Pregenerated sensors for ZCCHC7 (Homo sapiens)

Ensembl gene IDs: ENSG00000147905

Ensembl transcript IDs: ENST00000322831.6, ENST00000481507.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	TTGCCTTTTAAAGTCAAAGCACCTATCAAGTGCCAAATTAGAAGAGATTGTTTCAGGTTACAGAGTAGGTaGAAATTCAGATACACAGAA	+
Preference number: 2 (lower is better) Translates to: LPFKVKAPIKCQIRRDCFRLQSR*KFRYTE Trigger: TTCTGTGTATCTGAATTTGCACCTACTCTGTAACCT...GAAACAATCTCTTCTAATTTGGCACTTGATAGGTGCTTTGACTTTAAAAGGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322831.6
CDS-3UTR TCA 90 bp	ATCGCAGTTAGGTTACAGAGTAGGTGCAAATTCAGATACACAGAAACAAATTCTGCGCCCTGCCACGAGTaGGGGGCGGACGGGAGACGT	+
Preference number: 4 (lower is better) Translates to: IAVRLQSRCKFRYTETNSAPCHE*GADGRR Trigger: ACGTCTCCCGTCCGCCCCTCACTCGTGGCAGGGCGC...AGAATTTGTTTCTGTGTATCTGAATTTGCACCTACTCTGTAACCTAACTGCGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000322831.6
CDS-3UTR GCA 90 bp	ATCGCAGTTAGGTTACAGAGTAGGTGCAAATTCAGATACACAGAAACAAATTCTAGATTCTCCAGGAGCTaGGCCCTGCCACGAGTGAGG	+
Preference number: 4 (lower is better) Translates to: IAVRLQSRCKFRYTETNSRFSRS*ALPRVR Trigger: CCTCACTCGTGGCAGGGCGCAGCTCCTGGAGAATCT...AGAATTTGTTTCTGTGTATCTGAATTTGCACCTACTCTGTAACCTAACTGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322831.6
CDS-3UTR GCA 90 bp	ATCGCAGTTAGGTTACAGAGTAGGTGCAAATTCAGATACACAGAAACAAATTCTAGGTTACAGAGTAGGTaGAAATTCAGATACACAGAA	+
Preference number: 4 (lower is better) Translates to: IAVRLQSRCKFRYTETNSRLQSR*KFRYTE Trigger: TTCTGTGTATCTGAATTTGCACCTACTCTGTAACCT...AGAATTTGTTTCTGTGTATCTGAATTTGCACCTACTCTGTAACCTAACTGCGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322831.6
CDS-3UTR TCA 90 bp	TGCCTTTTAAAGTCAAAGCACCTATCAAGTGCCAAATTAGAAGAGATTGTTTCAATGACAAGATATTCGTaGCAGAAAAATACACTTGCC	+
Preference number: 4 (lower is better) Translates to: CLLKSKHLSSAKLEEIVSMTRYS*QKNTLA Trigger: GGCAAGTGTATTTTTCTGTCACGAATATCTTGTCAT...TGAAACAATCTCTTCTAATTTGGCACTTGATAGGTGCTTTGACTTTAAAAGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000322831.6
CDS-3UTR GCA 90 bp	ATCGCAGTTAGGTTACAGAGTAGGTGCAAATTCAGATACACAGAAACAAATTCTAAAGCACCTATCAAGTaGCAAATTAGAAGAGATTGT	+
Preference number: 4 (lower is better) Translates to: IAVRLQSRCKFRYTETNSKAPIK*QIRRDC Trigger: ACAATCTCTTCTAATTTGGCACTTGATAGGTGCTTT...AGAATTTGTTTCTGTGTATCTGAATTTGCACCTACTCTGTAACCTAACTGCGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322831.6
CDS TCA 90 bp	GCCTTGTTAAGGACACTTTTTCTAACCAAGCTGCTTATGTATAGTTaGTCAGTTTACCATCTTCTCAGGAGCAAAAAGTGTGTTGTTTGT	+
Preference number: 5 (lower is better) Translates to: ALLRTLFLTKLLMYS*SVYHLLRSKKCVVC Trigger: ACAAACAACACACTTTTTGCTCCTGAGAAGATGGTAAACTGATCAACTATACATAAGCAGCTTGGTTAGAAAAAGTGTCCTTAACAAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000481507.5
CDS-3UTR CAA 90 bp	TTGCCTTTTAAAGTCAAAGCACCTATCAAGTGCCAAATTAGAAGAGATTGTTTCACCATGGGCATTTTCTaGTGCTTGAACTCTAACATT	+
Preference number: 5 (lower is better) Translates to: LPFKVKAPIKCQIRRDCFTMGIF*CLNSNI Trigger: AATGTTAGAGTTCAAGCACAAGAAAATGCCCATGGT...GAAACAATCTCTTCTAATTTGGCACTTGATAGGTGCTTTGACTTTAAAAGGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322831.6
CDS TCA 72 bp	AGGACACTTTTTCTAACCAAGCTGCTTATGTATAGTTaGTCAGTTTACCATCTTCTCAGGAGCAAAAAGTGT	+
Preference number: 6 (lower is better) Translates to: RTLFLTKLLMYS*SVYHLLRSKKC Trigger: ACACTTTTTGCTCCTGAGAAGATGGTAAACTGATCAACTATACATAAGCAGCTTGGTTAGAAAAAGTGTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000481507.5