Pregenerated sensors for ZCCHC12 (Homo sapiens)
Ensembl gene IDs: ENSG00000174460Ensembl transcript IDs: ENST00000310164.3
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATATCTCCCTCCAATGTaGTGGTATCCAAGACCCTTT | + |
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Preference number: 2 (lower is better) Translates to: RKWAHTENRPVGCREKEQYLPPM*WYPRPF Trigger: AAAGGGTCTTGGATACCAGCACATTGGAGGGAGATA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGCTGCCCGAAGGAGCTaGTTCGCAGGGCCGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQAARRS*FAGPPN Trigger: GTTGGGCGGCCCTGCGAAGCAGCTCCTTCGGGCAGC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAAACCAGTGCCCTCCGTaGGAAAGCTCCTCTCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQNQCPP*ESSSPG Trigger: CCCCGGAGAGGAGCTTTCTCACGGAGGGCACTGGTT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACTGGTGGACAGCAGATaGTCCCGCGTCGCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQLVDSR*SRVASC Trigger: ACAGCTGGCGACGCGGGAGCATCTGCTGTCCACCAG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACCAAGGCGGCAAGGGTaGATTCAGCCGCCGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQPRRQG*IQPPAV Trigger: AACAGCCGGCGGCTGAATGCACCCTTGCCGCCTTGG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGTGGATTCCGCCTTCTaGTCTCCGCCTTGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQVDSAF*SPPCRR Trigger: CCGCCTGCAAGGCGGAGACCAGAAGGCGGAATCCAC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACCGCGTCGCCAGCTGTaGATTCCGCCTTCTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQPRRQL*IPPSGL Trigger: GAGACCAGAAGGCGGAATCCACAGCTGGCGACGCGG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATGGCCTGTGCTCCGCTaGTGGACAGCAGATGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQWPVLR*WTADAP Trigger: GGGAGCATCTGCTGTCCACCAGCGGAGCACAGGCCA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACCAGGGACCTCAGCATaGAATGGGCCCAAGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQPGTSA*NGPKAA Trigger: TGCCGCCTTGGGCCCATTCCATGCTGAGGTCCCTGG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGTTCAGATGCGGCTTTaGTGGCCTGTGCTCCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQVQMRL*WPVLRW Trigger: CCAGCGGAGCACAGGCCATCAAAGCCGCATCTGAAC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGGCTTTGATGGCCTGTaGTCCGCTGGTGGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQGFDGL*SAGGQQ Trigger: CTGCTGTCCACCAGCGGAGCACAGGCCATCAAAGCC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATGGGGAGCCCTGAAATaGCACAGGGCTGACTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQWGALK*HRADCP Trigger: AGGGCAGTCAGCCCTGTGGCATTTCAGGGCTCCCCA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGACCTCAGCATGGAATaGGCCCAAGGCGGCAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQDLSME*AQGGKG Trigger: ACCCTTGCCGCCTTGGGCCCATTCCATGCTGAGGTC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATTCTTCCCCTTGGGCTaGCACCACCCTCCCCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQFFPLG*HHPPRE Trigger: TTCTCGGGGAGGGTGGTGCCAGCCCAAGGGGAAGAA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAAAGGTTTCTTCCCCTTaGGCTGGCACCACCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQKVSSP*AGTTLP Trigger: GGGGAGGGTGGTGCCAGCCCAAGGGGAAGAAACCTT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAAGGGGCACCCCAGGATaGAAGTGGAGGGTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQRGTPG*KWRVLR Trigger: TCTCAGGACCCTCCACTTCCATCCTGGGGTGCCCCT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGGAAGTGGAGGGTCCTaGGACTCCACCAGGATCACA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQGSGGS*DSTRIT Trigger: TGTGATCCTGGTGGAGTCTCAGGACCCTCCACTTCC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGCCAGGGGCCACTCTTaGCCTCTCCATCTCAGTATG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQARGHS*PLHLSM Trigger: CATACTGAGATGGAGAGGTCAAGAGTGGCCCCTGGC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGAGAGGAGGTGGCTCTaGCTTCCTATCTCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQERRWL*LPISAG Trigger: