RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC4H2 (Homo sapiens)

Ensembl gene IDs: ENSG00000126970

Ensembl transcript IDs: ENST00000337990.2, ENST00000374839.8, ENST00000447788.6, ENST00000476032.1, ENST00000488406.1, ENST00000488608.5, ENST00000488831.5, ENST00000492653.5

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTTAGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTaGGCCTTTTGCCCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTG +
Preference number: 1 (lower is better)
Translates to: SLGSRPQAQEIENHI*AFCPSLSSKQGQGL
Trigger: CAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR CCA 90 bp TGCCCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCA +
Preference number: 1 (lower is better)
Translates to: CPSLSSKQGQGLKCE*ERRDHQTHCLAPEP
Trigger: TGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 90 bp TGCACCCAGCCTGTTGGAGAATCCAACATGAAGACTATTGTCCCTTaGGAACCTAAGGCAAAAGTACAAGGAGGGGAAATACTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: CTQPVGESNMKTIVP*EPKAKVQGGEILGP
Trigger: AGGACCCAGTATTTCCCCTCCTTGTACTTTTGCCTTAGGTTCTCAAGGGACAATAGTCTTCATGTTGGATTCTCCAACAGGCTGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 90 bp AGGAGTAGGGGGATACATGCACCCAGCCTGTTGGAGAATCCAACATaGAGACTATTGTCCCTTGAGAACCTAAGGCAAAAGTACAAGGAG +
Preference number: 1 (lower is better)
Translates to: RSRGIHAPSLLENPT*RLLSLENLRQKYKE
Trigger: CTCCTTGTACTTTTGCCTTAGGTTCTCAAGGGACAATAGTCTTCATGTTGGATTCTCCAACAGGCTGGGTGCATGTATCCCCCTACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 90 bp TTAGGCAGTAGGTTAGGCAGGAGATGTAGAGTTGGTCTGGCTCACTaGTTTCACTGTGGAAATCTTCTACTAGAATTTGCAAAGACTAGA +
Preference number: 1 (lower is better)
Translates to: LGSRLGRRCRVGLAH*FHCGNLLLEFAKTR
Trigger: TCTAGTCTTTGCAAATTCTAGTAGAAGATTTCCACAGTGAAATCAGTGAGCCAGACCAACTCTACATCTCCTGCCTAACCTACTGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR GCA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCGATATGGGCCTCCCCTaGCCCTCAGACCCTACAGCT +
Preference number: 2 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPDMGLP*PSDPTA
Trigger: AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATC...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp TCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCGAAATAGGAGCAAAGTaGGAGAGGGGTTGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: SAWGHSQPKEAPTAEPSAEIGAK*ERGCAS
Trigger: GGAAGCACAACCCCTCTCTCACTTTGCTCCTATTTC...GGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAACTGGGTCCTTTACCTaGAACAAGATATGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: AWGHSQPKEAPTAEPSALTGSFT*NKIWAS
Trigger: GGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGT...TAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp TCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCACACTGTTTAGCACCTaGACCACATCTCTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: SAWGHSQPKEAPTAEPSATLFST*TTSLPK
Trigger: TTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGT...GGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTATTGGAGAATCCAACATaGAGACTATTGTCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: AWGHSQPKEAPTAEPSALLENPT*RLLSLE
Trigger: CTCAAGGGACAATAGTCTTCATGTTGGATTCTCCAA...TAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CCA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAG +
Preference number: 2 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMGLKCE*ERRDHQ
Trigger: CTGATGATCCCTTCTCTCCCACTCACATTTCAACCC...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGGTTGGTCTGGCTCACTaGTTTCACTGTGGAAATCTT +
Preference number: 2 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMVGLAH*FHCGNL
Trigger: AAGATTTCCACAGTGAAATCAGTGAGCCAGACCAAC...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCCAAGAGAGCAAGGGATaGATGGAAGGAAAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGQESKG*MEGKSH
Trigger: GTGGGACTTTCCTTCCATTCATCCCTTGCTCTCTTG...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCAGAGCAAGGGATGAATaGAAGGAAAGTCCCACCCAC +
Preference number: 2 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGRARDE*KESPTH
Trigger: GTGGGTGGGACTTTCCTTCCATTCATCCCTTGCTCT...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGAACTGGGTCCTTTACCTaGAACAAGATATGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GVASSYPELRLQKSSDPRTGSFT*NKIWAS
Trigger: GGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGT...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAG +
Preference number: 2 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGGLKCE*ERRDHQ
Trigger: CTGATGATCCCTTCTCTCCCACTCACATTTCAACCC...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGGAGACTTCGTGGGGTTaGGCAAGGGTTGTTTCACAT +
Preference number: 2 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWETSWG*ARVVSH
Trigger: ATGTGAAACAACCCTTGCCCAACCCCACGAAGTCTC...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGGAGACTTCGTGGGGTTaGGCAAGGGTTGTTTCACAT +
Preference number: 2 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRETSWG*ARVVSH
Trigger: ATGTGAAACAACCCTTGCCCAACCCCACGAAGTCTC...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CCA 90 bp AAATACTGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAG +
Preference number: 2 (lower is better)
Translates to: KYWVLYLKQDMGLPCPSDGLKCE*ERRDHQ
Trigger: CTGATGATCCCTTCTCTCCCACTCACATTTCAACCC...GTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR CAA 90 bp GCTTCCATCACATTAAATAGGAGACTTCGTGGGGTTGGGCAAGGGTaGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGT +
Preference number: 2 (lower is better)
Translates to: ASITLNRRLRGVGQG*FHIRTSMTLVKVRG
Trigger: ACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACCCCACGAAGTCTCCTATTTAATGTGATGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR GCA 90 bp GAGAGGTTTTATTTAGCTGTTGAATTCCCTGACAAGCACAGAGACAGATTAGTGGATATGGGCCTCCCCTaGCCCTCAGACCCTACAGCT +
Preference number: 2 (lower is better)
Translates to: ERFYLAVEFPDKHRDRLVDMGLP*PSDPTA
Trigger: AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATC...CACTAATCTGTCTCTGTGCTTGTCAGGGAATTCAACAGCTAAATAAAACCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CCA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGATGCACCCAGCCTGTTaGAGAATCCAACATGAAGAC +
Preference number: 2 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRMHPAC*RIQHED
Trigger: GTCTTCATGTTGGATTCTCCAACAGGCTGGGTGCAT...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACAGGCCAGCAGCTATCCTaGGCTGAGGCTCCAGAAGAG +
Preference number: 2 (lower is better)
Translates to: GGMNKSKQELPRKVNDITGQQLS*AEAPEE
Trigger: CTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCC...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR GCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGATACCATTGAGCATGTaGCAGAGTAATGGTTCTGAA +
Preference number: 2 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWIPLSM*QSNGSE
Trigger: TTCAGAACCATTACTCTGGCACATGCTCAATGGTAT...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR CAA 90 bp AAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTaGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: KELQPCLPNDYEKEG*SKLPLGLKDEMRVG
Trigger: TCCTACCCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GCAAAAGTACAAGGAGGGGAAATACTGGGTCCTTTACCTGAAACAAGATATGGGGAAATAGGAGCAAAGTaGGAGAGGGGTTGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: AKVQGGEILGPLPETRYGEIGAK*ERGCAS
Trigger: GGAAGCACAACCCCTCTCTCACTTTGCTCCTATTTC...CCCATATCTTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTTGTACTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGGAAATAGGAGCAAAGTaGGAGAGGGGTTGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: THCLAPEPHLFLNQKSQEEIGAK*ERGCAS
