Pregenerated sensors for ZCRB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000139168Ensembl transcript IDs: ENST00000266529.8, ENST00000548022.2, ENST00000551102.1, ENST00000552235.2, ENST00000676501.1, ENST00000677694.1, ENST00000678375.1, ENST00000678390.1, ENST00000679184.1, ENST00000679269.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCGGCGAGCGGACGGCTaGATTTACGGGGTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALRRADG*IYGVSR Trigger: CCGGGAGACCCCGTAAATGCAGCCGTCCGCTCGCCG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679269.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTGGCATCACGAGTCCTaGGAGGGGTCAGGCGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALWHHES*EGSGAE Trigger: CTCCGCGCCTGACCCCTCCCAGGACTCGTGATGCCA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000266529.8 ENST00000552235.2 ENST00000676501.1 ENST00000677694.1 ENST00000679184.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCGTTACACGTTCTGCTaGGAGCCGCGAAGGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALRYTFC*EPRRQA Trigger: TGCCTGCCTTCGCGGCTCTCAGCAGAACGTGTAACG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTTCTTCCCGACTGTTTaGGATCCGGGCCCCGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALFFPTV*DPGPEG Trigger: GCCTTCGGGGCCCGGATCTCAAACAGTCGGGAAGAA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000552235.2 ENST00000676501.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTAGAGAAGGCCGCAGCTaGGGAGGCGTTTACCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALREGRS*GGVYLQ Trigger: CTGAAGGTAAACGCCTCCTCAGCTGCGGCCTTCTCT...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTGCGTTTACCTTCAGGTaGGTTGGGCCTGGGAGACCA | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALAFTFR*VGPGRP Trigger: TGGTCTCCCAGGCCCAACCCACCTGAAGGTAAACGC...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTCCACCACTCATTTCTaGGATAACGGCGGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALSTTHF*DNGGER Trigger: CCGCTCGCCGCCGTTATCCCAGAAATGAGTGGTGGA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679269.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCAGAGGTTAAGGTCCTaGAATAAAAAGGGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALQRLRS*NKKGGG Trigger: CCCGCCACCCTTTTTATTCCAGGACCTTAACCTCTG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCAGTGCCAGATTGTATaGGTAGGGAGACGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALQCQIV*VGRRVL Trigger: CAAAACCCGTCTCCCTACCCATACAATCTGGCACTG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTGAAAATATCTTCAGGTaGGTTGGGCCTGGGAGACCA | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALENIFR*VGPGRP Trigger: TGGTCTCCCAGGCCCAACCCACCTGAAGATATTTTC...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676501.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTGGCATGCCAATTCGTaGAGGAATGAGAAAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALWHANS*RNEKTA Trigger: GGCAGTTTTCTCATTCCTTCACGAATTGGCATGCCA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCGTGCGGTGTGTATTTaGGATGGGAAGATCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALRAVCI*DGKINH Trigger: ATGGTTGATCTTCCCATCTCAAATACACACCGCACG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCATCACAGGGTGTACTaGGACAAACCTAGATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALHHRVY*DKPRWS Trigger: AGACCATCTAGGTTTGTCTCAGTACACCCTGTGATG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR GCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTACATTACCTGCACCTTaGTCACCCAGGTCAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALTLPAP*SPRSER Trigger: TCTTTCTGACCTGGGTGAGCAAGGTGCAGGTAATGT...