RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZCCHC14 (Homo sapiens)

Ensembl gene IDs: ENSG00000140948

Ensembl transcript IDs: ENST00000268616.9, ENST00000561928.1, ENST00000565193.1, ENST00000568020.6, ENST00000671377.2

Found 930 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCTCGACTTCGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATaGACGTTCAAGACGACTGGCAGCTCCGCAGAGGCCTTCGCTGCT +
Preference number: 1 (lower is better)
Translates to: FSTSDGLPGDVTRRP*TFKTTGSSAEAFAA
Trigger: AGCAGCGAAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGAAGTCGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 90 bp ACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTaGTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAG +
Preference number: 1 (lower is better)
Translates to: TRRPWWLLERCIRAR*WQTLKSKCAAPSGK
Trigger: CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp CGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCTaGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGAGG +
Preference number: 1 (lower is better)
Translates to: RRPWWLLERCIRARC*QTLKSKCAAPSGKR
Trigger: CCTCTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 90 bp GCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTaGGGCCGCGGCGGATGGCCACTGCCCCCTTCCTTGGTGAACAGT +
Preference number: 1 (lower is better)
Translates to: ARKTHTCDEGLLQRT*GRGGWPLPPSLVNS
Trigger: ACTGTTCACCAAGGAAGGGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 90 bp AGGAGGGCCAGTGATGGCAATGCTCTTCGGGAGACATGGCGTCTCTaGACTGCAACCAAAAGTGGAGGTGGCCGATCTCACCAGCCACAG +
Preference number: 1 (lower is better)
Translates to: RRASDGNALRETWRL*TATKSGGGRSHQPQ
Trigger: CTGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATTGCCATCACTGGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 90 bp CCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGAGGCCTTCGCTaGTGGGAACACAGCCGTGACAGTGTCGGAACTCATCTACCTCAA +
Preference number: 1 (lower is better)
Translates to: PMHVQDDWQLRRGLR*WEHSRDSVGTHLPQ
Trigger: TTGAGGTAGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 90 bp GAGATGCATCCGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTaGGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATT +
Preference number: 1 (lower is better)
Translates to: EMHPSSLLANSQVQV*GSLRKEASRMGGSI
Trigger: AATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp ATGCACGTTCAAGACGACTGGCAGCTCCGCAGAGGCCTTCGCTGCTaGGAACACAGCCGTGACAGTGTCGGAACTCATCTACCTCAACGC +
Preference number: 1 (lower is better)
Translates to: MHVQDDWQLRRGLRC*EHSRDSVGTHLPQR
Trigger: GCGTTGAGGTAGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTGCAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp AGCTCCTACTTACAGCTGACGATTCTCGACTTCGGACGGCCTCCCTaGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAG +
Preference number: 1 (lower is better)
Translates to: SSYLQLTILDFGRPP*RCHTPPMHVQDDWQ
Trigger: CTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 90 bp GTTCTTGGGGAGCCCGTGGGAGATAAAGCAACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCACAGCCACTCACAGAGCCGCGCTGT +
Preference number: 1 (lower is better)
Translates to: VLGEPVGDKATCKLC*GRAASSQPLTEPRC
Trigger: ACAGCGCGGCTCTGTGAGTGGCTGTGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp TCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTaGCCGATCTCACCAGCCACAGAGATGCCCACTAGGCGAGTTCTG +
Preference number: 1 (lower is better)
Translates to: SSGDMASLHCNQKWR*PISPATEMPTRRVL
Trigger: CAGAACTCGCCTAGTGGGCATCTCTGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp CAATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTaGAGGTGGCCGATCTCACCAGCCACAGAGATGCCCACTAGGCGA +
Preference number: 1 (lower is better)
Translates to: QCSSGDMASLHCNQK*RWPISPATEMPTRR
Trigger: TCGCCTAGTGGGCATCTCTGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp TGTGAGCCTAGGAGGGCCAGTGATGGCAATGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCCGATCTCAC +
Preference number: 1 (lower is better)
Translates to: CEPRRASDGNALRET*RLCTATKSGGGRSH
Trigger: GTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATTGCCATCACTGGCCCTCCTAGGCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 90 bp CAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATaGATCCGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCG +
Preference number: 1 (lower is better)
Translates to: QNALQTRRPWWLLER*IRARCWQTLKSKCA
Trigger: CGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp AAGTCGACATTTTCCCTAGCCCAGGGGTGTCAGGAGTCCGGCGGGTaGAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGAC +
Preference number: 1 (lower is better)
Translates to: KSTFSLAQGCQESGG*NSTWRTPSSVLDSD
Trigger: GTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTGACACCCCTGGGCTAGGGAAAATGTCGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp TCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCAAACTCTGCTGAGGACGTGCAGCAT +
Preference number: 1 (lower is better)
Translates to: SASDKPRGWRFLGSP*EIKQLANSAEDVQH
Trigger: ATGCTGCACGTCCTCAGCAGAGTTTGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp GATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTaGAGAGATGCATCCGAGCTCGCTGCTGGCAAACTCTCAAGTCCA +
Preference number: 1 (lower is better)
Translates to: DDRKTLFRRADLGGF*RDASELAAGKLSSP
Trigger: TGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp AATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTaGAGGTTCTTGGGGAGCCCGTGGGAGATAAAGCAACTTGCAAAC +
Preference number: 1 (lower is better)
Translates to: NVCLRCESASDKPRG*RFLGSPWEIKQLAN
Trigger: GTTTGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 90 bp CTACAAAGGGCAAAGACGTGGCACATGGCCAGTGCCACACCTACCTaGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATG +
Preference number: 1 (lower is better)
Translates to: LQRAKTWHMASATPT*LPQHSETDHTFRKM
Trigger: CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGGCACTGGCCATGTGCCACGTCTTTGCCCTTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR TCA 90 bp CCCCTCGAGAGGTCATTTGTAGTGGAAGATAGGGCTCAAAGCCACTaGCTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATG +
Preference number: 1 (lower is better)
Translates to: PLERSFVVEDRAQSH*LAGKKDTLKALTTM
Trigger: CATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAGCCCTATCTTCCACTACAAATGACCTCTCGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 90 bp CTAAAACCTCTGTTGCGTCCTAAGTCGAGTAGCCTCTGCTGGTGCTaGCTCTTTCAATATGGATTATTGGAGTCTCTTGCACTGACTGTT +
Preference number: 1 (lower is better)
Translates to: LKPLLRPKSSSLCWC*LFQYGLLESLALTV
Trigger: AACAGTCAGTGCAAGAGACTCCAATAATCCATATTGAAAGAGTCAGCACCAGCAGAGGCTACTCGACTTAGGACGCAACAGAGGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 90 bp ACTTTCTGCTTTAGTTTCTATGAAGTTAGGAACTGCTCTTCAAATTaGACGCTCACATCACAAGGCCTCATTCTAGGGTATTCTTCTGAT +
Preference number: 1 (lower is better)
Translates to: TFCFSFYEVRNCSSN*TLTSQGLILGYSSD
Trigger: ATCAGAAGAATACCCTAGAATGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGAAACTAAAGCAGAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 90 bp TTTAAGTCCGTAAATTTCAGACAAAAGGCTTTCATTTCCGTGGGTTaGAATTTAGAGATCTACAGTGAGGACTTTTATTACTACCTAACC +
Preference number: 1 (lower is better)
Translates to: FKSVNFRQKAFISVG*NLEIYSEDFYYYLT
Trigger: GGTTAGGTAGTAATAAAAGTCCTCACTGTAGATCTCTAAATTTCAACCCACGGAAATGAAAGCCTTTTGTCTGAAATTTACGGACTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCGCAGAGGCCTTCGCTaGTGGGAACACAGCCGTGAC +
Preference number: 2 (lower is better)
Translates to: LQTRRPWWLLERCIRARCRRGLR*WEHSRD
Trigger: GTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCA +
Preference number: 2 (lower is better)
Translates to: VMRACYNAREAAADGHCPTCKLC*GRAASS
Trigger: TGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCGCAGAGGCCTTCGCTaGTGGGAACACAGCCGTGAC +
Preference number: 2 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFRRGLR*WEHSRD
Trigger: GTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCA +
Preference number: 2 (lower is better)
Translates to: RTASLEMSHAAHARSRRLTCKLC*GRAASS
Trigger: TGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGT...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGTCACACGCCGCCCATaGACGTTCAAGACGACTGGC +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELAVTRRP*TFKTTG
Trigger: GCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGAC...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCTTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCA +
Preference number: 2 (lower is better)
Translates to: VMRACYNAREAAADGHCPFLGSP*EIKQLA
Trigger: TGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAA...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGATAAGCCTCGGGGTTaGAGGTTCTTGGGGAGCCCG +
Preference number: 2 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFDKPRG*RFLGSP
Trigger: CGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCAGAGGCCTTCGCTGCTaGGAACACAGCCGTGACAGT +
Preference number: 2 (lower is better)
Translates to: LQTRRPWWLLERCIRARCRGLRC*EHSRDS
Trigger: ACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 90 bp TTCCCTAGCCCAGGGGTGTCAGGAGTCCGGCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: FPSPGVSGVRRVELH*ENSKLGSRFRPRVA
Trigger: AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTGACACCCCTGGGCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGTGCATCCGAGCTCGCTaGTGGCAAACTCTCAAGTCC +
Preference number: 2 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMCIRAR*WQTLKS
Trigger: GGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCA...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTAGAGGCCTTCGCTGCTaGGAACACAGCCGTGACAGT +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELARGLRC*EHSRDS
Trigger: ACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCA +
Preference number: 2 (lower is better)
Translates to: LQTRRPWWLLERCIRARCTCKLC*GRAASS
Trigger: TGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCACTGCAACCAAAAGTaGAGGTGGCCGATCTCACCA +
Preference number: 2 (lower is better)
Translates to: CESASDKPRGWRFLGSPWHCNQK*RWPISP
Trigger: TGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGGCCTCACGGATGGGTaGTTCCATTTTCTCTGCGCT +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELAGLTDG*FHFLCA
Trigger: AGCGCAGAGAAAATGGAACCACCCATCCGTGAGGCC...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 90 bp TCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGCCCTGGAATaGACGTGTGAGCCTAGGAGGGCCAGTGATGGCAATGCTCTTCGG +
Preference number: 2 (lower is better)
Translates to: SKLGSRFRPRVAALE*TCEPRRASDGNALR
Trigger: CCGAAGAGCATTGCCATCACTGGCCCTCCTAGGCTCACACGTCAATTCCAGGGCAGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGGAGACATGGCGTCTCTaGACTGCAACCAAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMETWRL*TATKSG
Trigger: TCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTC...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGTTCTCAGAGGAGTTTaGCTCCCAGAACCGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELAVLRGV*LPEPQR
Trigger: TCTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAAC...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACTCAAAGCCACTGACTaGCTGGGAAGAAAGATACTC +
Preference number: 2 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSALKATD*LGRKIL
Trigger: GAGTATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCAAGAGGCCTCACGGATaGGTGGTTCCATTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: LQTRRPWWLLERCIRARCKRPHG*VVPFSL
Trigger: CAGAGAAAATGGAACCACCCATCCGTGAGGCCTCTT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 90 bp CTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTaGGGGAGCCCGTGGGAGATAAAGCAACTTGCAAACTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: LRCESASDKPRGWRF*GSPWEIKQLANSAE
Trigger: CTCAGCAGAGTTTGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGTGGAGTCTCTTGCACTaGCTGTTCTCAGAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: CESASDKPRGWRFLGSPWWSLLH*LFSEEF
Trigger: AAACTCCTCTGAGAACAGTCAGTGCAAGAGACTCCA...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCAACCAAAACCAGACTTaGACAGATCTCGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: LQTRRPWWLLERCIRARCNQNQT*TDLAAL
Trigger: GAGAGCTGCGAGATCTGTGCAAGTCTGGTTTTGGTT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTTTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCA +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELAFLGSP*EIKQLA
Trigger: TGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAA...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCAGCCTCTGCTGGTGCTaGCTCTTTCAATATGGATTA +
Preference number: 2 (lower is better)
Translates to: LQTRRPWWLLERCIRARCSLCWC*LFQYGL
Trigger: TAATCCATATTGAAAGAGTCAGCACCAGCAGAGGCT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAATACTCTCAAAGCTTTaGCGACTATGGATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAILSKL*RLWILW
Trigger: CCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTAT...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACAGGAGTCCGGCGGGTaGAACTCCACTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGQESGG*NSTWRT
Trigger: AGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCAGTGCCACACCTACCTaGTTGCCACAGCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVSATPT*LPQHSE
Trigger: TTCAGAATGCTGTGGCAACCAGGTAGGTGTGGCACT...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR TCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTAACTGCTCTTCAAATTaGACGCTCACATCACAAGGC +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELANCSSN*TLTSQG
Trigger: GCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGATTATTGGAGTCTCTTaGACTGACTGTTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKIIGVS*TDCSQR
Trigger: CCTCTGAGAACAGTCAGTGCAAGAGACTCCAATAAT...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCCTCAAAGCCACTGACTaGCTGGGAAGAAAGATACTC +
Preference number: 2 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVLKATD*LGRKIL
Trigger: GAGTATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAG...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCATTCGGACGGCCTCCCTaGAGATGTCACACGCCGCCC +
Preference number: 2 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAFGRPP*RCHTPP
Trigger: GGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGAA...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCAGCCTCTGTTCCAGCTaGGTGATGTTTAGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVSLCSS*VMFRQS
Trigger: ACTTTGCCTAAACATCACCCAGCTGGAACAGAGGCT...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR TCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGGCAATAAATCGAGTTTaGTGCACTTCTACGCTAGAT +
Preference number: 2 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKAINRV*CTSTLD
Trigger: ATCTAGCGTAGAAGTGCATCAAACTCGATTTATTGC...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCTTCTGTGTTTTCAGATaGGGAAGTCTGATGACCGCA +
Preference number: 2 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVFCVFR*GSLMTA
Trigger: TGCGGTCATCAGACTTCCTCATCTGAAAACACAGAA...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTATTATTGGAGTCTCTTaGACTGACTGTTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELAIIGVS*TDCSQR
Trigger: CCTCTGAGAACAGTCAGTGCAAGAGACTCCAATAAT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGGTCACACGCCGCCCATaGACGTTCAAGACGACTGGC +
Preference number: 2 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLVTRRP*TFKTTG
Trigger: GCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGAC...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAAACCAAAAGTGGAGGTaGCCGATCTCACCAGCCACA +
Preference number: 2 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGNQKWR*PISPAT
Trigger: TGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTT...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGGTGGAACTCCACTTaGAGAACTCCAAGCTCGGTT +
Preference number: 2 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGGWNST*RTPSSV
Trigger: AACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCC...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAACAGGAGTCCGGCGGGTaGAACTCCACTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKQESGG*NSTWRT
Trigger: AGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTG...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR TCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGTTCATTTCCGTGGGTTaGAATTTAGAGATCTACAGT +
Preference number: 2 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKFISVG*NLEIYS
Trigger: ACTGTAGATCTCTAAATTTCAACCCACGGAAATGAA...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAACTGGGAACACAGCCGTaGCAGTGTCGGAACTCATCT +
Preference number: 2 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKLGTQP*QCRNSS
Trigger: AGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAG...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCTTCCTTATGTCTCCATaGCTTAATAACGTTCTGTTG +
Preference number: 2 (lower is better)
Translates to: LQTRRPWWLLERCIRARCFLMSP*LNNVLL
Trigger: CAACAGAACGTTATTAAGCCATGGAGACATAAGGAA...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMALRET*RLCTAT
Trigger: GGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGC...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGCAGACGCGCCGACCTTaGTGGCTTTTGGAGAGATGC +
Preference number: 2 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMQTRRP*WLLERC
Trigger: GCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTG...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR TCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGCTCCTACTTACAGCTaGCGATTCTCGACTTCGGAC +
Preference number: 2 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKAPTYS*RFSTSD
Trigger: GTCCGAAGTCGAGAATCGTCAGCTGTAAGTAGGAGC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGATGGCGTCTCTGCACTaGAACCAAAAGTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: FVHVRLTHVMRACYNAREMASLH*NQKWRW
Trigger: CCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCAT...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGATTATTGGAGTCTCTTaGACTGACTGTTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMIIGVS*TDCSQR
Trigger: CCTCTGAGAACAGTCAGTGCAAGAGACTCCAATAAT...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCTGCAAAATCCCAACTaGAAGATTTTACCAATCAGT +
Preference number: 2 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFLQNPN*KILPIS
Trigger: ACTGATTGGTAAAATCTTGCAGTTGGGATTTTGCAG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGTGGCTTTTGGAGAGATaGATCCGAGCTCGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLWLLER*IRARCW
Trigger: CCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCA...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTTTCCTTATGTCTCCATaGCTTAATAACGTTCTGTTG +
Preference number: 2 (lower is better)
Translates to: LFRRADLGGFWRDASELAFLMSP*LNNVLL
Trigger: CAACAGAACGTTATTAAGCCATGGAGACATAAGGAA...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCACTGCAACCAAAAGTaGAGGTGGCCGATCTCACCA +
Preference number: 2 (lower is better)
Translates to: SIFSALCSSYLQLTILDFHCNQK*RWPISP
Trigger: TGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACAGGAGTCCGGCGGGTaGAACTCCACTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAQESGG*NSTWRT
Trigger: AGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGGGCCTCACGGATGGGTaGTTCCATTTTCTCTGCGCT +
Preference number: 2 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMGLTDG*FHFLCA
Trigger: AGCGCAGAGAAAATGGAACCACCCATCCGTGAGGCC...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGACCTTGGTGGCTTTTaGAGAGATGCATCCGAGCTC +
Preference number: 2 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKDLGGF*RDASEL
Trigger: GAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGACGCGCCGACCTTGGTaGCTTTTGGAGAGATGCATC +
Preference number: 2 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLTRRPW*LLERCI
Trigger: GATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGT...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR TCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGAGGGCTCAAAGCCACTaGCTGGCTGGGAAGAAAGAT +
Preference number: 2 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLRAQSH*LAGKKD
Trigger: ATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAGCCCT...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR TCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTCTGGGAACACAGCCGTaGCAGTGTCGGAACTCATCT +
Preference number: 2 (lower is better)
Translates to: ETLISDRLQRAKTWHMASLGTQP*QCRNSS
Trigger: AGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAG...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR GCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGATGGCGTCTCTGCACTaGAACCAAAAGTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMMASLH*NQKWRW
Trigger: CCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCAT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGGGGTGGAACTCCACTTaGAGAACTCCAAGCTCGGTT +
Preference number: 2 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLGWNST*RTPSSV
Trigger: AACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCC...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGTTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCA +
Preference number: 2 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMFLGSP*EIKQLA
Trigger: TGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAA...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCAGCTCTCGGGTGTGTaGCCTCTTCCAGAGTCCTAC +
Preference number: 2 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTQLSGV*PLPESY
Trigger: GTAGGACTCTGGAAGAGGCCACACACCCGAGAGCTG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGAAGAGGCCTCACGGATaGGTGGTTCCATTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMKRPHG*VVPFSL
Trigger: CAGAGAAAATGGAACCACCCATCCGTGAGGCCTCTT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAGACCTTGGTGGCTTTTaGAGAGATGCATCCGAGCTC +
Preference number: 2 (lower is better)
Translates to: SLFVHVRLTHVMRACYNADLGGF*RDASEL
Trigger: GAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTC...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCAACTGCTCTTCAAATTaGACGCTCACATCACAAGGC +
Preference number: 2 (lower is better)
Translates to: SIFSALCSSYLQLTILDFNCSSN*TLTSQG
Trigger: GCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGTTCTCAGAGGAGTTTaGCTCCCAGAACCGCAGAGA +
Preference number: 2 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLVLRGV*LPEPQR
Trigger: TCTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAAC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAAAGAGGCCTCACGGATaGGTGGTTCCATTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAKRPHG*VVPFSL
Trigger: CAGAGAAAATGGAACCACCCATCCGTGAGGCCTCTT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGAGCCTCTGCTGGTGCTaGCTCTTTCAATATGGATTA +
Preference number: 2 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLSLCWC*LFQYGL
Trigger: TAATCCATATTGAAAGAGTCAGCACCAGCAGAGGCT...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGATACTCTCAAAGCTTTaGCGACTATGGATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: FVHVRLTHVMRACYNAREILSKL*RLWILW
Trigger: CCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTAT...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGGACTGTATCATTGTTaGAATGTCTGTCTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FVHVRLTHVMRACYNAREGLYHC*NVCLRC
Trigger: ACACCTGAGACAGACATTTCAACAATGATACAGTCC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGAACTGCTCTTCAAATTaGACGCTCACATCACAAGGC +
Preference number: 2 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMNCSSN*TLTSQG
Trigger: GCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRALRET*RLCTAT
Trigger: GGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGTTCTCAGAGGAGTTTaGCTCCCAGAACCGCAGAGA +
Preference number: 2 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTVLRGV*LPEPQR
Trigger: TCTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAAC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGTTCCTTGGTGAACAGTaGAGCAATGTTAACCTTTGG +
Preference number: 2 (lower is better)
Translates to: FVHVRLTHVMRACYNAREFLGEQ*SNVNLW
Trigger: CCAAAGGTTAACATTGCTCCACTGTTCACCAAGGAA...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGCAATAAATCGAGTTTaGTGCACTTCTACGCTAGAT +
Preference number: 2 (lower is better)
Translates to: FVHVRLTHVMRACYNAREAINRV*CTSTLD
Trigger: ATCTAGCGTAGAAGTGCATCAAACTCGATTTATTGC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTTTCTGTGTTTTCAGATaGGGAAGTCTGATGACCGCA +
Preference number: 2 (lower is better)
Translates to: ETLISDRLQRAKTWHMASFCVFR*GSLMTA
Trigger: TGCGGTCATCAGACTTCCTCATCTGAAAACACAGAA...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: HSSVVQSLKIPEISANHFALRET*RLCTAT
Trigger: GGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCACTCAAAGCCACTGACTaGCTGGGAAGAAAGATACTC +
Preference number: 2 (lower is better)
Translates to: SMKLGTALQIERSHHKASLKATD*LGRKIL
Trigger: GAGTATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAG...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACCAGCTCTCGGGTGTGTaGCCTCTTCCAGAGTCCTAC +
Preference number: 2 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNQLSGV*PLPESY
Trigger: GTAGGACTCTGGAAGAGGCCACACACCCGAGAGCTG...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTATACTCTCAAAGCTTTaGCGACTATGGATTCTCTGG +
Preference number: 2 (lower is better)
Translates to: ETLISDRLQRAKTWHMASILSKL*RLWILW
Trigger: CCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTAT...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR GCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAACTGCAAAATCCCAACTaGAAGATTTTACCAATCAGT +
Preference number: 2 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKLQNPN*KILPIS
Trigger: ACTGATTGGTAAAATCTTGCAGTTGGGATTTTGCAG...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGTTCCTTATGTCTCCATaGCTTAATAACGTTCTGTTG +
Preference number: 2 (lower is better)
Translates to: FVHVRLTHVMRACYNAREFLMSP*LNNVLL
Trigger: CAACAGAACGTTATTAAGCCATGGAGACATAAGGAA...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTATGGCGTCTCTGCACTaGAACCAAAAGTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: HSSVVQSLKIPEISANHFMASLH*NQKWRW
Trigger: CCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCAT...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGAGACATGGCGTCTCTaGACTGCAACCAAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRETWRL*TATKSG
Trigger: TCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAACCAAAAGTGGAGGTaGCCGATCTCACCAGCCACA +
Preference number: 2 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNNQKWR*PISPAT
Trigger: TGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR TCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCATTCATTTCCGTGGGTTaGAATTTAGAGATCTACAGT +
Preference number: 2 (lower is better)
Translates to: SMKLGTALQIERSHHKASFISVG*NLEIYS
Trigger: ACTGTAGATCTCTAAATTTCAACCCACGGAAATGAA...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR GCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAACCAAAACCAGACTTaGACAGATCTCGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNNQNQT*TDLAAL