Trigger: GGAAGCACAACCCCTCTCTCACTTTGCTCCTATTTC...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GAGAGGTTTTATTTAGCTGTTGAATTCCCTGACAAGCACAGAGACAGATTAGTGACTGGGTCCTTTACCTaGAACAAGATATGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: ERFYLAVEFPDKHRDRLVTGSFT*NKIWAS
Trigger: GGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGT...CACTAATCTGTCTCTGTGCTTGTCAGGGAATTCAACAGCTAAATAAAACCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp GCAAAAGTACAAGGAGGGGAAATACTGGGTCCTTTACCTGAAACAAGATATGGGATAGAGAATCATATCTaGGCCTTTTGCCCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: AKVQGGEILGPLPETRYGIENHI*AFCPSL
Trigger: AAGGGAAGGGCAAAAGGCTCAGATATGATTCTCTAT...CCCATATCTTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTTGTACTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR CAA 90 bp AAGCACAGAGACAGATTAGTGTACAGGATATTATTTAGAGAGCCCTaGGCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: KHRDRLVYRILFREP*AFISLNQSFDTQFL
Trigger: CAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGCCAAGGGCTCTCTAAATAATATCCTGTACACTAATCTGTCTCTGTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGAACACTGTTTAGCACCTaGACCACATCTCTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: THSLVPKNFSICGRQKWRTLFST*TTSLPK
Trigger: TTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGT...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGATAGAGAATCATATCTaGGCCTTTTGCCCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWIENHI*AFCPSL
Trigger: AAGGGAAGGGCAAAAGGCTCAGATATGATTCTCTAT...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGAATAGAGAATCATATCTaGGCCTTTTGCCCTTCCCTT +
Preference number: 2 (lower is better)
Translates to: THSLVPKNFSICGRQKWRIENHI*AFCPSL
Trigger: AAGGGAAGGGCAAAAGGCTCAGATATGATTCTCTAT...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGTTGGAGAATCCAACATaGAGACTATTGTCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWLENPT*RLLSLE
Trigger: CTCAAGGGACAATAGTCTTCATGTTGGATTCTCCAA...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGAAAGACTATTGTCCCTTaGGAACCTAAGGCAAAAGTA +
Preference number: 2 (lower is better)
Translates to: THSLVPKNFSICGRQKWRKTIVP*EPKAKV
Trigger: TACTTTTGCCTTAGGTTCTCAAGGGACAATAGTCTT...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR TCA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGCCTTCATGTGTAAAGTaGTTGGCATTTACTCAAATC +
Preference number: 2 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRPSCVK*LAFTQI
Trigger: GATTTGAGTAAATGCCAATCACTTTACACATGAAGG...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp GCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAAAACAAGGGCAGGGGTaGAAATGTGAGTGGGAGAGA +
Preference number: 3 (lower is better)
Translates to: AWGHSQPKEAPTAEPSALKQGQG*KCEWER
Trigger: TCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTT...TAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTATGAAAAGGAGGGCTaGTCCAAGCTACCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPYEKEG*SKLPLG
Trigger: GCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp TCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCGCAGGAGATGTAGAGTaGGTCTGGCTCACTGATTTC +
Preference number: 3 (lower is better)
Translates to: SAWGHSQPKEAPTAEPSAAGDVE*VWLTDF
Trigger: GAAATCAGTGAGCCAGACCAACTCTACATCTCCTGC...GGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp TGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGGAGACTTCGTGGGGTaGGGCAAGGGTTGTTTCACA +
Preference number: 3 (lower is better)
Translates to: WVLYLKQDMGLPCPSDPTGDFVG*GKGCFT
Trigger: TGTGAAACAACCCTTGCCCAACCCCACGAAGTCTCC...TGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCAAAGTGAGAGAGGGGTaGTGCTTCCATCACATTAAA +
Preference number: 3 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPKVREG*CFHHIK
Trigger: TTTAATGTGATGGAAGCACAACCCCTCTCTCACTTT...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGAAAGTGAGAGAGGGGTaGTGCTTCCATCACATTAAA +
Preference number: 3 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMKVREG*CFHHIK
Trigger: TTTAATGTGATGGAAGCACAACCCCTCTCTCACTTT...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 72 bp CACAATCCACAGGACAGGAGTGGCCAGCAGCTATCCTaGGCTGAGGCTCCAGAAGAGTTCAGATCCAAGAGA +
Preference number: 3 (lower is better)
Translates to: HNPQDRSGQQLS*AEAPEEFRSKR
Trigger: TCTCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCCTGTCCTGTGGATTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGGGAGACTTCGTGGGGTaGGGCAAGGGTTGTTTCACA +
Preference number: 3 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRGDFVG*GKGCFT
Trigger: TGTGAAACAACCCTTGCCCAACCCCACGAAGTCTCC...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 72 bp TTTGCCCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTaGAATGTGAGTGGGAGAGAAGGGATCATCAGACAC +
Preference number: 3 (lower is better)
Translates to: FALPLAPNKGRG*NVSGREGIIRH
Trigger: GTGTCTGATGATCCCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 72 bp TCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTaGGCCTTTTGCCCTTCCCTTAGCTCCAAACAAGGG +
Preference number: 3 (lower is better)
Translates to: SRPQAQEIENHI*AFCPSLSSKQG
Trigger: CCCTTGTTTGGAGCTAAGGGAAGGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR CCA 72 bp AGGGTAGGAGTAGGGGGATACATGCACCCAGCCTGTTaGAGAATCCAACATGAAGACTATTGTCCCTTGAGA +
Preference number: 3 (lower is better)
Translates to: RVGVGGYMHPAC*RIQHEDYCPLR
Trigger: TCTCAAGGGACAATAGTCTTCATGTTGGATTCTCCAACAGGCTGGGTGCATGTATCCCCCTACTCCTACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGGGAGACTTCGTGGGGTaGGGCAAGGGTTGTTTCACA +
Preference number: 3 (lower is better)
Translates to: THCLAPEPHLFLNQKSQEGDFVG*GKGCFT
Trigger: TGTGAAACAACCCTTGCCCAACCCCACGAAGTCTCC...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR CCA 72 bp CTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAGACACACTGTTTAGCA +
Preference number: 3 (lower is better)
Translates to: LSSKQGQGLKCE*ERRDHQTHCLA
Trigger: TGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGTATGAAAAGGAGGGCTaGTCCAAGCTACCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWYEKEG*SKLPLG
Trigger: GCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 72 bp AGGTTAGGCAGGAGATGTAGAGTTGGTCTGGCTCACTaGTTTCACTGTGGAAATCTTCTACTAGAATTTGCA +
Preference number: 3 (lower is better)
Translates to: RLGRRCRVGLAH*FHCGNLLLEFA
Trigger: TGCAAATTCTAGTAGAAGATTTCCACAGTGAAATCAGTGAGCCAGACCAACTCTACATCTCCTGCCTAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR TCA 72 bp TCTAAATCTACTCCTCTCCTCCCTGCAATATACCATTaGGCATGTGCCAGAGTAATGGTTCTGAACAAAAGC +
Preference number: 3 (lower is better)
Translates to: SKSTPLLPAIYH*ACARVMVLNKS
Trigger: GCTTTTGTTCAGAACCATTACTCTGGCACATGCTCAATGGTATATTGCAGGGAGGAGAGGAGTAGATTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGGCAGGAGATGTAGAGTaGGTCTGGCTCACTGATTTC +
Preference number: 3 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRAGDVE*VWLTDF
Trigger: GAAATCAGTGAGCCAGACCAACTCTACATCTCCTGC...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
3UTR-3UTR CAA 90 bp AGTCAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTGGTAAATTATTGTCCTaGGTGCCTGGCTTTCTCATT +
Preference number: 3 (lower is better)
Translates to: SQIQSFILSNLHRYLAQSGKLLS*VPGFLI
Trigger: AATGAGAAAGCCAGGCACCAAGGACAATAATTTACC...ACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp TCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCGGCCAGCAGCTATCCTaGGCTGAGGCTCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SAWGHSQPKEAPTAEPSAGQQLS*AEAPEE
Trigger: CTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCC...GGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTGTGCGGTAGGGGCTTaGAGAGGCCTGGGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPCAVGA*RGLGAV
Trigger: TACAGCTCCCAGGCCTCTCCAAGCCCCTACCGCACA...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000447788.6