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTAGGTCAGAAAGAGCATaGGGACTCAGACAGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALRSERA*GLRQNL Trigger: AAGGTTCTGTCTGAGTCCCCATGCTCTTTCTGACCT...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR GCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTACCAACACTTTCAGTaGCAGATTGTATGGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALYQHFQ*QIVWVG Trigger: CCCTACCCATACAATCTGGCACTGAAAGTGTTGGTA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTGTCAGCAAATTACCGTaGAAATATCAGGCTCAACCA | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALVSKLP*KYQAQP Trigger: TGGTTGAGCCTGATATTTTCACGGTAATTTGCTGAC...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTTTTTCTTTCTTCTTTaGAGGCTCACGTTCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALFFFLL*RLTFSE Trigger: CTCGGAGAACGTGAGCCTCCAAAGAAGAAAGAAAAA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 6 transcripts: ENST00000266529.8 ENST00000552235.2 ENST00000676501.1 ENST00000677694.1 ENST00000679184.1 ENST00000679269.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCAATTCGTGAAGGAATaGGAAAACTGCCTCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALQFVKE*ENCLMF Trigger: AAACATGAGGCAGTTTTCTCATTCCTTCACGAATTG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCAGAACCTTAGCCACTaGTTTTTGCTAATACACAGT | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALQNLSH*FLLIHS Trigger: ACTGTGTATTAGCAAAAATCAGTGGCTAAGGTTCTG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR GCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTCTCATTTGAAACTATaGGTTACACGTTCTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALSHLKL*VTRSAE Trigger: CTCAGCAGAACGTGTAACGCATAGTTTCAAATGAGA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR GCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTGATTTAAAAAGAGCGTaGGGTGTGTATTTGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALDLKRA*GVYLRW Trigger: CCATCTCAAATACACACCGCACGCTCTTTTTAAATC...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTGGTGTGTATTTGAGATaGGAAGATCAACCATCACAA | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALGVYLR*EDQPSQ Trigger: TTGTGATGGTTGATCTTCCCATCTCAAATACACACC...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCTTAGGAGACCACTGTaGTATATGTGGTTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALLRRPL*YMWFVV Trigger: AACAACAAACCACATATACCACAGTGGTCTCCTAAG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCAAATGGAAAAATACTaGCTCTATGGCATGCCAATT | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALQMEKY*LYGMPI Trigger: AATTGGCATGCCATAGAGTCAGTATTTTTCCATTTG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR TCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCCAAATTCAAATTTCTaGTTTAAAAAGAGCGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALPNSNF*FKKSVR Trigger: CCGCACGCTCTTTTTAAATCAGAAATTTGAATTTGG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCACCTGCAGACAGAATaGGAAGATTTAGTCATAAAT | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALHLQTE*EDLVIN Trigger: ATTTATGACTAAATCTTCCCATTCTGTCTGCAGGTG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000266529.8 ENST00000676501.1 ENST00000677694.1 ENST00000679184.1 ENST00000679269.1 |
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| CDS-3UTR CCA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTAAACTGCCTCATGTTTaGTGTTATGGGGGAATTATT | + |