Trigger: GAGAGCTGCGAGATCTGTGCAAGTCTGGTTTTGGTT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 90 bp TGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTaGGGCAATAAAGGACCTAGAATTCTAAGTACTGAATTAAAAATA +
Preference number: 2 (lower is better)
Translates to: CAPRQSLWYKLTVLT*GNKGPRILSTELKI
Trigger: TATTTTTAATTCAGTACTTAGAATTCTAGGTCCTTTATTGCCCAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR GCA 72 bp TCGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATaGACGTTCAAGACGACTGGCAGCTCCGCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: SDGLPGDVTRRP*TFKTTGSSAEA
Trigger: GGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCGGGGTTGGAGGTTCTaGGGGAGCCCGTGGGAGATA +
Preference number: 3 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKRGWRF*GSPWEI
Trigger: TATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 72 bp CCGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTaGGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGT +
Preference number: 3 (lower is better)
Translates to: PSSLLANSQVQV*GSLRKEASRMG
Trigger: ACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp AGATGTCACACGCCGCCCATGCACGTTCAAGACGACTaGCAGCTCCGCAGAGGCCTTCGCTGCTGGGAACAC +
Preference number: 3 (lower is better)
Translates to: RCHTPPMHVQDD*QLRRGLRCWEH
Trigger: GTGTTCCCAGCAGCGAAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGTGTTCTCAGAGGAGTTaGGCTCCCAGAACCGCAGAG +
Preference number: 3 (lower is better)
Translates to: RTASLEMSHAAHARSRRLCSQRS*APRTAE
Trigger: CTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACA...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 72 bp ACTCACACATGTGATGAGGGCTTGTTACAACGCACGTaGGGCCGCGGCGGATGGCCACTGCCCCCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: THTCDEGLLQRT*GRGGWPLPPSL
Trigger: CAAGGAAGGGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGT +
Preference number: 3 (lower is better)
Translates to: LQTRRPWWLLERCIRARCRVELH*ENSKLG
Trigger: ACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 72 bp GTTCAAGACGACTGGCAGCTCCGCAGAGGCCTTCGCTaGTGGGAACACAGCCGTGACAGTGTCGGAACTCAT +
Preference number: 3 (lower is better)
Translates to: VQDDWQLRRGLR*WEHSRDSVGTH
Trigger: ATGAGTTCCGACACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp TCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTaGAGGTGGCCGATCTCACCAGCCACAGAGATGCCC +
Preference number: 3 (lower is better)
Translates to: SGDMASLHCNQK*RWPISPATEMP
Trigger: GGGCATCTCTGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp CAGGGGTGTCAGGAGTCCGGCGGGTGGAACTCCACTTaGAGAACTCCAAGCTCGGTTCTCGATTCAGACCAC +
Preference number: 3 (lower is better)
Translates to: QGCQESGGWNST*RTPSSVLDSDH
Trigger: GTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTGACACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp TTTTCCCTAGCCCAGGGGTGTCAGGAGTCCGGCGGGTaGAACTCCACTTGGAGAACTCCAAGCTCGGTTCTC +
Preference number: 3 (lower is better)
Translates to: FSLAQGCQESGG*NSTWRTPSSVL
Trigger: GAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTGACACCCCTGGGCTAGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp CAAGACGACTGGCAGCTCCGCAGAGGCCTTCGCTGCTaGGAACACAGCCGTGACAGTGTCGGAACTCATCTA +
Preference number: 3 (lower is better)
Translates to: QDDWQLRRGLRC*EHSRDSVGTHL
Trigger: TAGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCGGAGCTGCCAGTCGTCTTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGTGTTCTCAGAGGAGTTaGGCTCCCAGAACCGCAGAG +
Preference number: 3 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMCSQRS*APRTAE
Trigger: CTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACA...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CAA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCATACTAAAACCTCTGTaGCGTCCTAAGTCGAGTAGC +
Preference number: 3 (lower is better)
Translates to: VMRACYNAREAAADGHCPILKPL*RPKSSS
Trigger: GCTACTCGACTTAGGACGCAACAGAGGTTTTAGTAT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 72 bp TGGCAATGCTCTTCGGGAGACATGGCGTCTCTGCACTaGAACCAAAAGTGGAGGTGGCCGATCTCACCAGCC +
Preference number: 3 (lower is better)
Translates to: WQCSSGDMASLH*NQKWRWPISPA
Trigger: GGCTGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 72 bp CCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTaGTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCC +
Preference number: 3 (lower is better)
Translates to: PWWLLERCIRAR*WQTLKSKCAAP
Trigger: GGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 72 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATaGATCCGAGCTCGCTGCTGGCAAACTCTCAAGTCC +
Preference number: 3 (lower is better)
Translates to: LQTRRPWWLLER*IRARCWQTLKS
Trigger: GGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp GACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTaGCCGATCTCACCAGCCACAGAGATGCCCACTAGG +
Preference number: 3 (lower is better)
Translates to: DMASLHCNQKWR*PISPATEMPTR
Trigger: CCTAGTGGGCATCTCTGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp AGGAGGGCCAGTGATGGCAATGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: RRASDGNALRET*RLCTATKSGGG
Trigger: GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATTGCCATCACTGGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp TTACAGCTGACGATTCTCGACTTCGGACGGCCTCCCTaGAGATGTCACACGCCGCCCATGCACGTTCAAGAC +
Preference number: 3 (lower is better)
Translates to: LQLTILDFGRPP*RCHTPPMHVQD
Trigger: GTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGAAGTCGAGAATCGTCAGCTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp TGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCTaGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: WWLLERCIRARC*QTLKSKCAAPS
Trigger: GGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp CTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTaGAGGTTCTTGGGGAGCCCGTGGGAGATAAAGCAA +
Preference number: 3 (lower is better)
Translates to: LRCESASDKPRG*RFLGSPWEIKQ
Trigger: TTGCTTTATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp AAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTaGAGAGATGCATCCGAGCTCGCTGCTGGCAAACTC +
Preference number: 3 (lower is better)
Translates to: KTLFRRADLGGF*RDASELAAGKL
Trigger: GAGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGAACTGCTACAAGTGCTaGGAGGAGGGAAGGAAATAC +
Preference number: 3 (lower is better)
Translates to: CESASDKPRGWRFLGSPWNCYKC*EEGRKY
Trigger: GTATTTCCTTCCCTCCTCCAAGCACTTGTAGCAGTT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGAACTGCTCTTCAAATaGAACGCTCACATCACAAGG +
Preference number: 3 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAELLFK*NAHITR
Trigger: CCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTC...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 72 bp GAGCCCGTGGGAGATAAAGCAACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCACAGCCACTCACAGAG +
Preference number: 3 (lower is better)
Translates to: EPVGDKATCKLC*GRAASSQPLTE
Trigger: CTCTGTGAGTGGCTGTGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGTTGCTTTATCTCCCACGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR GCA 72 bp AGTGATGGCAATGCTCTTCGGGAGACATGGCGTCTCTaGACTGCAACCAAAAGTGGAGGTGGCCGATCTCAC +
Preference number: 3 (lower is better)
Translates to: SDGNALRETWRL*TATKSGGGRSH
Trigger: GTGAGATCGGCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATTGCCATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp GATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCAAACTCTGCTGAGGAC +
Preference number: 3 (lower is better)
Translates to: DKPRGWRFLGSP*EIKQLANSAED
Trigger: GTCCTCAGCAGAGTTTGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp ACCAGACTTGCACAGATCTCGCAGCTCTCGGGTGTGTaGCCTCTTCCAGAGTCCTACCACTTCCCACTGTTT +
Preference number: 3 (lower is better)
Translates to: TRLAQISQLSGV*PLPESYHFPLF
Trigger: AAACAGTGGGAAGTGGTAGGACTCTGGAAGAGGCCACACACCCGAGAGCTGCGAGATCTGTGCAAGTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGTAGCTGCCCTGGAATaGACGTGTGAGCCTAGGAGG +
Preference number: 3 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGVAALE*TCEPRR
Trigger: CCTCCTAGGCTCACACGTCAATTCCAGGGCAGCTAC...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 72 bp CCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTaGCGATTCTCGACTTCGGACGGCCTCCCTGGAGAT +
Preference number: 3 (lower is better)
Translates to: PFSLRCVAPTYS*RFSTSDGLPGD
Trigger: ATCTCCAGGGAGGCCGTCCGAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CCA 72 bp GCAAAGACGTGGCACATGGCCAGTGCCACACCTACCTaGTTGCCACAGCATTCTGAAACAGACCACACTTTC +
Preference number: 3 (lower is better)
Translates to: AKTWHMASATPT*LPQHSETDHTF
Trigger: GAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGGCACTGGCCATGTGCCACGTCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CAA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGATGTTCTCAGAGGAGTTaGGCTCCCAGAACCGCAGAG +
Preference number: 3 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGCSQRS*APRTAE
Trigger: CTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACA...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCGTAGCTGCCCTGGAATaGACGTGTGAGCCTAGGAGG +
Preference number: 3 (lower is better)
Translates to: SIFSALCSSYLQLTILDFVAALE*TCEPRR
Trigger: CCTCCTAGGCTCACACGTCAATTCCAGGGCAGCTAC...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTAGGACTGTATCATTGTaGAAATGTCTGTCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFRTVSL*KCLSQV
Trigger: CACCTGAGACAGACATTTCAACAATGATACAGTCCT...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGTCAGACGCGCCGACCTaGGTGGCTTTTGGAGAGATG +
Preference number: 3 (lower is better)
Translates to: FVHVRLTHVMRACYNARESDAPT*VAFGEM
Trigger: CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGA...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGCTTTCCTCACAACCTaGAAGACCATCAGTCATCAT +
Preference number: 3 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVAFLTT*KTISHH
Trigger: ATGATGACTGATGGTCTTCAAGGTTGTGAGGAAAGC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGT +
Preference number: 3 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMRVELH*ENSKLG
Trigger: ACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCG...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CAA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGTTTCAATATGGATTATaGGAGTCTCTTGCACTGACT +
Preference number: 3 (lower is better)
Translates to: CESASDKPRGWRFLGSPWFQYGL*ESLALT
Trigger: AGTCAGTGCAAGAGACTCCAATAATCCATATTGAAA...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGTCAGACGCGCCGACCTaGGTGGCTTTTGGAGAGATG +
Preference number: 3 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMSDAPT*VAFGEM
Trigger: CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGA...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CAA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGT +
Preference number: 3 (lower is better)
Translates to: ETLISDRLQRAKTWHMASRVELH*ENSKLG
Trigger: ACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCG...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR CCA 72 bp TTGGAGTCTCTTGCACTGACTGTTCTCAGAGGAGTTTaGCTCCCAGAACCGCAGAGATTTACATCAGGGTAC +
Preference number: 3 (lower is better)
Translates to: LESLALTVLRGV*LPEPQRFTSGY
Trigger: GTACCCTGATGTAAATCTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACAGTCAGTGCAAGAGACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCAACTGCTACAAGTGCTaGGAGGAGGGAAGGAAATAC +
Preference number: 3 (lower is better)
Translates to: SIFSALCSSYLQLTILDFNCYKC*EEGRKY
Trigger: GTATTTCCTTCCCTCCTCCAAGCACTTGTAGCAGTT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGAACTGCTCTTCAAATaGAACGCTCACATCACAAGG +
Preference number: 3 (lower is better)
Translates to: FVHVRLTHVMRACYNAREELLFK*NAHITR
Trigger: CCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 72 bp CTGTTGCGTCCTAAGTCGAGTAGCCTCTGCTGGTGCTaGCTCTTTCAATATGGATTATTGGAGTCTCTTGCA +
Preference number: 3 (lower is better)
Translates to: LLRPKSSSLCWC*LFQYGLLESLA
Trigger: TGCAAGAGACTCCAATAATCCATATTGAAAGAGTCAGCACCAGCAGAGGCTACTCGACTTAGGACGCAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGGCAATAAATCGAGTTaGATGCACTTCTACGCTAGA +
Preference number: 3 (lower is better)
Translates to: FVHVRLTHVMRACYNAREGNKSS*MHFYAR
Trigger: TCTAGCGTAGAAGTGCATCAAACTCGATTTATTGCC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCGGCAATAAATCGAGTTaGATGCACTTCTACGCTAGA +
Preference number: 3 (lower is better)
Translates to: SIFSALCSSYLQLTILDFGNKSS*MHFYAR
Trigger: TCTAGCGTAGAAGTGCATCAAACTCGATTTATTGCC...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGATACTCTCAAAGCTTaGACGACTATGGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: FVHVRLTHVMRACYNAREDTLKA*TTMDSL
Trigger: CAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 72 bp AGGTCATTTGTAGTGGAAGATAGGGCTCAAAGCCACTaGCTGGCTGGGAAGAAAGATACTCTCAAAGCTTTG +
Preference number: 3 (lower is better)
Translates to: RSFVVEDRAQSH*LAGKKDTLKAL
Trigger: CAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAGCCCTATCTTCCACTACAAATGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAATACTAAAACCTCTGTaGCGTCCTAAGTCGAGTAGC +
Preference number: 3 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAILKPL*RPKSSS
Trigger: GCTACTCGACTTAGGACGCAACAGAGGTTTTAGTAT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGGATACTCTCAAAGCTTaGACGACTATGGATTCTCTG +
Preference number: 3 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLDTLKA*TTMDSL
Trigger: CAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATC...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR TCA 72 bp GTACTTGAAAGGGTCAGTATGTTCTGTGTTTTCAGATaGGGAAGTCTGATGACCGCAAAACGCTCTTCAGAC +
Preference number: 3 (lower is better)
Translates to: VLERVSMFCVFR*GSLMTAKRSSD
Trigger: GTCTGAAGAGCGTTTTGCGGTCATCAGACTTCCTCATCTGAAAACACAGAACATACTGACCCTTTCAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAGGCAATAAATCGAGTTaGATGCACTTCTACGCTAGA +
Preference number: 3 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAGNKSS*MHFYAR
Trigger: TCTAGCGTAGAAGTGCATCAAACTCGATTTATTGCC...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGATGGCAGGCTCCAAGTaGAAAAGTTTCTGTTTTAAT +
Preference number: 3 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMMAGSK*KSFCFN
Trigger: ATTAAAACAGAAACTTTTCAACTTGGAGCCTGCCAT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR-3UTR CAA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCAGGACTGTATCATTGTaGAAATGTCTGTCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTRTVSL*KCLSQV
Trigger: CACCTGAGACAGACATTTCAACAATGATACAGTCCT...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGACAGGACTGTATCATaGTTGAAATGTCTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTDRTVS*LKCLSQ
Trigger: CTGAGACAGACATTTCAACAATGATACAGTCCTGTC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAATGGCAGGCTCCAAGTaGAAAAGTTTCTGTTTTAAT +
Preference number: 3 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAMAGSK*KSFCFN
Trigger: ATTAAAACAGAAACTTTTCAACTTGGAGCCTGCCAT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 72 bp AAGCTCCAATCTAGGGTTTTGGCAATAAATCGAGTTTaGTGCACTTCTACGCTAGATTTTCTATCCAGTCTA +
Preference number: 3 (lower is better)
Translates to: KLQSRVLAINRV*CTSTLDFLSSL
Trigger: TAGACTGGATAGAAAATCTAGCGTAGAAGTGCATCAAACTCGATTTATTGCCAAAACCCTAGATTGGAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR TCA 72 bp TTTAGTTTCTATGAAGTTAGGAACTGCTCTTCAAATTaGACGCTCACATCACAAGGCCTCATTCTAGGGTAT +
Preference number: 3 (lower is better)
Translates to: FSFYEVRNCSSN*TLTSQGLILGY
Trigger: ATACCCTAGAATGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGAAACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR-3UTR CAA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAGGACTGTATCATTGTaGAAATGTCTGTCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNRTVSL*KCLSQV
Trigger: CACCTGAGACAGACATTTCAACAATGATACAGTCCT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCCGGCGTGGAGGACTGTaGTGGGCGTCCCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPRRGGL*WASPWR
Trigger: CCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCG...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCAGGACCTGCACAGGCTaGTGGGGTGCGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPRTCTG*WGADAG
Trigger: GCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCACCCGCAGCTCTGCTaGATGGCTGCCCCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLHPQLC*MAAPPR
Trigger: TCGGGGCGGGGCAGCCATGCAGCAGAGCTGCGGGTG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCTTCCACCCGCAGCTCTaGTGCATGGCTGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPFHPQL*CMAAPP
Trigger: GGGCGGGGCAGCCATGCAGCAGAGCTGCGGGTGGAA...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCGGGCCTGTACCCCCATaGGGCTGGAGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPGPVPP*GWRRSW
Trigger: CCAGCTCCTCCTCCAGCCCCATGGGGGTACAGGCCC...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCCACACCACTGCTGGTaGCCAGCGGCGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWPHHCW*PAAGPR
Trigger: CCTCGGCCCCGCCGCTGGTCACCAGCAGTGGTGTGG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGGGTGCTGCCCGTGGTaGTGGGCTCCGCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAGCCPW*WAPLCE
Trigger: CTCGCAGAGCGGAGCCCAGCACCACGGGCAGCACCC...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACACCCGCAGCTCTGCTaGATGGCTGCCCCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAHPQLC*MAAPPR
Trigger: TCGGGGCGGGGCAGCCATGCAGCAGAGCTGCGGGTG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCCTGGGGTCCCGCTGCTaGTGTAAGGGGCGTGCACGA +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPLGSRC*CKGRAR
Trigger: TCGTGCACGCCCCTTACAGCAGCAGCGGGACCCCAG...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGAGCGCTTCTCCACCATaGTGCCGCCCGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWSASPP*CRPRRA
Trigger: GGCGCGGCGCGGGCGGCAGCATGGTGGAGAAGCGCT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671377.2
CDS-3UTR CCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCACGACGGGGAAGGTaGAGCCGCCGCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLARRGR*SRRRTA
Trigger: AGCAGTACGGCGGCGGCTCCACCTTCCCCGTCGTGC...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCCCGCATGGGAGCAGTaGGGCAAGGGGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFPAWEQ*GKGAAE
Trigger: CTCCGCCGCCCCCTTGCCTCACTGCTCCCATGCGGG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCAGTCCTGGGCGCGGTaGCCAGTGGCCCCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCQSWAR*PVAPQL
Trigger: CAACTGCGGGGCCACTGGTCACCGCGCCCAGGACTG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGTGCTGGGCTCCGCTCTaGGAGGACGGGATACCAGCC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLCWAPL*EDGIPA
Trigger: GGCTGGTATCCCGTCCTCGCAGAGCGGAGCCCAGCA...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATTCCACCCGCAGCTCTaGTGCATGGCTGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAFHPQL*CMAAPP
Trigger: GGGCGGGGCAGCCATGCAGCAGAGCTGCGGGTGGAA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCGGCGTGGAGGACTGTaGTGGGCGTCCCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFRRGGL*WASPWR
Trigger: CCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCGCACAGAAGCCACCCTaGAGGGGGCCCACTGGCATA +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPAQKPP*RGPTGI
Trigger: TATGCCAGTGGGCCCCCTGCAGGGTGGCTTCTGTGC...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCACGTGGAGGGGTGGCTaGTGGGAGAGGCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPTWRGG*WERQCC
Trigger: GCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGCGCAGCTCTGCTGCATaGCTGCCCCGCCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMRSSAA*LPRPDC
Trigger: GCAGTCGGGGCGGGGCAGCCATGCAGCAGAGCTGCG...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGAGGACCTGCACAGGCTaGTGGGGTGCGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKRTCTG*WGADAG
Trigger: GCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCT...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCCCACACCACTGCTGGTaGCCAGCGGCGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVPHHCW*PAAGPR
Trigger: CCTCGGCCCCGCCGCTGGTCACCAGCAGTGGTGTGG...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGTCCCGGGGCAGCTGGTaGTGGGGCTGCTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMSRGSW*WGCSTS
Trigger: GGAAGTGGAGCAGCCCCATCACCAGCTGCCCCGGGA...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCACCCGCAGCTCTGCTaGATGGCTGCCCCGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFHPQLC*MAAPPR
Trigger: TCGGGGCGGGGCAGCCATGCAGCAGAGCTGCGGGTG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCCAGGGCCGGTTGCTGTaGTGTCTTCAGCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPQGRLL*CLQHPV
Trigger: GACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTG...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGCACTCGAGCCGCAGCTaGCGCTGCAGCCACAGGACG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMHSSRS*RCSHRT
Trigger: CGTCCTGTGGCTGCAGCGGCAGCTGCGGCTCGAGTG...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCACTCGAGCCGCAGCTaGCGCTGCAGCCACAGGACG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCHSSRS*RCSHRT
Trigger: CGTCCTGTGGCTGCAGCGGCAGCTGCGGCTCGAGTG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACTGGGGTCCCGCTGCTaGTGTAAGGGGCGTGCACGA +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSALGSRC*CKGRAR
Trigger: TCGTGCACGCCCCTTACAGCAGCAGCGGGACCCCAG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCCATGGACGGCTGTTTaGAGTCCTGGGCGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLPWTAV*SPGRGD
Trigger: GTCACCGCGCCCAGGACTGCAAACAGCCGTCCATGG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCGTGGCACATGGCCAGTaGCACACCTACCTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPVAHGQ*HTYLVA
Trigger: GGCAACCAGGTAGGTGTGGCACTGGCCATGTGCCAC...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCTGCTGCCCGTGGTGCTaGGCTCCGCTCTGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCCCPWC*APLCED
Trigger: GTCCTCGCAGAGCGGAGCCCAGCACCACGGGCAGCA...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGCCGGGTGCTGCCCGTaGTGCTGGGCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVAGCCP*CWAPLC
Trigger: GCAGAGCGGAGCCCAGCACCACGGGCAGCACCCGGC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCGCAGCTCTGCTGCATaGCTGCCCCGCCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELARSSAA*LPRPDC
Trigger: GCAGTCGGGGCGGGGCAGCCATGCAGCAGAGCTGCG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGGGGCCTGTACCCCCATaGGGCTGGAGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMGPVPP*GWRRSW
Trigger: CCAGCTCCTCCTCCAGCCCCATGGGGGTACAGGCCC...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTACCTGCACAGGCTGGTaGGGTGCGGACGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELATCTGW*GADAGS
Trigger: GCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTTGCTGGGCGTCCCCGTaGCGGCCGTGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELACWASP*RPCWSP
Trigger: TGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCA...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGGCGGACGGGCGGCGTaGAGGACTGTGCTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVGGRAA*RTVLGV
Trigger: GACGCCCAGCACAGTCCTCCACGCCGCCCGTCCGCC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCGTACTGCTGGGCGCTaGCGTAGCCGCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWRTAGR*RSRCCT
Trigger: TGTGCAGCAGCGGCTACGTCAGCGCCCAGCAGTACG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATTGTTACAACGCACGTaGGGCCGCGGCGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSALLQRT*GRGGWP
Trigger: TGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGAGCCGCAGCTGCCGCTaGAGCCACAGGACGTGCACA +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMSRSCR*SHRTCT
Trigger: TGTGCACGTCCTGTGGCTGCAGCGGCAGCTGCGGCT...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGTGGCACATGGCCAGTaGCACACCTACCTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLVAHGQ*HTYLVA
Trigger: GGCAACCAGGTAGGTGTGGCACTGGCCATGTGCCAC...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGGATCTTGTGGCAGGCTaGGCAAGTGGGCAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWDLVAG*ASGQRA
Trigger: GGCGCGCTGCCCACTTGCCCAGCCTGCCACAAGATC...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCCGTGGCGGCCGTGCTaGTCTCCACGACCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMPWRPC*SPRPGP
Trigger: CGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGG...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGTGGGGGCTGGGCAGCTaGGCAACGTGGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKWGLGS*ATWPCW
Trigger: CCAACATGGCCACGTTGCCCAGCTGCCCAGCCCCCA...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCCAGGAGTCCGGCGGGTaGAACTCCACTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPQESGG*NSTWRT
Trigger: AGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTG...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGAGTAGTTGGCGTAGCTaGCAGTCAGGCCACTCGAGC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLSSWRS*QSGHSS
Trigger: GCTCGAGTGGCCTGACTGTCAGCTACGCCAACTACT...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCTGCTGTCCCTGCCATaGAGTTCTGCATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLLLSLP*SSAWVA
Trigger: TGCCACCCATGCAGAACTTCATGGCAGGGACAGCAG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGCTCTGCTGCATGGCTaGCCCGCCCCGACTGCACGG +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGALLHG*PAPTAR
Trigger: CCGTGCAGTCGGGGCGGGGCAGCCATGCAGCAGAGC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCTGGGTGACATGGAGCTaGTCTCCGAAAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPWVTWS*SPKAQR
Trigger: TCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCA...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACAGGGCCGGTTGCTGTaGTGTCTTCAGCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAQGRLL*CLQHPV
Trigger: GACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCGCACAGAAGCCACCCTaGAGGGGGCCCACTGGCATA +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCAQKPP*RGPTGI
Trigger: TATGCCAGTGGGCCCCCTGCAGGGTGGCTTCTGTGC...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCGGTCTGGTACACCCCTaGTGTCCCTGCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPGLVHP*CPCHEV
Trigger: AACTTCATGGCAGGGACAGCAGGGGTGTACCAGACC...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGTCACACGCCGCCCATaGACGTTCAAGACGACTGGC +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAVTRRP*TFKTTG
Trigger: GCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGAC...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCGCAGCGACTCCTCCGTaGAATGTGCTGATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPAATPP*NVLMCA
Trigger: TGCACACATCAGCACATTCCACGGAGGAGTCGCTGC...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGGCCCGACGTGGCTGGTaGGGGGCACTCGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMARRGW*GALEPH
Trigger: GTGTGGCTCGAGTGCCCCCCACCAGCCACGTCGGGC...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCAGACTGTGGGTGACATaGAGCTGCTCTCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPRLWVT*SCSPKA