CCCTGCTGAGATAGGAAGGCAGAGCCACCTCCTCTC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGCCGATCACTATCGGTaGGGAGCCCTGAAATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQADHYR*GALKCH Trigger: GTGGCATTTCAGGGCTCCCCACCGATAGTGATCGGC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAACCCCAGGATGGAAGTaGAGGGTCCTGAGACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQTPGWK*RVLRLH Trigger: GTGGAGTCTCAGGACCCTCCACTTCCATCCTGGGGT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACATTGCAGTCAGCACTaGCGATCACTATCGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQHCSQH*RSLSVG Trigger: CCCCACCGATAGTGATCGGCAGTGCTGACTGCAATG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGGAGAGGAGAGGAGGTaGCTCTGCCTTCCTATCTCA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQGEERR*LCLPIS Trigger: TGAGATAGGAAGGCAGAGCCACCTCCTCTCCTCTCC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAACTGAAACCTGGGGGTaGTCCCTTACAGTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQTETWG*SLTVAQ Trigger: CTGAGCCACTGTAAGGGACCACCCCCAGGTTTCAGT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGGGTTCACTGAAACCTaGGGGTGGTCCCTTACAGTG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQGFTET*GWSLTV Trigger: CACTGTAAGGGACCACCCCCAGGTTTCAGTGAACCC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGCAGGGGACGAACTCTaGAACAAGAGCGCGTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQAGDEL*NKSASL Trigger: TAAAGACGCGCTCTTGTTTCAGAGTTCGTCCCCTGC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATTCTGGTCTCCGCCTTaGAGGCGGCAAAGAACTGAA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQFWSPP*RRQRTE Trigger: TTCAGTTCTTTGCCGCCTGCAAGGCGGAGACCAGAA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACCTAAAAGGAGCTGCTaGAAGCGAGTCCGGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQPKRSC*KRVRFA Trigger: TGCAAACCGGACTCGCTTGCAGCAGCTCCTTTTAGG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACTCTCCATCTCAGTATaGGTCAGCTCCTGGAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQLSISV*VSSWRV Trigger: CACTCTCCAGGAGCTGACCCATACTGAGATGGAGAG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAATCCGGGTCCAGCTCTaGAATCAGCTGCACAGAATT | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQIRVQL*NQLHRI Trigger: AATTCTGTGCAGCTGATTGCAGAGCTGGACCCGGAT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGCTGTTACCGACACGTaGAATGATGCTAGCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQAVTDT*NDASHD Trigger: GTCATGGCTAGCATCATTGCACGTGTCGGTAACAGC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATTGGGAAGCCGCTCCTaGTCATTTGCATACATCCTG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQLGSRS*SFAYIL Trigger: CAGGATGTATGCAAATGAGCAGGAGCGGCTTCCCAA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATTAACTCCAGAAAGTTaGGAAGCCGCTCCTGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQLTPES*EAAPAH Trigger: ATGAGCAGGAGCGGCTTCCCAACTTTCTGGAGTTAA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGGTGGTCCCTTACAGTaGCTCAGAGAAGTCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQGGPLQ*LREVIV Trigger: TACAATGACTTCTCTGAGCCACTGTAAGGGACCACC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR TCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACCTCCCTTACCATTCTaGTTAACTCCAGAAAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQPPLPF*LTPESW Trigger: CCAACTTTCTGGAGTTAATCAGAATGGTAAGGGAGG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACTTCATGTTTCTGTCTaGCATGCTGGCCATTATAGG | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQLHVSV*HAGHYR Trigger: CCTATAATGGCCAGCATGGCAGACAGAAACATGAAG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACCGCTCCTGCTCATTTaGATACATCCTGAGAAAATC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQPLLLI*IHPEKI Trigger: GATTTTCTCAGGATGTATGCAAATGAGCAGGAGCGG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR GCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACTATCTCTATCACATTaGAGTCAGCACTGCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQLSLSH*SQHCRS Trigger: TGATCGGCAGTGCTGACTGCAATGTGATAGAGATAG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGTATGGGTCAGCTCCTaGAGAGTGATGATCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQVWVSS*RVMIKF