Pregenerated sensors for ZCCHC13 (Homo sapiens)
Ensembl gene IDs: ENSG00000187969Ensembl transcript IDs: ENST00000339534.4
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTCGCAGCGGTAGCAGTTaGCCTGGCCTCGCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRRSGSS*PGLALL Trigger: CAGCAAGGCGAGGCCAGGTCAACTGCTACCGCTGCG...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR TCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTGATGCGATCTTCCAATaGGCAGGCCCACCTCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRDAIFQ*AGPPRP Trigger: GGGCCGAGGTGGGCCTGCTCATTGGAAGATCGCATC...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTCAATTGATGGCCACGTaGCCAATCTCGCCGCATCGG | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRQLMAT*PISPHR Trigger: CCGATGCGGCGAGATTGGCCACGTGGCCATCAATTG...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR TCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTGTGGTGGAACCACATTaGGAACCTCTGCCATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRVVEPH*EPLPWP Trigger: AGGCCATGGCAGAGGTTCTCAATGTGGTTCCACCAC...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR TCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTTCGCCTTGCTGCAATTaGTGGCCACGTGGCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRSPCCN*WPRGQS Trigger: AGATTGGCCACGTGGCCATCAATTGCAGCAAGGCGA...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR GCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTCACATTGAGAACCTCTaGCATGGCCTCCACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRHIENL*HGLHLF Trigger: GAAGAGGTGGAGGCCATGGCAGAGGTTCTCAATGTG...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR TCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTCATTTCTGCTCTTTCTaGCGATCACAGTCACGAGCC | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRHFCSF*RSQSRA Trigger: GGCTCGTGACTGTGATCGTCAGAAAGAGCAGAAATG...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCCATCCCCGAGCCCAATaGCCAGAGTGTCCACACGCG | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIHPRAQ*PECPHA Trigger: CGCGTGTGGACACTCTGGCCATTGGGCTCGGGGATG...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR GCA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTCGAAGAAATCCTTACTaGTCATGGCTGCGATGCGAT | + |
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Preference number: 4 (lower is better) Translates to: AQNDYLITRFARGAEATRRRNPY*SWLRCD Trigger: ATCGCATCGCAGCCATGAGCAGTAAGGATTTCTTCG...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR TCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCTGGGCGCAGTCTTTCTaGATGTGCCCAAGTTTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIWAQSF*MCPSLP Trigger: CGGCAAACTTGGGCACATTCAGAAAGACTGCGCCCA...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR TCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCCGCATCGGTAACACTTaGCCTGGGCGCAGTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIRIGNT*PGRSLS Trigger: AGAAAGACTGCGCCCAGGTCAAGTGTTACCGATGCG...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCCAGTCTTTGGCGATGTaGCCGCTTCTCCCACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIQSLAM*PLLPQL Trigger: CAACTGTGGGAGAAGCGGCCACATCGCCAAAGACTG...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR GCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCTGCTCATGGCTGCGATaGGATCTTCCAATGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIICSWLR*DLPMSR Trigger: CCTGCTCATTGGAAGATCGCATCGCAGCCATGAGCA...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCGATCCTTACAGTCTTTaGCGATGTGGCCGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIDPYSL*RCGRFS Trigger: GGAGAAGCGGCCACATCGCCAAAGACTGTAAGGATC...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCCACTGGGACATTCCTTaGCTAGATGTCGGGATTTGC | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIHWDIP*LDVGIC Trigger: GCAAATCCCGACATCTAGCCAAGGAATGTCCCAGTG...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR GCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCCCAGATGTCCTAGTCTaGCGCAGGTATAACAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIPDVLV*RRYNSV Trigger: AACACTGTTATACCTGCGGCAGACTAGGACATCTGG...