Trigger: GGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCTGCTGGGCGTCCCCGTaGCGGCCGTGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGCWASP*RPCWSP
Trigger: TGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCA...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLALRET*RLCTAT
Trigger: GGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGC...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCAGCTCTCGGGTGTGTaGCCTCTTCCAGAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLQLSGV*PLPESY
Trigger: GTAGGACTCTGGAAGAGGCCACACACCCGAGAGCTG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGAGAGGCCTTCGCTGCTaGGAACACAGCCGTGACAGT +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLRGLRC*EHSRDS
Trigger: ACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCT...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCAGACGCGCCGACCTTaGTGGCTTTTGGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLQTRRP*WLLERC
Trigger: GCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCCGTACTGCTGGGCGCTaGCGTAGCCGCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVRTAGR*RSRCCT
Trigger: TGTGCAGCAGCGGCTACGTCAGCGCCCAGCAGTACG...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACTGCTGTCCCTGCCATaGAGTTCTGCATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSALLSLP*SSAWVA
Trigger: TGCCACCCATGCAGAACTTCATGGCAGGGACAGCAG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCACGACCAGGGCCGGTTaGTGTGCTGTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCTTRAG*CAVFST
Trigger: GGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCAGCCGCCACCGCCACTaGTGCTATAGAAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPSRHRH*CYRNCF
Trigger: AAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGTGCAGCCACAGGACGTaGACACAATGCAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKCSHRT*TQCSLA
Trigger: CGCCAGGCTGCATTGTGTGCACGTCCTGTGGCTGCA...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCCACTCGAGCCGCAGCTaGCGCTGCAGCCACAGGACG +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGHSSRS*RCSHRT
Trigger: CGTCCTGTGGCTGCAGCGGCAGCTGCGGCTCGAGTG...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGGTCACACGCCGCCCATaGACGTTCAAGACGACTGGC +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKVTRRP*TFKTTG
Trigger: GCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGAC...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGGGCTGGAGGAGGAGCTaGAGTACTCCGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKGWRRS*STPRNC
Trigger: GCAGTTCCTCGGAGTACTCCAGCTCCTCCTCCAGCC...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCGTGGAGGACTGTGCTaGGCGTCCCCGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVARGGLC*ASPWRP
Trigger: CGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCAGGAATGTTTCCTGTaGAGCCGCCACCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKQECFL*SRHRHC
Trigger: GCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATGGTGGTGGTGGTGGTaGTTCGGATTCGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAWWWWW*FGFEAG
Trigger: TCCTGCCTCGAATCCGAACCACCACCACCACCACCA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGACTCAGGACAGGGTCTaGGGTCCCGCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKTQDRV*GPAAAV
Trigger: TACAGCAGCAGCGGGACCCCAGACCCTGTCCTGAGT...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCGGGTGGAACTCCACTTaGAGAACTCCAAGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPGWNST*RTPSSV
Trigger: AACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCC...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACAGCTCTCGGGTGTGTaGCCTCTTCCAGAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAQLSGV*PLPESY
Trigger: GTAGGACTCTGGAAGAGGCCACACACCCGAGAGCTG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCTTCGGACGGCCTCCCTaGAGATGTCACACGCCGCCC +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVFGRPP*RCHTPP
Trigger: GGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGAA...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCGACCTTGGTGGCTTTTaGAGAGATGCATCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPDLGGF*RDASEL
Trigger: GAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTC...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCCTGCATGCTGGAAATaGCAGCCACCCCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELAPACWK*QPPPLR
Trigger: CCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAAAGTCACCTGCATGCTaGAAATGGCAGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAKSPAC*KWQPPP
Trigger: CGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTT...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCAGGTACCTCAGGCCTaGGTCCAGATCCACGTGGTT +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWQVPQA*VQIHVV
Trigger: AACCACGTGGATCTGGACTCAGGCCTGAGGTACCTG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGTTCTGCTCCTGGGTCTaGGGGGTCTGCAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKFCSWV*GVCRLE
Trigger: TTCCAGTCTGCAGACCCCTCAGACCCAGGAGCAGAA...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGAACTGGAAGTGAAGTaGTTCAGCAGCATCACCGGC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLELEVK*FSSITG
Trigger: GCCGGTGATGCTGCTGAATCACTTCACTTCCAGTTC...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGCATGCGGATGGGTGTaGTGTGTGAGGCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFACGWV*CVRLRS
Trigger: TGAGCGCAGCCTCACACATCACACCCATCCGCATGC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCAGTAGTTGGCGTAGCTaGCAGTCAGGCCACTCGAGC +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCSSWRS*QSGHSS
Trigger: GCTCGAGTGGCCTGACTGTCAGCTACGCCAACTACT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCAGTCCTGGGCGCGGTaGCCAGTGGCCCCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAQSWAR*PVAPQL
Trigger: CAACTGCGGGGCCACTGGTCACCGCGCCCAGGACTG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAAAGTACCTGGCCGGTTaGAGTCCATGGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAKYLAG*SPWTAV
Trigger: AACAGCCGTCCATGGACTTCAACCGGCCAGGTACTT...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACTGGGAACACAGCCGTaGCAGTGTCGGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSALGTQP*QCRNSS
Trigger: AGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGTGCTGGGCTCCGCTCTaGGAGGACGGGATACCAGCC +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMCWAPL*EDGIPA
Trigger: GGCTGGTATCCCGTCCTCGCAGAGCGGAGCCCAGCA...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTAGTACTCCGAGGAACTaGCTTCCCGGGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELASTPRN*LPGAAG
Trigger: ACCAGCTGCCCCGGGAAGGCAGTTCCTCGGAGTACT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTTGCAGCCACAGGACGTaGACACAATGCAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFCSHRT*TQCSLA
Trigger: CGCCAGGCTGCATTGTGTGCACGTCCTGTGGCTGCA...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCACCCCTGCTGTCCCTaGCATGAAGTTCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWHPCCP*HEVLHG
Trigger: CCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATCTCAAGTCCAAGTGTaGGGCTCCCTCCGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSASQVQV*GSLRKE
Trigger: CTCTTTCCGGAGGGAGCCGCACACTTGGACTTGAGA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCCCGCCCCACTACTGTaGCCCAAGACAGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELAPAPLL*PKTESV
Trigger: CACAGACTCTGTCTTGGGGCACAGTAGTGGGGCGGG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGAGGGAGCAAGGAGGGTaGAACCCAGTTCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMREQGG*NPVPIW
Trigger: CCAGATGGGAACTGGGTTGCACCCTCCTTGCTCCCT...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGGCTGGAGGAGGAGCTaGAGTACTCCGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFGWRRS*STPRNC
Trigger: GCAGTTCCTCGGAGTACTCCAGCTCCTCCTCCAGCC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCTGCAGGGGGCCCACTaGCATACTGCTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCLQGAH*HTAHCR
Trigger: TCTGCAATGAGCAGTATGCCAGTGGGCCCCCTGCAG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGGCAACGTGGCCATGTTaGCAAAGGACGTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWATWPC*QRTWRG
Trigger: ACCCCTCCACGTCCTTTGCCAACATGGCCACGTTGC...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGGCAACGTGGCCATGTTaGCAAAGGACGTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKATWPC*QRTWRG
Trigger: ACCCCTCCACGTCCTTTGCCAACATGGCCACGTTGC...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGGCAGCTGGGCAACGTaGCCATGTTGGCAAAGGACG +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFGSWAT*PCWQRT
Trigger: CGTCCTTTGCCAACATGGCCACGTTGCCCAGCTGCC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCAGGAGTCCGGCGGGTaGAACTCCACTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCQESGG*NSTWRT
Trigger: AGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGCACGTTCAAGACGACTaGCAGCTCCGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMHVQDD*QLRRGL
Trigger: AAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTG...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCAGACGCGCCGACCTTaGTGGCTTTTGGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKQTRRP*WLLERC
Trigger: GCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 72 bp CCAGGGGTGTCAGGAGTCCGGCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCA +
Preference number: 4 (lower is better)
Translates to: PGVSGVRRVELH*ENSKLGSRFRP
Trigger: TGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCGCCGGACTCCTGACACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCCTCAGTTCTTGGAGTaGTCTTGTGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFPQFLE*SCGRLG
Trigger: GCCCAGCCTGCCACAAGATCACTCCAAGAACTGAGG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCCCGCATGGGAGCAGTaGGGCAAGGGGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREPAWEQ*GKGAAE
Trigger: CTCCGCCGCCCCCTTGCCTCACTGCTCCCATGCGGG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCAGGCACCGTCTCTCTaGCTTCTCCTTTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWQAPSL*LLLFQL
Trigger: GAGCTGGAAAAGGAGAAGTCAGAGAGACGGTGCCTG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCAGGCACCGTCTCTCTaGCTTCTCCTTTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKQAPSL*LLLFQL
Trigger: GAGCTGGAAAAGGAGAAGTCAGAGAGACGGTGCCTG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCCACACCACTGCTGGTaGCCAGCGGCGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFPHHCW*PAAGPR
Trigger: CCTCGGCCCCGCCGCTGGTCACCAGCAGTGGTGTGG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGATCCCGGGGCAGCTGGTaGTGGGGCTGCTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGSRGSW*WGCSTS
Trigger: GGAAGTGGAGCAGCCCCATCACCAGCTGCCCCGGGA...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGTGGCGGAACTGGAAGTaGAGTGATTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLWRNWK*SDSAAS
Trigger: TGATGCTGCTGAATCACTTCACTTCCAGTTCCGCCA...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGATGGGTGTGATGTGTaGGGCTGCGCTCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFDGCDV*GCAQHL
Trigger: CAGATGCTGAGCGCAGCCTCACACATCACACCCATC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGCATGCGGATGGGTGTaGTGTGTGAGGCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVACGWV*CVRLRS
Trigger: TGAGCGCAGCCTCACACATCACACCCATCCGCATGC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTAGTAGTTGGCGTAGCTaGCAGTCAGGCCACTCGAGC +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFSSWRS*QSGHSS
Trigger: GCTCGAGTGGCCTGACTGTCAGCTACGCCAACTACT...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCTGCTGTCCCTGCCATaGAGTTCTGCATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELALLSLP*SSAWVA
Trigger: TGCCACCCATGCAGAACTTCATGGCAGGGACAGCAG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCTGGGAACACAGCCGTaGCAGTGTCGGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWLGTQP*QCRNSS
Trigger: AGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGCTCCTACTTACAGCTaGCGATTCTCGACTTCGGAC +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAAPTYS*RFSTSD
Trigger: GTCCGAAGTCGAGAATCGTCAGCTGTAAGTAGGAGC...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCAGTACTCCGAGGAACTaGCTTCCCGGGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVSTPRN*LPGAAG
Trigger: ACCAGCTGCCCCGGGAAGGCAGTTCCTCGGAGTACT...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCCTCTTTCCGGCTTGTaGACGGAATTCAGCATGCGG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCPLSGL*TEFSMR
Trigger: CCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCACGACCAGGGCCGGTTaGTGTGCTGTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVTTRAG*CAVFST
Trigger: GGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGT...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGCCTGCCATGAAGTTCTaGATGGGTGGCACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMPAMKF*MGGTAN
Trigger: GTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGG...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATGGAACCATTGCTACTaGCCACCAGTCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAWNHCY*PPVLGS
Trigger: AGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCCA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGAGACATGGCGTCTCTaGACTGCAACCAAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLETWRL*TATKSG
Trigger: TCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTC...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCAACCAAAACCAGACTTaGACAGATCTCGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPNQNQT*TDLAAL
Trigger: GAGAGCTGCGAGATCTGTGCAAGTCTGGTTTTGGTT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGTCTCAAGTCCAAGTGTaGGGCTCCCTCCGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMSQVQV*GSLRKE
Trigger: CTCTTTCCGGAGGGAGCCGCACACTTGGACTTGAGA...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGTGGCTTTTGGAGAGATaGATCCGAGCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMWLLER*IRARCW
Trigger: CCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCA...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGGCAGCGACTCCTCCGTaGAATGTGCTGATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMAATPP*NVLMCA
Trigger: TGCACACATCAGCACATTCCACGGAGGAGTCGCTGC...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGACTCTGAAGCTGCTGTaGGGGAGAGGAAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMTLKLL*GRGSAE
Trigger: CTCAGCACTTCCTCTCCCCCACAGCAGCTTCAGAGT...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGCCGGGTGCTGCCCGTaGTGCTGGGCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREAGCCP*CWAPLC
Trigger: GCAGAGCGGAGCCCAGCACCACGGGCAGCACCCGGC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGGCAGCACGTCCATCATaGCGCTGCCAAAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMAARPS*RCQSSC
Trigger: ACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTGC...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCCGTGGCGGCCGTGCTaGTCTCCACGACCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFPWRPC*SPRPGP
Trigger: CGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCAGCTCTCGGGTGTGTaGCCTCTTCCAGAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELAQLSGV*PLPESY
Trigger: GTAGGACTCTGGAAGAGGCCACACACCCGAGAGCTG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGGGCCTCACGGATGGGTaGTTCCATTTTCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWGLTDG*FHFLCA
Trigger: AGCGCAGAGAAAATGGAACCACCCATCCGTGAGGCC...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCAAAGGGCAAAGACGTaGCACATGGCCAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCQRAKT*HMASAT
Trigger: TGTGGCACTGGCCATGTGCCACGTCTTTGCCCTTTG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGCACAGGACTCTCCTCTaGGACAGCAGTCGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMHRTLL*DSSRVK
Trigger: CTTGACTCGACTGCTGTCCCAGAGGAGAGTCCTGTG...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCTTCTGCTCCTGGGTCTaGGGGGTCTGCAGACTGGAA +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVFCSWV*GVCRLE
Trigger: TTCCAGTCTGCAGACCCCTCAGACCCAGGAGCAGAA...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGCAAGAAGGGGAAGGTaGACACGGACGGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGARRGR*TRTDRR
Trigger: TCTCCGGTCCGTCCGTGTTCACCTTCCCCTTCTTGC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCAGTCCTGGGCGCGGTaGCCAGTGGCCCCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFQSWAR*PVAPQL
Trigger: CAACTGCGGGGCCACTGGTCACCGCGCCCAGGACTG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMTCKLC*GRAASS
Trigger: TGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGT...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCATCTACCTCAACGCTaGATGGCAGGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCHLPQR*MAGSKL
Trigger: CAACTTGGAGCCTGCCATTCAGCGTTGAGGTAGATG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCTGGGAACACAGCCGTaGCAGTGTCGGAACTCATCT +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELALGTQP*QCRNSS
Trigger: AGATGAGTTCCGACACTGTCACGGCTGTGTTCCCAG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCTTCTGTGTTTTCAGATaGGGAAGTCTGATGACCGCA +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPFCVFR*GSLMTA
Trigger: TGCGGTCATCAGACTTCCTCATCTGAAAACACAGAA...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGCTCTGCTGCATGGCTaGCCCGCCCCGACTGCACGG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREALLHG*PAPTAR
Trigger: CCGTGCAGTCGGGGCGGGGCAGCCATGCAGCAGAGC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTTGGGTGACATGGAGCTaGTCTCCGAAAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELAWVTWS*SPKAQR
Trigger: TCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCA...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCGCCACCGCCACTGCTaGTATAGAAACTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCRHRHC*YRNCFQ
Trigger: CTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCGCCACCGCCACTGCTaGTATAGAAACTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKRHRHC*YRNCFQ
Trigger: CTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTAGCCGCAGCTGCCGCTaGAGCCACAGGACGTGCACA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVASRSCR*SHRTCT
Trigger: TGTGCACGTCCTGTGGCTGCAGCGGCAGCTGCGGCT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGATGGCGTCTCTGCACTaGAACCAAAAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMMASLH*NQKWRW
Trigger: CCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCAT...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGATCTTGTGGCAGGCTaGGCAAGTGGGCAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGDLVAG*ASGQRA
Trigger: GGCGCGCTGCCCACTTGCCCAGCCTGCCACAAGATC...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGATCTTGTGGCAGGCTaGGCAAGTGGGCAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVADLVAG*ASGQRA
Trigger: GGCGCGCTGCCCACTTGCCCAGCCTGCCACAAGATC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCGCCCGACGTGGCTGGTaGGGGGCACTCGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFARRGW*GALEPH
Trigger: GTGTGGCTCGAGTGCCCCCCACCAGCCACGTCGGGC...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCGCAGCTCTGCTGCATaGCTGCCCCGCCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNARERSSAA*LPRPDC
Trigger: GCAGTCGGGGCGGGGCAGCCATGCAGCAGAGCTGCG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGGTGGCCTGATGGATTaGAGCTGGCCTCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFGGLMD*SWPHSA
Trigger: TGCAGAATGAGGCCAGCTCCAATCCATCAGGCCACC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGGGGGCAGGGGGTGGTaGCCTGATGGATTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAGGRGW*PDGLEL
Trigger: CAGCTCCAATCCATCAGGCCACCACCCCCTGCCCCC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCACCTGCACAGGCTGGTaGGGTGCGGACGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFTCTGW*GADAGS
Trigger: GCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGCACCCTGTCCAGCGTaGATGCATGCACGACTTTGG +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVAPCPA*MHARLW
Trigger: CCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGGGCAGCTGGGCAACGTaGCCATGTTGGCAAAGGACG +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMGSWAT*PCWQRT
Trigger: CGTCCTTTGCCAACATGGCCACGTTGCCCAGCTGCC...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGCTGGAGCTGGGGGCTaGGCAGCTGGGCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREAGAGG*AAGQRG
Trigger: GCCACGTTGCCCAGCTGCCCAGCCCCCAGCTCCAGC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGCTGGAGCTGGGGGCTaGGCAGCTGGGCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKAGAGG*AAGQRG
Trigger: GCCACGTTGCCCAGCTGCCCAGCCCCCAGCTCCAGC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCAGGAATGTTTCCTGTaGAGCCGCCACCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMQECFL*SRHRHC
Trigger: GCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTG...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCCTGCCCACCAGTCCTTaGGTCTGGTACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGLPTSP*VWYTPA
Trigger: AGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAG...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCTCAAAGCCACTGACTaGCTGGGAAGAAAGATACTC +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLLKATD*LGRKIL
Trigger: GAGTATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGGATAAGCCTCGGGGTTaGAGGTTCTTGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMDKPRG*RFLGSP
Trigger: CGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATC...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGATCCGAGCTCGCTGCTaGCAAACTCTCAAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKIRARC*QTLKSK
Trigger: CTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGAT...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCATCCGAGCTCGCTGCTaGCAAACTCTCAAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCIRARC*QTLKSK
Trigger: CTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGAT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 72 bp CTGATGACCGCAAAACGCTCTTCAGACGCGCCGACCTaGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LMTAKRSSDAPT*VAFGEMHPSSL
Trigger: CAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACCCGCATGGGAGCAGTaGGGCAAGGGGGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAPAWEQ*GKGAAE
Trigger: CTCCGCCGCCCCCTTGCCTCACTGCTCCCATGCGGG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGTTCTGTGTTTTCAGATaGGGAAGTCTGATGACCGCA +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLFCVFR*GSLMTA
Trigger: TGCGGTCATCAGACTTCCTCATCTGAAAACACAGAA...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGTTGCCACAGCATTCTaGAACAGACCACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAVATAF*NRPHFQ
Trigger: CTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAAC...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATCTGTTCCAGCTGGGTaGTGTTTAGGCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSASVPAG*CLGKVT
Trigger: AGTGACTTTGCCTAAACATCACCCAGCTGGAACAGA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCTTTCCTCACAACCTTaGAGACCATCAGTCATCATG +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLLSSQP*RPSVIM
Trigger: CATGATGACTGATGGTCTTCAAGGTTGTGAGGAAAG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTTTGTTACAACGCACGTaGGGCCGCGGCGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVALLQRT*GRGGWP
Trigger: TGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAA...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGGGGTGCTGCCCGTGGTaGTGGGCTCCGCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLGCCPW*WAPLCE
Trigger: CTCGCAGAGCGGAGCCCAGCACCACGGGCAGCACCC...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGTCCCCGTGGCGGCCGTaGTGGTCTCCACGACCAGGG +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGSPWRP*WSPRPG
Trigger: CCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGA...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGCGGCGTGGAGGACTGTaGTGGGCGTCCCCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWRRGGL*WASPWR
Trigger: CCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCG...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGCACAGAAGCCACCCTaGAGGGGGCCCACTGGCATA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAAQKPP*RGPTGI
Trigger: TATGCCAGTGGGCCCCCTGCAGGGTGGCTTCTGTGC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATGCTGCTATAGAAACTaGTTTCAGGGACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSACCYRN*FQGRRT
Trigger: TGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTAGCCGCCACCGCCACTaGTGCTATAGAAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFSRHRH*CYRNCF
Trigger: AAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCT...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGACGGCAAACGTGGACTaGCCACTCAGGACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMTANVD*PLRTGS
Trigger: AGACCCTGTCCTGAGTGGGCAGTCCACGTTTGCCGT...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGTGTGACTGGAACCATTaGTACTGCCCACCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWCDWNH*YCPPVL
Trigger: AAGGACTGGTGGGCAGTAGCAATGGTTCCAGTCACA...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGGGAGTCCAGACTTTCTaGTGGAGGGGCGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWGVQTF*WRGVFQ
Trigger: TTGAAATACGCCCCTCCAGCAGAAAGTCTGGACTCC...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCATTATTGGAGTCTCTTaGACTGACTGTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPIIGVS*TDCSQR
Trigger: CCTCTGAGAACAGTCAGTGCAAGAGACTCCAATAAT...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCCACACCTACCTGGTTaGCACAGCATTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCPHLPG*HSILKQ
Trigger: CTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTGCTGCCCGTGGTGCTaGGCTCCGCTCTGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFCCPWC*APLCED
Trigger: GTCCTCGCAGAGCGGAGCCCAGCACCACGGGCAGCA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCGGGCCTGTACCCCCATaGGGCTGGAGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFGPVPP*GWRRSW
Trigger: CCAGCTCCTCCTCCAGCCCCATGGGGGTACAGGCCC...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCTGATGGATTGGAGCTaGCCTCATTCTGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELALMDWS*PHSAQG
Trigger: TCCCTGTGCAGAATGAGGCCAGCTCCAATCCATCAG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTATGCATGCACGACTTTaGTCCGGGGACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFMHARL*SGDQRR
Trigger: TCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCAT...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTATGCATGCACGACTTTaGTCCGGGGACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELAMHARL*SGDQRR
Trigger: TCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCAT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTCGTGGAGGACTGTGCTaGGCGTCCCCGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASRGGLC*ASPWRP
Trigger: CGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACG...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGGAGGACTGTGCTaGGCGTCCCCGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNARGGLC*ASPWRP
Trigger: CGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTGGCGGACGGGCGGCGTaGAGGACTGTGCTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASGGRAA*RTVLGV