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Preference number: 4 (lower is better) Translates to: RINFRSPHVNKSGMNKALKLPHV*CYGGII Trigger: AATAATTCCCCCATAACACCAAACATGAGGCAGTTT...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS GCA 90 bp | AATAAGTGGAGGAGATGGGAGGGAAGGCTCTTGCTTACAACAGAATaGCAAGGGATGACTGGTGAATGTAGAGGGAATGCTGGAGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: NKWRRWEGRLLLTTE*QGMTGECRGNAGVG Trigger: TCCAACTCCAGCATTCCCTCTACATTCACCAGTCATCCCTTGGCATTCTGTTGTAAGCAAGAGCCTTCCCTCCCATCTCCTCCACTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS-3UTR CAA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTGAGGGGCAGAGCGTTTaGGCAGCCGAGTCTGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: RINFRSPHVNKSGMNKALEGQSV*AAESGE Trigger: CTCCCCAGACTCGGCTGCCAAAACGCTCTGCCCCTC...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS TCA 90 bp | TCTGAGTGTTACGTGATTTCACAGTGCAGACATCACAGGGTGTACTaGGACAAACCTAGATGGTCTAGCCTATTGCTCCTAGGCTACAAC | + |
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Preference number: 5 (lower is better) Translates to: SECYVISQCRHHRVY*DKPRWSSLLLLGYN Trigger: GTTGTAGCCTAGGAGCAATAGGCTAGACCATCTAGGTTTGTCTCAGTACACCCTGTGATGTCTGCACTGTGAAATCACGTAACACTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS GCA 90 bp | GTCAGTATCCTTGATGATTTGGCTCCCATCTCCTTCATCTTTCACTaGTCCTTCCCACGCACACACTATGAAGTCTACCCAAAAGAAACC | + |
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Preference number: 5 (lower is better) Translates to: VSILDDLAPISFIFH*SFPRTHYEVYPKET Trigger: GGTTTCTTTTGGGTAGACTTCATAGTGTGTGCGTGGGAAGGAGCAGTGAAAGATGAAGGAGATGGGAGCCAAATCATCAAGGATACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS TCA 90 bp | CTTCAGGAACTCAACATAGATACGTCGCTTTTTAAGTTTCTCATTTaGAACTATGCGTTACACGTTCTGCTGAGAGCCGCGAAGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LQELNIDTSLFKFLI*NYALHVLLRAAKAG Trigger: GCCTGCCTTCGCGGCTCTCAGCAGAACGTGTAACGCATAGTTTCAAATGAGAAACTTAAAAAGCGACGTATCTATGTTGAGTTCCTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000551102.1 ENST00000677694.1 |
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| CDS TCA 90 bp | CCCAGGTCAGAAAGAGCATGGGGACTCAGACAGAACCTTAGCCACTaGTTTTTGCTAATACACAGTCATGCTATGCTTAATGAAGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PRSERAWGLRQNLSH*FLLIHSHAMLNEGG Trigger: ACCTCCTTCATTAAGCATAGCATGACTGTGTATTAGCAAAAATCAGTGGCTAAGGTTCTGTCTGAGTCCCCATGCTCTTTCTGACCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS GCA 90 bp | TCACTCTACACATGTGGTAGATCTAAGGCATACATACTGGACAGCTaGTGTGTTCCTGAGGTATACCCATGGCAACTATCAACTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: SLYTCGRSKAYILDS*CVPEVYPWQLSTPS Trigger: TGATGGAGTTGATAGTTGCCATGGGTATACCTCAGGAACACAGCAGCTGTCCAGTATGTATGCCTTAGATCTACCACATGTGTAGAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS GCA 90 bp | TTCCCACGCACACACTATGAAGTCTACCCAAAAGAAACCACTCAATaGTCCAGTAGCATGGCCTGTATTTCCCCAAATTTGTGCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: FPRTHYEVYPKETTQ*SSSMACISPNLCLC Trigger: ACAAAGGCACAAATTTGGGGAAATACAGGCCATGCTACTGGAGCATTGAGTGGTTTCTTTTGGGTAGACTTCATAGTGTGTGCGTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS-3UTR CAA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTCTTCTTCCCGACTGTTaGAGATCCGGGCCCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RINFRSPHVNKSGMNKALLLPDC*RSGPRR Trigger: CCTTCGGGGCCCGGATCTCAAACAGTCGGGAAGAAG...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000552235.2 ENST00000676501.1 |
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| CDS TCA 90 bp | ATAAGGCACCTCGAGTGGGCTTACCTAAGATTACCCCTCTTTTTCTaGAATGTTTGTCCTCTAGAATTTGCACAGGTGCCTCTTACTCGT | + |