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCAATCCTTACTGCTCATaGCTGCGATGCGATCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIINPYCS*LRCDLP Trigger: TGGAAGATCGCATCGCAGCCATGAGCAGTAAGGATT...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR TCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCCTATCGACCTTTCGGTaGGTGAAGTTTTCGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIILSTFR*VKFSEK Trigger: TTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAG...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR GCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCGAATGTGCCCAAGTTTaGCGCAAGAGTAGCATTTCT | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIECAQV*RKSSIS Trigger: AGAAATGCTACTCTTGCGGCAAACTTGGGCACATTC...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCTGTAAGATAGGGTGGTaGAACCACATTGAGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIICKIGW*NHIENL Trigger: GAGGTTCTCAATGTGGTTCCACCACCCTATCTTACA...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CCA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCAGGTGTAAGATAGGGTaGTGGAACCACATTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: QSIDLSVSEVFGENNTIIRCKIG*WNHIEN Trigger: GTTCTCAATGTGGTTCCACCACCCTATCTTACACCT...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS CCA 90 bp | CCCAATGGCCAGAGTGTCCACACGCGAAGAAATCCTTACTGCTCATaGCTGCGATGCGATCTTCCAATGAGCAGGCCCACCTCGGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: PNGQSVHTRRNPYCS*LRCDLPMSRPTSAP Trigger: CGGGGCCGAGGTGGGCCTGCTCATTGGAAGATCGCATCGCAGCCATGAGCAGTAAGGATTTCTTCGCGTGTGGACACTCTGGCCATTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS GCA 90 bp | CCCGAGCCCAATGGCCAGAGTGTCCACACGCGAAGAAATCCTTACTaGTCATGGCTGCGATGCGATCTTCCAATGAGCAGGCCCACCTCG | + |
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Preference number: 5 (lower is better) Translates to: PEPNGQSVHTRRNPY*SWLRCDLPMSRPTS Trigger: CGAGGTGGGCCTGCTCATTGGAAGATCGCATCGCAGCCATGAGCAGTAAGGATTTCTTCGCGTGTGGACACTCTGGCCATTGGGCTCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS TCA 90 bp | GACATTCCTTGGCTAGATGTCGGGATTTGCCGCAGCGGTAGCAGTTaGCCTGGCCTCGCCTTGCTGCAATTGATGGCCACGTGGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: DIPWLDVGICRSGSS*PGLALLQLMATWPI Trigger: GATTGGCCACGTGGCCATCAATTGCAGCAAGGCGAGGCCAGGTCAACTGCTACCGCTGCGGCAAATCCCGACATCTAGCCAAGGAATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS CCA 90 bp | TACGACCGGACTCACCACAGCAGTAACAGGTGTAAGATAGGGTGGTaGAACCACATTGAGAACCTCTGCCATGGCCTCCACCTCTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: YDRTHHSSNRCKIGW*NHIENLCHGLHLFA Trigger: GGCGAAGAGGTGGAGGCCATGGCAGAGGTTCTCAATGTGGTTCCACCACCCTATCTTACACCTGTTACTGCTGTGGTGAGTCCGGTCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS CCA 90 bp | CATTACGACCGGACTCACCACAGCAGTAACAGGTGTAAGATAGGGTaGTGGAACCACATTGAGAACCTCTGCCATGGCCTCCACCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: HYDRTHHSSNRCKIG*WNHIENLCHGLHLF Trigger: GAAGAGGTGGAGGCCATGGCAGAGGTTCTCAATGTGGTTCCACCACCCTATCTTACACCTGTTACTGCTGTGGTGAGTCCGGTCGTAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CAA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTGGTGGTGGAACCACATaGAGAACCTCTGCCATGGCC | + |
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Preference number: 5 (lower is better) Translates to: AQNDYLITRFARGAEATRGGGTT*RTSAMA Trigger: GGCCATGGCAGAGGTTCTCAATGTGGTTCCACCACC...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CAA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTCTCGCCTTGCTGCAATaGATGGCCACGTGGCCAATC | + |
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Preference number: 5 (lower is better) Translates to: AQNDYLITRFARGAEATRLALLQ*MATWPI Trigger: GATTGGCCACGTGGCCATCAATTGCAGCAAGGCGAG...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CAA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTGCAGGTATAACAGTGTaGGCGTCTCTCTCGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: AQNDYLITRFARGAEATRAGITV*ASLSFR Trigger: CCTAAACGAGAGAGACGCCAACACTGTTATACCTGC...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CAA 90 bp | GCTCAGAATGACTATTTAATAACTAGATTTGCCCGTGGGGCAGAAGCAACACGTTCACTGGGACATTCCTaGGCTAGATGTCGGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: AQNDYLITRFARGAEATRSLGHS*ARCRDL Trigger: CAAATCCCGACATCTAGCCAAGGAATGTCCCAGTGA...ACGTGTTGCTTCTGCCCCACGGGCAAATCTAGTTATTAAATAGTCATTCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CAA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCCGGCGCAACCCCGCTTaGGGCGGCTTAGAAAGAATT | + |