Trigger: GACGCCCAGCACAGTCCTCCACGCCGCCCGTCCGCC...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGCAGAAAAGGCAACTTTaGTGTTGGCTGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLQKRQL*CWLCTE
Trigger: CTCTGTACACAGCCAACACCAAAGTTGCCTTTTCTG...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGTGGTGGTGGTGGTGGTaGTTCGGATTCGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMWWWWW*FGFEAG
Trigger: TCCTGCCTCGAATCCGAACCACCACCACCACCACCA...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGCACGACGGGGAAGGTaGAGCCGCCGCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREARRGR*SRRRTA
Trigger: AGCAGTACGGCGGCGGCTCCACCTTCCCCGTCGTGC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGAAGTTCTGCATGGGTaGCACGGCAAACGTGGACTG +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVEVLHG*HGKRGL
Trigger: CAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGACCAGTCCTTGGGTCTaGTACACCCCTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMTSPWV*YTPAVP
Trigger: AGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGT...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMALRET*RLCTAT
Trigger: GGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGC...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGAGTGCCACACCTACCTaGTTGCCACAGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWSATPT*LPQHSE
Trigger: TTCAGAATGCTGTGGCAACCAGGTAGGTGTGGCACT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCCACAGGACTCTCCTCTaGGACAGCAGTCGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVHRTLL*DSSRVK
Trigger: CTTGACTCGACTGCTGTCCCAGAGGAGAGTCCTGTG...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 72 bp CAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTaGGAGAGATGCATCCGAGCTCGCTGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: QNALQTRRPWWL*ERCIRARCWQT
Trigger: AGTTTGCCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGCAAGAAGGGGAAGGTaGACACGGACGGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGARRGR*TRTDRR
Trigger: TCTCCGGTCCGTCCGTGTTCACCTTCCCCTTCTTGC...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCGTACTGCTGGGCGCTaGCGTAGCCGCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFRTAGR*RSRCCT
Trigger: TGTGCAGCAGCGGCTACGTCAGCGCCCAGCAGTACG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGGACTGTATCATTGTTaGAATGTCTGTCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RTASLEMSHAAHARSRRLGLYHC*NVCLRC
Trigger: ACACCTGAGACAGACATTTCAACAATGATACAGTCC...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGTGCTGGGCTCCGCTCTaGGAGGACGGGATACCAGCC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNARECWAPL*EDGIPA
Trigger: GGCTGGTATCCCGTCCTCGCAGAGCGGAGCCCAGCA...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAGGGCTGAGCCCGCGCTaGCCGCATGGGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAGLSPR*PHGSSE
Trigger: CTCACTGCTCCCATGCGGGCAGCGCGGGCTCAGCCC...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCCGTCCATCATGGCGCTaGCAAAGCTCTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVRPSWR*QSSCPL
Trigger: AAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACG...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGTCCCCGTGGCGGCCGTaGTGGTCTCCACGACCAGGG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWSPWRP*WSPRPG
Trigger: CCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGA...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGCCGGGGGTTTATTATTaGAGGGGGCACACTTATTTG +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWPGVYY*RGHTYL
Trigger: CAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGG...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGGCCCACTGGCATACTaGTCATTGCAGAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFGPLAY*SLQKRQ
Trigger: TTGCCTTTTCTGCAATGAGCAGTATGCCAGTGGGCC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGTGCTGCTATAGAAACTaGTTTCAGGGACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKCCYRN*FQGRRT
Trigger: TGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCA...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCTGGGGTCCCGCTGCTaGTGTAAGGGGCGTGCACGA +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFLGSRC*CKGRAR
Trigger: TCGTGCACGCCCCTTACAGCAGCAGCGGGACCCCAG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCTGCATCCGAGCTCGCTaGTGGCAAACTCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGCIRAR*WQTLKS
Trigger: GGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCA...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAACTTGCCGGCCTTGCTaGTCCCGCGCGGCGGACGGA +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNATCRPC*SRAADG
Trigger: TCCGTCCGCCGCGCGGGAGCAGCAAGGCCGGCAAGT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGCCGGGTGCTGCCCGTaGTGCTGGGCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLAGCCP*CWAPLC
Trigger: GCAGAGCGGAGCCCAGCACCACGGGCAGCACCCGGC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGGGGGCAGGGGGTGGTaGCCTGATGGATTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKGGRGW*PDGLEL
Trigger: CAGCTCCAATCCATCAGGCCACCACCCCCTGCCCCC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGGGGGCAGGGGGTGGTaGCCTGATGGATTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREGGRGW*PDGLEL
Trigger: CAGCTCCAATCCATCAGGCCACCACCCCCTGCCCCC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCTTTCATGCTGCTTCTTaGTCCAGATCCTTTATTCCT +
Preference number: 4 (lower is better)
Translates to: VMRACYNAREAAADGHCPFHAAS*SRSFIP
Trigger: AGGAATAAAGGATCTGGACCAAGAAGCAGCATGAAA...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCATGCTGGGCGTCCCCGTaGCGGCCGTGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNACWASP*RPCWSP
Trigger: TGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCA...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACAGGAATGTTTCCTGTaGAGCCGCCACCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGQECFL*SRHRHC
Trigger: GCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGGCACGACGGGGAAGGTaGAGCCGCCGCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGARRGR*SRRRTA
Trigger: AGCAGTACGGCGGCGGCTCCACCTTCCCCGTCGTGC...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGTGGCACGGCAAACGTaGACTGCCCACTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAVARQT*TAHSGQ
Trigger: CTGTCCTGAGTGGGCAGTCCACGTTTGCCGTGCCAC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGATAAGCCTCGGGGTTaGAGGTTCTTGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVADKPRG*RFLGSP
Trigger: CGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATTCGGACGGCCTCCCTaGAGATGTCACACGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKFGRPP*RCHTPP
Trigger: GGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGAA...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCACGCGCCGACCTTGGTaGCTTTTGGAGAGATGCATC +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGTRRPW*LLERCI
Trigger: GATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGT...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGAGCCTCTGTTCCAGCTaGGTGATGTTTAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWSLCSS*VMFRQS
Trigger: ACTTTGCCTAAACATCACCCAGCTGGAACAGAGGCT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
3UTR CAA 72 bp GGTTCTCGATTCAGACCACGTGTAGCTGCCCTGGAATaGACGTGTGAGCCTAGGAGGGCCAGTGATGGCAAT +
Preference number: 4 (lower is better)
Translates to: GSRFRPRVAALE*TCEPRRASDGN
Trigger: ATTGCCATCACTGGCCCTCCTAGGCTCACACGTCAATTCCAGGGCAGCTACACGTGGTCTGAATCGAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 72 bp GAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTaGGGGAGCCCGTGGGAGATAAAGCAACTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ESASDKPRGWRF*GSPWEIKQLAN
Trigger: GTTTGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACAGCTAAGCAAGGAATaGGTTTCTCCAAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAQLSKE*VSPSSL
Trigger: AAGAGAACTTGGAGAAACTCATTCCTTGCTTAGCTG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACAGGTACCTCAGGCCTaGGTCCAGATCCACGTGGTT +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGQVPQA*VQIHVV
Trigger: AACCACGTGGATCTGGACTCAGGCCTGAGGTACCTG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCTCATTTTTCAACACGTaGGAAGGTAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCSFFNT*EGNEAR
Trigger: CCTGGCCTCATTACCTTCTCACGTGTTGAAAAATGA...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGGAACTGGAAGTGAAGTaGTTCAGCAGCATCACCGGC +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMELEVK*FSSITG
Trigger: GCCGGTGATGCTGCTGAATCACTTCACTTCCAGTTC...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGATGCTGCACATGGGACTaGAGGGCAAGAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGCCTWD*RARRGR
Trigger: CCTTCCCCTTCTTGCCCTTCAGTCCCATGTGCAGCA...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGAGCCTCTGCTGGTGCTaGCTCTTTCAATATGGATTA +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKSLCWC*LFQYGL
Trigger: TAATCCATATTGAAAGAGTCAGCACCAGCAGAGGCT...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGAACTGCTCTTCAAATTaGACGCTCACATCACAAGGC +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKNCSSN*TLTSQG
Trigger: GCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTT...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCTTTCCTCACAACCTTaGAGACCATCAGTCATCATG +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKLSSQP*RPSVIM
Trigger: CATGATGACTGATGGTCTTCAAGGTTGTGAGGAAAG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAGGGTGCTGCCCGTGGTaGTGGGCTCCGCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASGCCPW*WAPLCE
Trigger: CTCGCAGAGCGGAGCCCAGCACCACGGGCAGCACCC...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGGGCTGAGCCCGCGCTaGCCGCATGGGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLGLSPR*PHGSSE
Trigger: CTCACTGCTCCCATGCGGGCAGCGCGGGCTCAGCCC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGAGCCCAGAGAGGACCTaGACAGGCTGGTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLSPERT*TGWWGA
Trigger: CGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCT...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTTCCAGCGTGGATGCATaGACGACTTTGGTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVASSVDA*TTLVRG
Trigger: TCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGA...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCCTGTCCAGCGTGGATaGATGCACGACTTTGGTCCG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAPVQRG*MHDFGP
Trigger: CGGACCAAAGTCGTGCATGCATCCACGCTGGACAGG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGTCCCCGTGGCGGCCGTaGTGGTCTCCACGACCAGGG +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLSPWRP*WSPRPG
Trigger: CCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGA...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGTGGGAGAGGCAGTGTTaGTGTTTGCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMWERQC*CLHRSH
Trigger: GTGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCA...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCACGTGGAGGGGTGGCTaGTGGGAGAGGCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFTWRGG*WERQCC
Trigger: GCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGGGTCTGGGGTCCCGCTaGTGCTGTAAGGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLGLGSR*CCKGRA
Trigger: TGCACGCCCCTTACAGCAGCAGCGGGACCCCAGACC...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTACGGCAAACGTGGACTaGCCACTCAGGACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVATANVD*PLRTGS
Trigger: AGACCCTGTCCTGAGTGGGCAGTCCACGTTTGCCGT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGGAGTCCAGACTTTCTaGTGGAGGGGCGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVGVQTF*WRGVFQ
Trigger: TTGAAATACGCCCCTCCAGCAGAAAGTCTGGACTCC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAACGCAGAGGCCTTCGCTaGTGGGAACACAGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKRRGLR*WEHSRD
Trigger: GTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCG...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCGCAGAGGCCTTCGCTaGTGGGAACACAGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNARERRGLR*WEHSRD
Trigger: GTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGGAGAACCTGGGCCGTaGGTCTGGCGGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKGEPGP*VWRNWK
Trigger: CTTCCAGTTCCGCCAGACCCACGGCCCAGGTTCTCC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGACCTGCACAGGCTGGTaGGGTGCGGACGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLTCTGW*GADAGS
Trigger: GCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGT...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGAGGACCTGCACAGGCTaGTGGGGTGCGGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLRTCTG*WGADAG
Trigger: GCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCT...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCATGCATGCACGACTTTaGTCCGGGGACCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGMHARL*SGDQRR
Trigger: TCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCAT...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGTGGGGGCTGGGCAGCTaGGCAACGTGGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMWGLGS*ATWPCW
Trigger: CCAACATGGCCACGTTGCCCAGCTGCCCAGCCCCCA...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTACCAGTCCTTGGGTCTaGTACACCCCTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVATSPWV*YTPAVP
Trigger: AGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCAACCTAAAAGTACCTaGCCGGTTGAAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFQPKST*PVEVHG
Trigger: TCCATGGACTTCAACCGGCCAGGTACTTTTAGGTTG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCTCAAAGCCACTGACTaGCTGGGAAGAAAGATACTC +
Preference number: 4 (lower is better)
Translates to: LFRRADLGGFWRDASELALKATD*LGRKIL
Trigger: GAGTATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAAGAGGCCTTCGCTGCTaGGAACACAGCCGTGACAGT +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGRGLRC*EHSRDS
Trigger: ACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCT...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCCTGCATGCTGGAAATaGCAGCCACCCCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREPACWK*QPPPLR
Trigger: CCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCCAGCTAAGCAAGGAATaGGTTTCTCCAAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCQLSKE*VSPSSL
Trigger: AAGAGAACTTGGAGAAACTCATTCCTTGCTTAGCTG...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAACGACAGCAGCAGTTTaGTGGGCGGACGGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNATTAAV*WADGRR
Trigger: ACGCCGCCCGTCCGCCCATCAAACTGCTGCTGTCGT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAAAGTACCTGGCCGGTTaGAGTCCATGGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGKYLAG*SPWTAV
Trigger: AACAGCCGTCCATGGACTTCAACCGGCCAGGTACTT...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGAGCCCAGAGAGGACCTaGACAGGCTGGTGGGGTGCG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWSPERT*TGWWGA
Trigger: CGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCT...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCAGGGCCGGTTGCTGTaGTGTCTTCAGCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREQGRLL*CLQHPV
Trigger: GACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGACGACCAGGGCCGGTTaGTGTGCTGTCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNARETTRAG*CAVFST
Trigger: GGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGT...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGTTAGGACAGGAAGTTTaGCCAGAAATGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKLGQEV*PEMAES
Trigger: TGATTCTGCCATTTCTGGGCAAACTTCCTGTCCTAA...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCTTAGGACAGGAAGTTTaGCCAGAAATGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCLGQEV*PEMAES
Trigger: TGATTCTGCCATTTCTGGGCAAACTTCCTGTCCTAA...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGGGGGGCACACTTATTTaGACATTATTAGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMGGTLI*TLLGQE
Trigger: TTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCC...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCTGGCATACTGCTCATTaGAGAAAAGGCAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQTRRPWWLLERCIRARCWHTAH*RKGNFG
Trigger: ACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCA...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTGGTCTGGGGTCCCGCTaGTGCTGTAAGGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASGLGSR*CCKGRA
Trigger: TGCACGCCCCTTACAGCAGCAGCGGGACCCCAGACC...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGTGTGACTGGAACCATTaGTACTGCCCACCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMCDWNH*YCPPVL
Trigger: AAGGACTGGTGGGCAGTAGCAATGGTTCCAGTCACA...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGGAGTCCAGACTTTCTaGTGGAGGGGCGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGGVQTF*WRGVFQ
Trigger: TTGAAATACGCCCCTCCAGCAGAAAGTCTGGACTCC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGATTATTGGAGTCTCTTaGACTGACTGTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWIIGVS*TDCSQR
Trigger: CCTCTGAGAACAGTCAGTGCAAGAGACTCCAATAAT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGCGCAGAGGCCTTCGCTaGTGGGAACACAGCCGTGAC +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGRRGLR*WEHSRD
Trigger: GTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCTGCG...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGTCACACGCCGCCCATaGACGTTCAAGACGACTGGC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREVTRRP*TFKTTG
Trigger: GCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGAC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTTGCATCCGAGCTCGCTaGTGGCAAACTCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVACIRAR*WQTLKS
Trigger: GGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCA...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTTGGCTTTTGGAGAGATaGATCCGAGCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAWLLER*IRARCW
Trigger: CCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCA...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAACCCGCCCCACTACTGTaGCCCAAGACAGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKPAPLL*PKTESV
Trigger: CACAGACTCTGTCTTGGGGCACAGTAGTGGGGCGGG...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTTCCTAAGGGCCTCTTaGGCAGCGACTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFFLRAS*AATPPW
Trigger: CCACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGGGATTGCCAGGACTTaGACTCTGAAGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAGIART*TLKLLW
Trigger: CCACAGCAGCTTCAGAGTCCAAGTCCTGGCAATCCC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGTGCTGCCCGTGGTGCTaGGCTCCGCTCTGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLCCPWC*APLCED
Trigger: GTCCTCGCAGAGCGGAGCCCAGCACCACGGGCAGCA...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGGGAGAACCTGGGCCGTaGGTCTGGCGGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGGEPGP*VWRNWK
Trigger: CTTCCAGTTCCGCCAGACCCACGGCCCAGGTTCTCC...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGGTGGCCTGATGGATTaGAGCTGGCCTCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAGGLMD*SWPHSA
Trigger: TGCAGAATGAGGCCAGCTCCAATCCATCAGGCCACC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGTGGCACGGCAAACGTaGACTGCCCACTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKVARQT*TAHSGQ
Trigger: CTGTCCTGAGTGGGCAGTCCACGTTTGCCGTGCCAC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCCAACCTAAAAGTACCTaGCCGGTTGAAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVQPKST*PVEVHG
Trigger: TCCATGGACTTCAACCGGCCAGGTACTTTTAGGTTG...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGTTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMFLGSP*EIKQLA
Trigger: TGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAA...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGAAGAGGCCTCACGGATaGGTGGTTCCATTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMKRPHG*VVPFSL
Trigger: CAGAGAAAATGGAACCACCCATCCGTGAGGCCTCTT...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAACGCGCCGACCTTGGTaGCTTTTGGAGAGATGCATC +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGTRRPW*LLERCI
Trigger: GATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGT...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCCTCAGTTCTTGGAGTaGTCTTGTGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREPQFLE*SCGRLG
Trigger: GCCCAGCCTGCCACAAGATCACTCCAAGAACTGAGG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGCTCCAGCTGGGTCTTaGGCTTCTTCTTTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREAPAGS*ASSLPP
Trigger: TGGGGGCAAAGAAGAAGCTCAAGACCCAGCTGGAGC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGATGGGTGTGATGTGTaGGGCTGCGCTCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREDGCDV*GCAQHL
Trigger: CAGATGCTGAGCGCAGCCTCACACATCACACCCATC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGGCAAGAAGGGGAAGGTaGACACGGACGGACCGGAGA +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGARRGR*TRTDRR
Trigger: TCTCCGGTCCGTCCGTGTTCACCTTCCCCTTCTTGC...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCTTCCCGCTCTTTTTGTaGCTGGAACCATTGCTACTG +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGFPLFL*LEPLLL
Trigger: CAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAA...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCAGCCTCTGCTGGTGCTaGCTCTTTCAATATGGATTA +
Preference number: 4 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVSLCWC*LFQYGL
Trigger: TAATCCATATTGAAAGAGTCAGCACCAGCAGAGGCT...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVATCKLC*GRAASS
Trigger: TGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACATCTACCTCAACGCTaGATGGCAGGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGHLPQR*MAGSKL
Trigger: CAACTTGGAGCCTGCCATTCAGCGTTGAGGTAGATG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGCTTTCAGTGCCACCTaGCTCATTCTTTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGAFSAT*LILWKS
Trigger: TGACTTCCAAAGAATGAGTCAGGTGGCACTGAAAGC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTCCAGCGTGGATGCATaGACGACTTTGGTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFSSVDA*TTLVRG
Trigger: TCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCCGGGGGTTTATTATTaGAGGGGGCACACTTATTTG +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMPGVYY*RGHTYL
Trigger: CAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGG...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGACGTGGAGGGGTGGCTaGTGGGAGAGGCAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWTWRGG*WERQCC
Trigger: GCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGT...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGAGCCGCAGCTGCCGCTaGAGCCACAGGACGTGCACA +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLSRSCR*SHRTCT
Trigger: TGTGCACGTCCTGTGGCTGCAGCGGCAGCTGCGGCT...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCACCCCTGCTGTCCCTaGCATGAAGTTCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREHPCCP*HEVLHG
Trigger: CCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGATGGAACCATTGCTACTaGCCACCAGTCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGWNHCY*PPVLGS
Trigger: AGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCCA...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTTGGAACCATTGCTACTaGCCACCAGTCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAWNHCY*PPVLGS
Trigger: AGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCCA...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACCATGGACGGCTGTTTaGAGTCCTGGGCGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAPWTAV*SPGRGD
Trigger: GTCACCGCGCCCAGGACTGCAAACAGCCGTCCATGG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACTGCAAAATCCCAACTaGAAGATTTTACCAATCAGT +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSALQNPN*KILPIS
Trigger: ACTGATTGGTAAAATCTTGCAGTTGGGATTTTGCAG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGTTCCTAAGGGCCTCTTaGGCAGCGACTCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGFLRAS*AATPPW
Trigger: CCACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAA...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGTGCACAGGGAGAACCTaGGCCGTGGGTCTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWCTGRT*AVGLAE
Trigger: TTCCGCCAGACCCACGGCCCAGGTTCTCCCTGTGCA...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCTGATGGATTGGAGCTaGCCTCATTCTGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVALMDWS*PHSAQG
Trigger: TCCCTGTGCAGAATGAGGCCAGCTCCAATCCATCAG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGCACCCTGTCCAGCGTaGATGCATGCACGACTTTGG +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKAPCPA*MHARLW
Trigger: CCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGGCGGACGGGCGGCGTaGAGGACTGTGCTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRGGRAA*RTVLGV
Trigger: GACGCCCAGCACAGTCCTCCACGCCGCCCGTCCGCC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCTGCAGGGGGCCCACTaGCATACTGCTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFLQGAH*HTAHCR
Trigger: TCTGCAATGAGCAGTATGCCAGTGGGCCCCCTGCAG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGGTGGCACGGCAAACGTaGACTGCCCACTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGVARQT*TAHSGQ
Trigger: CTGTCCTGAGTGGGCAGTCCACGTTTGCCGTGCCAC...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATTCCTTATGTCTCCATaGCTTAATAACGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAFLMSP*LNNVLL
Trigger: CAACAGAACGTTATTAAGCCATGGAGACATAAGGAA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCACTGCAACCAAAAGTaGAGGTGGCCGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAHCNQK*RWPISP
Trigger: TGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTATCCGAGCTCGCTGCTaGCAAACTCTCAAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAIRARC*QTLKSK
Trigger: CTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCGGAT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTCCTGCATGCTGGAAATaGCAGCCACCCCCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASPACWK*QPPPLR
Trigger: CCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGG...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCAAGTCACCTGCATGCTaGAAATGGCAGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFKSPAC*KWQPPP
Trigger: CGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGCCTCAGTTCTTGGAGTaGTCTTGTGGCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLPQFLE*SCGRLG
Trigger: GCCCAGCCTGCCACAAGATCACTCCAAGAACTGAGG...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCTCCGTGGAATGTGCTaGTGTGTGCAGGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNARELRGMC*CVQGIL
Trigger: GAGAATGCCCTGCACACATCAGCACATTCCACGGAG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGTCATTTTTCAACACGTaGGAAGGTAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMSFFNT*EGNEAR
Trigger: CCTGGCCTCATTACCTTCTCACGTGTTGAAAAATGA...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGCCAGGACTTGGACTCTaGAGCTGCTGTGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWPGLGL*SCCGGE
Trigger: CTCTCCCCCACAGCAGCTTCAGAGTCCAAGTCCTGG...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACCAGGACTTGGACTCTaGAGCTGCTGTGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAPGLGL*SCCGGE