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Preference number: 5 (lower is better) Translates to: IRHLEWAYLRLPLFF*NVCPLEFAQVPLTR Trigger: ACGAGTAAGAGGCACCTGTGCAAATTCTAGAGGACAAACATTTCAGAAAAAGAGGGGTAATCTTAGGTAAGCCCACTCGAGGTGCCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS GCA 90 bp | AATGCTCTATTGAATATGTACTGTATATGTACATTACCTGCACCTTaGTCACCCAGGTCAGAAAGAGCATGGGGACTCAGACAGAACCTT | + |
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Preference number: 5 (lower is better) Translates to: NALLNMYCICTLPAP*SPRSERAWGLRQNL Trigger: AAGGTTCTGTCTGAGTCCCCATGCTCTTTCTGACCTGGGTGAGCAAGGTGCAGGTAATGTACATATACAGTACATATTCAATAGAGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS TCA 90 bp | TTGCTAATACACAGTCATGCTATGCTTAATGAAGGAGGTATGTTCTaGGTGTTACGTGATTTCACAGTGCAGACATCACAGGGTGTACTG | + |
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Preference number: 5 (lower is better) Translates to: LLIHSHAMLNEGGMF*VLRDFTVQTSQGVL Trigger: CAGTACACCCTGTGATGTCTGCACTGTGAAATCACGTAACACTCAGAACATACCTCCTTCATTAAGCATAGCATGACTGTGTATTAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS CCA 90 bp | TCCATCATAGTGCCAGATACACCTGTGCTTCAAATGTCAATCTTATaGAGCAGCACTTTTCCAATTCTACCCTCACCACTACCTTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: SIIVPDTPVLQMSIL*SSTFPILPSPLPCY Trigger: ATAACAAGGTAGTGGTGAGGGTAGAATTGGAAAAGTGCTGCTCCATAAGATTGACATTTGAAGCACAGGTGTATCTGGCACTATGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS-3UTR CAA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTTACATTACCTGCACCTaGCTCACCCAGGTCAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RINFRSPHVNKSGMNKALYITCT*LTQVRK Trigger: CTTTCTGACCTGGGTGAGCAAGGTGCAGGTAATGTA...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS TCA 90 bp | GTGTATTTGAGATGGGAAGATCAACCATCACAAATGGAAAAATACTaGCTCTATGGCATGCCAATTCGTGAAGGAATGAGAAAACTGCCT | + |
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Preference number: 5 (lower is better) Translates to: VYLRWEDQPSQMEKY*LYGMPIREGMRKLP Trigger: AGGCAGTTTTCTCATTCCTTCACGAATTGGCATGCCATAGAGTCAGTATTTTTCCATTTGTGATGGTTGATCTTCCCATCTCAAATACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000551102.1 ENST00000677694.1 |
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| CDS GCA 90 bp | TTATTGTTCCTAACCCTCAGCCCTGTTATCATCCATTACCATTTTTaGATGTTTCTAGTCTTTCCAACGATCTCCAAGCTATCTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLFLTLSPVIIHYHF*MFLVFPTISKLSLK Trigger: CTTCAGAGATAGCTTGGAGATCGTTGGAAAGACTAGAAACATGCAAAAATGGTAATGGATGATAACAGGGCTGAGGGTTAGGAACAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678390.1 |
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| CDS TCA 90 bp | ACACATCACTATTACCCACTTTATTTCATAATGATCTCTGAAATCTaGCCACCTCTCAAATCTGACCAGTCTCTATATCTCCACCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: THHYYPLYFIMISEI*PPLKSDQSLYLHLY Trigger: GTACAGGTGGAGATATAGAGACTGGTCAGATTTGAGAGGTGGTCAGATTTCAGAGATCATTATGAAATAAAGTGGGTAATAGTGATGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CCA 90 bp | TTTATAATTCTTACTGATAAAAGACCAATAAATAAGTGGAGGAGATaGGAGGGAAGGCTCTTGCTTACAACAGAATGCCAAGGGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: FIILTDKRPINKWRR*EGRLLLTTECQGMT Trigger: AGTCATCCCTTGGCATTCTGTTGTAAGCAAGAGCCTTCCCTCCCATCTCCTCCACTTATTTATTGGTCTTTTATCAGTAAGAATTATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS-3UTR CAA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTGCCACATTGGGAATATaGAGGAAGGTAGGAGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RINFRSPHVNKSGMNKALATLGI*RKVGEV Trigger: TACTTCTCCTACCTTCCTCAATATTCCCAATGTGGC...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000266529.8 ENST00000676501.1 ENST00000677694.1 ENST00000679184.1 ENST00000679269.1 |