CDS-3UTR GCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGATTGGGCGGCAGCGGCTaGAGCGGCCAGGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: GVASSYPELRLQKSSDPRLGGSG*SGQGLR
Trigger: CCTGAGTCCCTGGCCGCTGCAGCCGCTGCCGCCCAA...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR GCA 90 bp GCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTACTGAAGGTGGCCGTCTaGCGAGTATCCTGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: AWGHSQPKEAPTAEPSALLKVAV*RVSCFL
Trigger: TAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAG...TAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CCA 90 bp GCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAACACAGATGTCAGCCTaGGGGCACTCTCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: AWGHSQPKEAPTAEPSALTQMSA*GHSQPK
Trigger: CTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGT...TAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTACCTTCAAACGAGCCTTaGTCTTCTCCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AWGHSQPKEAPTAEPSALPSNEP*SSPSAG
Trigger: CCCTGCAGATGGAGAAGATCAAGGCTCGTTTGAAGG...TAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAGAGACTTCGTGGGGTTaGGCAAGGGTTGTTTCACAT +
Preference number: 4 (lower is better)
Translates to: AWGHSQPKEAPTAEPSALETSWG*ARVVSH
Trigger: ATGTGAAACAACCCTTGCCCAACCCCACGAAGTCTC...TAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGCAGGAAACCTGGCTTTaGTGGAAAGGAGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMQETWL*WKGELW
Trigger: CCACAGCTCTCCTTTCCACCAAAGCCAGGTTTCCTG...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCAAGAGGGCATATAGGTaGATTCCGGTGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SAWGHSQPKEAPTAEPSAKRAYR*IPVNLL
Trigger: CAGCAAATTCACCGGAATGCACCTATATGCCCTCTT...GGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGGGGGCTATGAGCCTGTaGGGTAGGGGCTTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWGAMSL*GRGLER
Trigger: CCTCTCCAAGCCCCTACCGCACAGGCTCATAGCCCC...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000447788.6
CDS-3UTR CCA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGACATTGATGTCAGCGTaGATCAGTCGGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMTLMSA*ISRSSS
Trigger: GGAGGAACTCCGACTGATCCACGCTGACATCAATGT...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGATGCTTCCTAGCCACTTaGAGCTGTTGGGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GVASSYPELRLQKSSDPRCFLAT*SCWAAA
Trigger: CGCTGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCA...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTGCAGGCCTTCATAGGTaGGGGCTGCTGCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAAGLHR*GLLPEG
Trigger: ACCTTCAGGCAGCAGCCCCCACCTATGAAGGCCTGC...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CCA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGGAGACTTCGTGGGGTTaGGCAAGGGTTGTTTCACAT +
Preference number: 4 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMETSWG*ARVVSH
Trigger: ATGTGAAACAACCCTTGCCCAACCCCACGAAGTCTC...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGAAGTCAGGGAGCCTCTaGAGGCCCAGAGTCATGCGC +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWKSGSL*RPRVMR
Trigger: GCGCATGACTCTGGGCCTGCAGAGGCTCCCTGACTT...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATTTGGGCGGCAGCGGCTaGAGCGGCCAGGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYLGGSG*SGQGLR
Trigger: CCTGAGTCCCTGGCCGCTGCAGCCGCTGCCGCCCAA...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR GCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGTTCATAGGTGGGGGCTaGTGCCTGAAGGTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRFIGGG*CLKVAV
Trigger: GACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAA...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR GCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGGATATGGGCCTCCCCTaGCCCTCAGACCCTACAGCT +
Preference number: 4 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRDMGLP*PSDPTA
Trigger: AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATC...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCGCTGGCTCCAAATCCTaGAATTTCCTCTTACTAGCT +
Preference number: 4 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPAGSKS*NFLLLA
Trigger: AGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGC...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGTGCTTCCTAGCCACTTaGAGCTGTTGGGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRCFLAT*SCWAAA
Trigger: CGCTGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCA...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CCA 90 bp TCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCAAGGAGGGGAAATACTaGGTCCTTTACCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: SAWGHSQPKEAPTAEPSAKEGKY*VLYLKQ
Trigger: TTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTT...GGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTTCCACAGGACAGGAGTaGCCAGCAGCTATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTASTGQE*PAAILS
Trigger: GCTCAGGATAGCTGCTGGCCACTCCTGTCCTGTGGA...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGTTGATCTTCTCCATCTaGAGGGTCTTGTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMLIFSI*RVLFLI
Trigger: GATCAGGAACAAGACCCTGCAGATGGAGAAGATCAA...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTTCCGTTTCGGCTTTTTaGGGTTCCGGGACCGACTCT +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTASVSAF*GSGTDS
Trigger: AGAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGA...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCAAGGAGGGGAAATACTaGGTCCTTTACCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPKEGKY*VLYLKQ
Trigger: TTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTT...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTGAAACCTGGCTTTGGTaGAAAGGAGAGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAETWLW*KGELWG
Trigger: GCCCCACAGCTCTCCTTTCCACCAAAGCCAGGTTTC...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCGAAATAGGAGCAAAGTaGGAGAGGGGTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGEIGAK*ERGCAS
Trigger: GGAAGCACAACCCCTCTCTCACTTTGCTCCTATTTC...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCGATATGGGCCTCCCCTaGCCCTCAGACCCTACAGCT +
Preference number: 4 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLDMGLP*PSDPTA
Trigger: AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATC...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGATATGGGCCTCCCCTaGCCCTCAGACCCTACAGCT +
Preference number: 4 (lower is better)
Translates to: GWARVVSHQDINDSGQGEDMGLP*PSDPTA
Trigger: AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATC...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGGGAGGAAAGGCCACCTaGACAATCCACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWGGKAT*TIHRTG
Trigger: TCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCC...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGCGGAGTTCCTCCACATaGGCCATCTTCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWRSSST*AIFSCS
Trigger: GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCG...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGCGGAGTTCCTCCACATaGGCCATCTTCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRRSSST*AIFSCS
Trigger: GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCG...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGTCCGGGACCGACTCTTaGCCTTGCAAAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWSGTDS*PCKEGI
Trigger: TATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGA...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGTCCGGGACCGACTCTTaGCCTTGCAAAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRSGTDS*PCKEGI