Trigger: CTCTCCCCCACAGCAGCTTCAGAGTCCAAGTCCTGG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGGCATGCGGATGGGTGTaGTGTGTGAGGCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWACGWV*CVRLRS
Trigger: TGAGCGCAGCCTCACACATCACACCCATCCGCATGC...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGTGCTGCACATGGGACTaGAGGGCAAGAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGCCTWD*RARRGR
Trigger: CCTTCCCCTTCTTGCCCTTCAGTCCCATGTGCAGCA...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCAAGTACCTGGCCGGTTaGAGTCCATGGACGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFKYLAG*SPWTAV
Trigger: AACAGCCGTCCATGGACTTCAACCGGCCAGGTACTT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGAATGTGCTGATGTGTaGAGGGCATTCTCCAAACTA +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGECADV*RAFSKL
Trigger: TAGTTTGGAGAATGCCCTGCACACATCAGCACATTC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGCTCTGCTGCATGGCTaGCCCGCCCCGACTGCACGG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRALLHG*PAPTAR
Trigger: CCGTGCAGTCGGGGCGGGGCAGCCATGCAGCAGAGC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCATGCAGCCACAGGACGTaGACACAATGCAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNACSHRT*TQCSLA
Trigger: CGCCAGGCTGCATTGTGTGCACGTCCTGTGGCTGCA...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCCTGCCATGAAGTTCTaGATGGGTGGCACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFPAMKF*MGGTAN
Trigger: GTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCCATGGACGGCTGTTTaGAGTCCTGGGCGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLPWTAV*SPGRGD
Trigger: GTCACCGCGCCCAGGACTGCAAACAGCCGTCCATGG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTGGCTTTTGGAGAGATaGATCCGAGCTCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFWLLER*IRARCW
Trigger: CCAGCAGCGAGCTCGGATGCATCTCTCCAAAAGCCA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCCACACCTACCTGGTTaGCACAGCATTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAPHLPG*HSILKQ
Trigger: CTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGTTCCCATCTGGCAAGTaGCTAAAGCCCCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMFPSGK*LKPRSA
Trigger: GGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGGAA...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGCTTGGAGTGATCTTGTaGCAGGCTGGGCAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMLGVIL*QAGQVG
Trigger: GCCCACTTGCCCAGCCTGCCACAAGATCACTCCAAG...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGACTCTGAAGCTGCTGTaGGGGAGAGGAAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNARETLKLL*GRGSAE
Trigger: CTCAGCACTTCCTCTCCCCCACAGCAGCTTCAGAGT...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCATGCACAGGGAGAACCTaGGCCGTGGGTCTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASCTGRT*AVGLAE
Trigger: TTCCGCCAGACCCACGGCCCAGGTTCTCCCTGTGCA...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTCCGTGGCGGCCGTGCTaGTCTCCACGACCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFPWRPC*SPRPGP
Trigger: CGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGG...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGCTGCAGGGGGCCCACTaGCATACTGCTCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGLQGAH*HTAHCR
Trigger: TCTGCAATGAGCAGTATGCCAGTGGGCCCCCTGCAG...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGCTGGAGCTGGGGGCTaGGCAGCTGGGCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRAGAGG*AAGQRG
Trigger: GCCACGTTGCCCAGCTGCCCAGCCCCCAGCTCCAGC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGTGGTGGTGGTGGTGGTaGTTCGGATTCGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLWWWWW*FGFEAG
Trigger: TCCTGCCTCGAATCCGAACCACCACCACCACCACCA...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCGAAGTTCTGCATGGGTaGCACGGCAAACGTGGACTG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFEVLHG*HGKRGL
Trigger: CAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTC...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGTTCCTTATGTCTCCATaGCTTAATAACGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKFLMSP*LNNVLL
Trigger: CAACAGAACGTTATTAAGCCATGGAGACATAAGGAA...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGGATAAGCCTCGGGGTTaGAGGTTCTTGGGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWDKPRG*RFLGSP
Trigger: CGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATC...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGATCAAAATAGTTACGTaGGTAACAACAGACGCTTTC +
Preference number: 4 (lower is better)
Translates to: CESASDKPRGWRFLGSPWIKIVT*VTTDAF
Trigger: GAAAGCGTCTGTTGTTACCCACGTAACTATTTTGAT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGCACGTTCAAGACGACTaGCAGCTCCGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLHVQDD*QLRRGL
Trigger: AAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTG...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCTTCGGACGGCCTCCCTaGAGATGTCACACGCCGCCC +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTFGRPP*RCHTPP
Trigger: GGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCGAA...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCAACCCAGTTCCCATCTaGCAAGTGCCTAAAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFNPVPI*QVPKAP
Trigger: CGGGGCTTTAGGCACTTGCCAGATGGGAACTGGGTT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCACAGGACTCTCCTCTaGGACAGCAGTCGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFHRTLL*DSSRVK
Trigger: CTTGACTCGACTGCTGTCCCAGAGGAGAGTCCTGTG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGATCCCGGGGCAGCTGGTaGTGGGGCTGCTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRSRGSW*WGCSTS
Trigger: GGAAGTGGAGCAGCCCCATCACCAGCTGCCCCGGGA...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCACTTGCAAACTCTGCTaGGGACGTGCAGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFTCKLC*GRAASS
Trigger: TGAGGATGCTGCACGTCCTCAGCAGAGTTTGCAAGT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGGGCTGAGCCCGCGCTaGCCGCATGGGAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFGLSPR*PHGSSE
Trigger: CTCACTGCTCCCATGCGGGCAGCGCGGGCTCAGCCC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACTTGAGCTTCTTCTTTaGCCCCATGGTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGLELLL*PHGKRL
Trigger: GAGTCTCTTACCATGGGGGCAAAGAAGAAGCTCAAG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTCCTGTCCAGCGTGGATaGATGCACGACTTTGGTCCG +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASPVQRG*MHDFGP
Trigger: CGGACCAAAGTCGTGCATGCATCCACGCTGGACAGG...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGGGGGCACACTTATTTaGACATTATTAGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGGGTLI*TLLGQE
Trigger: TTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGTGGGAGAGGCAGTGTTaGTGTTTGCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREWERQC*CLHRSH
Trigger: GTGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCA...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAATGGCGTCTCTGCACTaGAACCAAAAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKMASLH*NQKWRW
Trigger: CCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCAT...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTAACCAAAACCAGACTTaGACAGATCTCGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVANQNQT*TDLAAL
Trigger: GAGAGCTGCGAGATCTGTGCAAGTCTGGTTTTGGTT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGTGCATCCGAGCTCGCTaGTGGCAAACTCTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLCIRAR*WQTLKS
Trigger: GGACTTGAGAGTTTGCCAGCAGCGAGCTCGGATGCA...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGGGGATTGCCAGGACTTaGACTCTGAAGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLGIART*TLKLLW
Trigger: CCACAGCAGCTTCAGAGTCCAAGTCCTGGCAATCCC...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACGCCCGACGTGGCTGGTaGGGGGCACTCGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNARRGW*GALEPH
Trigger: GTGTGGCTCGAGTGCCCCCCACCAGCCACGTCGGGC...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGGAGAACCTGGGCCGTaGGTCTGGCGGAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTGEPGP*VWRNWK
Trigger: CTTCCAGTTCCGCCAGACCCACGGCCCAGGTTCTCC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCCTGATGGATTGGAGCTaGCCTCATTCTGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFLMDWS*PHSAQG
Trigger: TCCCTGTGCAGAATGAGGCCAGCTCCAATCCATCAG...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAGCACCCTGTCCAGCGTaGATGCATGCACGACTTTGG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAAPCPA*MHARLW
Trigger: CCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGC...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAACTCAGGACAGGGTCTaGGGTCCCGCTGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASTQDRV*GPAAAV
Trigger: TACAGCAGCAGCGGGACCCCAGACCCTGTCCTGAGT...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGACCAGTCCTTGGGTCTaGTACACCCCTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWTSPWV*YTPAVP
Trigger: AGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGT...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCTGCCCACCAGTCCTTaGGTCTGGTACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLLPTSP*VWYTPA
Trigger: AGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGGGCGCGGTGACCAGTaGCCCCGCAGTTGTAACAAG +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTGRGDQ*PRSCNK
Trigger: CTTGTTACAACTGCGGGGCCACTGGTCACCGCGCCC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGAACCAAAAGTGGAGGTaGCCGATCTCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNARENQKWR*PISPAT
Trigger: TGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTT...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCACTGCAACCAAAAGTaGAGGTGGCCGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREHCNQK*RWPISP
Trigger: TGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGGCTCTTCGGGAGACATaGCGTCTCTGCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWALRET*RLCTAT
Trigger: GGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGC...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGGGTGGAACTCCACTTaGAGAACTCCAAGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREGWNST*RTPSSV
Trigger: AACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTATCAAAATAGTTACGTaGGTAACAACAGACGCTTTC +
Preference number: 4 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFIKIVT*VTTDAF
Trigger: GAAAGCGTCTGTTGTTACCCACGTAACTATTTTGAT...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAAAGTCACCTGCATGCTaGAAATGGCAGCCACCCCCG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAKSPAC*KWQPPP
Trigger: CGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCATAAAATAAAACACTaGTTGCCACAGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKHKIKH*LPQHSE
Trigger: TTCAGAATGCTGTGGCAACCAGTGTTTTATTTTATG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568020.6
CDS-3UTR TCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCAGGTACCTCAGGCCTaGGTCCAGATCCACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLQVPQA*VQIHVV
Trigger: AACCACGTGGATCTGGACTCAGGCCTGAGGTACCTG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTTCATTTTTCAACACGTaGGAAGGTAATGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVASFFNT*EGNEAR
Trigger: CCTGGCCTCATTACCTTCTCACGTGTTGAAAAATGA...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCCAGGACTTGGACTCTaGAGCTGCTGTGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTPGLGL*SCCGGE
Trigger: CTCTCCCCCACAGCAGCTTCAGAGTCCAAGTCCTGG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCATGAGGATGGCAGGTaGTGTGTCCATCTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLHEDGR*CVHLGP
Trigger: CGGACCCAGATGGACACATCACCTGCCATCCTCATG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAACGACAGCAGCAGTTTaGTGGGCGGACGGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRTTAAV*WADGRR
Trigger: ACGCCGCCCGTCCGCCCATCAAACTGCTGCTGTCGT...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAAGCCTCTGCTGGTGCTaGCTCTTTCAATATGGATTA +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGSLCWC*LFQYGL
Trigger: TAATCCATATTGAAAGAGTCAGCACCAGCAGAGGCT...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGAGGGCTCAAAGCCACTaGCTGGCTGGGAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMRAQSH*LAGKKD
Trigger: ATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAGCCCT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTTTCTGTGTTTTCAGATaGGGAAGTCTGATGACCGCA +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAFCVFR*GSLMTA
Trigger: TGCGGTCATCAGACTTCCTCATCTGAAAACACAGAA...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACTTTCCTCACAACCTTaGAGACCATCAGTCATCATG +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGLSSQP*RPSVIM
Trigger: CATGATGACTGATGGTCTTCAAGGTTGTGAGGAAAG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTTCCACCCGCAGCTCTaGTGCATGGCTGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFFHPQL*CMAAPP
Trigger: GGGCGGGGCAGCCATGCAGCAGAGCTGCGGGTGGAA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGCGTCCATCATGGCGCTaGCAAAGCTCTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGRPSWR*QSSCPL
Trigger: AAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACG...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGTGGGTGACATGGAGCTaGTCTCCGAAAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWWVTWS*SPKAQR
Trigger: TCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCA...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGGTCTGGGGTCCCGCTaGTGCTGTAAGGGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRGLGSR*CCKGRA
Trigger: TGCACGCCCCTTACAGCAGCAGCGGGACCCCAGACC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGCCTGCCATGAAGTTCTaGATGGGTGGCACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWPAMKF*MGGTAN
Trigger: GTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGG...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCACACCCCTGCTGTCCCTaGCATGAAGTTCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASHPCCP*HEVLHG
Trigger: CCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTG...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGGGTCTGGTACACCCCTaGTGTCCCTGCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWGLVHP*CPCHEV
Trigger: AACTTCATGGCAGGGACAGCAGGGGTGTACCAGACC...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAAGGGAGCAAGGAGGGTaGAACCCAGTTCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASREQGG*NPVPIW
Trigger: CCAGATGGGAACTGGGTTGCACCCTCCTTGCTCCCT...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTCTTTGGAAGTCACCTaGATGCTGGAAATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFSLEVT*MLEMAA
Trigger: GGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATCTTTGGAAGTCACCTaGATGCTGGAAATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKSLEVT*MLEMAA
Trigger: GGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGA...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCTTGGAGTGATCTTGTaGCAGGCTGGGCAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLLGVIL*QAGQVG
Trigger: GCCCACTTGCCCAGCCTGCCACAAGATCACTCCAAG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCTTTCATGCTGCTTCTTaGTCCAGATCCTTTATTCCT +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGFHAAS*SRSFIP
Trigger: AGGAATAAAGGATCTGGACCAAGAAGCAGCATGAAA...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGCAACGTGGCCATGTTaGCAAAGGACGTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLATWPC*QRTWRG
Trigger: ACCCCTCCACGTCCTTTGCCAACATGGCCACGTTGC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGTCCAGACTTTCTGCTaGAGGGGCGTATTTCAACCT +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREVQTFC*RGVFQP
Trigger: AGGTTGAAATACGCCCCTCCAGCAGAAAGTCTGGAC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGAACCAAAAGTGGAGGTaGCCGATCTCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMNQKWR*PISPAT
Trigger: TGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGGGGTGGAACTCCACTTaGAGAACTCCAAGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGGWNST*RTPSSV
Trigger: AACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCC...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGAGAGGCCTTCGCTGCTaGGAACACAGCCGTGACAGT +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLRGLRC*EHSRDS
Trigger: ACTGTCACGGCTGTGTTCCCAGCAGCGAAGGCCTCT...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTGGCCTCACGGATGGGTaGTTCCATTTTCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASGLTDG*FHFLCA
Trigger: AGCGCAGAGAAAATGGAACCACCCATCCGTGAGGCC...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCAGACGCGCCGACCTTaGTGGCTTTTGGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLQTRRP*WLLERC
Trigger: GCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 72 bp ATTGGAGTCTCTTGCACTGACTGTTCTCAGAGGAGTTaGGCTCCCAGAACCGCAGAGATTTACATCAGGGTA +
Preference number: 4 (lower is better)
Translates to: IGVSCTDCSQRS*APRTAEIYIRV
Trigger: TACCCTGATGTAAATCTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACAGTCAGTGCAAGAGACTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGGAACTGGAAGTGAAGTaGTTCAGCAGCATCACCGGC +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWELEVK*FSSITG
Trigger: GCCGGTGATGCTGCTGAATCACTTCACTTCCAGTTC...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGTGGCGGAACTGGAAGTaGAGTGATTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMWRNWK*SDSAAS
Trigger: TGATGCTGCTGAATCACTTCACTTCCAGTTCCGCCA...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTTCCCGCTCTTTTTGTaGCTGGAACCATTGCTACTG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFFPLFL*LEPLLL
Trigger: CAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGAGGGCTCAAAGCCACTaGCTGGCTGGGAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWRAQSH*LAGKKD
Trigger: ATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAGCCCT...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGGCTCCTACTTACAGCTaGCGATTCTCGACTTCGGAC +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWAPTYS*RFSTSD
Trigger: GTCCGAAGTCGAGAATCGTCAGCTGTAAGTAGGAGC...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGGTTGCCACAGCATTCTaGAACAGACCACACTTTCAG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREVATAF*NRPHFQ
Trigger: CTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAAC...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGAATATTGCGAGTGTTaGGTGTTGATTAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: NALRETWRLCTATKSGGGEYCEC*VLIKDA
Trigger: AGCATCTTTAATCAACACTCAACACTCGCAATATTC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCCTCTTTCCGGCTTGTaGACGGAATTCAGCATGCGG +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLPLSGL*TEFSMR
Trigger: CCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCCTGTCCAGCGTGGATaGATGCACGACTTTGGTCCG +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTPVQRG*MHDFGP
Trigger: CGGACCAAAGTCGTGCATGCATCCACGCTGGACAGG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCATGGGAGAGGCAGTGTTaGTGTTTGCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAWERQC*CLHRSH
Trigger: GTGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCA...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCACGGCAAACGTGGACTaGCCACTCAGGACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTTANVD*PLRTGS
Trigger: AGACCCTGTCCTGAGTGGGCAGTCCACGTTTGCCGT...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGTGTGACTGGAACCATTaGTACTGCCCACCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLCDWNH*YCPPVL
Trigger: AAGGACTGGTGGGCAGTAGCAATGGTTCCAGTCACA...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAATGGCGTCTCTGCACTaGAACCAAAAGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAMASLH*NQKWRW
Trigger: CCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCAT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGGAGACATGGCGTCTCTaGACTGCAACCAAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGETWRL*TATKSG
Trigger: TCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTC...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGGAGACATGGCGTCTCTaGACTGCAACCAAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMETWRL*TATKSG
Trigger: TCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTC...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCAACCAAAACCAGACTTaGACAGATCTCGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFNQNQT*TDLAAL
Trigger: GAGAGCTGCGAGATCTGTGCAAGTCTGGTTTTGGTT...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAGGGATTGCCAGGACTTaGACTCTGAAGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASGIART*TLKLLW
Trigger: CCACAGCAGCTTCAGAGTCCAAGTCCTGGCAATCCC...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGAGGCAACTTTGGTGTTaGCTGTGTACAGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMRQLWC*LCTEQS
Trigger: GGACTGCTCTGTACACAGCCAACACCAAAGTTGCCT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTGGGGGCTGGGCAGCTaGGCAACGTGGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFWGLGS*ATWPCW
Trigger: CCAACATGGCCACGTTGCCCAGCTGCCCAGCCCCCA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGGGCGCGGTGACCAGTaGCCCCGCAGTTGTAACAAG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRGRGDQ*PRSCNK
Trigger: CTTGTTACAACTGCGGGGCCACTGGTCACCGCGCCC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGTTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGFLGSP*EIKQLA
Trigger: TGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAA...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAAACCCAGTTCCCATCTaGCAAGTGCCTAAAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASNPVPI*QVPKAP
Trigger: CGGGGCTTTAGGCACTTGCCAGATGGGAACTGGGTT...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCTCCGTGGAATGTGCTaGTGTGTGCAGGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTLRGMC*CVQGIL
Trigger: GAGAATGCCCTGCACACATCAGCACATTCCACGGAG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCAGGCACCGTCTCTCTaGCTTCTCCTTTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTQAPSL*LLLFQL
Trigger: GAGCTGGAAAAGGAGAAGTCAGAGAGACGGTGCCTG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGTGGAGTCTCTTGCACTaGCTGTTCTCAGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLWSLLH*LFSEEF
Trigger: AAACTCCTCTGAGAACAGTCAGTGCAAGAGACTCCA...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACTTGTTACAACGCACGTaGGGCCGCGGCGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNLLQRT*GRGGWP
Trigger: TGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAA...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCCTCTTTCCGGCTTGTaGACGGAATTCAGCATGCGG +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTPLSGL*TEFSMR
Trigger: CCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGCCGGGGGTTTATTATTaGAGGGGGCACACTTATTTG +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMPGVYY*RGHTYL
Trigger: CAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGG...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAGGCCCACTGGCATACTaGTCATTGCAGAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAGPLAY*SLQKRQ
Trigger: TTGCCTTTTCTGCAATGAGCAGTATGCCAGTGGGCC...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCACGCCACCGCCACTGCTaGTATAGAAACTGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASRHRHC*YRNCFQ
Trigger: CTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCG...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGTCTTTGGAAGTCACCTaGATGCTGGAAATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWSLEVT*MLEMAA
Trigger: GGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGA...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGCAGCGACTCCTCCGTaGAATGTGCTGATGTGTGCA +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTAATPP*NVLMCA
Trigger: TGCACACATCAGCACATTCCACGGAGGAGTCGCTGC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTGCACAGGGAGAACCTaGGCCGTGGGTCTGGCGGAA +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFCTGRT*AVGLAE
Trigger: TTCCGCCAGACCCACGGCCCAGGTTCTCCCTGTGCA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGGTGGCCTGATGGATTaGAGCTGGCCTCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTGGLMD*SWPHSA
Trigger: TGCAGAATGAGGCCAGCTCCAATCCATCAGGCCACC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCAGACTGTGGGTGACATaGAGCTGCTCTCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTRLWVT*SCSPKA
Trigger: GGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCT...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAAGGCAACTTTGGTGTTaGCTGTGTACAGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNARQLWC*LCTEQS
Trigger: GGACTGCTCTGTACACAGCCAACACCAAAGTTGCCT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCAGAAAAGGCAACTTTaGTGTTGGCTGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREQKRQL*CWLCTE
Trigger: CTCTGTACACAGCCAACACCAAAGTTGCCTTTTCTG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGGCAGCTGGGCAACGTaGCCATGTTGGCAAAGGACG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRGSWAT*PCWQRT
Trigger: CGTCCTTTGCCAACATGGCCACGTTGCCCAGCTGCC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGAACCAAAAGTGGAGGTaGCCGATCTCACCAGCCACA +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLNQKWR*PISPAT
Trigger: TGTGGCTGGTGAGATCGGCCACCTCCACTTTTGGTT...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCACTGCAACCAAAAGTaGAGGTGGCCGATCTCACCA +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLHCNQK*RWPISP
Trigger: TGGTGAGATCGGCCACCTCCACTTTTGGTTGCAGTG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAGTTCTCAGAGGAGTTTaGCTCCCAGAACCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASVLRGV*LPEPQR
Trigger: TCTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAAC...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCATTCTTGGGGAGCCCGTaGGAGATAAAGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAFLGSP*EIKQLA
Trigger: TGCAAGTTGCTTTATCTCCCACGGGCTCCCCAAGAA...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAGACCTTGGTGGCTTTTaGAGAGATGCATCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASDLGGF*RDASEL
Trigger: GAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTC...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGACATGAGGATGGCAGGTaGTGTGTCCATCTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRHEDGR*CVHLGP
Trigger: CGGACCCAGATGGACACATCACCTGCCATCCTCATG...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGCTCCAGCTGGGTCTTaGGCTTCTTCTTTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRAPAGS*ASSLPP
Trigger: TGGGGGCAAAGAAGAAGCTCAAGACCCAGCTGGAGC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATGGGTGTGATGTGTaGGGCTGCGCTCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRDGCDV*GCAQHL
Trigger: CAGATGCTGAGCGCAGCCTCACACATCACACCCATC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGAATATTGCGAGTGTTaGGTGTTGATTAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGEYCEC*VLIKDA
Trigger: AGCATCTTTAATCAACACTCAACACTCGCAATATTC...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGGAATGTGCTGATGTGTaGAGGGCATTCTCCAAACTA +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMECADV*RAFSKL
Trigger: TAGTTTGGAGAATGCCCTGCACACATCAGCACATTC...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAGTACTCCGAGGAACTaGCTTCCCGGGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNSTPRN*LPGAAG