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| CDS GCA 90 bp | AAAATCACACCATTCCTTTGTTCAAAAATCTTTGGTTCTGTAAGTTaGCTATTCTTTGTCCCACTGTCAGTATCCTTGATGATTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KITPFLCSKIFGSVS*LFFVPLSVSLMIWL Trigger: GAGCCAAATCATCAAGGATACTGACAGTGGGACAAAGAATAGGCAACTTACAGAACCAAAGATTTTTGAACAAAGGAATGGTGTGATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS GCA 90 bp | AATATCAGGCTCAACCAAATTCAAATTTCTGATTTAAAAAGAGCGTaGGGTGTGTATTTGAGATGGGAAGATCAACCATCACAAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NIRLNQIQISDLKRA*GVYLRWEDQPSQME Trigger: TTCCATTTGTGATGGTTGATCTTCCCATCTCAAATACACACCGCACGCTCTTTTTAAATCAGAAATTTGAATTTGGTTGAGCCTGATATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000551102.1 ENST00000677694.1 |
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| CDS-3UTR CAA 90 bp | AGGATTAATTTCAGAAGTCCTCATGTAAACAAATCAGGCATGAATAAAGCCCTTAAAACTGCCTCATGTTaGGTGTTATGGGGGAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: RINFRSPHVNKSGMNKALKTASC*VLWGNY Trigger: ATAATTCCCCCATAACACCAAACATGAGGCAGTTTT...AAGGGCTTTATTCATGCCTGATTTGTTTACATGAGGACTTCTGAAATTAATCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS CAA 72 bp | CAGATAATAGCAGCCACGGTGCTTCTTCCCGACTGTTaGAGATCCGGGCCCCGAAGGCGGGCCCAGAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: QIIAATVLLPDC*RSGPRRRAQRR Trigger: TCGCCTCTGGGCCCGCCTTCGGGGCCCGGATCTCAAACAGTCGGGAAGAAGCACCGTGGCTGCTATTATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552235.2 |
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| CDS CCA 72 bp | GCTGAGAGCCGCGAAGGCAGGCAGAGGTTAAGGTCCTaGAATAAAAAGGGTGGCGGGAGAGAGGGGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AESREGRQRLRS*NKKGGGREGQS Trigger: GCTCTGCCCCTCTCTCCCGCCACCCTTTTTATTCCAGGACCTTAACCTCTGCCTGCCTTCGCGGCTCTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS TCA 72 bp | AGGGAAGGCTCTTGCTTACAACAGAATGCCAAGGGATaGCTGGTGAATGTAGAGGGAATGCTGGAGTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: REGSCLQQNAKG*LVNVEGMLELE Trigger: TTCCAACTCCAGCATTCCCTCTACATTCACCAGTCATCCCTTGGCATTCTGTTGTAAGCAAGAGCCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CCA 72 bp | CACTCTACACATGTGGTAGATCTAAGGCATACATACTaGACAGCTGCTGTGTTCCTGAGGTATACCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSTHVVDLRHTY*TAAVFLRYTHG Trigger: GCCATGGGTATACCTCAGGAACACAGCAGCTGTCCAGTATGTATGCCTTAGATCTACCACATGTGTAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS CAA 90 bp | TGTAAGTTGCCTATTCTTTGTCCCACTGTCAGTATCCTTGATGATTaGGCTCCCATCTCCTTCATCTTTCACTGCTCCTTCCCACGCACA | + |
|
Preference number: 6 (lower is better) Translates to: CKLPILCPTVSILDD*APISFIFHCSFPRT Trigger: TGTGCGTGGGAAGGAGCAGTGAAAGATGAAGGAGATGGGAGCCAAATCATCAAGGATACTGACAGTGGGACAAAGAATAGGCAACTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS TCA 72 bp | CTTCATCTTTCACTGCTCCTTCCCACGCACACACTATaGAGTCTACCCAAAAGAAACCACTCAATGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHLSLLLPTHTL*SLPKRNHSMLQ Trigger: CTGGAGCATTGAGTGGTTTCTTTTGGGTAGACTTCATAGTGTGTGCGTGGGAAGGAGCAGTGAAAGATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CAA 90 bp | CCTCGAGTGGGCTTACCTAAGATTACCCCTCTTTTTCTGAAATGTTaGTCCTCTAGAATTTGCACAGGTGCCTCTTACTCGTTTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRVGLPKITPLFLKC*SSRICTGASYSFQV Trigger: GACCTGAAACGAGTAAGAGGCACCTGTGCAAATTCTAGAGGACAAACATTTCAGAAAAAGAGGGGTAATCTTAGGTAAGCCCACTCGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS CAA 90 bp | GATAAAAGACCAATAAATAAGTGGAGGAGATGGGAGGGAAGGCTCTaGCTTACAACAGAATGCCAAGGGATGACTGGTGAATGTAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DKRPINKWRRWEGRL*LTTECQGMTGECRG Trigger: CCCTCTACATTCACCAGTCATCCCTTGGCATTCTGTTGTAAGCAAGAGCCTTCCCTCCCATCTCCTCCACTTATTTATTGGTCTTTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS TCA 72 bp | TACGTGATTTCACAGTGCAGACATCACAGGGTGTACTaGGACAAACCTAGATGGTCTAGCCTATTGCTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: YVISQCRHHRVY*DKPRWSSLLLL Trigger: TAGGAGCAATAGGCTAGACCATCTAGGTTTGTCTCAGTACACCCTGTGATGTCTGCACTGTGAAATCACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS GCA 72 bp | ACATGTGGTAGATCTAAGGCATACATACTGGACAGCTaGTGTGTTCCTGAGGTATACCCATGGCAACTATCA | + |
|
Preference number: 6 (lower is better) Translates to: TCGRSKAYILDS*CVPEVYPWQLS Trigger: TGATAGTTGCCATGGGTATACCTCAGGAACACAGCAGCTGTCCAGTATGTATGCCTTAGATCTACCACATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS CAA 90 bp | TTTGGTTCTGTAAGTTGCCTATTCTTTGTCCCACTGTCAGTATCCTaGATGATTTGGCTCCCATCTCCTTCATCTTTCACTGCTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FGSVSCLFFVPLSVS*MIWLPSPSSFTAPS Trigger: GGAAGGAGCAGTGAAAGATGAAGGAGATGGGAGCCAAATCATCAAGGATACTGACAGTGGGACAAAGAATAGGCAACTTACAGAACCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS GCA 72 bp | TTGAATATGTACTGTATATGTACATTACCTGCACCTTaGTCACCCAGGTCAGAAAGAGCATGGGGACTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LNMYCICTLPAP*SPRSERAWGLR Trigger: TCTGAGTCCCCATGCTCTTTCTGACCTGGGTGAGCAAGGTGCAGGTAATGTACATATACAGTACATATTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS CCA 72 bp | GTGCCAGATACACCTGTGCTTCAAATGTCAATCTTATaGAGCAGCACTTTTCCAATTCTACCCTCACCACTA | + |
|
Preference number: 6 (lower is better) Translates to: VPDTPVLQMSIL*SSTFPILPSPL Trigger: TAGTGGTGAGGGTAGAATTGGAAAAGTGCTGCTCCATAAGATTGACATTTGAAGCACAGGTGTATCTGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS CAA 72 bp | ATTGAATATGTACTGTATATGTACATTACCTGCACCTaGCTCACCCAGGTCAGAAAGAGCATGGGGACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: IEYVLYMYITCT*LTQVRKSMGTQ Trigger: CTGAGTCCCCATGCTCTTTCTGACCTGGGTGAGCAAGGTGCAGGTAATGTACATATACAGTACATATTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS CAA 90 bp | AAATGCTCTATTGAATATGTACTGTATATGTACATTACCTGCACCTaGCTCACCCAGGTCAGAAAGAGCATGGGGACTCAGACAGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: KCSIEYVLYMYITCT*LTQVRKSMGTQTEP Trigger: AGGTTCTGTCTGAGTCCCCATGCTCTTTCTGACCTGGGTGAGCAAGGTGCAGGTAATGTACATATACAGTACATATTCAATAGAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS TCA 72 bp | CTCAACATAGATACGTCGCTTTTTAAGTTTCTCATTTaGAACTATGCGTTACACGTTCTGCTGAGAGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: LNIDTSLFKFLI*NYALHVLLRAA Trigger: CGCGGCTCTCAGCAGAACGTGTAACGCATAGTTTCAAATGAGAAACTTAAAAAGCGACGTATCTATGTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000551102.1 ENST00000677694.1 |
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| CDS GCA 72 bp | ACACACTATGAAGTCTACCCAAAAGAAACCACTCAATaGTCCAGTAGCATGGCCTGTATTTCCCCAAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: THYEVYPKETTQ*SSSMACISPNL Trigger: CAAATTTGGGGAAATACAGGCCATGCTACTGGAGCATTGAGTGGTTTCTTTTGGGTAGACTTCATAGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CCA 72 bp | TCTACCCAAAAGAAACCACTCAATGCTCCAGTAGCATaGCCTGTATTTCCCCAAATTTGTGCCTTTGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: STQKKPLNAPVA*PVFPQICAFVH Trigger: ATGAACAAAGGCACAAATTTGGGGAAATACAGGCCATGCTACTGGAGCATTGAGTGGTTTCTTTTGGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CAA 72 bp | GGCTTACCTAAGATTACCCCTCTTTTTCTGAAATGTTaGTCCTCTAGAATTTGCACAGGTGCCTCTTACTCG | + |