Trigger: TATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGA...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGTCCGTTTCGGCTTTTTaGGGTTCCGGGACCGACTCT +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRSVSAF*GSGTDS
Trigger: AGAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGA...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCCCTTACCAGGAAACCTaGCTTTGGTGGAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGPYQET*LWWKGE
Trigger: CTCTCCTTTCCACCAAAGCCAGGTTTCCTGGTAAGG...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGCCTTCAAACGAGCCTTaGTCTTCTCCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRPSNEP*SSPSAG
Trigger: CCCTGCAGATGGAGAAGATCAAGGCTCGTTTGAAGG...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp TGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAACTGGGTCCTTTACCTaGAACAAGATATGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WVLYLKQDMGLPCPSDPTTGSFT*NKIWAS
Trigger: GGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGT...TGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCCCTTCATGTGTAAAGTaGTTGGCATTTACTCAAATC +
Preference number: 4 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPPSCVK*LAFTQI
Trigger: GATTTGAGTAAATGCCAATCACTTTACACATGAAGG...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp TGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAACATTGATGTCAGCGTaGATCAGTCGGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: WVLYLKQDMGLPCPSDPTTLMSA*ISRSSS
Trigger: GGAGGAACTCCGACTGATCCACGCTGACATCAATGT...TGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGTCCACAGGACAGGAGTaGCCAGCAGCTATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRSTGQE*PAAILS
Trigger: GCTCAGGATAGCTGCTGGCCACTCCTGTCCTGTGGA...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGACAAAGCTGGCTCCAAATCCTGCAATTTCCTCTTACTAGCTGTTTAACTCTGCACCTCCTCCGGGCTTaGGGCTATGAGCCTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GQSWLQILQFPLTSCLTLHLLRA*GYEPVR
Trigger: CCGCACAGGCTCATAGCCCCAAGCCCGGAGGAGGTG...CAGAGTTAAACAGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGCTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447788.6
CDS-3UTR TCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCTGTTTTCCATCACATTaGTGTCAGCGTGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGCFPSH*CQRGSV
Trigger: GACTGATCCACGCTGACATCAATGTGATGGAAAACA...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATGGCCAGCAGCTATCCTaGGCTGAGGCTCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYGQQLS*AEAPEE
Trigger: CTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCC...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGTCCCTTATCTTCGAGTaGCCTTACCAGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRSLIFE*PYQETW
Trigger: CCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGA...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGCCGGGCTTGGGGCTATaGGCCTGTGCGGTAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWPGLGL*ACAVGA
Trigger: AGCCCCTACCGCACAGGCTCATAGCCCCAAGCCCGG...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447788.6
CDS-3UTR GCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGAAGAAGGTCCATCTCCTaGTTGTATTCCTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GVASSYPELRLQKSSDPRRRSIS*LYSFRC
Trigger: GCACCTGAAGGAATACAAGCAGGAGATGGACCTTCT...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCGGCTTATACTCATCATaGAGCCTCCTTGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGGLYSS*SLLVDS
Trigger: AGAGTCTACAAGGAGGCTGCATGATGAGTATAAGCC...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGGGAGGAAAGGCCACCTaGACAATCCACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRGGKAT*TIHRTG
Trigger: TCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCC...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGAATTATTGTCCTTGGTaGCTGGCTTTCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMNYCPW*LAFSFV
Trigger: TACAAATGAGAAAGCCAGGCACCAAGGACAATAATT...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGACATTGATGTCAGCGTaGATCAGTCGGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRTLMSA*ISRSSS
Trigger: GGAGGAACTCCGACTGATCCACGCTGACATCAATGT...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGTCCGGGACCGACTCTTaGCCTTGCAAAGAGGGCATA +
Preference number: 4 (lower is better)
Translates to: GWARVVSHQDINDSGQGESGTDS*PCKEGI
Trigger: TATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGA...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGAGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: GVASSYPELRLQKSSDPRGLKCE*ERRDHQ
Trigger: CTGATGATCCCTTCTCTCCCACTCACATTTCAACCC...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGACACAGATGTCAGCCTaGGGGCACTCTCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: GWARVVSHQDINDSGQGETQMSA*GHSQPK
Trigger: CTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGT...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGAGAGCAAGGGATGAATaGAAGGAAAGTCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRRARDE*KESPTH
Trigger: GTGGGTGGGACTTTCCTTCCATTCATCCCTTGCTCT...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGCCTTCAAACGAGCCTTaGTCTTCTCCATCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRPSNEP*SSPSAG
Trigger: CCCTGCAGATGGAGAAGATCAAGGCTCGTTTGAAGG...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAATTTGCTGGTGACATaGCAAGCAGGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRNLLVT*QAGLHR
Trigger: CCTATGAAGGCCTGCTTGTCATGTCACCAGCAAATT...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR TCA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCACACTGTTTAGCACCTaGACCACATCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGTLFST*TTSLPK
Trigger: TTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGT...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GGACAAAGCTGGCTCCAAATCCTGCAATTTCCTCTTACTAGCTGTTTAACTCTGAAGTCAGGGAGCCTCTaGAGGCCCAGAGTCATGCGC +
Preference number: 4 (lower is better)
Translates to: GQSWLQILQFPLTSCLTLKSGSL*RPRVMR
Trigger: GCGCATGACTCTGGGCCTGCAGAGGCTCCCTGACTT...CAGAGTTAAACAGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGCTTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGACTAGGCCTTAGGAAGTaGGGTTTTGAGCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: GVASSYPELRLQKSSDPRLGLRK*GFEHFL
Trigger: TAGAAAGTGCTCAAAACCCCACTTCCTAAGGCCTAG...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR CCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTGTAATCTCAGCAATTTaGAAGACAGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAVISAI*KTEAGG
Trigger: TCCTCCTGCCTCTGTCTTCCAAATTGCTGAGATTAC...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR CCA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCAGAGCAAGGGATGAATaGAAGGAAAGTCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: RLQASGTRDRESYLSLLPRARDE*KESPTH
Trigger: GTGGGTGGGACTTTCCTTCCATTCATCCCTTGCTCT...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp TGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAACTTGCATAGGTACCTaGCACAGAGTAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: WVLYLKQDMGLPCPSDPTTCIGT*HRVGAK
Trigger: TTTAGCACCTACTCTGTGCCAGGTACCTATGCAAGT...TGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGTGTTTTCCATCACATTaGTGTCAGCGTGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWCFPSH*CQRGSV
Trigger: GACTGATCCACGCTGACATCAATGTGATGGAAAACA...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTATAGAGAATCATATCTaGGCCTTTTGCCCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAIENHI*AFCPSL
Trigger: AAGGGAAGGGCAAAAGGCTCAGATATGATTCTCTAT...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGCCTGCAATATACCATTaGGCATGTGCCAGAGTAATG +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRPAIYH*ACARVM