Trigger: ACCAGCTGCCCCGGGAAGGCAGTTCCTCGGAGTACT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAGGCCCACTGGCATACTaGTCATTGCAGAAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASGPLAY*SLQKRQ
Trigger: TTGCCTTTTCTGCAATGAGCAGTATGCCAGTGGGCC...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCTGCAAAATCCCAACTaGAAGATTTTACCAATCAGT +
Preference number: 4 (lower is better)
Translates to: ELHLENSKLGSRFRPRVALQNPN*KILPIS
Trigger: ACTGATTGGTAAAATCTTGCAGTTGGGATTTTGCAG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAAGGCAACTTTGGTGTTaGCTGTGTACAGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASRQLWC*LCTEQS
Trigger: GGACTGCTCTGTACACAGCCAACACCAAAGTTGCCT...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTCTGCCCACCAGTCCTTaGGTCTGGTACACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFLPTSP*VWYTPA
Trigger: AGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAG...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACAACCTAAAAGTACCTaGCCGGTTGAAGTCCATGGA +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAQPKST*PVEVHG
Trigger: TCCATGGACTTCAACCGGCCAGGTACTTTTAGGTTG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGTCCAGACTTTCTGCTaGAGGGGCGTATTTCAACCT +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLVQTFC*RGVFQP
Trigger: AGGTTGAAATACGCCCCTCCAGCAGAAAGTCTGGAC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGACCTTGGTGGCTTTTaGAGAGATGCATCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTDLGGF*RDASEL
Trigger: GAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTTCCTTGGTGAACAGTaGAGCAATGTTAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: SIFSALCSSYLQLTILDFFLGEQ*SNVNLW
Trigger: CCAAAGGTTAACATTGCTCCACTGTTCACCAAGGAA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGCAGCTAAGCAAGGAATaGGTTTCTCCAAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLQLSKE*VSPSSL
Trigger: AAGAGAACTTGGAGAAACTCATTCCTTGCTTAGCTG...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTCATGAGGATGGCAGGTaGTGTGTCCATCTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFHEDGR*CVHLGP
Trigger: CGGACCCAGATGGACACATCACCTGCCATCCTCATG...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGCTCCAGCTGGGTCTTaGGCTTCTTCTTTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFAPAGS*ASSLPP
Trigger: TGGGGGCAAAGAAGAAGCTCAAGACCCAGCTGGAGC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTGCTGCACATGGGACTaGAGGGCAAGAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFCCTWD*RARRGR
Trigger: CCTTCCCCTTCTTGCCCTTCAGTCCCATGTGCAGCA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGATACTCTCAAAGCTTTaGCGACTATGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLILSKL*RLWILW
Trigger: CCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTAT...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAGCTTTCAGTGCCACCTaGCTCATTCTTTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASAFSAT*LILWKS
Trigger: TGACTTCCAAAGAATGAGTCAGGTGGCACTGAAAGC...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTGAATGTGCTGATGTGTaGAGGGCATTCTCCAAACTA +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASECADV*RAFSKL
Trigger: TAGTTTGGAGAATGCCCTGCACACATCAGCACATTC...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCACTTGAGCTTCTTCTTTaGCCCCATGGTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASLELLL*PHGKRL
Trigger: GAGTCTCTTACCATGGGGGCAAAGAAGAAGCTCAAG...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGTTAGGACAGGAAGTTTaGCCAGAAATGGCAGAATCA +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMLGQEV*PEMAES
Trigger: TGATTCTGCCATTTCTGGGCAAACTTCCTGTCCTAA...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGATTATTGGAGTCTCTTaGACTGACTGTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMIIGVS*TDCSQR
Trigger: CCTCTGAGAACAGTCAGTGCAAGAGACTCCAATAAT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTTCCCATCTGGCAAGTaGCTAAAGCCCCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFFPSGK*LKPRSA
Trigger: GGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGGAA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACTTCAGAGGAAGATTTaGTTACTGATGTTATTGAAG +
Preference number: 4 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGLQRKI*LLMLLK
Trigger: CTTCAATAACATCAGTAACCAAATCTTCCTCTGAAG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTTTTTCCAGCTCCAGCTaGGTCTTGAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASFSSSS*VLSFFF
Trigger: AAAGAAGAAGCTCAAGACCCAGCTGGAGCTGGAAAA...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGTTTTCCAGCTCCAGCTaGGTCTTGAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWFSSSS*VLSFFF
Trigger: AAAGAAGAAGCTCAAGACCCAGCTGGAGCTGGAAAA...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACAGAAAAGGCAACTTTaGTGTTGGCTGTGTACAGAG +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAQKRQL*CWLCTE
Trigger: CTCTGTACACAGCCAACACCAAAGTTGCCTTTTCTG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGAAGTTCTGCATGGGTaGCACGGCAAACGTGGACTG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPREVLHG*HGKRGL
Trigger: CAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACCACGTTCAAGACGACTaGCAGCTCCGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNHVQDD*QLRRGL
Trigger: AAGGCCTCTGCGGAGCTGCCAGTCGTCTTGAACGTG...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGCCAAGACAGAGTCTGTaGTATAAACTAACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMPRQSL*YKLTVL
Trigger: CAGCACAGTTAGTTTATACCACAGACTCTGTCTTGG...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGAACTGCTCTTCAAATTaGACGCTCACATCACAAGGC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLNCSSN*TLTSQG
Trigger: GCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTT...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGACGTCCATCATGGCGCTaGCAAAGCTCTTGTCCACTT +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRRPSWR*QSSCPL
Trigger: AAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACG...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTTGGCATACTGCTCATTaGAGAAAAGGCAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: ETLISDRLQRAKTWHMASWHTAH*RKGNFG
Trigger: ACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCA...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGGTCTGGTACACCCCTaGTGTCCCTGCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFGLVHP*CPCHEV
Trigger: AACTTCATGGCAGGGACAGCAGGGGTGTACCAGACC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACTCTCAAGTCCAAGTGTaGGGCTCCCTCCGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNSQVQV*GSLRKE
Trigger: CTCTTTCCGGAGGGAGCCGCACACTTGGACTTGAGA...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTACTCTGAAGCTGCTGTaGGGGAGAGGAAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFTLKLL*GRGSAE
Trigger: CTCAGCACTTCCTCTCCCCCACAGCAGCTTCAGAGT...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGCAGCACGTCCATCATaGCGCTGCCAAAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFAARPS*RCQSSC
Trigger: ACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTGC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACGCAGCACGTCCATCATaGCGCTGCCAAAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNAARPS*RCQSSC
Trigger: ACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTGC...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAGACTGTGGGTGACATaGAGCTGCTCTCCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNRLWVT*SCSPKA
Trigger: GGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGATCAAAATAGTTACGTaGGTAACAACAGACGCTTTC +
Preference number: 4 (lower is better)
Translates to: FVHVRLTHVMRACYNAREIKIVT*VTTDAF
Trigger: GAAAGCGTCTGTTGTTACCCACGTAACTATTTTGAT...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTACGCGCCGACCTTGGTaGCTTTTGGAGAGATGCATC +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFTRRPW*LLERCI
Trigger: GATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGT...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTCAAAGGGCAAAGACGTaGCACATGGCCAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFQRAKT*HMASAT
Trigger: TGTGGCACTGGCCATGTGCCACGTCTTTGCCCTTTG...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGCCAAGACAGAGTCTGTaGTATAAACTAACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWPRQSL*YKLTVL
Trigger: CAGCACAGTTAGTTTATACCACAGACTCTGTCTTGG...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGTTCCTTGGTGAACAGTaGAGCAATGTTAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWFLGEQ*SNVNLW
Trigger: CCAAAGGTTAACATTGCTCCACTGTTCACCAAGGAA...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGATGGCGGAACTGGAAGTaGAGTGATTCAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRWRNWK*SDSAAS
Trigger: TGATGCTGCTGAATCACTTCACTTCCAGTTCCGCCA...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAGGGCTCAAAGCCACTaGCTGGCTGGGAAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNRAQSH*LAGKKD
Trigger: ATCTTTCTTCCCAGCCAGTCAGTGGCTTTGAGCCCT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGGACTGTATCATTGTTaGAATGTCTGTCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLGLYHC*NVCLRC
Trigger: ACACCTGAGACAGACATTTCAACAATGATACAGTCC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGTTCATTTCCGTGGGTTaGAATTTAGAGATCTACAGT +
Preference number: 4 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLFISVG*NLEIYS
Trigger: ACTGTAGATCTCTAAATTTCAACCCACGGAAATGAA...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTCATCTACCTCAACGCTaGATGGCAGGCTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFHLPQR*MAGSKL
Trigger: CAACTTGGAGCCTGCCATTCAGCGTTGAGGTAGATG...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGCTCCTACTTACAGCTaGCGATTCTCGACTTCGGAC +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFAPTYS*RFSTSD
Trigger: GTCCGAAGTCGAGAATCGTCAGCTGTAAGTAGGAGC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGTTTCAACACTCACTTTaGTGTGTTTTCCTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLFQHSL*CVFLRA
Trigger: GGCCCTTAGGAAAACACAGCAAAGTGAGTGTTGAAA...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCATGGCATACTGCTCATTaGAGAAAAGGCAACTTTGGT +
Preference number: 4 (lower is better)
Translates to: SMKLGTALQIERSHHKASWHTAH*RKGNFG
Trigger: ACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCA...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCATTTCATGCTGCTTCTTaGTCCAGATCCTTTATTCCT +
Preference number: 4 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAFHAAS*SRSFIP
Trigger: AGGAATAAAGGATCTGGACCAAGAAGCAGCATGAAA...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGTTCTCAGAGGAGTTTaGCTCCCAGAACCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFVLRGV*LPEPQR
Trigger: TCTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAAC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAAAGAGGCCTCACGGATaGGTGGTTCCATTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRKRPHG*VVPFSL
Trigger: CAGAGAAAATGGAACCACCCATCCGTGAGGCCTCTT...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGATTCCCGCTCTTTTTGTaGCTGGAACCATTGCTACTG +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRFPLFL*LEPLLL
Trigger: CAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAA...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGATGGAGTCTCTTGCACTaGCTGTTCTCAGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRWSLLH*LFSEEF
Trigger: AAACTCCTCTGAGAACAGTCAGTGCAAGAGACTCCA...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGATCTGTTCCAGCTGGGTaGTGTTTAGGCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRSVPAG*CLGKVT
Trigger: AGTGACTTTGCCTAAACATCACCCAGCTGGAACAGA...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGCTTTCAGTGCCACCTaGCTCATTCTTTGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRAFSAT*LILWKS
Trigger: TGACTTCCAAAGAATGAGTCAGGTGGCACTGAAAGC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGACTTGAGCTTCTTCTTTaGCCCCATGGTAAGAGACTC +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRLELLL*PHGKRL
Trigger: GAGTCTCTTACCATGGGGGCAAAGAAGAAGCTCAAG...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGGGGGCACACTTATTTaGACATTATTAGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTGGTLI*TLLGQE
Trigger: TTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTAGTGCCACACCTACCTaGTTGCCACAGCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFSATPT*LPQHSE
Trigger: TTCAGAATGCTGTGGCAACCAGGTAGGTGTGGCACT...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGCAATAAATCGAGTTTaGTGCACTTCTACGCTAGAT +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTAINRV*CTSTLD
Trigger: ATCTAGCGTAGAAGTGCATCAAACTCGATTTATTGC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTGGAGTCTCTTGCACTaGCTGTTCTCAGAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFWSLLH*LFSEEF
Trigger: AAACTCCTCTGAGAACAGTCAGTGCAAGAGACTCCA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGTTCATTTCCGTGGGTTaGAATTTAGAGATCTACAGT +
Preference number: 4 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLFISVG*NLEIYS
Trigger: ACTGTAGATCTCTAAATTTCAACCCACGGAAATGAA...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAAACTGCTCTTCAAATTaGACGCTCACATCACAAGGC +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRNCSSN*TLTSQG
Trigger: GCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTT...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTGCTGCTATAGAAACTaGTTTCAGGGACGGAGGACA +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFCCYRN*FQGRRT
Trigger: TGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGCTTCAGAGGAAGATTTaGTTACTGATGTTATTGAAG +
Preference number: 4 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWLQRKI*LLMLLK
Trigger: CTTCAATAACATCAGTAACCAAATCTTCCTCTGAAG...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAGCCTCTGTTCCAGCTaGGTGATGTTTAGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNSLCSS*VMFRQS
Trigger: ACTTTGCCTAAACATCACCCAGCTGGAACAGAGGCT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR GCA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCTGCAAAATCCCAACTaGAAGATTTTACCAATCAGT +
Preference number: 4 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTLQNPN*KILPIS
Trigger: ACTGATTGGTAAAATCTTGCAGTTGGGATTTTGCAG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACTTTTCCAGCTCCAGCTaGGTCTTGAGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNFSSSS*VLSFFF
Trigger: AAAGAAGAAGCTCAAGACCCAGCTGGAGCTGGAAAA...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
3UTR CAA 72 bp AGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTaGGGCAATAAAGGACCTAGAATTCTAAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: RQSLWYKLTVLT*GNKGPRILSTE
Trigger: TTCAGTACTTAGAATTCTAGGTCCTTTATTGCCCAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR TCA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGCAATAAATCGAGTTTaGTGCACTTCTACGCTAGAT +
Preference number: 4 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRAINRV*CTSTLD
Trigger: ATCTAGCGTAGAAGTGCATCAAACTCGATTTATTGC...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTATACTCTCAAAGCTTTaGCGACTATGGATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFILSKL*RLWILW
Trigger: CCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTAT...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGGACTGTATCATTGTTaGAATGTCTGTCTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFGLYHC*NVCLRC
Trigger: ACACCTGAGACAGACATTTCAACAATGATACAGTCC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTTTCAACACTCACTTTaGTGTGTTTTCCTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFFQHSL*CVFLRA
Trigger: GGCCCTTAGGAAAACACAGCAAAGTGAGTGTTGAAA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR GCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACCCAAACATCACGTTCTaGTTCCATCTCTACATTCCA +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNPNITF*FHLYIP
Trigger: TGGAATGTAGAGATGGAAGCAGAACGTGATGTTTGG...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTTTCCTTGGTGAACAGTaGAGCAATGTTAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFFLGEQ*SNVNLW
Trigger: CCAAAGGTTAACATTGCTCCACTGTTCACCAAGGAA...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACTTCATTTCCGTGGGTTaGAATTTAGAGATCTACAGT +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNFISVG*NLEIYS
Trigger: ACTGTAGATCTCTAAATTTCAACCCACGGAAATGAA...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR TCA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGAATATTGCGAGTGTTaGGTGTTGATTAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: HSSVVQSLKIPEISANHFEYCEC*VLIKDA
Trigger: AGCATCTTTAATCAACACTCAACACTCGCAATATTC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACTTCCTTATGTCTCCATaGCTTAATAACGTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNFLMSP*LNNVLL
Trigger: CAACAGAACGTTATTAAGCCATGGAGACATAAGGAA...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CCA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACCTTCAGAGGAAGATTTaGTTACTGATGTTATTGAAG +
Preference number: 4 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNLQRKI*LLMLLK
Trigger: CTTCAATAACATCAGTAACCAAATCTTCCTCTGAAG...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GTGATGTGTCCATCTGGGTCCGGTAGGCCAGGGCTGAGCCCGCGCTaGCCGCATGGGAGCAGTGAGGCAAGGGGGCGGCGGAGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: VMCPSGSGRPGLSPR*PHGSSEARGRRSRP
Trigger: CGGCCGGCTCCGCCGCCCCCTTGCCTCACTGCTCCCATGCGGGCAGCGCGGGCTCAGCCCTGGCCTACCGGACCCAGATGGACACATCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000565193.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GCGGCGGAGCCGGCCGGGTGCTGCCCGTGGTGCTGGGCTCCGCTCTaGGAGGACGGGATACCAGCCACTCCACACACAGGCCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: AAEPAGCCPWCWAPL*EDGIPATPHTGLPD
Trigger: GTCTGGAAGGCCTGTGTGTGGAGTGGCTGGTATCCCGTCCTCGCAGAGCGGAGCCCAGCACCACGGGCAGCACCCGGCCGGCTCCGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GGGCGGCGTGGAGGACTGTGCTGGGCGTCCCCGTGGCGGCCGTGCTaGTCTCCACGACCAGGGCCGGTTGCTGTGCTGTCTTCAGCACCC +
Preference number: 5 (lower is better)
Translates to: GRRGGLCWASPWRPC*SPRPGPVAVLSSAP
Trigger: GGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GACGGGCGGCGTGGAGGACTGTGCTGGGCGTCCCCGTGGCGGCCGTaGTGGTCTCCACGACCAGGGCCGGTTGCTGTGCTGTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: DGRRGGLCWASPWRP*WSPRPGPVAVLSSA
Trigger: TGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCGCCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GGTCCTGCGGGAGCCTGGTGGGCGCGGCCATGGCGCGCGCTTACCTaGCCGGTTGAAGTCCATGGACGGCTGTTTGCAGTCCTGGGCGCG +
Preference number: 5 (lower is better)
Translates to: GPAGAWWARPWRALT*PVEVHGRLFAVLGA
Trigger: CGCGCCCAGGACTGCAAACAGCCGTCCATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCCCGCAGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS TCA 90 bp GGGAGCCTGGTGGGCGCGGCCATGGCGCGCGCTTACCTGGCCGGTTaGAGTCCATGGACGGCTGTTTGCAGTCCTGGGCGCGGTGACCAG +
Preference number: 5 (lower is better)
Translates to: GSLVGAAMARAYLAG*SPWTAVCSPGRGDQ
Trigger: CTGGTCACCGCGCCCAGGACTGCAAACAGCCGTCCATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS GCA 90 bp GGCGTCCCCGTGGCGGCCGTGCTGGTCTCCACGACCAGGGCCGGTTaGTGTGCTGTCTTCAGCACCCTGTCCAGCGTGGATGCATGCACG +
Preference number: 5 (lower is better)
Translates to: GVPVAAVLVSTTRAG*CAVFSTLSSVDACT
Trigger: CGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GGAACAGATGACGACAGCAGCAGTTTGATGGGCGGACGGGCGGCGTaGAGGACTGTGCTGGGCGTCCCCGTGGCGGCCGTGCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GTDDDSSSLMGGRAA*RTVLGVPVAAVLVS
Trigger: GGAGACCAGCACGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCGCCCGTCCGCCCATCAAACTGCTGCTGTCGTCATCTGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GACATGGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCTaGTGGGGTGCGGACGCGGGCAGCACGTCCATCATGGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: DMELLSESPERTCTG*WGADAGSTSIMALP
Trigger: TGGCAGCGCCATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp CATGGGTGGCACGGCAAACGTGGACTGCCCACTCAGGACAGGGTCTaGGGTCCCGCTGCTGCTGTAAGGGGCGTGCACGACGGGGAAGGT +
Preference number: 5 (lower is better)
Translates to: HGWHGKRGLPTQDRV*GPAAAVRGVHDGEG
Trigger: ACCTTCCCCGTCGTGCACGCCCCTTACAGCAGCAGCGGGACCCCAGACCCTGTCCTGAGTGGGCAGTCCACGTTTGCCGTGCCACCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp GAGGAGCTGGAGTACTCCGAGGAACTGCCTTCCCGGGGCAGCTGGTaGTGGGGCTGCTCCACTTCCACCCGCAGCTCTGCTGCATGGCTG +
Preference number: 5 (lower is better)
Translates to: EELEYSEELPSRGSW*WGCSTSTRSSAAWL
Trigger: CAGCCATGCAGCAGAGCTGCGGGTGGAAGTGGAGCAGCCCCATCACCAGCTGCCCCGGGAAGGCAGTTCCTCGGAGTACTCCAGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GCTGCTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCTGGTGGGGTaGGGACGCGGGCAGCACGTCCATCATGGCGCTGCCAAAGCTCTT +
Preference number: 5 (lower is better)
Translates to: AALRKPREDLHRLVG*GRGQHVHHGAAKAL
Trigger: AAGAGCTTTGGCAGCGCCATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp CCCCGTGGCGGCCGTGCTGGTCTCCACGACCAGGGCCGGTTGCTGTaGTGTCTTCAGCACCCTGTCCAGCGTGGATGCATGCACGACTTT +
Preference number: 5 (lower is better)
Translates to: PRGGRAGLHDQGRLL*CLQHPVQRGCMHDF
Trigger: AAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp ATGGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCTGGTaGGGTGCGGACGCGGGCAGCACGTCCATCATGGCGCTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: MELLSESPERTCTGW*GADAGSTSIMALPK
Trigger: CTTTGGCAGCGCCATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GCATTTGTGTGCACTGGTCCTGCGGGAGCCTGGTGGGCGCGGCCATaGCGCGCGCTTACCTGGCCGGTTGAAGTCCATGGACGGCTGTTT +
Preference number: 5 (lower is better)
Translates to: AFVCTGPAGAWWARP*RALTWPVEVHGRLF
Trigger: AAACAGCCGTCCATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCCCGCAGGACCAGTGCACACAAATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS GCA 90 bp ACTGTGGGTGACATGGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTaGACAGGCTGGTGGGGTGCGGACGCGGGCAGCACGTCCATCATG +
Preference number: 5 (lower is better)
Translates to: TVGDMELLSESPERT*TGWWGADAGSTSIM
Trigger: CATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCGACGACAGCAGCAGTTaGATGGGCGGACGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LQTRRPWWLLERCIRARCDDSSS*MGGRAA
Trigger: CGCCGCCCGTCCGCCCATCAAACTGCTGCTGTCGTC...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GAATGTTTCCTGTGGAGCCGCCACCGCCACTGCTGCTATAGAAACTaGTTTCAGGGACGGAGGACAGCGCCGGGCTGGAGCTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ECFLWSRHRHCCYRN*FQGRRTAPGWSWGL
Trigger: CAGCCCCCAGCTCCAGCCCGGCGCTGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAGGAAACATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GTGATGTGTGAGGCTGCGCTCAGCATCTGCGGGGGCAGGGGGTGGTaGCCTGATGGATTGGAGCTGGCCTCATTCTGCACAGGGAGAACC +
Preference number: 5 (lower is better)
Translates to: VMCEAALSICGGRGW*PDGLELASFCTGRT
Trigger: GGTTCTCCCTGTGCAGAATGAGGCCAGCTCCAATCCATCAGGCCACCACCCCCTGCCCCCGCAGATGCTGAGCGCAGCCTCACACATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GGTGTGATGTGTGAGGCTGCGCTCAGCATCTGCGGGGGCAGGGGGTaGTGGCCTGATGGATTGGAGCTGGCCTCATTCTGCACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: GVMCEAALSICGGRG*WPDGLELASFCTGR
Trigger: TCTCCCTGTGCAGAATGAGGCCAGCTCCAATCCATCAGGCCACCACCCCCTGCCCCCGCAGATGCTGAGCGCAGCCTCACACATCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGTTTCCTAAGGGCCTCTaGGGCAGCGACTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: RTASLEMSHAAHARSRRLFPKGL*GSDSSV
Trigger: CACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAAA...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACACGACCAGGGCCGGTaGCTGTGCTGTCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAHDQGR*LCCLQH
Trigger: GTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGT +
Preference number: 5 (lower is better)
Translates to: VMRACYNAREAAADGHCPRVELH*ENSKLG
Trigger: ACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCG...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACGGGGTTGGAGGTTCTaGGGGAGCCCGTGGGAGATA +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSARGWRF*GSPWEI
Trigger: TATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCTCAGACGCGCCGACCTaGGTGGCTTTTGGAGAGATG +
Preference number: 5 (lower is better)
Translates to: VMRACYNAREAAADGHCPSDAPT*VAFGEM
Trigger: CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGA...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCCCACTGCCCCCTTCCTaGGTGAACAGTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: VMRACYNAREAAADGHCPPLPPS*VNSGAM
Trigger: CATTGCTCCACTGTTCACCAAGGAAGGGGGCAGTGG...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp TCCCTCTTTCCGGCTTGTGCACGGAATTCAGCATGCGGATGGGTGTaGTGTGTGAGGCTGCGCTCAGCATCTGCGGGGGCAGGGGGTGGT +
Preference number: 5 (lower is better)
Translates to: SLFPACARNSACGWV*CVRLRSASAGAGGG
Trigger: ACCACCCCCTGCCCCCGCAGATGCTGAGCGCAGCCTCACACATCACACCCATCCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp CGACTTTGGTCCGGGGACCAAAGGAGACTGTGGGTGACATGGAGCTaGTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCTGGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RLWSGDQRRLWVTWS*SPKAQRGPAQAGGV
Trigger: CACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GCTACTGCCCACCAGTCCTTGGGTCTGGTACACCCCTGCTGTCCCTaGCATGAAGTTCTGCATGGGTGGCACGGCAAACGTGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: ATAHQSLGLVHPCCP*HEVLHGWHGKRGLP
Trigger: GGGCAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp CCTGCACAGGCTGGTGGGGTGCGGACGCGGGCAGCACGTCCATCATaGCGCTGCCAAAGCTCTTGTCCACTTTCATGCTGCTTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: PAQAGGVRTRAARPS*RCQSSCPLSCCFLV
Trigger: GACCAAGAAGCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp CGACCAGGGCCGGTTGCTGTGCTGTCTTCAGCACCCTGTCCAGCGTaGATGCATGCACGACTTTGGTCCGGGGACCAAAGGAGACTGTGG +
Preference number: 5 (lower is better)
Translates to: RPGPVAVLSSAPCPA*MHARLWSGDQRRLW
Trigger: CCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp TGGGCAACGTGGCCATGTTGGCAAAGGACGTGGAGGGGTGGCTGCTaGGAGAGGCAGTGTTGCTGTTTGCACAGAAGCCACCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: WATWPCWQRTWRGGC*ERQCCCLHRSHPAG
Trigger: CCCTGCAGGGTGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGTCCTTTGCCAACATGGCCACGTTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GGTCTGGTACACCCCTGCTGTCCCTGCCATGAAGTTCTGCATGGGTaGCACGGCAAACGTGGACTGCCCACTCAGGACAGGGTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GLVHPCCPCHEVLHG*HGKRGLPTQDRVWG
Trigger: ACCCCAGACCCTGTCCTGAGTGGGCAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATTTCCTAAGGGCCTCTaGGGCAGCGACTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAFPKGL*GSDSSV
Trigger: CACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAAA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGGGCAACGTGGCCATGTaGGCAAAGGACGTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKGNVAM*AKDVEG
Trigger: CCCCTCCACGTCCTTTGCCAACATGGCCACGTTGCC...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCGGCAACGTGGCCATGTaGGCAAAGGACGTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: LQTRRPWWLLERCIRARCGNVAM*AKDVEG
Trigger: CCCCTCCACGTCCTTTGCCAACATGGCCACGTTGCC...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGACTGCCCACCAGTCCTaGGGTCTGGTACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMTAHQS*GLVHPC