|
Preference number: 6 (lower is better) Translates to: GLPKITPLFLKC*SSRICTGASYS Trigger: CGAGTAAGAGGCACCTGTGCAAATTCTAGAGGACAAACATTTCAGAAAAAGAGGGGTAATCTTAGGTAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS CAA 72 bp | CCTAACCCTCAGCCCTGTTATCATCCATTACCATTTTaGCATGTTTCTAGTCTTTCCAACGATCTCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PNPQPCYHPLPF*HVSSLSNDLQA Trigger: AGCTTGGAGATCGTTGGAAAGACTAGAAACATGCAAAAATGGTAATGGATGATAACAGGGCTGAGGGTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678390.1 |
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| CDS TCA 72 bp | GAAAGAGCATGGGGACTCAGACAGAACCTTAGCCACTaGTTTTTGCTAATACACAGTCATGCTATGCTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: ERAWGLRQNLSH*FLLIHSHAMLN Trigger: ATTAAGCATAGCATGACTGTGTATTAGCAAAAATCAGTGGCTAAGGTTCTGTCTGAGTCCCCATGCTCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS GCA 72 bp | CTAACCCTCAGCCCTGTTATCATCCATTACCATTTTTaGATGTTTCTAGTCTTTCCAACGATCTCCAAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LTLSPVIIHYHF*MFLVFPTISKL Trigger: TAGCTTGGAGATCGTTGGAAAGACTAGAAACATGCAAAAATGGTAATGGATGATAACAGGGCTGAGGGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678390.1 |
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| CDS CCA 72 bp | AAAGGTAAAAGGGAGTGGGCTCTGAAATCTCACTGTTaGATTCAAATATTTTCTCCACCACTAGCTAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KGKREWALKSHC*IQIFSPPLASK Trigger: CTTGCTAGCTAGTGGTGGAGAAAATATTTGAATCCAACAGTGAGATTTCAGAGCCCACTCCCTTTTACCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678390.1 |
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| CDS CCA 72 bp | CTTACTGATAAAAGACCAATAAATAAGTGGAGGAGATaGGAGGGAAGGCTCTTGCTTACAACAGAATGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LTDKRPINKWRR*EGRLLLTTECQ Trigger: TTGGCATTCTGTTGTAAGCAAGAGCCTTCCCTCCCATCTCCTCCACTTATTTATTGGTCTTTTATCAGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CAA 90 bp | AATCTTATGGAGCAGCACTTTTCCAATTCTACCCTCACCACTACCTaGTTATTCCTATTAAGCAATCCCTGTTTGAGAAGGCAAATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: NLMEQHFSNSTLTTT*LFLLSNPCLRRQIL Trigger: AAGGATTTGCCTTCTCAAACAGGGATTGCTTAATAGGAATAACAAGGTAGTGGTGAGGGTAGAATTGGAAAAGTGCTGCTCCATAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS GCA 72 bp | ACCCCTCTTTTTCTGAAATGTTTGTCCTCTAGAATTTaGACAGGTGCCTCTTACTCGTTTCAGGTCTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: TPLFLKCLSSRI*TGASYSFQVFI Trigger: AATAAAGACCTGAAACGAGTAAGAGGCACCTGTGCAAATTCTAGAGGACAAACATTTCAGAAAAAGAGGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548022.2 |
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| CDS CAA 72 bp | ACACTCTTAGGAGACCACTGTGGTATATGTGGTTTGTaGTTAATCAAAAAGTTGTTATGCTGTGCATGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLLGDHCGICGL*LIKKLLCCACL Trigger: CAGGCATGCACAGCATAACAACTTTTTGATTAACAACAAACCACATATACCACAGTGGTCTCCTAAGAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS CAA 90 bp | TTTATTGTTCCTAACCCTCAGCCCTGTTATCATCCATTACCATTTTaGCATGTTTCTAGTCTTTCCAACGATCTCCAAGCTATCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FIVPNPQPCYHPLPF*HVSSLSNDLQAISE Trigger: TTCAGAGATAGCTTGGAGATCGTTGGAAAGACTAGAAACATGCAAAAATGGTAATGGATGATAACAGGGCTGAGGGTTAGGAACAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678390.1 |
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| CDS TCA 72 bp | AATGGAAAAATACTGACTCTATGGCATGCCAATTCGTaGAGGAATGAGAAAACTGCCTCATGTTTGGTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: NGKILTLWHANS*RNEKTASCLVL Trigger: TAACACCAAACATGAGGCAGTTTTCTCATTCCTTCACGAATTGGCATGCCATAGAGTCAGTATTTTTCCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000551102.1 ENST00000677694.1 |