Trigger: CATTACTCTGGCACATGCTCAATGGTATATTGCAGG...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCCAAGAGAGCAAGGGATaGATGGAAGGAAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLQESKG*MEGKSH
Trigger: GTGGGACTTTCCTTCCATTCATCCCTTGCTCTCTTG...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGTGGCCTTTATATCCCTaGATCAGTCATTTGACACCC +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWWPLYP*ISHLTP
Trigger: GGGTGTCAAATGACTGATTCAGGGATATAAAGGCCA...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGGGCTTATACTCATCATaGAGCCTCCTTGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRGLYSS*SLLVDS
Trigger: AGAGTCTACAAGGAGGCTGCATGATGAGTATAAGCC...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGTTGATCTTCTCCATCTaGAGGGTCTTGTTCCTGATC +
Preference number: 4 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRLIFSI*RVLFLI
Trigger: GATCAGGAACAAGACCCTGCAGATGGAGAAGATCAA...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGGCTGGCTCCAAATCCTaGAATTTCCTCTTACTAGCT +
Preference number: 4 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRAGSKS*NFLLLA
Trigger: AGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGC...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCATGCACCCAGCCTGTTaGAGAATCCAACATGAAGAC +
Preference number: 4 (lower is better)
Translates to: RLQASGTRDRESYLSLLPMHPAC*RIQHED
Trigger: GTCTTCATGTTGGATTCTCCAACAGGCTGGGTGCAT...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp AAATACTGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACATGCACCCAGCCTGTTaGAGAATCCAACATGAAGAC +
Preference number: 4 (lower is better)
Translates to: KYWVLYLKQDMGLPCPSDMHPAC*RIQHED
Trigger: GTCTTCATGTTGGATTCTCCAACAGGCTGGGTGCAT...GTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGACAAAGCTGGCTCCAAATCCTGCAATTTCCTCTTACTAGCTGTTTAACTCTGTCCACAGGACAGGAGTaGCCAGCAGCTATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQSWLQILQFPLTSCLTLSTGQE*PAAILS
Trigger: GCTCAGGATAGCTGCTGGCCACTCCTGTCCTGTGGA...CAGAGTTAAACAGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGCTTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGCCTTACCAGGAAACCTaGCTTTGGTGGAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GWARVVSHQDINDSGQGEPYQET*LWWKGE
Trigger: CTCTCCTTTCCACCAAAGCCAGGTTTCCTGGTAAGG...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGACTTGCATAGGTACCTaGCACAGAGTAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWTCIGT*HRVGAK
Trigger: TTTAGCACCTACTCTGTGCCAGGTACCTATGCAAGT...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
3UTR CAA 72 bp CAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTaGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATG +
Preference number: 4 (lower is better)
Translates to: QPCLPNDYEKEG*SKLPLGLKDEM
Trigger: CATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTAAGACTATTGTCCCTTaGGAACCTAAGGCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAKTIVP*EPKAKV
Trigger: TACTTTTGCCTTAGGTTCTCAAGGGACAATAGTCTT...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCGTTGGTCTGGCTCACTaGTTTCACTGTGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: RLQASGTRDRESYLSLLPVGLAH*FHCGNL
Trigger: AAGATTTCCACAGTGAAATCAGTGAGCCAGACCAAC...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AAATACTGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTGCAATATACCATTaGGCATGTGCCAGAGTAATG +
Preference number: 4 (lower is better)
Translates to: KYWVLYLKQDMGLPCPSDPAIYH*ACARVM
Trigger: CATTACTCTGGCACATGCTCAATGGTATATTGCAGG...GTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCGCAGGGTCTTGTTCCTaGAATTTGCAAAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLQASGTRDRESYLSLLPAGSCS*NLQKAG
Trigger: TCCTGCTTTTTGCAAATTGCAGGAACAAGACCCTGC...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR GCA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGTTGTATTCCTTCAGGTaGCTTTCCTCTGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRLYSFR*LSSDSS
Trigger: ACTTGAGTCAGAGGAAAGGCACCTGAAGGAATACAA...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGAGAAGGTCCATCTCCTaGTTGTATTCCTTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRRRSIS*LYSFRC
Trigger: GCACCTGAAGGAATACAAGCAGGAGATGGACCTTCT...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTGATTTCAGTTCCAAAGTCAGGGAGCCTCTaGAGGCCCAGAGTCATGCGC +
Preference number: 4 (lower is better)
Translates to: AFISLNQSFDTQFLISVPKSGSL*RPRVMR
Trigger: GCGCATGACTCTGGGCCTGCAGAGGCTCCCTGACTT...TGGAACTGAAATCAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGGTCTGCCGAGTATCCTaGTTCCTAGCCACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: THCLAPEPHLFLNQKSQEVCRVS*FLATWS
Trigger: GCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGAC...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR GCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGATTCATAGGTGGGGGCTaGTGCCTGAAGGTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: THSLVPKNFSICGRQKWRFIGGG*CLKVAV
Trigger: GACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAA...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR GCA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCAAGAGGGCATATAGGTaGATTCCGGTGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: RLQASGTRDRESYLSLLPKRAYR*IPVNLL
Trigger: CAGCAAATTCACCGGAATGCACCTATATGCCCTCTT...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTATACCATTGAGCATGTaGCAGAGTAATGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAIPLSM*QSNGSE
Trigger: TTCAGAACCATTACTCTGGCACATGCTCAATGGTAT...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGACACATGTTCTTTCAGTaGCTTATACTCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: GVASSYPELRLQKSSDPRHMFFQ*LILIMQ
Trigger: CTGCATGATGAGTATAAGCCACTGAAAGAACATGTG...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp AAGCTAAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTTGTGCAGGCCTTCATAGGTaGGGGCTGCTGCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KLKNYSHASQMIMKRRACAGLHR*GLLPEG
Trigger: ACCTTCAGGCAGCAGCCCCCACCTATGAAGGCCTGC...ACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CCA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: GWARVVSHQDINDSGQGEGLKCE*ERRDHQ
Trigger: CTGATGATCCCTTCTCTCCCACTCACATTTCAACCC...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GCAAAAGTACAAGGAGGGGAAATACTGGGTCCTTTACCTGAAACAAGATATGGGGAAACCTGGCTTTGGTaGAAAGGAGAGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AKVQGGEILGPLPETRYGETWLW*KGELWG
Trigger: GCCCCACAGCTCTCCTTTCCACCAAAGCCAGGTTTC...CCCATATCTTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTTGTACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GCAAAAGTACAAGGAGGGGAAATACTGGGTCCTTTACCTGAAACAAGATATGGGCAGGTGCCTTTCCTCTaGCTCAAGTGCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: AKVQGGEILGPLPETRYGQVPFL*LKCLKL
Trigger: GAGTTTGAGGCACTTGAGTCAGAGGAAAGGCACCTG...CCCATATCTTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTTGTACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCAAGAGGGCATATAGGTaGATTCCGGTGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLKRAYR*IPVNLL
Trigger: CAGCAAATTCACCGGAATGCACCTATATGCCCTCTT...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GGAGTGGCCAGCAGCTATCCTGAGCTGAGGCTCCAGAAGAGTTCAGATCCAAGATTGCACATGATTTCTTaGTCATCTGCCATACTTTTC +
Preference number: 4 (lower is better)
Translates to: GVASSYPELRLQKSSDPRLHMIS*SSAILF
Trigger: GAAAAGTATGGCAGATGAGCAAGAAATCATGTGCAA...TCTTGGATCTGAACTCTTCTGGAGCCTCAGCTCAGGATAGCTGCTGGCCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCAAGGAGGGGAAATACTaGGTCCTTTACCTGAAACAA +
Preference number: 4 (lower is better)
Translates to: RLQASGTRDRESYLSLLPKEGKY*VLYLKQ
Trigger: TTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTT...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGCAGGAAACCTGGCTTTaGTGGAAAGGAGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: THCLAPEPHLFLNQKSQEQETWL*WKGELW