Trigger: GCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGT...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGTAGCTGCCCTGGAATaGACGTGTGAGCCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: RTASLEMSHAAHARSRRLVAALE*TCEPRR
Trigger: CCTCCTAGGCTCACACGTCAATTCCAGGGCAGCTAC...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp TGCCCACCAGTCCTTGGGTCTGGTACACCCCTGCTGTCCCTGCCATaGAGTTCTGCATGGGTGGCACGGCAAACGTGGACTGCCCACTCA +
Preference number: 5 (lower is better)
Translates to: CPPVLGSGTPLLSLP*SSAWVARQTWTAHS
Trigger: TGAGTGGGCAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp AGCTGGGCAACGTGGCCATGTTGGCAAAGGACGTGGAGGGGTGGCTaGTGGGAGAGGCAGTGTTGCTGTTTGCACAGAAGCCACCCTGCA +
Preference number: 5 (lower is better)
Translates to: SWATWPCWQRTWRGG*WERQCCCLHRSHPA
Trigger: TGCAGGGTGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGTCCTTTGCCAACATGGCCACGTTGCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GATTCGAGGCAGGAATGTTTCCTGTGGAGCCGCCACCGCCACTGCTaGTATAGAAACTGCTTTCAGGGACGGAGGACAGCGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: DSRQECFLWSRHRHC*YRNCFQGRRTAPGW
Trigger: CCAGCCCGGCGCTGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTGCCTCGAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp TCGGATTCGAGGCAGGAATGTTTCCTGTGGAGCCGCCACCGCCACTaGTGCTATAGAAACTGCTTTCAGGGACGGAGGACAGCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SDSRQECFLWSRHRH*CYRNCFQGRRTAPG
Trigger: GCCCGGCGCTGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTGCCTCGAATCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp AGTCCTTGGGTCTGGTACACCCCTGCTGTCCCTGCCATGAAGTTCTaGATGGGTGGCACGGCAAACGTGGACTGCCCACTCAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: SPWVWYTPAVPAMKF*MGGTANVDCPLRTG
Trigger: CCCTGTCCTGAGTGGGCAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp CATAAAAACCAAGCATTTGTGTGCACTGGTCCTGCGGGAGCCTGGTaGGCGCGGCCATGGCGCGCGCTTACCTGGCCGGTTGAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: HKNQAFVCTGPAGAW*ARPWRALTWPVEVH
Trigger: ATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCCCGCAGGACCAGTGCACACAAATGCTTGGTTTTTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS CCA 90 bp CTTCATAAAAACCAAGCATTTGTGTGCACTGGTCCTGCGGGAGCCTaGTGGGCGCGGCCATGGCGCGCGCTTACCTGGCCGGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: LHKNQAFVCTGPAGA*WARPWRALTWPVEV
Trigger: GACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCCCGCAGGACCAGTGCACACAAATGCTTGGTTTTTATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS-3UTR CAA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGAGGGATTGCCAGGACTaGGACTCTGAAGCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: RTASLEMSHAAHARSRRLRDCQD*DSEAAV
Trigger: CACAGCAGCTTCAGAGTCCAAGTCCTGGCAATCCCT...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATGGTGGCCTGATGGATaGGAGCTGGCCTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAWWPDG*ELASFC
Trigger: GCAGAATGAGGCCAGCTCCAATCCATCAGGCCACCA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGGCAACGTGGCCATGTaGGCAAAGGACGTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFGNVAM*AKDVEG
Trigger: CCCCTCCACGTCCTTTGCCAACATGGCCACGTTGCC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGTAGCTGCCCTGGAATaGACGTGTGAGCCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAVAALE*TCEPRR
Trigger: CCTCCTAGGCTCACACGTCAATTCCAGGGCAGCTAC...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCGGGGTTGGAGGTTCTaGGGGAGCCCGTGGGAGATA +
Preference number: 5 (lower is better)
Translates to: LFRRADLGGFWRDASELARGWRF*GSPWEI
Trigger: TATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCATCAGACGCGCCGACCTaGGTGGCTTTTGGAGAGATG +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSASDAPT*VAFGEM
Trigger: CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGA...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp GGATGCATGCACGACTTTGGTCCGGGGACCAAAGGAGACTGTGGGTaGCATGGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: GCMHDFGPGTKGDCG*HGAALRKPREDLHR
Trigger: CCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GCCGGTTGCTGTGCTGTCTTCAGCACCCTGTCCAGCGTGGATGCATaGACGACTTTGGTCCGGGGACCAAAGGAGACTGTGGGTGACATG +
Preference number: 5 (lower is better)
Translates to: AGCCAVFSTLSSVDA*TTLVRGPKETVGDM
Trigger: CATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp CATGCACGACTTTGGTCCGGGGACCAAAGGAGACTGTGGGTGACATaGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCTGGT +
Preference number: 5 (lower is better)
Translates to: HARLWSGDQRRLWVT*SCSPKAQRGPAQAG
Trigger: ACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GCGTGGATGCATGCACGACTTTGGTCCGGGGACCAAAGGAGACTGTaGGTGACATGGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTGCA +
Preference number: 5 (lower is better)
Translates to: AWMHARLWSGDQRRL*VTWSCSPKAQRGPA
Trigger: TGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAAGGCAGTGTTGCTGTTaGCACAGAAGCCACCCTGCA +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSARQCCC*HRSHPA
Trigger: TGCAGGGTGGCTTCTGTGCAAACAGCAACACTGCCT...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAAAAGTACCTGGCCGGTaGAAGTCCATGGACGGCTGT +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAKVPGR*KSMDGC
Trigger: ACAGCCGTCCATGGACTTCAACCGGCCAGGTACTTT...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCGTAGCTGCCCTGGAATaGACGTGTGAGCCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: LQTRRPWWLLERCIRARCVAALE*TCEPRR
Trigger: CCTCCTAGGCTCACACGTCAATTCCAGGGCAGCTAC...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGT +
Preference number: 5 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKRVELH*ENSKLG
Trigger: ACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCG...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCACGACCTTGGTGGCTTTaGGAGAGATGCATCCGAGCT +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSARPWWL*ERCIRA
Trigger: AGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCG...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCCATCTGGCAAGTGCCTAAAGCCCCGCTCAGCCTCTGTTCCAGCTGGGTGATGTCAGACGCGCCGACCTaGGTGGCTTTTGGAGAGATG +
Preference number: 5 (lower is better)
Translates to: PIWQVPKAPLSLCSSWVMSDAPT*VAFGEM
Trigger: CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGA...CATCACCCAGCTGGAACAGAGGCTGAGCGGGGCTTTAGGCACTTGCCAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS GCA 90 bp GAAGACGAGAGGAGCTTCATGTCCGCGCTCCCTCTTTCCGGCTTGTaGACGGAATTCAGCATGCGGATGGGTGTGATGTGTGAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: EDERSFMSALPLSGL*TEFSMRMGVMCEAA
Trigger: CGCAGCCTCACACATCACACCCATCCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGGGAGCGCGGACATGAAGCTCCTCTCGTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GGAACCATTGCTACTGCCCACCAGTCCTTGGGTCTGGTACACCCCTaGTGTCCCTGCCATGAAGTTCTGCATGGGTGGCACGGCAAACGT +
Preference number: 5 (lower is better)
Translates to: GTIATAHQSLGLVHP*CPCHEVLHGWHGKR
Trigger: ACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GTGCTGTCTTCAGCACCCTGTCCAGCGTGGATGCATGCACGACTTTaGTCCGGGGACCAAAGGAGACTGTGGGTGACATGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VLSSAPCPAWMHARL*SGDQRRLWVTWSCS
Trigger: AGAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGGTTCTTGGAGTGATCTaGTGGCAGGCTGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKVLGVI*WQAGQV
Trigger: CACTTGCCCAGCCTGCCACAAGATCACTCCAAGAAC...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTTGGTGGCCTGATGGATaGGAGCTGGCCTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFWWPDG*ELASFC
Trigger: GCAGAATGAGGCCAGCTCCAATCCATCAGGCCACCA...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGATGCATGCACGACTTaGGTCCGGGGACCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFDACTT*VRGPKE
Trigger: CTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGAGGCAGTGTTGCTGTTaGCACAGAAGCCACCCTGCA +
Preference number: 5 (lower is better)
Translates to: CESASDKPRGWRFLGSPWRQCCC*HRSHPA
Trigger: TGCAGGGTGGCTTCTGTGCAAACAGCAACACTGCCT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp ACAGGGAGAACCTGGGCCGTGGGTCTGGCGGAACTGGAAGTGAAGTaGTTCAGCAGCATCACCGGCTTCTCCTTGTCAGAGCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: TGRTWAVGLAELEVK*FSSITGFSLSELSK
Trigger: CTTGGAGAGCTCTGACAAGGAGAAGCCGGTGATGCTGCTGAATCACTTCACTTCCAGTTCCGCCAGACCCACGGCCCAGGTTCTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp AGGACAGGAAGTTTGCCCAGAAATGGCAGAATCAGCAGGAACAGATaGCGACAGCAGCAGTTTGATGGGCGGACGGGCGGCGTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RTGSLPRNGRISRNR*RQQQFDGRTGGVED
Trigger: GTCCTCCACGCCGCCCGTCCGCCCATCAAACTGCTGCTGTCGTCATCTGTTCCTGCTGATTCTGCCATTTCTGGGCAAACTTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp TGGCTGCTGGGAGAGGCAGTGTTGCTGTTTGCACAGAAGCCACCCTaGAGGGGGCCCACTGGCATACTGCTCATTGCAGAAAAGGCAACT +
Preference number: 5 (lower is better)
Translates to: WLLGEAVLLFAQKPP*RGPTGILLIAEKAT
Trigger: AGTTGCCTTTTCTGCAATGAGCAGTATGCCAGTGGGCCCCCTGCAGGGTGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCAGCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp GGTGGTGGTGGTGGTGGTTCGGATTCGAGGCAGGAATGTTTCCTGTaGAGCCGCCACCGCCACTGCTGCTATAGAAACTGCTTTCAGGGA +
Preference number: 5 (lower is better)
Translates to: GGGGGGSDSRQECFL*SRHRHCCYRNCFQG
Trigger: TCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTGCCTCGAATCCGAACCACCACCACCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTCTCCCTCTTTCCGGCTaGTGCACGGAATTCAGCATG +
Preference number: 5 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFLPLSG*CTEFSM
Trigger: CATGCTGAATTCCGTGCACAAGCCGGAAAGAGGGAG...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTCTCCCTCTTTCCGGCTaGTGCACGGAATTCAGCATG +
Preference number: 5 (lower is better)
Translates to: LFRRADLGGFWRDASELALPLSG*CTEFSM
Trigger: CATGCTGAATTCCGTGCACAAGCCGGAAAGAGGGAG...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp AAGGGCCTCTTGGGCAGCGACTCCTCCGTGGAATGTGCTGATGTGTaGAGGGCATTCTCCAAACTATTACTGACACTGCTGACAGGGGCC +
Preference number: 5 (lower is better)
Translates to: KGLLGSDSSVECADV*RAFSKLLLTLLTGA
Trigger: GGCCCCTGTCAGCAGTGTCAGTAATAGTTTGGAGAATGCCCTGCACACATCAGCACATTCCACGGAGGAGTCGCTGCCCAAGAGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGTTCTTGGAGTGATCTaGTGGCAGGCTGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVVLGVI*WQAGQV
Trigger: CACTTGCCCAGCCTGCCACAAGATCACTCCAAGAAC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTACTGCCCACCAGTCCTaGGGTCTGGTACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: ELHLENSKLGSRFRPRVATAHQS*GLVHPC
Trigger: GCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTCGGGGTTGGAGGTTCTaGGGGAGCCCGTGGGAGATA +
Preference number: 5 (lower is better)
Translates to: ELHLENSKLGSRFRPRVARGWRF*GSPWEI
Trigger: TATCTCCCACGGGCTCCCCAAGAACCTCCAACCCCG...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCCGACCTTGGTGGCTTTaGGAGAGATGCATCCGAGCT +
Preference number: 5 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVRPWWL*ERCIRA
Trigger: AGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCG...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp CGCAGTTTCCTAAGCCAGTCTAGAATCCCATTCTGCTCCTGGGTCTaGGGGGTCTGCAGACTGGAAGGCATGAGGATGGCAGGTGATGTG +
Preference number: 5 (lower is better)
Translates to: RSFLSQSRIPFCSWV*GVCRLEGMRMAGDV
Trigger: CACATCACCTGCCATCCTCATGCCTTCCAGTCTGCAGACCCCTCAGACCCAGGAGCAGAATGGGATTCTAGACTGGCTTAGGAAACTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000565193.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGGACGACAGCAGCAGTTaGATGGGCGGACGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGDDSSS*MGGRAA
Trigger: CGCCGCCCGTCCGCCCATCAAACTGCTGCTGTCGTC...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGGACGACAGCAGCAGTTaGATGGGCGGACGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMDDSSS*MGGRAA
Trigger: CGCCGCCCGTCCGCCCATCAAACTGCTGCTGTCGTC...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCTGGGAGAGGCAGTGTaGCTGTTTGCACAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMLGEAV*LFAQKP
Trigger: TGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCAG...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAATACTAAAACCTCTGTaGCGTCCTAAGTCGAGTAGC +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSAILKPL*RPKSSS
Trigger: GCTACTCGACTTAGGACGCAACAGAGGTTTTAGTAT...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCAACTGCTACAAGTGCTaGGAGGAGGGAAGGAAATAC +
Preference number: 5 (lower is better)
Translates to: LQTRRPWWLLERCIRARCNCYKC*EEGRKY
Trigger: GTATTTCCTTCCCTCCTCCAAGCACTTGTAGCAGTT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp AACAAGATAGGTTCCCGCTCTTTTTGTGACTGGAACCATTGCTACTaGCCACCAGTCCTTGGGTCTGGTACACCCCTGCTGTCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: NKIGSRSFCDWNHCY*PPVLGSGTPLLSLP
Trigger: TGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAACCTATCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGAGGGGGCACACTTATTaGCACATTATTAGGACAGGA +
Preference number: 5 (lower is better)
Translates to: CESASDKPRGWRFLGSPWRGHTY*HIIRTG
Trigger: TCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCCT...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GTGATGAGGGCTTGTTACAACGCACGTGAGGCCGCGGCGGATGGCCACTGCCCCTTTCAATATGGATTATaGGAGTCTCTTGCACTGACT +
Preference number: 5 (lower is better)
Translates to: VMRACYNAREAAADGHCPFQYGL*ESLALT
Trigger: AGTCAGTGCAAGAGACTCCAATAATCCATATTGAAA...GGGGCAGTGGCCATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CGAGCTCGCTGCTGGCAAACTCTCAAGTCCAAGTGTGCGGCTCCCTCCGGAAAGATACTAAAACCTCTGTaGCGTCCTAAGTCGAGTAGC +
Preference number: 5 (lower is better)
Translates to: RARCWQTLKSKCAAPSGKILKPL*RPKSSS
Trigger: GCTACTCGACTTAGGACGCAACAGAGGTTTTAGTAT...CTTTCCGGAGGGAGCCGCACACTTGGACTTGAGAGTTTGCCAGCAGCGAGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTAACTGCTACAAGTGCTaGGAGGAGGGAAGGAAATAC +
Preference number: 5 (lower is better)
Translates to: LFRRADLGGFWRDASELANCYKC*EEGRKY
Trigger: GTATTTCCTTCCCTCCTCCAAGCACTTGTAGCAGTT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGGCAGCTCCGCAGACAGGACTGTATCATaGTTGAAATGTCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: PGDVTRRPCTFKTTGSSADRTVS*LKCLSQ
Trigger: CTGAGACAGACATTTCAACAATGATACAGTCCTGTC...TGCGGAGCTGCCAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCGCTTTCCTCACAACCTaGAAGACCATCAGTCATCAT +
Preference number: 5 (lower is better)
Translates to: LQTRRPWWLLERCIRARCAFLTT*KTISHH
Trigger: ATGATGACTGATGGTCTTCAAGGTTGTGAGGAAAGC...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGACTGCCCACCAGTCCTaGGGTCTGGTACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMTAHQS*GLVHPC
Trigger: GCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGT...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp TGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGGTTCTTGGGGAGCCCGTGGGGCAATAAATCGAGTTaGATGCACTTCTACGCTAGA +
Preference number: 5 (lower is better)
Translates to: CESASDKPRGWRFLGSPWGNKSS*MHFYAR
Trigger: TCTAGCGTAGAAGTGCATCAAACTCGATTTATTGCC...CCACGGGCTCCCCAAGAACCTCCAACCCCGAGGCTTATCGCTAGCGGATTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGAACTGCTCTTCAAATaGAACGCTCACATCACAAGG +
Preference number: 5 (lower is better)
Translates to: LFRRADLGGFWRDASELAELLFK*NAHITR
Trigger: CCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTC...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CGGACGGCCTCCCTGGAGATGTCACACGCCGCCCATGCACGTTCAAGACGACTGAAAATAAAACACTGGTaGCCACAGCATTCTGAAACA +
Preference number: 5 (lower is better)
Translates to: RTASLEMSHAAHARSRRLKIKHW*PQHSET
Trigger: TGTTTCAGAATGCTGTGGCAACCAGTGTTTTATTTT...CAGTCGTCTTGAACGTGCATGGGCGGCGTGTGACATCTCCAGGGAGGCCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568020.6
CDS-3UTR CAA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACACGACCAGGGCCGGTaGCTGTGCTGTCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: SLFVHVRLTHVMRACYNAHDQGR*LCCLQH
Trigger: GTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTG...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCCTGGCATACTGCTCATaGCAGAAAAGGCAACTTTGG +
Preference number: 5 (lower is better)
Translates to: NALRETWRLCTATKSGGGLAYCS*QKRQLW
Trigger: CCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCAG...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTAGGACTGTATCATTGTaGAAATGTCTGTCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: LFRRADLGGFWRDASELARTVSL*KCLSQV
Trigger: CACCTGAGACAGACATTTCAACAATGATACAGTCCT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTGACAGGACTGTATCATaGTTGAAATGTCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFDRTVS*LKCLSQ
Trigger: CTGAGACAGACATTTCAACAATGATACAGTCCTGTC...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS TCA 90 bp GAGGAAGTGCTGAGAAACCTCCTGACATGGTCATTTTTCAACACGTaGGAAGGTAATGAGGCCAGGTACCTCAGGCCTGAGTCCAGATCC +
Preference number: 5 (lower is better)
Translates to: EEVLRNLLTWSFFNT*EGNEARYLRPESRS
Trigger: GGATCTGGACTCAGGCCTGAGGTACCTGGCCTCATTACCTTCTCACGTGTTGAAAAATGACCATGTCAGGAGGTTTCTCAGCACTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 90 bp CTATCTTTTCAACACTCACTTTGCTGTGTTTTCCTAAGGGCCTCTTaGGCAGCGACTCCTCCGTGGAATGTGCTGATGTGTGCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: LSFQHSLCCVFLRAS*AATPPWNVLMCAGH
Trigger: ATGCCCTGCACACATCAGCACATTCCACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAAAACACAGCAAAGTGAGTGTTGAAAAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGGATGCATGCACGACTTaGGTCCGGGGACCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMDACTT*VRGPKE
Trigger: CTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATC...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTAAGGCAACTTTGGTGTaGGCTGTGTACAGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAKATLV*AVYRAV
Trigger: GACTGCTCTGTACACAGCCAACACCAAAGTTGCCTT...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGCGGGTGGAACTCCACTaGGAGAACTCCAAGCTCGGT +
Preference number: 5 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGRVELH*ENSKLG
Trigger: ACCGAGCTTGGAGTTCTCCAAGTGGAGTTCCACCCG...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TCCATTTTCTCTGCGCTGTGTAGCTCCTACTTACAGCTGACGATTCTCGACTTCTGTTCTCAGAGGAGTTaGGCTCCCAGAACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: SIFSALCSSYLQLTILDFCSQRS*APRTAE
Trigger: CTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACA...GAAGTCGAGAATCGTCAGCTGTAAGTAGGAGCTACACAGCGCAGAGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CATTCTTTGGAAGTCACCTGCATGCTGGAAATGGCAGCCACCCCCGCTCAGGTCGATACTCTCAAAGCTTaGACGACTATGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: HSLEVTCMLEMAATPAQVDTLKA*TTMDSL
Trigger: CAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATC...GACCTGAGCGGGGGTGGCTGCCATTTCCAGCATGCAGGTGACTTCCAAAGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp AATGCTCTTCGGGAGACATGGCGTCTCTGCACTGCAACCAAAAGTGGAGGTGGCGAACTGCTCTTCAAATaGAACGCTCACATCACAAGG +
Preference number: 5 (lower is better)
Translates to: NALRETWRLCTATKSGGGELLFK*NAHITR
Trigger: CCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTC...GCCACCTCCACTTTTGGTTGCAGTGCAGAGACGCCATGTCTCCCGAAGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTGCATGGCAGGCTCCAAGTaGAAAAGTTTCTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: LQTRRPWWLLERCIRARCMAGSK*KSFCFN
Trigger: ATTAAAACAGAAACTTTTCAACTTGGAGCCTGCCAT...GCAGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTTGGTGGCCTGATGGATaGGAGCTGGCCTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: ETLISDRLQRAKTWHMASWWPDG*ELASFC
Trigger: GCAGAATGAGGCCAGCTCCAATCCATCAGGCCACCA...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp GAACTCCACTTGGAGAACTCCAAGCTCGGTTCTCGATTCAGACCACGTGTAGCTGCAGAAAAGGCAACTTaGGTGTTGGCTGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: ELHLENSKLGSRFRPRVAAEKAT*VLAVYR
Trigger: TCTGTACACAGCCAACACCAAAGTTGCCTTTTCTGC...AGCTACACGTGGTCTGAATCGAGAACCGAGCTTGGAGTTCTCCAAGTGGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAGCAGAAAAGGCAACTTaGGTGTTGGCTGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGAEKAT*VLAVYR
Trigger: TCTGTACACAGCCAACACCAAAGTTGCCTTTTCTGC...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGCTGGGAGAGGCAGTGTaGCTGTTTGCACAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLLGEAV*LFAQKP
Trigger: TGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCAG...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp ACTGGCTGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGTGTTCTCAGAGGAGTTaGGCTCCCAGAACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: TGWEERYSQSFDDYGFSGCSQRS*APRTAE
Trigger: CTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACA...CCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGTGTTCTCAGAGGAGTTaGGCTCCCAGAACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLCSQRS*APRTAE
Trigger: CTCTGCGGTTCTGGGAGCCAAACTCCTCTGAGAACA...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp CTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGCATCCGAGCTCGCTATGGCAGGCTCCAAGTaGAAAAGTTTCTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: LFRRADLGGFWRDASELAMAGSK*KSFCFN
Trigger: ATTAAAACAGAAACTTTTCAACTTGGAGCCTGCCAT...AGCGAGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCAAGTGTGCGGCTCCCTCCGGAAAGAGGCCTCACGGATGGGTGGTTCCATTTTTGGTTTTCTAGAATATaGCGAGTGTTGAGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: PSVRLPPERGLTDGWFHFWFSRI*RVLSVD
Trigger: ATCAACACTCAACACTCGCAATATTCTAGAAAACCA...AAAATGGAACCACCCATCCGTGAGGCCTCTTTCCGGAGGGAGCCGCACACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGCCACTGCCCCCTTCCTaGGTGAACAGTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWPLPPS*VNSGAM
Trigger: CATTGCTCCACTGTTCACCAAGGAAGGGGGCAGTGG...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GCAGCACGTCCATCATGGCGCTGCCAAAGCTCTTGTCCACTTTCATaGTGCTTCTTGGTCCAGATCCTTTATTCCTTTCTTCTAGAGACA +
Preference number: 5 (lower is better)
Translates to: AARPSWRCQSSCPLS*CFLVQILYSFLLET
Trigger: TGTCTCTAGAAGAAAGGAATAAAGGATCTGGACCAAGAAGCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAAGGGATTGCCAGGACTaGGACTCTGAAGCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: SLFVHVRLTHVMRACYNARDCQD*DSEAAV
Trigger: CACAGCAGCTTCAGAGTCCAAGTCCTGGCAATCCCT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGACTAACTGTGCTGACTTaGGGCAATAAAGGACCTAGA +
Preference number: 5 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGLTVLT*GNKGPR
Trigger: TCTAGGTCCTTTATTGCCCAAAGTCAGCACAGTTAG...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCCACTGCCCCCTTCCTaGGTGAACAGTGGAGCAATG +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLPLPPS*VNSGAM
Trigger: CATTGCTCCACTGTTCACCAAGGAAGGGGGCAGTGG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGTTCTTGGAGTGATCTaGTGGCAGGCTGGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLVLGVI*WQAGQV
Trigger: CACTTGCCCAGCCTGCCACAAGATCACTCCAAGAAC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCGATGCATGCACGACTTaGGTCCGGGGACCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTDACTT*VRGPKE
Trigger: CTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATC...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGACACGACCAGGGCCGGTaGCTGTGCTGTCTTCAGCAC +
Preference number: 5 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRHDQGR*LCCLQH
Trigger: GTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTG...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATCCGGGGGTTTATTATaGCAGGGGGCACACTTATTT +
Preference number: 5 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKSGGLL*QGAHLF
Trigger: AAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGA...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGAAGGCAACTTTGGTGTaGGCTGTGTACAGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLKATLV*AVYRAV
Trigger: GACTGCTCTGTACACAGCCAACACCAAAGTTGCCTT...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp TTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCACGTGAGCTGGCATACTGCTCATaGCAGAAAAGGCAACTTTGG +
Preference number: 5 (lower is better)
Translates to: FVHVRLTHVMRACYNARELAYCS*QKRQLW
Trigger: CCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCAG...CTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCAAGGCAGTGTTGCTGTTaGCACAGAAGCCACCCTGCA +
Preference number: 5 (lower is better)
Translates to: SMKLGTALQIERSHHKASRQCCC*HRSHPA
Trigger: TGCAGGGTGGCTTCTGTGCAAACAGCAACACTGCCT...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCTGGGAGAGGCAGTGTaGCTGTTTGCACAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLLGEAV*LFAQKP
Trigger: TGGCTTCTGTGCAAACAGCAACACTGCCTCTCCCAG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GTTGAAATGTCTGTCTCAGGTGTGAATCCGCTAGCGATAAGCCTCGGGGTTGGAAGGACTGTATCATTGTaGAAATGTCTGTCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: VEMSVSGVNPLAISLGVGRTVSL*KCLSQV
Trigger: CACCTGAGACAGACATTTCAACAATGATACAGTCCT...TCCAACCCCGAGGCTTATCGCTAGCGGATTCACACCTGAGACAGACATTTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGCGACCTTGGTGGCTTTaGGAGAGATGCATCCGAGCT +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLRPWWL*ERCIRA
Trigger: AGCTCGGATGCATCTCTCCAAAAGCCACCAAGGTCG...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ATGACCGCAAAACGCTCTTCAGACGCGCCGACCTTGGTGGCTTTTGGAGAGATGTGGTTTTCTAGAATATaGCGAGTGTTGAGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: MTAKRSSDAPTLVAFGEMWFSRI*RVLSVD
Trigger: ATCAACACTCAACACTCGCAATATTCTAGAAAACCA...CATCTCTCCAAAAGCCACCAAGGTCGGCGCGTCTGAAGAGCGTTTTGCGGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp GCACGTCCATCATGGCGCTGCCAAAGCTCTTGTCCACTTTCATGCTaGTTCTTGGTCCAGATCCTTTATTCCTTTCTTCTAGAGACAAAA +
Preference number: 5 (lower is better)
Translates to: ARPSWRCQSSCPLSC*FLVQILYSFLLETK
Trigger: TTTTGTCTCTAGAAGAAAGGAATAAAGGATCTGGACCAAGAAGCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGTCCGGGGGTTTATTATaGCAGGGGGCACACTTATTT +
Preference number: 5 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMSGGLL*QGAHLF
Trigger: AAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGA...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS GCA 90 bp TACAGAGCAGTCCGGGGGTTTATTATTGCAGGGGGCACACTTATTTaGACATTATTAGGACAGGAAGTTTGCCCAGAAATGGCAGAATCA +
Preference number: 5 (lower is better)
Translates to: YRAVRGFIIAGGTLI*TLLGQEVCPEMAES
Trigger: TGATTCTGCCATTTCTGGGCAAACTTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGACTGCTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 90 bp AACTTTGGTGTTGGCTGTGTACAGAGCAGTCCGGGGGTTTATTATTaGAGGGGGCACACTTATTTGCACATTATTAGGACAGGAAGTTTG +
Preference number: 5 (lower is better)
Translates to: NFGVGCVQSSPGVYY*RGHTYLHIIRTGSL
Trigger: CAAACTTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGACTGCTCTGTACACAGCCAACACCAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CCACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAAGGCAATAAATCGAGTTaGATGCACTTCTACGCTAGA +
Preference number: 5 (lower is better)
Translates to: PHLPGCHSILKQTTLSGKGNKSS*MHFYAR
Trigger: TCTAGCGTAGAAGTGCATCAAACTCGATTTATTGCC...TTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp CACTACTGTGCCCCAAGACAGAGTCTGTGGTATAAACTAACTGTGCTGACTTTGCTAACTGTGCTGACTTaGGGCAATAAAGGACCTAGA +
Preference number: 5 (lower is better)