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| CDS GCA 72 bp | CCATTCCTTTGTTCAAAAATCTTTGGTTCTGTAAGTTaGCTATTCTTTGTCCCACTGTCAGTATCCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: PFLCSKIFGSVS*LFFVPLSVSLM Trigger: CATCAAGGATACTGACAGTGGGACAAAGAATAGGCAACTTACAGAACCAAAGATTTTTGAACAAAGGAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS GCA 72 bp | GGTATATGTGGTTTGTTGTTAATCAAAAAGTTGTTATaGTGTGCATGCCTGTACTATGGCTGGGTACCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GICGLLLIKKLL*CACLYYGWVPF Trigger: AAAAGGTACCCAGCCATAGTACAGGCATGCACAGCATAACAACTTTTTGATTAACAACAAACCACATATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS TCA 72 bp | AAATTACATCAGAGATTTAAAAGGACAAATCTACTGTaGCTCCCATGTTTCTGGCAAGGGAAAAGAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: KLHQRFKRTNLL*LPCFWQGKRGR Trigger: TCTACCTCTTTTCCCTTGCCAGAAACATGGGAGTCACAGTAGATTTGTCCTTTTAAATCTCTGATGTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CAA 72 bp | ACCATTCCTTTGTTCAAAAATCTTTGGTTCTGTAAGTaGCCTATTCTTTGTCCCACTGTCAGTATCCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: TIPLFKNLWFCK*PILCPTVSILD Trigger: ATCAAGGATACTGACAGTGGGACAAAGAATAGGCAACTTACAGAACCAAAGATTTTTGAACAAAGGAATGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CAA 72 bp | ATTACACTCTTAGGAGACCACTGTGGTATATGTGGTTaGTTGTTAATCAAAAAGTTGTTATGCTGTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: ITLLGDHCGICG*LLIKKLLCCAC Trigger: GCATGCACAGCATAACAACTTTTTGATTAACAACAAACCACATATACCACAGTGGTCTCCTAAGAGTGTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS CAA 90 bp | GTACAATGTATTACACTCTTAGGAGACCACTGTGGTATATGTGGTTaGTTGTTAATCAAAAAGTTGTTATGCTGTGCATGCCTGTACTAT | + |
|
Preference number: 6 (lower is better) Translates to: VQCITLLGDHCGICG*LLIKKLLCCACLYY Trigger: ATAGTACAGGCATGCACAGCATAACAACTTTTTGATTAACAACAAACCACATATACCACAGTGGTCTCCTAAGAGTGTAATACATTGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS TCA 72 bp | TATTACCCACTTTATTTCATAATGATCTCTGAAATCTaGCCACCTCTCAAATCTGACCAGTCTCTATATCTC | + |
|
Preference number: 6 (lower is better) Translates to: YYPLYFIMISEI*PPLKSDQSLYL Trigger: GAGATATAGAGACTGGTCAGATTTGAGAGGTGGTCAGATTTCAGAGATCATTATGAAATAAAGTGGGTAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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| CDS CCA 72 bp | ATGTATTACACTCTTAGGAGACCACTGTGGTATATGTaGTTTGTTGTTAATCAAAAAGTTGTTATGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MYYTLRRPLWYM*FVVNQKVVMLC Trigger: GCACAGCATAACAACTTTTTGATTAACAACAAACCACATATACCACAGTGGTCTCCTAAGAGTGTAATACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677694.1 |
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| CDS CAA 72 bp | AAAACAGTGAAATACGAGAAGTTCAAGTTCTTTTTATaGTTCCTAACCCTCAGCCCTGTTATCATCCATTAC | + |
|
Preference number: 6 (lower is better) Translates to: KTVKYEKFKFFL*FLTLSPVIIHY Trigger: GTAATGGATGATAACAGGGCTGAGGGTTAGGAACAATAAAAAGAACTTGAACTTCTCGTATTTCACTGTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678390.1 |
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| CDS CAA 72 bp | TGTAGAGGGAATGCTGGAGTTGGAAAAATCACCAATTaGACAGAAATATTGAATAAGGTAGTTGCTTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: CRGNAGVGKITN*TEILNKVVALC Trigger: ACATAAAGCAACTACCTTATTCAATATTTCTGTCAAATTGGTGATTTTTCCAACTCCAGCATTCCCTCTACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678375.1 |
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