Trigger: GAATTTGATCATCACTCTCCAGGAGCTGACCCATAC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAAAGCTGTCAAGGAAATaGGCACACACAGAAAACAGA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQKLSRK*AHTENR Trigger: TCTGTTTTCTGTGTGTGCCCATTTCCTTGACAGCTT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CCA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAATGCATATATCTATCTaGGTACATAGGTATAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: RKWAHTENRPVGCREKEQMHISI*VHRYRE Trigger: TTCCCTATACCTATGTACCCAGATAGATATATGCAT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 90 bp | TCAGATGCGGCTTTGATGGCCTGTGCTCCGCTGGTGGACAGCAGATaGTCCCGCGTCGCCAGCTGTGGATTCCGCCTTCTGGTCTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SDAALMACAPLVDSR*SRVASCGFRLLVSA Trigger: GGCGGAGACCAGAAGGCGGAATCCACAGCTGGCGACGCGGGAGCATCTGCTGTCCACCAGCGGAGCACAGGCCATCAAAGCCGCATCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 90 bp | TCTCCCCAGGGACCTCAGCATGGAATGGGCCCAAGGCGGCAAGGGTaGATTCAGCCGCCGGCTGTTACCGACACGTGCAATGATGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: SPQGPQHGMGPRRQG*IQPPAVTDTCNDAS Trigger: GCTAGCATCATTGCACGTGTCGGTAACAGCCGGCGGCTGAATGCACCCTTGCCGCCTTGGGCCCATTCCATGCTGAGGTCCCTGGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CAA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAAGTTCAGATGCGGCTTaGATGGCCTGTGCTCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: RKWAHTENRPVGCREKEQSSDAA*MACAPL Trigger: CAGCGGAGCACAGGCCATCAAAGCCGCATCTGAACT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CAA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATCTGGCAGGACGCCATaGACTTGGGTCAGCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: RKWAHTENRPVGCREKEQSGRTP*TWVSQF Trigger: AAACTGGCTGACCCAAGTCAATGGCGTCCTGCCAGA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CAA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAGGCTCAGAGAAGTCATaGTATTCGCCAGGGGCCACT | + |
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Preference number: 5 (lower is better) Translates to: RKWAHTENRPVGCREKEQGSEKS*YSPGAT Trigger: AGTGGCCCCTGGCGAATACAATGACTTCTCTGAGCC...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS TCA 90 bp | GAGAGGAGGTGGCTCTGCCTTCCTATCTCAGCAGGGGACGAACTCTaGAACAAGAGCGCGTCTTTATTTCACTTCCAGCCTCTGCAACCA | + |
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Preference number: 5 (lower is better) Translates to: ERRWLCLPISAGDEL*NKSASLFHFQPLQP Trigger: TGGTTGCAGAGGCTGGAAGTGAAATAAAGACGCGCTCTTGTTTCAGAGTTCGTCCCCTGCTGAGATAGGAAGGCAGAGCCACCTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 90 bp | AGTCTGAGTCGGAGGTCCCTACTCAGCTCACCGCCTAAAAGGAGCTaGTGCAAGCGAGTCCGGTTTGCATCTTTCTCAGCTATAATGCCT | + |
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Preference number: 5 (lower is better) Translates to: SLSRRSLLSSPPKRS*CKRVRFASFSAIMP Trigger: AGGCATTATAGCTGAGAAAGATGCAAACCGGACTCGCTTGCAGCAGCTCCTTTTAGGCGGTGAGCTGAGTAGGGACCTCCGACTCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CAA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAACAGGACGCCATTGACTaGGGTCAGCCAGTTTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: RKWAHTENRPVGCREKEQQDAID*GQPVFK Trigger: TTTGAAAACTGGCTGACCCAAGTCAATGGCGTCCTG...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CAA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAAATTAACTCCAGAAAGTaGGGAAGCCGCTCCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: RKWAHTENRPVGCREKEQINSRK*GSRSCS Trigger: TGAGCAGGAGCGGCTTCCCAACTTTCTGGAGTTAAT...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS-3UTR CAA 90 bp | AGGAAATGGGCACACACAGAAAACAGACCCGTAGGCTGCAGGGAGAAGGAGCAATCTATCTCTATCACATaGCAGTCAGCACTGCCGATC | + |
