAGCATTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525490.5
ENST00000530100.1
CDS TCA 72 bp CTTACTATCCACCTTGTAAACAGACCTTACAAAAGATaGAATGGATGGAGGCTGTACAGAAGTAGCAGCTAT +
Preference number: 6 (lower is better)
Translates to: LTIHLVNRPYKR*NGWRLYRSSSY
Trigger: ATAGCTGCTACTTCTGTACAGCCTCCATCCATTTCATCTTTTGTAAGGTCTGTTTACAAGGTGGATAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS GCA 72 bp AAGCTTATCAACTGCATTAACATTTCCTGCTGCAACTaGCCAGTGAAGTGGAGTGTTTTGGTGTATTTTATC +
Preference number: 6 (lower is better)
Translates to: KLINCINISCCN*PVKWSVLVYFI
Trigger: GATAAAATACACCAAAACACTCCACTTCACTGGGCAGTTGCAGCAGGAAATGTTAATGCAGTTGATAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399351.7
ENST00000446113.7
ENST00000525490.5
ENST00000530698.1
ENST00000532812.5
CDS CCA 72 bp CCATCAGTTCTCAGTTTCAACTTGATACTTACCAAATaGCATGGGCTTTCAGAGGTTTGTTCCTTAATGACT +
Preference number: 6 (lower is better)
Translates to: PSVLSFNLILTK*HGLSEVCSLMT
Trigger: AGTCATTAAGGAACAAACCTCTGAAAGCCCATGCCATTTGGTAAGTATCAAGTTGAAACTGAGAACTGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS TCA 72 bp GAAGTATTTTGCAAACTGCAAAGCAGTATATATAGGTaGGGTCTTCACATTACTCCTGTAACTTCTCCGACT +
Preference number: 6 (lower is better)
Translates to: EVFCKLQSSIYR*GLHITPVTSPT
Trigger: AGTCGGAGAAGTTACAGGAGTAATGTGAAGACCTCACCTATATATACTGCTTTGCAGTTTGCAAAATACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524744.1
CDS CCA 72 bp GAAACCCAAGTTCCATTTTTAGCACCACCAATAATTTaGGAGAATTTACTTCCTCCCTTGATTCCTCAATTG +
Preference number: 6 (lower is better)
Translates to: ETQVPFLAPPII*ENLLPPLIPQL
Trigger: CAATTGAGGAATCAAGGGAGGAAGTAAATTCTCCCAAATTATTGGTGGTGCTAAAAATGGAACTTGGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530100.1
CDS TCA 72 bp CTGTCGATTTGCACCTTGAGGTTTCATAAATGCCTCTaGCAATTTGATAAACAGTTTTGGACATTTTCCCAA +
Preference number: 6 (lower is better)
Translates to: LSICTLRFHKCL*QFDKQFWTFSQ
Trigger: TTGGGAAAATGTCCAAAACTGTTTATCAAATTGTCAGAGGCATTTATGAAACCTCAAGGTGCAAATCGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525490.5
CDS GCA 72 bp CTGTCCTTATCAATACAGTCTTATGCTGGTCATAGATaGCAAACAAAGGTGACTATTTTTAGTGAAGAGAGA +
Preference number: 6 (lower is better)
Translates to: LSLSIQSYAGHR*QTKVTIFSEER
Trigger: TCTCTCTTCACTAAAAATAGTCACCTTTGTTTGGCATCTATGACCAGCATAAGACTGTATTGATAAGGACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525490.5