Trigger: CCACAGCTCTCCTTTCCACCAAAGCCAGGTTTCCTG...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGACACTGTTTAGCACCTaGACCACATCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: GWARVVSHQDINDSGQGETLFST*TTSLPK
Trigger: TTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGT...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGACAAAGCTGGCTCCAAATCCTGCAATTTCCTCTTACTAGCTGTTTAACTCTGACTGGGTCCTTTACCTaGAACAAGATATGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQSWLQILQFPLTSCLTLTGSFT*NKIWAS
Trigger: GGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGT...CAGAGTTAAACAGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGCTTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCTTGGAGAATCCAACATaGAGACTATTGTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLLENPT*RLLSLE
Trigger: CTCAAGGGACAATAGTCTTCATGTTGGATTCTCCAA...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGTCCCTTATCTTCGAGTaGCCTTACCAGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: THCLAPEPHLFLNQKSQESLIFE*PYQETW
Trigger: CCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGA...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGGTCTGCCGAGTATCCTaGTTCCTAGCCACTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWVCRVS*FLATWS
Trigger: GCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGAC...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR GCA 90 bp TGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAAAAGAATTACAGCCATaGCTCCCAAATGATTATGAA +
Preference number: 4 (lower is better)
Translates to: WVLYLKQDMGLPCPSDPTKELQP*LPNDYE
Trigger: TTCATAATCATTTGGGAGGCATGGCTGTAATTCTTT...TGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGGGAGGAAAGGCCACCTaGACAATCCACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWGGKAT*TIHRTG
Trigger: TCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCC...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATGGGTTGAAATGTGAGTaGGAGAGAAGGGATCATCAG +
Preference number: 4 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYGLKCE*ERRDHQ
Trigger: CTGATGATCCCTTCTCTCCCACTCACATTTCAACCC...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGAACACAGATGTCAGCCTaGGGGCACTCTCAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: THSLVPKNFSICGRQKWRTQMSA*GHSQPK
Trigger: CTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGT...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp AAATACTGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACTTTCTTTATTCATCCTaGTTCCGTTTCGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KYWVLYLKQDMGLPCPSDFLYSS*FRFGFL
Trigger: CAAAAAGCCGAAACGGAAGCAGGATGAATAAAGAAA...GTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCATACCATTGAGCATGTaGCAGAGTAATGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLIPLSM*QSNGSE
Trigger: TTCAGAACCATTACTCTGGCACATGCTCAATGGTAT...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACACGGAGTTCCTCCACATaGGCCATCTTCTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GGMNKSKQELPRKVNDITRSSST*AIFSCS
Trigger: GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCG...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCCACATGTTCTTTCAGTaGCTTATACTCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLHMFFQ*LILIMQ
Trigger: CTGCATGATGAGTATAAGCCACTGAAAGAACATGTG...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACAGAAACCTGGCTTTGGTaGAAAGGAGAGCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGMNKSKQELPRKVNDITETWLW*KGELWG
Trigger: GCCCCACAGCTCTCCTTTCCACCAAAGCCAGGTTTC...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGAGAAATAGGAGCAAAGTaGGAGAGGGGTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: THSLVPKNFSICGRQKWREIGAK*ERGCAS
Trigger: GGAAGCACAACCCCTCTCTCACTTTGCTCCTATTTC...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATACACTGTTTAGCACCTaGACCACATCTCTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYTLFST*TTSLPK
Trigger: TTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGT...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATATAGAGAATCATATCTaGGCCTTTTGCCCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYIENHI*AFCPSL
Trigger: AAGGGAAGGGCAAAAGGCTCAGATATGATTCTCTAT...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGAACTGGGTCCTTTACCTaGAACAAGATATGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: THSLVPKNFSICGRQKWRTGSFT*NKIWAS
Trigger: GGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGT...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AAGCTAAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTTGTCAAGAGAGCAAGGGATaGATGGAAGGAAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLKNYSHASQMIMKRRACQESKG*MEGKSH
Trigger: GTGGGACTTTCCTTCCATTCATCCCTTGCTCTCTTG...ACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGCAAGAGAGCAAGGGATaGATGGAAGGAAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWQESKG*MEGKSH
Trigger: GTGGGACTTTCCTTCCATTCATCCCTTGCTCTCTTG...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGACAAAGCTGGCTCCAAATCCTGCAATTTCCTCTTACTAGCTGTTTAACTCTGTGGCCTTTATATCCCTaGATCAGTCATTTGACACCC +
Preference number: 4 (lower is better)
Translates to: GQSWLQILQFPLTSCLTLWPLYP*ISHLTP
Trigger: GGGTGTCAAATGACTGATTCAGGGATATAAAGGCCA...CAGAGTTAAACAGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGCTTTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGAGAGACTTCGTGGGGTTaGGCAAGGGTTGTTTCACAT +
Preference number: 4 (lower is better)
Translates to: THSLVPKNFSICGRQKWRETSWG*ARVVSH
Trigger: ATGTGAAACAACCCTTGCCCAACCCCACGAAGTCTC...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp AAGCTAAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTTGTAGAGCAAGGGATGAATaGAAGGAAAGTCCCACCCAC +
Preference number: 4 (lower is better)
Translates to: KLKNYSHASQMIMKRRACRARDE*KESPTH
Trigger: GTGGGTGGGACTTTCCTTCCATTCATCCCTTGCTCT...ACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGCAGGTGCCTTTCCTCTaGCTCAAGTGCCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRQVPFL*LKCLKL
Trigger: GAGTTTGAGGCACTTGAGTCAGAGGAAAGGCACCTG...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACAGAAATAGGAGCAAAGTaGGAGAGGGGTTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GGMNKSKQELPRKVNDITEIGAK*ERGCAS
Trigger: GGAAGCACAACCCCTCTCTCACTTTGCTCCTATTTC...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACATCCCTTATCTTCGAGTaGCCTTACCAGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: GGMNKSKQELPRKVNDITSLIFE*PYQETW
Trigger: CCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGA...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGTTGTATTCCTTCAGGTaGCTTTCCTCTGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: THCLAPEPHLFLNQKSQELYSFR*LSSDSS
Trigger: ACTTGAGTCAGAGGAAAGGCACCTGAAGGAATACAA...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp AGTCAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTCTGAAGGTGGCCGTCTaGCGAGTATCCTGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: SQIQSFILSNLHRYLAQSLKVAV*RVSCFL
Trigger: TAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAG...ACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374839.8
CDS-3UTR GCA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGAAAGAATTACAGCCATaGCTCCCAAATGATTATGAA +
Preference number: 4 (lower is better)
Translates to: GWARVVSHQDINDSGQGEKELQP*LPNDYE
Trigger: TTCATAATCATTTGGGAGGCATGGCTGTAATTCTTT...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGAAAGAATTACAGCCATaGCTCCCAAATGATTATGAA +
Preference number: 4 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRKELQP*LPNDYE
Trigger: TTCATAATCATTTGGGAGGCATGGCTGTAATTCTTT...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTGATTTCAGTTCCATGTTTTCCATCACATTaGTGTCAGCGTGGATCAGTC +
Preference number: 4 (lower is better)