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Preference number: 5 (lower is better) Translates to: RKWAHTENRPVGCREKEQSISIT*QSALPI Trigger: GATCGGCAGTGCTGACTGCAATGTGATAGAGATAGA...TTGCTCCTTCTCCCTGCAGCCTACGGGTCTGTTTTCTGTGTGTGCCCATTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 90 bp | TCCCTTACCATTCTGATTAACTCCAGAAAGTTGGGAAGCCGCTCCTaGTCATTTGCATACATCCTGAGAAAATCCTTAAGTCTGAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: SLTILINSRKLGSRS*SFAYILRKSLSLSR Trigger: CCGACTCAGACTTAAGGATTTTCTCAGGATGTATGCAAATGAGCAGGAGCGGCTTCCCAACTTTCTGGAGTTAATCAGAATGGTAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 72 bp | TCGCCAGCTGTGGATTCCGCCTTCTGGTCTCCGCCTTaGAGGCGGCAAAGAACTGAAGCCTCCTTGGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SPAVDSAFWSPP*RRQRTEASLAA Trigger: AGCGGCCAAGGAGGCTTCAGTTCTTTGCCGCCTGCAAGGCGGAGACCAGAAGGCGGAATCCACAGCTGGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 72 bp | GGACCTCAGCATGGAATGGGCCCAAGGCGGCAAGGGTaGATTCAGCCGCCGGCTGTTACCGACACGTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GPQHGMGPRRQG*IQPPAVTDTCN Trigger: ATTGCACGTGTCGGTAACAGCCGGCGGCTGAATGCACCCTTGCCGCCTTGGGCCCATTCCATGCTGAGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 72 bp | CGGAGGTCCCTACTCAGCTCACCGCCTAAAAGGAGCTaGTGCAAGCGAGTCCGGTTTGCATCTTTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRSLLSSPPKRS*CKRVRFASFSA Trigger: AGCTGAGAAAGATGCAAACCGGACTCGCTTGCAGCAGCTCCTTTTAGGCGGTGAGCTGAGTAGGGACCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS CCA 72 bp | AAGGGTTCACTGAAACCTGGGGGTGGTCCCTTACAGTaGCTCAGAGAAGTCATTGTATTCGCCAGGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: KGSLKPGGGPLQ*LREVIVFARGH Trigger: GTGGCCCCTGGCGAATACAATGACTTCTCTGAGCCACTGTAAGGGACCACCCCCAGGTTTCAGTGAACCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 72 bp | CACCACCCTCCCCGAGAACAACTTCATGTTTCTGTCTaGCATGCTGGCCATTATAGGACCGAGACTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: HHPPREQLHVSV*HAGHYRTETSP Trigger: GGGAGAAGTCTCGGTCCTATAATGGCCAGCATGGCAGACAGAAACATGAAGTTGTTCTCGGGGAGGGTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 72 bp | AGGTCCCTACTCAGCTCACCGCCTAAAAGGAGCTGCTaGAAGCGAGTCCGGTTTGCATCTTTCTCAGCTATA | + |
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Preference number: 6 (lower is better) Translates to: RSLLSSPPKRSC*KRVRFASFSAI Trigger: TATAGCTGAGAAAGATGCAAACCGGACTCGCTTGCAGCAGCTCCTTTTAGGCGGTGAGCTGAGTAGGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS TCA 72 bp | TGGCTCTGCCTTCCTATCTCAGCAGGGGACGAACTCTaGAACAAGAGCGCGTCTTTATTTCACTTCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: WLCLPISAGDEL*NKSASLFHFQP Trigger: AGGCTGGAAGTGAAATAAAGACGCGCTCTTGTTTCAGAGTTCGTCCCCTGCTGAGATAGGAAGGCAGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS TCA 72 bp | CCTCCTCAGACATATTCCAATCTGGCAGGACGCCATTaGCTTGGGTCAGCCAGTTTTCAAAGGTTTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: PPQTYSNLAGRH*LGSASFQRFLP Trigger: GGGAAGAAACCTTTGAAAACTGGCTGACCCAAGTCAATGGCGTCCTGCCAGATTGGAATATGTCTGAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS TCA 72 bp | GTCCGGTTTGCATCTTTCTCAGCTATAATGCCTGCCTaGATAGCGTTCTGGAGCTGCACCTCTAAACGGATC | + |
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Preference number: 6 (lower is better) Translates to: VRFASFSAIMPA*IAFWSCTSKRI Trigger: GATCCGTTTAGAGGTGCAGCTCCAGAACGCTATTCAGGCAGGCATTATAGCTGAGAAAGATGCAAACCGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS CAA 72 bp | CTCAGACATATTCCAATCTGGCAGGACGCCATTGACTaGGGTCAGCCAGTTTTCAAAGGTTTCTTCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRHIPIWQDAID*GQPVFKGFFPL Trigger: CAAGGGGAAGAAACCTTTGAAAACTGGCTGACCCAAGTCAATGGCGTCCTGCCAGATTGGAATATGTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS CAA 72 bp | TCCTCCTCAGACATATTCCAATCTGGCAGGACGCCATaGACTTGGGTCAGCCAGTTTTCAAAGGTTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSDIFQSGRTP*TWVSQFSKVSS Trigger: GGAAGAAACCTTTGAAAACTGGCTGACCCAAGTCAATGGCGTCCTGCCAGATTGGAATATGTCTGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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| CDS GCA 72 bp | ATTCTGATTAACTCCAGAAAGTTGGGAAGCCGCTCCTaGTCATTTGCATACATCCTGAGAAAATCCTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: ILINSRKLGSRS*SFAYILRKSLS Trigger: ACTTAAGGATTTTCTCAGGATGTATGCAAATGAGCAGGAGCGGCTTCCCAACTTTCTGGAGTTAATCAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310164.3 |
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