Pregenerated sensors for ZCCHC10 (Homo sapiens)
Ensembl gene IDs: ENSG00000155329Ensembl transcript IDs: ENST00000355372.6, ENST00000504170.2, ENST00000509008.1, ENST00000509437.6, ENST00000513541.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTaGTACTGCTACTGGAAGAGCTGGAATCTGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: LVVHRQSCYLCW*YCYWKSWNLSL Trigger: CAGACTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| 3UTR CCA 72 bp | TCTTTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTaGTGCTACTGCTACTGGAAGAGCTGGAATCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLVVHRQSCYLC*CYCYWKSWNLS Trigger: ACTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR GCA 90 bp | TCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGAGCTGGAATCTGAGCAGAGCTGCTATCTGTaGTGGTGCTACTGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SELLSVLVLLLLEELESEQSCYL*WCYCYW Trigger: CCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTG...CTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGCTGTGCTGGTGCTACTaGTACTGGAAGAGCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVVHRQSCYLCWCYCYWKLCWCY*YWKSWN Trigger: ATTCCAGCTCTTCCAGTAGCAGTAGCACCAGCACAG...CTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGTGCTATCTGTGCTGGTaGTACTGCTACTGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVVHRQSCYLCWCYCYWKCYLCW*YCYWKS Trigger: GCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCA...CTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR GCA 90 bp | CTTTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGATGCTATCTGTGCTGGTaGTACTGCTACTGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWWFIVRAAICAGATATGCYLCW*YCYWKS Trigger: GCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCA...TCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR GCA 90 bp | TTTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAACAGAGCTGCTATCTGTaGTGGTGCTACTGCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGGSSSELLSVLVLLLLEQSCYL*WCYCYW Trigger: CCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTG...TTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGGTTCATCGTCAGAGCTaGTATCTGTGCTGGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVVHRQSCYLCWCYCYWKVHRQS*YLCWCY Trigger: GTAGCACCAGCACAGATAGCAGCTCTGACGATGAAC...CTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR CCA 90 bp | TCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGAGCTGGAATCTGAGAGCTGCTATCTGTGCTaGTGCTACTGCTACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SELLSVLVLLLLEELESESCYLC*CYCYWK Trigger: CTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCT...CTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR CCA 90 bp | CTTTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGCTGCTATCTGTGCTaGTGCTACTGCTACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWWFIVRAAICAGATATGSCYLC*CYCYWK Trigger: CTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCT...TCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR CCA 90 bp | TGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGATGGTGCTACTGCTACTaGAAGAGCTGGAATCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WWFIVRAAICAGATATGRWCYCY*KSWNLS Trigger: ACTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCA...TCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR CCA 90 bp | CTTTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGATGGTGCTACTGCTACTaGAAGAGCTGGAATCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWWFIVRAAICAGATATGWCYCY*KSWNLS Trigger: ACTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCA...TCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR TCA 90 bp | CTTTGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAATAACGATGGATGGCTaGATCAGGATCCAAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWWFIVRAAICAGATATGITMDG*IRIQKV Trigger: GACCTTTTGGATCCTGATTCAGCCATCCATCGTTAT...TCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513541.5 |
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| CDS-3UTR TCA 90 bp | TCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGAGCTGGAATCTGAGTCCATCAGTCCAATATaGATGGAGCAACTCTATTTC | + |
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Preference number: 4 (lower is better) Translates to: SELLSVLVLLLLEELESESISPI*MEQLYF Trigger: GAAATAGAGTTGCTCCATTCATATTGGACTGATGGA...CTCAGATTCCAGCTCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS-3UTR TCA 90 bp | TGGTGGTTCATCGTCAGAGCTGCTATCTGTGCTGGTGCTACTGCTACTGGAAGATCCATCAGTCCAATATaGATGGAGCAACTCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: WWFIVRAAICAGATATGRSISPI*MEQLYF Trigger: GAAATAGAGTTGCTCCATTCATATTGGACTGATGGA...TCTTCCAGTAGCAGTAGCACCAGCACAGATAGCAGCTCTGACGATGAACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000509008.1 ENST00000513541.5 |
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| CDS CCA 72 bp | ACCAGCCTGGGCAACACTGTCTCTAATAACGATGGATaGCTGAATCAGGATCCAAAAGGTCTTGACAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSLGNTVSNNDG*LNQDPKGLDRL Trigger: CAGCCTGTCAAGACCTTTTGGATCCTGATTCAGCCATCCATCGTTATTAGAGACAGTGTTGCCCAGGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504170.2 |
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| CDS TCA 72 bp | TGTTGCTTATTTGCTTCACTAATAACGATGGATGGCTaGATCAGGATCCAAAAGGTCTTGACAGGCTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: CCLFASLITMDG*IRIQKVLTGCN Trigger: GTTGCAGCCTGTCAAGACCTTTTGGATCCTGATTCAGCCATCCATCGTTATTAGTGAAGCAAATAAGCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000355372.6 ENST00000509437.6 ENST00000513541.5 |
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