Translates to: AFISLNQSFDTQFLISVPCFPSH*CQRGSV
Trigger: GACTGATCCACGCTGACATCAATGTGATGGAAAACA...TGGAACTGAAATCAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTGATTTCAGTTCCAGTTGGTCTGGCTCACTaGTTTCACTGTGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: AFISLNQSFDTQFLISVPVGLAH*FHCGNL
Trigger: AAGATTTCCACAGTGAAATCAGTGAGCCAGACCAAC...TGGAACTGAAATCAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGCCTGCAATATACCATTaGGCATGTGCCAGAGTAATG +
Preference number: 4 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWPAIYH*ACARVM
Trigger: CATTACTCTGGCACATGCTCAATGGTATATTGCAGG...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGATCATCAAGCCATTCTaGAAGGGAGAAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: THCLAPEPHLFLNQKSQEIIKPF*KGERFS
Trigger: AGAAAACCTTTCTCCCTTTCAGAATGGCTTGATGAT...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp AGTCAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTCAGGAAACCTGGCTTTaGTGGAAAGGAGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQIQSFILSNLHRYLAQSQETWL*WKGELW
Trigger: CCACAGCTCTCCTTTCCACCAAAGCCAGGTTTCCTG...ACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGAATTTGCTGGTGACATaGCAAGCAGGCCTTCATAGG +
Preference number: 4 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRNLLVT*QAGLHR
Trigger: CCTATGAAGGCCTGCTTGTCATGTCACCAGCAAATT...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374839.8
CDS-3UTR TCA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGCCTTCATGTGTAAAGTaGTTGGCATTTACTCAAATC +
Preference number: 4 (lower is better)
Translates to: THCLAPEPHLFLNQKSQEPSCVK*LAFTQI
Trigger: GATTTGAGTAAATGCCAATCACTTTACACATGAAGG...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGCCTGAATCAGTCATTTaGCACCCAGTTCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWPESVI*HPVLDF
Trigger: GAAATCAAGAACTGGGTGTCAAATGACTGATTCAGG...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GGACAAAGCTGGCTCCAAATCCTGCAATTTCCTCTTACTAGCTGTTTAACTCTGAATTATTGTCCTTGGTaGCTGGCTTTCTCATTTGTA +
Preference number: 4 (lower is better)
Translates to: GQSWLQILQFPLTSCLTLNYCPW*LAFSFV
Trigger: TACAAATGAGAAAGCCAGGCACCAAGGACAATAATT...CAGAGTTAAACAGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGCTTTGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACATTGGAGAATCCAACATaGAGACTATTGTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: GGMNKSKQELPRKVNDITLENPT*RLLSLE
Trigger: CTCAAGGGACAATAGTCTTCATGTTGGATTCTCCAA...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGGTTGGTCTGGCTCACTaGTTTCACTGTGGAAATCTT +
Preference number: 4 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRVGLAH*FHCGNL
Trigger: AAGATTTCCACAGTGAAATCAGTGAGCCAGACCAAC...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGGGCTTATACTCATCATaGAGCCTCCTTGTAGACTCT +
Preference number: 4 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRGLYSS*SLLVDS
Trigger: AGAGTCTACAAGGAGGCTGCATGATGAGTATAAGCC...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGACACATGTTCTTTCAGTaGCTTATACTCATCATGCAG +
Preference number: 4 (lower is better)
Translates to: THSLVPKNFSICGRQKWRHMFFQ*LILIMQ
Trigger: CTGCATGATGAGTATAAGCCACTGAAAGAACATGTG...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
3UTR CAA 72 bp GACAGATTAGTGTACAGGATATTATTTAGAGAGCCCTaGGCCTTTATATCCCTGAATCAGTCATTTGACACC +
Preference number: 4 (lower is better)
Translates to: DRLVYRILFREP*AFISLNQSFDT
Trigger: GGTGTCAAATGACTGATTCAGGGATATAAAGGCCAAGGGCTCTCTAAATAATATCCTGTACACTAATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACAATCATCAAGCCATTCTaGAAGGGAGAAAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GGMNKSKQELPRKVNDITIIKPF*KGERFS
Trigger: AGAAAACCTTTCTCCCTTTCAGAATGGCTTGATGAT...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGATTTCTTTATTCATCCTaGTTCCGTTTCGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: THSLVPKNFSICGRQKWRFLYSS*FRFGFL
Trigger: CAAAAAGCCGAAACGGAAGCAGGATGAATAAAGAAA...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GAGAGGTTTTATTTAGCTGTTGAATTCCCTGACAAGCACAGAGACAGATTAGTGGATTTCTTGCTCATCTaGCATACTTTTCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: ERFYLAVEFPDKHRDRLVDFLLI*HTFHCQ
Trigger: TTGACAGTGAAAAGTATGGCAGATGAGCAAGAAATC...CACTAATCTGTCTCTGTGCTTGTCAGGGAATTCAACAGCTAAATAAAACCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp AAGCTAAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTTGTGATTTCTTGCTCATCTaGCATACTTTTCACTGTCAA +
Preference number: 4 (lower is better)
Translates to: KLKNYSHASQMIMKRRACDFLLI*HTFHCQ
Trigger: TTGACAGTGAAAAGTATGGCAGATGAGCAAGAAATC...ACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp GCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTGATTTCAGTTCCATTGCACATGATTTCTTaGTCATCTGCCATACTTTTC +
Preference number: 4 (lower is better)
Translates to: AFISLNQSFDTQFLISVPLHMIS*SSAILF
Trigger: GAAAAGTATGGCAGATGAGCAAGAAATCATGTGCAA...TGGAACTGAAATCAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGAAGACTATTGTCCCTTaGGAACCTAAGGCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRKTIVP*EPKAKV
Trigger: TACTTTTGCCTTAGGTTCTCAAGGGACAATAGTCTT...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACACCTTCATGTGTAAAGTaGTTGGCATTTACTCAAATC +
Preference number: 4 (lower is better)
Translates to: GGMNKSKQELPRKVNDITPSCVK*LAFTQI
Trigger: GATTTGAGTAAATGCCAATCACTTTACACATGAAGG...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR TCA 90 bp AGTCAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTCCTGAATCAGTCATTTaGCACCCAGTTCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: SQIQSFILSNLHRYLAQSPESVI*HPVLDF
Trigger: GAAATCAAGAACTGGGTGTCAAATGACTGATTCAGG...ACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR GCA 90 bp AGTCAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTATACCATTGAGCATGTaGCAGAGTAATGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQIQSFILSNLHRYLAQSIPLSM*QSNGSE
Trigger: TTCAGAACCATTACTCTGGCACATGCTCAATGGTAT...ACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTGACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS CCA 90 bp TGCCTGAAGGTGGCCGTCTGCCGAGTATCCTGCTTCCTAGCCACTTaGAGCTGTTGGGCGGCAGCGGCTGCAGCGGCCAGGGACTCAGGG +
Preference number: 5 (lower is better)
Translates to: CLKVAVCRVSCFLAT*SCWAAAAAAARDSG
Trigger: CCCTGAGTCCCTGGCCGCTGCAGCCGCTGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS GCA 90 bp ATAGGTGGGGGCTGCTGCCTGAAGGTGGCCGTCTGCCGAGTATCCTaGTTCCTAGCCACTTGGAGCTGTTGGGCGGCAGCGGCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: IGGGCCLKVAVCRVS*FLATWSCWAAAAAA
Trigger: CGCTGCAGCCGCTGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS GCA 90 bp AAGCAGGCCTTCATAGGTGGGGGCTGCTGCCTGAAGGTGGCCGTCTaGCGAGTATCCTGCTTCCTAGCCACTTGGAGCTGTTGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: KQAFIGGGCCLKVAV*RVSCFLATWSCWAA
Trigger: TGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAAGGCCTGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000476032.1
ENST00000488831.5
ENST00000492653.5
CDS GCA 90 bp AGACACAATGTAGCCACCTCCTCCGGGCTTGGGGCTATGAGCCTGTaGGGTAGGGGCTTGGAGAGGCCTGGGAGCTGTAGTCCGGAGCTT +
Preference number: 5 (lower is better)
Translates to: RHNVATSSGLGAMSL*GRGLERPGSCSPEL
Trigger: AAGCTCCGGACTACAGCTCCCAGGCCTCTCCAAGCCCCTACCGCACAGGCTCATAGCCCCAAGCCCGGAGGAGGTGGCTACATTGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447788.6
ENST00000488608.5
CDS GCA 90 bp TCACTTACCTTCATAGGTGGGGGCTGCTGCCTGAAGGTGGCCGTCTaGCGAGTATCCTGCTTCCTAGCCACTTGGAGCTGTTGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SLTFIGGGCCLKVAV*RVSCFLATWSCWAA
Trigger: TGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAAGGTAAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS GCA 90 bp CCTCCACAACCATTACCCAGCTCACTTACCTTCATAGGTGGGGGCTaGTGCCTGAAGGTGGCCGTCTGCCGAGTATCCTGCTTCCTAGCC +