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Preference number: 5 (lower is better) Translates to: QSIDLSVSEVFGENNTIIRRNPA*GGLERI Trigger: AATTCTTTCTAAGCCGCCCAAAGCGGGGTTGCGCCG...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS-3UTR CAA 90 bp | CAATCTATCGACCTTTCGGTGAGTGAAGTTTTCGGAGAAAATAATACAATTATCGGATCCTTACAGTCTTaGGCGATGTGGCCGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QSIDLSVSEVFGENNTIIGSLQS*AMWPLL Trigger: GAGAAGCGGCCACATCGCCAAAGACTGTAAGGATCC...GATAATTGTATTATTTTCTCCGAAAACTTCACTCACCGAAAGGTCGATAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS TCA 72 bp | ATCCTTACTGCTCATGGCTGCGATGCGATCTTCCAATaGGCAGGCCCACCTCGGCCCCGGAGGCCCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: ILTAHGCDAIFQ*AGPPRPRRPRR Trigger: GCGCCGGGGCCTCCGGGGCCGAGGTGGGCCTGCTCATTGGAAGATCGCATCGCAGCCATGAGCAGTAAGGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS TCA 72 bp | GCGGTAGCAGTTGACCTGGCCTCGCCTTGCTGCAATTaGTGGCCACGTGGCCAATCTCGCCGCATCGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: AVAVDLASPCCN*WPRGQSRRIGN Trigger: GTTACCGATGCGGCGAGATTGGCCACGTGGCCATCAATTGCAGCAAGGCGAGGCCAGGTCAACTGCTACCGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS TCA 72 bp | TGGCTAGATGTCGGGATTTGCCGCAGCGGTAGCAGTTaGCCTGGCCTCGCCTTGCTGCAATTGATGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: WLDVGICRSGSS*PGLALLQLMAT Trigger: CGTGGCCATCAATTGCAGCAAGGCGAGGCCAGGTCAACTGCTACCGCTGCGGCAAATCCCGACATCTAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS CCA 72 bp | CCTCCAGCTCCTCCTCTAGGGCATCCCCGAGCCCAATaGCCAGAGTGTCCACACGCGAAGAAATCCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: PPAPPLGHPRAQ*PECPHAKKSLL Trigger: CAGTAAGGATTTCTTCGCGTGTGGACACTCTGGCCATTGGGCTCGGGGATGCCCTAGAGGAGGAGCTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS TCA 72 bp | TGGCCACGTGGCCAATCTCGCCGCATCGGTAACACTTaGCCTGGGCGCAGTCTTTCTGAATGTGCCCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: WPRGQSRRIGNT*PGRSLSECAQV Trigger: AACTTGGGCACATTCAGAAAGACTGCGCCCAGGTCAAGTGTTACCGATGCGGCGAGATTGGCCACGTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS GCA 72 bp | TGTAAGATAGGGTGGTGGAACCACATTGAGAACCTCTaGCATGGCCTCCACCTCTTCGCCCTCCAGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: CKIGWWNHIENL*HGLHLFALQLL Trigger: GAGGAGCTGGAGGGCGAAGAGGTGGAGGCCATGGCAGAGGTTCTCAATGTGGTTCCACCACCCTATCTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS CCA 72 bp | CAGAGTGTCCACACGCGAAGAAATCCTTACTGCTCATaGCTGCGATGCGATCTTCCAATGAGCAGGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: QSVHTRRNPYCS*LRCDLPMSRPT Trigger: GGTGGGCCTGCTCATTGGAAGATCGCATCGCAGCCATGAGCAGTAAGGATTTCTTCGCGTGTGGACACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS CCA 72 bp | CGGACTCACCACAGCAGTAACAGGTGTAAGATAGGGTaGTGGAACCACATTGAGAACCTCTGCCATGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RTHHSSNRCKIG*WNHIENLCHGL Trigger: GAGGCCATGGCAGAGGTTCTCAATGTGGTTCCACCACCCTATCTTACACCTGTTACTGCTGTGGTGAGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS GCA 72 bp | AATGGCCAGAGTGTCCACACGCGAAGAAATCCTTACTaGTCATGGCTGCGATGCGATCTTCCAATGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: NGQSVHTRRNPY*SWLRCDLPMSR Trigger: CCTGCTCATTGGAAGATCGCATCGCAGCCATGAGCAGTAAGGATTTCTTCGCGTGTGGACACTCTGGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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| CDS CCA 72 bp | ACTCACCACAGCAGTAACAGGTGTAAGATAGGGTGGTaGAACCACATTGAGAACCTCTGCCATGGCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: THHSSNRCKIGW*NHIENLCHGLH Trigger: GTGGAGGCCATGGCAGAGGTTCTCAATGTGGTTCCACCACCCTATCTTACACCTGTTACTGCTGTGGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339534.4 |
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