Translates to: HYCAPRQSLWYKLTVLTLLTVLT*GNKGPR
Trigger: TCTAGGTCCTTTATTGCCCAAAGTCAGCACAGTTAG...CAAAGTCAGCACAGTTAGTTTATACCACAGACTCTGTCTTGGGGCACAGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp ACACCTACCTGGTTGCCACAGCATTCTGAAACAGACCACACTTTCAGGAAAATGGCTTTCCTCACAACCTaGAAGACCATCAGTCATCAT +
Preference number: 5 (lower is better)
Translates to: TPTWLPQHSETDHTFRKMAFLTT*KTISHH
Trigger: ATGATGACTGATGGTCTTCAAGGTTGTGAGGAAAGC...CATTTTCCTGAAAGTGTGGTCTGTTTCAGAATGCTGTGGCAACCAGGTAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAAGGGATTGCCAGGACTaGGACTCTGAAGCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRRDCQD*DSEAAV
Trigger: CACAGCAGCTTCAGAGTCCAAGTCCTGGCAATCCCT...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TCTCTTTTTGTGCACGTAAGACTCACACATGTGATGAGGGCTTGTTACAACGCAAGGGGGCACACTTATTaGCACATTATTAGGACAGGA +
Preference number: 5 (lower is better)
Translates to: SLFVHVRLTHVMRACYNARGHTY*HIIRTG
Trigger: TCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCCT...TGCGTTGTAACAAGCCCTCATCACATGTGTGAGTCTTACGTGCACAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGTCCGGGGGTTTATTATaGCAGGGGGCACACTTATTT +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLSGGLL*QGAHLF
Trigger: AAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGA...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TATCAAAATAGTTACGTGGGTAACAACAGACGCTTTCATTCCCCTATACTGACCCTGGCATACTGCTCATaGCAGAAAAGGCAACTTTGG +
Preference number: 5 (lower is better)
Translates to: YQNSYVGNNRRFHSPILTLAYCS*QKRQLW
Trigger: CCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCAG...GGTCAGTATAGGGGAATGAAAGCGTCTGTTGTTACCCACGTAACTATTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp ACCATGAGGAGAAGAGGTCTGTTAATTCTGCATTGCATAGAAATAAAATTCAACAAAGTACCTGGCCGGTaGAAGTCCATGGACGGCTGT +
Preference number: 5 (lower is better)
Translates to: TMRRRGLLILHCIEIKFNKVPGR*KSMDGC
Trigger: ACAGCCGTCCATGGACTTCAACCGGCCAGGTACTTT...GTTGAATTTTATTTCTATGCAATGCAGAATTAACAGACCTCTTCTCCTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGATACTAAAACCTCTGTaGCGTCCTAAGTCGAGTAGC +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLILKPL*RPKSSS
Trigger: GCTACTCGACTTAGGACGCAACAGAGGTTTTAGTAT...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GAAACTTTAATATCTGACAGACTACAAAGGGCAAAGACGTGGCACATGGCCAGTGATACTCTCAAAGCTTaGACGACTATGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: ETLISDRLQRAKTWHMASDTLKA*TTMDSL
Trigger: CAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATC...ACTGGCCATGTGCCACGTCTTTGCCCTTTGTAGTCTGTCAGATATTAAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268616.9
ENST00000671377.2
CDS-3UTR CAA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGGACAGGACTGTATCATaGTTGAAATGTCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWDRTVS*LKCLSQ
Trigger: CTGAGACAGACATTTCAACAATGATACAGTCCTGTC...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGCTTTCCTCACAACCTaGAAGACCATCAGTCATCAT +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLAFLTT*KTISHH
Trigger: ATGATGACTGATGGTCTTCAAGGTTGTGAGGAAAGC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAAAGGCAACTTTGGTGTaGGCTGTGTACAGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRKATLV*AVYRAV
Trigger: GACTGCTCTGTACACAGCCAACACCAAAGTTGCCTT...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp GCTTTGACGACTATGGATTCTCTGGGACTTGGACCCTTAGAAATTAAGTTGTTGGATACTCTCAAAGCTTaGACGACTATGGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: ALTTMDSLGLGPLEIKLLDTLKA*TTMDSL
Trigger: CAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATC...CAACAACTTAATTTCTAAGGGTCCAAGTCCCAGAGAATCCATAGTCGTCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TGGGAAGAAAGATACTCTCAAAGCTTTGACGACTATGGATTCTCTGGGACTTGGTGGTTTTCTAGAATATaGCGAGTGTTGAGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: WEERYSQSFDDYGFSGTWWFSRI*RVLSVD
Trigger: ATCAACACTCAACACTCGCAATATTCTAGAAAACCA...CCAAGTCCCAGAGAATCCATAGTCGTCAAAGCTTTGAGAGTATCTTTCTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTGCAGAAAAGGCAACTTaGGTGTTGGCTGTGTACAGA +
Preference number: 5 (lower is better)
Translates to: HSSVVQSLKIPEISANHFAEKAT*VLAVYR
Trigger: TCTGTACACAGCCAACACCAAAGTTGCCTTTTCTGC...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp TCTATGAAGTTAGGAACTGCTCTTCAAATTGAACGCTCACATCACAAGGCCTCATTTCAATATGGATTATaGGAGTCTCTTGCACTGACT +
Preference number: 5 (lower is better)
Translates to: SMKLGTALQIERSHHKASFQYGL*ESLALT
Trigger: AGTCAGTGCAAGAGACTCCAATAATCCATATTGAAA...TGAGGCCTTGTGATGTGAGCGTTCAATTTGAAGAGCAGTTCCTAACTTCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp CATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAGATTAGTGCTAATCACTTTAGGACTGTATCATTGTaGAAATGTCTGTCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: HSSVVQSLKIPEISANHFRTVSL*KCLSQV
Trigger: CACCTGAGACAGACATTTCAACAATGATACAGTCCT...AAAGTGATTAGCACTAATCTCTGGGATTTTTAAGGATTGCACTACAGAAGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS-3UTR CAA 90 bp AGAGATTTACATCAGGGTACATTCTTCTGTAGTGCAATCCTTAAAAATCCCAGAATGGCAGGCTCCAAGTaGAAAAGTTTCTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: RDLHQGTFFCSAILKNPRMAGSK*KSFCFN
Trigger: ATTAAAACAGAAACTTTTCAACTTGGAGCCTGCCAT...TCTGGGATTTTTAAGGATTGCACTACAGAAGAATGTACCCTGATGTAAATCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp GCCAGGGCTGAGCCCGCGCTGCCCGCATGGGAGCAGTaGGGCAAGGGGGCGGCGGAGCCGGCCGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: ARAEPALPAWEQ*GKGAAEPAGCC
Trigger: GCAGCACCCGGCCGGCTCCGCCGCCCCCTTGCCTCACTGCTCCCATGCGGGCAGCGCGGGCTCAGCCCTGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000565193.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp AAGGGGGCGGCGGAGCCGGCCGGGTGCTGCCCGTGGTaGTGGGCTCCGCTCTGCGAGGACGGGATACCAGCC +
Preference number: 6 (lower is better)
Translates to: KGAAEPAGCCPW*WAPLCEDGIPA
Trigger: GGCTGGTATCCCGTCCTCGCAGAGCGGAGCCCAGCACCACGGGCAGCACCCGGCCGGCTCCGCCGCCCCCTT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000565193.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GGGGCGGCGGAGCCGGCCGGGTGCTGCCCGTGGTGCTaGGCTCCGCTCTGCGAGGACGGGATACCAGCCACT +
Preference number: 6 (lower is better)
Translates to: GAAEPAGCCPWC*APLCEDGIPAT
Trigger: AGTGGCTGGTATCCCGTCCTCGCAGAGCGGAGCCCAGCACCACGGGCAGCACCCGGCCGGCTCCGCCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000565193.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GACGGGCGGCGTGGAGGACTGTGCTGGGCGTCCCCGTaGCGGCCGTGCTGGTCTCCACGACCAGGGCCGGTT +
Preference number: 6 (lower is better)
Translates to: DGRRGGLCWASP*RPCWSPRPGPV
Trigger: AACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACGCCGCCCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp CGTGGAGGACTGTGCTGGGCGTCCCCGTGGCGGCCGTaGTGGTCTCCACGACCAGGGCCGGTTGCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: RGGLCWASPWRP*WSPRPGPVAVL
Trigger: CAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCACAGTCCTCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp CACTCGAGCCGCAGCTGCCGCTGCAGCCACAGGACGTaGACACAATGCAGCCTGGCGGGGGTGGGGCGGGCT +
Preference number: 6 (lower is better)
Translates to: HSSRSCRCSHRT*TQCSLAGVGRA
Trigger: AGCCCGCCCCACCCCCGCCAGGCTGCATTGTGTGCACGTCCTGTGGCTGCAGCGGCAGCTGCGGCTCGAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GGAGGACTGTGCTGGGCGTCCCCGTGGCGGCCGTGCTaGTCTCCACGACCAGGGCCGGTTGCTGTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: GGLCWASPWRPC*SPRPGPVAVLS
Trigger: AGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCCCAGCACAGTCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 90 bp GGGCGTCCCCGTGGCGGCCGTGCTGGTCTCCACGACCAGGGCCGGTaGCTGTGCTGTCTTCAGCACCCTGTCCAGCGTGGATGCATGCAC +
Preference number: 6 (lower is better)
Translates to: GRPRGGRAGLHDQGR*LCCLQHPVQRGCMH
Trigger: GTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACGGGGACGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp GTGGGCGCGGCCATGGCGCGCGCTTACCTGGCCGGTTaGAGTCCATGGACGGCTGTTTGCAGTCCTGGGCGC +
Preference number: 6 (lower is better)
Translates to: VGAAMARAYLAG*SPWTAVCSPGR
Trigger: GCGCCCAGGACTGCAAACAGCCGTCCATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS CCA 72 bp TGCACTGGTCCTGCGGGAGCCTGGTGGGCGCGGCCATaGCGCGCGCTTACCTGGCCGGTTGAAGTCCATGGA +
Preference number: 6 (lower is better)
Translates to: CTGPAGAWWARP*RALTWPVEVHG
Trigger: TCCATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCCCGCAGGACCAGTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS CAA 72 bp GGTGGGCGCGGCCATGGCGCGCGCTTACCTGGCCGGTaGAAGTCCATGGACGGCTGTTTGCAGTCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: GGRGHGARLPGR*KSMDGCLQSWA
Trigger: CGCCCAGGACTGCAAACAGCCGTCCATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS GCA 72 bp GACATGGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTaGACAGGCTGGTGGGGTGCGGACGCGGGCAGCACG +
Preference number: 6 (lower is better)
Translates to: DMELLSESPERT*TGWWGADAGST
Trigger: CGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp CTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCTGGTaGGGTGCGGACGCGGGCAGCACGTCCATCATGGCG +
Preference number: 6 (lower is better)
Translates to: LSESPERTCTGW*GADAGSTSIMA
Trigger: CGCCATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GGAGCCTGGTGGGCGCGGCCATGGCGCGCGCTTACCTaGCCGGTTGAAGTCCATGGACGGCTGTTTGCAGTC +
Preference number: 6 (lower is better)
Translates to: GAWWARPWRALT*PVEVHGRLFAV
Trigger: GACTGCAAACAGCCGTCCATGGACTTCAACCGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS CCA 72 bp AACCAAGCATTTGTGTGCACTGGTCCTGCGGGAGCCTaGTGGGCGCGGCCATGGCGCGCGCTTACCTGGCCG +
Preference number: 6 (lower is better)
Translates to: NQAFVCTGPAGA*WARPWRALTWP
Trigger: CGGCCAGGTAAGCGCGCGCCATGGCCGCGCCCACCAGGCTCCCGCAGGACCAGTGCACACAAATGCTTGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS CAA 72 bp CGTGGCGGCCGTGCTGGTCTCCACGACCAGGGCCGGTaGCTGTGCTGTCTTCAGCACCCTGTCCAGCGTGGA +
Preference number: 6 (lower is better)
Translates to: RGGRAGLHDQGR*LCCLQHPVQRG
Trigger: TCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GTGGCGGCCGTGCTGGTCTCCACGACCAGGGCCGGTTaGTGTGCTGTCTTCAGCACCCTGTCCAGCGTGGAT +
Preference number: 6 (lower is better)
Translates to: VAAVLVSTTRAG*CAVFSTLSSVD
Trigger: ATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCCGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp CTGCTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCTaGTGGGGTGCGGACGCGGGCAGCACGTCCATCATG +
Preference number: 6 (lower is better)
Translates to: LLSESPERTCTG*WGADAGSTSIM
Trigger: CATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp CACGGCAAACGTGGACTGCCCACTCAGGACAGGGTCTaGGGTCCCGCTGCTGCTGTAAGGGGCGTGCACGAC +
Preference number: 6 (lower is better)
Translates to: HGKRGLPTQDRV*GPAAAVRGVHD
Trigger: GTCGTGCACGCCCCTTACAGCAGCAGCGGGACCCCAGACCCTGTCCTGAGTGGGCAGTCCACGTTTGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp GACCGGAGAACGGGTGCTGGAAGTAGTTGGCGTAGCTaGCAGTCAGGCCACTCGAGCCGCAGCTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: DRRTGAGSSWRS*QSGHSSRSCRC
Trigger: GCAGCGGCAGCTGCGGCTCGAGTGGCCTGACTGTCAGCTACGCCAACTACTTCCAGCACCCGTTCTCCGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GGCCGTGCTGGTCTCCACGACCAGGGCCGGTTGCTGTaGTGTCTTCAGCACCCTGTCCAGCGTGGATGCATG +
Preference number: 6 (lower is better)
Translates to: GRAGLHDQGRLL*CLQHPVQRGCM
Trigger: CATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGGCCCTGGTCGTGGAGACCAGCACGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp CTGTGGAGCCGCCACCGCCACTGCTGCTATAGAAACTaGTTTCAGGGACGGAGGACAGCGCCGGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LWSRHRHCCYRN*FQGRRTAPGWS
Trigger: GCTCCAGCCCGGCGCTGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp GTGCACGGAATTCAGCATGCGGATGGGTGTGATGTGTaGGGCTGCGCTCAGCATCTGCGGGGGCAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: VHGIQHADGCDV*GCAQHLRGQGV
Trigger: CACCCCCTGCCCCCGCAGATGCTGAGCGCAGCCTCACACATCACACCCATCCGCATGCTGAATTCCGTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GCTGGTGGGGTGCGGACGCGGGCAGCACGTCCATCATaGCGCTGCCAAAGCTCTTGTCCACTTTCATGCTGC +
Preference number: 6 (lower is better)
Translates to: AGGVRTRAARPS*RCQSSCPLSCC
Trigger: GCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTGCCCGCGTCCGCACCCCACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp CCGGCTTGTGCACGGAATTCAGCATGCGGATGGGTGTaGTGTGTGAGGCTGCGCTCAGCATCTGCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: PACARNSACGWV*CVRLRSASAGA
Trigger: TGCCCCCGCAGATGCTGAGCGCAGCCTCACACATCACACCCATCCGCATGCTGAATTCCGTGCACAAGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp CACCCCTGCTGTCCCTGCCATGAAGTTCTGCATGGGTaGCACGGCAAACGTGGACTGCCCACTCAGGACAGG +
Preference number: 6 (lower is better)
Translates to: HPCCPCHEVLHG*HGKRGLPTQDR
Trigger: CCTGTCCTGAGTGGGCAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GGGGTGCGGACGCGGGCAGCACGTCCATCATGGCGCTaGCAAAGCTCTTGTCCACTTTCATGCTGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: GVRTRAARPSWR*QSSCPLSCCFL
Trigger: CAAGAAGCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGGACGTGCTGCCCGCGTCCGCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp TCCGGGGACCAAAGGAGACTGTGGGTGACATGGAGCTaGTCTCCGAAAGCCCAGAGAGGACCTGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: SGDQRRLWVTWS*SPKAQRGPAQA
Trigger: AGCCTGTGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GTCTGGTACACCCCTGCTGTCCCTGCCATGAAGTTCTaGATGGGTGGCACGGCAAACGTGGACTGCCCACTC +
Preference number: 6 (lower is better)
Translates to: VWYTPAVPAMKF*MGGTANVDCPL
Trigger: GAGTGGGCAGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GCTACTGCCCACCAGTCCTTGGGTCTGGTACACCCCTaGTGTCCCTGCCATGAAGTTCTGCATGGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: ATAHQSLGLVHP*CPCHEVLHGWH
Trigger: GTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GCCCTGTTGTCACAGGCCACCCTGAACTGCCAACACTaGTGTGCTATGACTGCCCTCCCTCCCCAACCACCT +
Preference number: 6 (lower is better)
Translates to: ALLSQATLNCQH*CAMTALPPQPP
Trigger: AGGTGGTTGGGGAGGGAGGGCAGTCATAGCACAGCAGTGTTGGCAGTTCAGGGTGGCCTGTGACAACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565193.1
CDS CCA 72 bp CCGGTTGCTGTGCTGTCTTCAGCACCCTGTCCAGCGTaGATGCATGCACGACTTTGGTCCGGGGACCAAAGG +
Preference number: 6 (lower is better)
Translates to: PVAVLSSAPCPA*MHARLWSGDQR
Trigger: CCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GGCAACGTGGCCATGTTGGCAAAGGACGTGGAGGGGTaGCTGCTGGGAGAGGCAGTGTTGCTGTTTGCACAG +
Preference number: 6 (lower is better)
Translates to: GNVAMLAKDVEG*LLGEAVLLFAQ
Trigger: CTGTGCAAACAGCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGTCCTTTGCCAACATGGCCACGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp TGGACGGCTGTTTGCAGTCCTGGGCGCGGTGACCAGTaGCCCCGCAGTTGTAACAAGATAGGTTCCCGCTCT +
Preference number: 6 (lower is better)
Translates to: WTAVCSPGRGDQ*PRSCNKIGSRS
Trigger: AGAGCGGGAACCTATCTTGTTACAACTGCGGGGCCACTGGTCACCGCGCCCAGGACTGCAAACAGCCGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp GTCCTTGGGTCTGGTACACCCCTGCTGTCCCTGCCATaGAGTTCTGCATGGGTGGCACGGCAAACGTGGACT +
Preference number: 6 (lower is better)
Translates to: VLGSGTPLLSLP*SSAWVARQTWT
Trigger: AGTCCACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp ACGTGGCCATGTTGGCAAAGGACGTGGAGGGGTGGCTaGTGGGAGAGGCAGTGTTGCTGTTTGCACAGAAGC +
Preference number: 6 (lower is better)
Translates to: TWPCWQRTWRGG*WERQCCCLHRS
Trigger: GCTTCTGTGCAAACAGCAACACTGCCTCTCCCAGCAGCCACCCCTCCACGTCCTTTGCCAACATGGCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp CACCAGTCCTTGGGTCTGGTACACCCCTGCTGTCCCTaGCATGAAGTTCTGCATGGGTGGCACGGCAAACGT +
Preference number: 6 (lower is better)
Translates to: HQSLGLVHPCCP*HEVLHGWHGKR
Trigger: ACGTTTGCCGTGCCACCCATGCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp CTTTGGTCCGGGGACCAAAGGAGACTGTGGGTGACATaGAGCTGCTCTCCGAAAGCCCAGAGAGGACCTGCA +
Preference number: 6 (lower is better)
Translates to: LWSGDQRRLWVT*SCSPKAQRGPA
Trigger: TGCAGGTCCTCTCTGGGCTTTCGGAGAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp TCAGCACCCTGTCCAGCGTGGATGCATGCACGACTTTaGTCCGGGGACCAAAGGAGACTGTGGGTGACATGG +
Preference number: 6 (lower is better)
Translates to: SAPCPAWMHARL*SGDQRRLWVTW
Trigger: CCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 90 bp TGTGCTGTCTTCAGCACCCTGTCCAGCGTGGATGCATGCACGACTTaGGTCCGGGGACCAAAGGAGACTGTGGGTGACATGGAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: CAVFSTLSSVDACTT*VRGPKETVGDMELL
Trigger: GAGCAGCTCCATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp ACCTGGGCCGTGGGTCTGGCGGAACTGGAAGTGAAGTaGTTCAGCAGCATCACCGGCTTCTCCTTGTCAGAG +
Preference number: 6 (lower is better)
Translates to: TWAVGLAELEVK*FSSITGFSLSE
Trigger: CTCTGACAAGGAGAAGCCGGTGATGCTGCTGAATCACTTCACTTCCAGTTCCGCCAGACCCACGGCCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp GGAGAACCTGGGCCGTGGGTCTGGCGGAACTGGAAGTaGAGTGATTCAGCAGCATCACCGGCTTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: GEPGPWVWRNWK*SDSAASPASPC
Trigger: ACAAGGAGAAGCCGGTGATGCTGCTGAATCACTTCACTTCCAGTTCCGCCAGACCCACGGCCCAGGTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp TGTGCTGTCTTCAGCACCCTGTCCAGCGTGGATGCATaGACGACTTTGGTCCGGGGACCAAAGGAGACTGTG +
Preference number: 6 (lower is better)
Translates to: CAVFSTLSSVDA*TTLVRGPKETV
Trigger: CACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp TTGCTGTGCTGTCTTCAGCACCCTGTCCAGCGTGGATaGATGCACGACTTTGGTCCGGGGACCAAAGGAGAC +
Preference number: 6 (lower is better)
Translates to: LLCCLQHPVQRG*MHDFGPGTKGD
Trigger: GTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAAGACAGCACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GGAGAGGCAGTGTTGCTGTTTGCACAGAAGCCACCCTaGAGGGGGCCCACTGGCATACTGCTCATTGCAGAA +
Preference number: 6 (lower is better)
Translates to: GEAVLLFAQKPP*RGPTGILLIAE
Trigger: TTCTGCAATGAGCAGTATGCCAGTGGGCCCCCTGCAGGGTGGCTTCTGTGCAAACAGCAACACTGCCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp CAGGAATGTTTCCTGTGGAGCCGCCACCGCCACTGCTaGTATAGAAACTGCTTTCAGGGACGGAGGACAGCG +
Preference number: 6 (lower is better)
Translates to: QECFLWSRHRHC*YRNCFQGRRTA
Trigger: CGCTGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GGTGGTGGTTCGGATTCGAGGCAGGAATGTTTCCTGTaGAGCCGCCACCGCCACTGCTGCTATAGAAACTGC +
Preference number: 6 (lower is better)
Translates to: GGGSDSRQECFL*SRHRHCCYRNC
Trigger: GCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTGCCTCGAATCCGAACCACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp CTGGAACCATTGCTACTGCCCACCAGTCCTTGGGTCTaGTACACCCCTGCTGTCCCTGCCATGAAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: LEPLLLPTSPWV*YTPAVPAMKFC
Trigger: GCAGAACTTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp GAGAGGAGCTTCATGTCCGCGCTCCCTCTTTCCGGCTaGTGCACGGAATTCAGCATGCGGATGGGTGTGATG +
Preference number: 6 (lower is better)
Translates to: ERSFMSALPLSG*CTEFSMRMGVM
Trigger: CATCACACCCATCCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGGGAGCGCGGACATGAAGCTCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp TTCAGCACCCTGTCCAGCGTGGATGCATGCACGACTTaGGTCCGGGGACCAAAGGAGACTGTGGGTGACATG +
Preference number: 6 (lower is better)
Translates to: FSTLSSVDACTT*VRGPKETVGDM
Trigger: CATGTCACCCACAGTCTCCTTTGGTCCCCGGACCAAAGTCGTGCATGCATCCACGCTGGACAGGGTGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 90 bp ACAGAAGACGAGAGGAGCTTCATGTCCGCGCTCCCTCTTTCCGGCTaGTGCACGGAATTCAGCATGCGGATGGGTGTGATGTGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: TEDERSFMSALPLSG*CTEFSMRMGVMCEA
Trigger: AGCCTCACACATCACACCCATCCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGGGAGCGCGGACATGAAGCTCCTCTCGTCTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp AGGAGCTTCATGTCCGCGCTCCCTCTTTCCGGCTTGTaGACGGAATTCAGCATGCGGATGGGTGTGATGTGT +
Preference number: 6 (lower is better)
Translates to: RSFMSALPLSGL*TEFSMRMGVMC
Trigger: ACACATCACACCCATCCGCATGCTGAATTCCGTGCACAAGCCGGAAAGAGGGAGCGCGGACATGAAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GCCACCCTGCAGGGGGCCCACTGGCATACTGCTCATTaGAGAAAAGGCAACTTTGGTGTTGGCTGTGTACAG +
Preference number: 6 (lower is better)
Translates to: ATLQGAHWHTAH*RKGNFGVGCVQ
Trigger: CTGTACACAGCCAACACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCAGTGGGCCCCCTGCAGGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp AGGCAGGAATGTTTCCTGTGGAGCCGCCACCGCCACTaGTGCTATAGAAACTGCTTTCAGGGACGGAGGACA +
Preference number: 6 (lower is better)
Translates to: RQECFLWSRHRH*CYRNCFQGRRT
Trigger: TGTCCTCCGTCCCTGAAAGCAGTTTCTATAGCAGCAGTGGCGGTGGCGGCTCCACAGGAAACATTCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GGTTCCCGCTCTTTTTGTGACTGGAACCATTGCTACTaGCCACCAGTCCTTGGGTCTGGTACACCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: GSRSFCDWNHCY*PPVLGSGTPLL
Trigger: CAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCCAGTCACAAAAAGAGCGGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS TCA 72 bp GGGCCTCTTGGGCAGCGACTCCTCCGTGGAATGTGCTaGTGTGTGCAGGGCATTCTCCAAACTATTACTGAC +
Preference number: 6 (lower is better)
Translates to: GPLGQRLLRGMC*CVQGILQTITD
Trigger: GTCAGTAATAGTTTGGAGAATGCCCTGCACACATCAGCACATTCCACGGAGGAGTCGCTGCCCAAGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp TTTGTGACTGGAACCATTGCTACTGCCCACCAGTCCTaGGGTCTGGTACACCCCTGCTGTCCCTGCCATGAA +
Preference number: 6 (lower is better)
Translates to: FVTGTIATAHQS*GLVHPCCPCHE
Trigger: TTCATGGCAGGGACAGCAGGGGTGTACCAGACCCAAGGACTGGTGGGCAGTAGCAATGGTTCCAGTCACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp TCAACACTCACTTTGCTGTGTTTTCCTAAGGGCCTCTaGGGCAGCGACTCCTCCGTGGAATGTGCTGATGTG +
Preference number: 6 (lower is better)
Translates to: STLTLLCFPKGL*GSDSSVECADV
Trigger: CACATCAGCACATTCCACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAAAACACAGCAAAGTGAGTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp CCCACTGGCATACTGCTCATTGCAGAAAAGGCAACTTaGGTGTTGGCTGTGTACAGAGCAGTCCGGGGGTTT +
Preference number: 6 (lower is better)
Translates to: PTGILLIAEKAT*VLAVYRAVRGF
Trigger: AAACCCCCGGACTGCTCTGTACACAGCCAACACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 90 bp TCTATCTTTTCAACACTCACTTTGCTGTGTTTTCCTAAGGGCCTCTaGGGCAGCGACTCCTCCGTGGAATGTGCTGATGTGTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SIFSTLTLLCFPKGL*GSDSSVECADVCRA
Trigger: TGCCCTGCACACATCAGCACATTCCACGGAGGAGTCGCTGCCCAAGAGGCCCTTAGGAAAACACAGCAAAGTGAGTGTTGAAAAGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp CCACTGGCATACTGCTCATTGCAGAAAAGGCAACTTTaGTGTTGGCTGTGTACAGAGCAGTCCGGGGGTTTA +
Preference number: 6 (lower is better)
Translates to: PLAYCSLQKRQL*CWLCTEQSGGL
Trigger: TAAACCCCCGGACTGCTCTGTACACAGCCAACACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 90 bp TTGCTTTACAAAGAAAGAAGTTTACTCTTCATAAAAACCAAGCATTaGTGTGCACTGGTCCTGCGGGAGCCTGGTGGGCGCGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: LLYKERSLLFIKTKH*CALVLREPGGRGHG
Trigger: GCCATGGCCGCGCCCACCAGGCTCCCGCAGGACCAGTGCACACAAATGCTTGGTTTTTATGAAGAGTAAACTTCTTTCTTTGTAAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS TCA 72 bp CTGAGAAACCTCCTGACATGGTCATTTTTCAACACGTaGGAAGGTAATGAGGCCAGGTACCTCAGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LRNLLTWSFFNT*EGNEARYLRPE
Trigger: CTCAGGCCTGAGGTACCTGGCCTCATTACCTTCTCACGTGTTGAAAAATGACCATGTCAGGAGGTTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp AAAGAAAGAAGTTTACTCTTCATAAAAACCAAGCATTaGTGTGCACTGGTCCTGCGGGAGCCTGGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: KERSLLFIKTKH*CALVLREPGGR
Trigger: GCGCCCACCAGGCTCCCGCAGGACCAGTGCACACAAATGCTTGGTTTTTATGAAGAGTAAACTTCTTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561928.1
CDS CAA 90 bp GTACAGAGCAGTCCGGGGGTTTATTATTGCAGGGGGCACACTTATTaGCACATTATTAGGACAGGAAGTTTGCCCAGAAATGGCAGAATC +
Preference number: 6 (lower is better)
Translates to: VQSSPGVYYCRGHTY*HIIRTGSLPRNGRI
Trigger: GATTCTGCCATTTCTGGGCAAACTTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGACTGCTCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp CCATCATGGCGCTGCCAAAGCTCTTGTCCACTTTCATaGTGCTTCTTGGTCCAGATCCTTTATTCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: PSWRCQSSCPLS*CFLVQILYSFL
Trigger: AAGAAAGGAATAAAGGATCTGGACCAAGAAGCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GTTGGCTGTGTACAGAGCAGTCCGGGGGTTTATTATTaGAGGGGGCACACTTATTTGCACATTATTAGGACA +
Preference number: 6 (lower is better)
Translates to: VGCVQSSPGVYY*RGHTYLHIIRT
Trigger: TGTCCTAATAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGACTGCTCTGTACACAGCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp GCATACTGCTCATTGCAGAAAAGGCAACTTTGGTGTTaGCTGTGTACAGAGCAGTCCGGGGGTTTATTATTG +
Preference number: 6 (lower is better)
Translates to: AYCSLQKRQLWC*LCTEQSGGLLL
Trigger: CAATAATAAACCCCCGGACTGCTCTGTACACAGCCAACACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp GGCATACTGCTCATTGCAGAAAAGGCAACTTTGGTGTaGGCTGTGTACAGAGCAGTCCGGGGGTTTATTATT +
Preference number: 6 (lower is better)
Translates to: GILLIAEKATLV*AVYRAVRGFII
Trigger: AATAATAAACCCCCGGACTGCTCTGTACACAGCCAACACCAAAGTTGCCTTTTCTGCAATGAGCAGTATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 90 bp CCATCATGGCGCTGCCAAAGCTCTTGTCCACTTTCATGCTGCTTCTaGGTCCAGATCCTTTATTCCTTTCTTCTAGAGACAAAAGTGAGT +
Preference number: 6 (lower is better)
Translates to: PSWRCQSSCPLSCCF*VQILYSFLLETKVS
Trigger: ACTCACTTTTGTCTCTAGAAGAAAGGAATAAAGGATCTGGACCAAGAAGCAGCATGAAAGTGGACAAGAGCTTTGGCAGCGCCATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp GTCCGGGGGTTTATTATTGCAGGGGGCACACTTATTTaGACATTATTAGGACAGGAAGTTTGCCCAGAAATG +
Preference number: 6 (lower is better)
Translates to: VRGFIIAGGTLI*TLLGQEVCPEM
Trigger: CATTTCTGGGCAAACTTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp AGTCCGGGGGTTTATTATTGCAGGGGGCACACTTATTaGCACATTATTAGGACAGGAAGTTTGCCCAGAAAT +
Preference number: 6 (lower is better)
Translates to: SPGVYYCRGHTY*HIIRTGSLPRN
Trigger: ATTTCTGGGCAAACTTCCTGTCCTAATAATGTGCAAATAAGTGTGCCCCCTGCAATAATAAACCCCCGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000268616.9
ENST00000561928.1
ENST00000568020.6
ENST00000671377.2
CDS CCA 72 bp AATAACGTTCTGTTGCCAGAGAAAAATATCAATCTGTaGAGTCCAGACTTTCTGCTGGAGGGGCGTATTTCA +
Preference number: 6 (lower is better)
Translates to: NNVLLPEKNINL*SPDFLLEGRIS
Trigger: TGAAATACGCCCCTCCAGCAGAAAGTCTGGACTCCACAGATTGATATTTTTCTCTGGCAACAGAACGTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS GCA 72 bp TTTTCCTTATGTCTCCATGGCTTAATAACGTTCTGTTaGCAGAGAAAAATATCAATCTGTGGAGTCCAGACT +
Preference number: 6 (lower is better)
Translates to: FSLCLHGLITFC*QRKISICGVQT
Trigger: AGTCTGGACTCCACAGATTGATATTTTTCTCTGGCAACAGAACGTTATTAAGCCATGGAGACATAAGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS CAA 72 bp ATTTTCCTTATGTCTCCATGGCTTAATAACGTTCTGTaGCCAGAGAAAAATATCAATCTGTGGAGTCCAGAC +
Preference number: 6 (lower is better)
Translates to: IFLMSPWLNNVL*PEKNINLWSPD
Trigger: GTCTGGACTCCACAGATTGATATTTTTCTCTGGCAACAGAACGTTATTAAGCCATGGAGACATAAGGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2
CDS CAA 90 bp TTGTATTTAATTTTCCTTATGTCTCCATGGCTTAATAACGTTCTGTaGCCAGAGAAAAATATCAATCTGTGGAGTCCAGACTTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LYLIFLMSPWLNNVL*PEKNINLWSPDFLL
Trigger: CAGCAGAAAGTCTGGACTCCACAGATTGATATTTTTCTCTGGCAACAGAACGTTATTAAGCCATGGAGACATAAGGAAAATTAAATACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268616.9
ENST00000568020.6
ENST00000671377.2