Preference number: 5 (lower is better)
Translates to: PPQPLPSSLTFIGGG*CLKVAVCRVSCFLA
Trigger: GGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAAGGTAAGTGAGCTGGGTAATGGTTGTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS GCA 90 bp CCACAACCATTACCCAGCTCACTTACCTTCATAGGTGGGGGCTGCTaGCTGAAGGTGGCCGTCTGCCGAGTATCCTGCTTCCTAGCCACT +
Preference number: 5 (lower is better)
Translates to: PQPLPSSLTFIGGGC*LKVAVCRVSCFLAT
Trigger: AGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAAGGTAAGTGAGCTGGGTAATGGTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS-3UTR CAA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCAGTAATCTCAGCAATTaGGAAGACAGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPSNLSN*EDRGRR
Trigger: CCTCCTGCCTCTGTCTTCCAAATTGCTGAGATTACT...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR CAA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTTTCCGTTTCGGCTTTTaGGGGTTCCGGGACCGACTC +
Preference number: 5 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAFRFGF*GFRDRL
Trigger: GAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAA...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCGGAGACTTCGTGGGGTaGGGCAAGGGTTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGGDFVG*GKGCFT
Trigger: TGTGAAACAACCCTTGCCCAACCCCACGAAGTCTCC...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS CCA 90 bp TTTGCTTCCTCCACAACCATTACCCAGCTCACTTACCTTCATAGGTaGGGGCTGCTGCCTGAAGGTGGCCGTCTGCCGAGTATCCTGCTT +
Preference number: 5 (lower is better)
Translates to: FASSTTITQLTYLHR*GLLPEGGRLPSILL
Trigger: AAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAAGGTAAGTGAGCTGGGTAATGGTTGTGGAGGAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS-3UTR CAA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCTTGTTCCTGCAATTaGCAAAAAGCAGGAAACAGG +
Preference number: 5 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPSCSCN*QKAGNR
Trigger: CCTGTTTCCTGCTTTTTGCAAATTGCAGGAACAAGA...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR CAA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCGTAGACTCTAGCAGCTaGTTTAGGTCATTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPVDSSS*FRSFSD
Trigger: ATCTGAGAATGACCTAAACAAGCTGCTAGAGTCTAC...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCCTGCTTCCTAGCCACTaGGAGCTGTTGGGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLLLPSH*ELLGGS
Trigger: GCTGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCAG...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CAA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCGACCGACTCTTGGCCTaGCAAAGAGGGCATATAGGT +
Preference number: 5 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGDRLLA*QRGHIG
Trigger: ACCTATATGCCCTCTTTGCAAGGCCAAGAGTCGGTC...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp CCTTCCCTTAGCTCCAAACAAGGGCAGGGGTTGAAATGTGAGTGGGAGAGAAGGTTCCGTTTCGGCTTTTaGGGGTTCCGGGACCGACTC +
Preference number: 5 (lower is better)
Translates to: PSLSSKQGQGLKCEWERRFRFGF*GFRDRL
Trigger: GAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAA...CCTTCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTTGGAGCTAAGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp CAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTTGGGGAAAGGTTCATaGATCTTAAGATCCCAAGAC +
Preference number: 5 (lower is better)
Translates to: QMSAWGHSQPKEAPTAEPLGKGS*ILRSQD
Trigger: GTCTTGGGATCTTAAGATCAATGAACCTTTCCCCAA...GGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp TGGGGGCACTCTCAGCCTAAGGAAGCCCCTACAGCCGAGCCCTCAGCCCTAATGCCCTGCAATATACCATaGAGCATGTGCCAGAGTAAT +
Preference number: 5 (lower is better)
Translates to: WGHSQPKEAPTAEPSALMPCNIP*SMCQSN
Trigger: ATTACTCTGGCACATGCTCAATGGTATATTGCAGGG...CATTAGGGCTGAGGGCTCGGCTGTAGGGGCTTCCTTAGGCTGAGAGTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GCAAAAGTACAAGGAGGGGAAATACTGGGTCCTTTACCTGAAACAAGATATGGGAGCCACTTGGAGCTGTaGGGCGGCAGCGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AKVQGGEILGPLPETRYGSHLEL*GGSGCS
Trigger: GCTGCAGCCGCTGCCGCCCAACAGCTCCAAGTGGCT...CCCATATCTTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTTGTACTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CAA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCTTCCGGGACCGACTCTaGGCCTTGCAAAGAGGGCAT +
Preference number: 5 (lower is better)
Translates to: RLQASGTRDRESYLSLLPFRDRL*ALQRGH
Trigger: ATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGAA...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATCTGCTTCCTAGCCACTaGGAGCTGTTGGGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYLLPSH*ELLGGS
Trigger: GCTGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCAG...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000374839.8
CDS-3UTR CAA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCTTCCGGGACCGACTCTaGGCCTTGCAAAGAGGGCAT +
Preference number: 5 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLFRDRL*ALQRGH
Trigger: ATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGAA...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AAATACTGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACGGAGACTTCGTGGGGTaGGGCAAGGGTTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: KYWVLYLKQDMGLPCPSDGDFVG*GKGCFT
Trigger: TGTGAAACAACCCTTGCCCAACCCCACGAAGTCTCC...GTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS GCA 90 bp TCCTCCACATGGGCCATCTTCTCCTGTAGCAGAAGGTCCATCTCCTaGTTGTATTCCTTCAGGTGCCTTTCCTCTGACTCAAGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: SSTWAIFSCSRRSIS*LYSFRCLSSDSSAS
Trigger: TGAGGCACTTGAGTCAGAGGAAAGGCACCTGAAGGAATACAAGCAGGAGATGGACCTTCTGCTACAGGAGAAGATGGCCCATGTGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS CCA 90 bp GTGAGACCTTATATCTTCACGTCGCTCCTTCTAGGCCTTAGGAAGTaGGGTTTTGAGCACTTTCTAGGTCGTAGGCCTGCTGGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: VRPYIFTSLLLGLRK*GFEHFLGRRPAGLS
Trigger: GCTCAGACCAGCAGGCCTACGACCTAGAAAGTGCTCAAAACCCCACTTCCTAAGGCCTAGAAGGAGCGACGTGAAGATATAAGGTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR CAA 90 bp AAATACTGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACGACCGACTCTTGGCCTaGCAAAGAGGGCATATAGGT +
Preference number: 5 (lower is better)
Translates to: KYWVLYLKQDMGLPCPSDDRLLA*QRGHIG
Trigger: ACCTATATGCCCTCTTTGCAAGGCCAAGAGTCGGTC...GTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCAGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS TCA 90 bp GCAAAGAGGGCATATAGGTGCATTCCGGTGAATTTGCTGGTGACATaGCAAGCAGGCCTTCATAGGTGGGGGCTGCTGCTTCTCAAAGTA +
Preference number: 5 (lower is better)
Translates to: AKRAYRCIPVNLLVT*QAGLHRWGLLLLKV
Trigger: TACTTTGAGAAGCAGCAGCCCCCACCTATGAAGGCCTGCTTGTCATGTCACCAGCAAATTCACCGGAATGCACCTATATGCCCTCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488406.1
CDS-3UTR CAA 90 bp GTCAGCCCCCATCCCCATCCCTTATCTTCGAGTGACCTTACCAGGAAACCTGGCTTGGGGAAAGGTTCATaGATCTTAAGATCCCAAGAC +
Preference number: 5 (lower is better)
Translates to: VSPHPHPLSSSDLTRKPGLGKGS*ILRSQD
Trigger: GTCTTGGGATCTTAAGATCAATGAACCTTTCCCCAA...GCCAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGCTGATGCCTTTTCTTTaGGGAGGAAAGGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRLMPFL*GGKATC
Trigger: GCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCATCAG...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS TCA 90 bp TTTCCTCTGACTCAAGTGCCTCAAACTCAGCCTTCAAACGAGCCTTaGTCTTCTCCATCTGCAGGGTCTTGTTCCTTCACGTCGCTCCTT +
Preference number: 5 (lower is better)
Translates to: FPLTQVPQTQPSNEP*SSPSAGSCSFTSLL
Trigger: AAGGAGCGACGTGAAGGAACAAGACCCTGCAGATGGAGAAGATCAAGGCTCGTTTGAAGGCTGAGTTTGAGGCACTTGAGTCAGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488831.5
CDS-3UTR CAA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCAGGTCCATCTCCTGCTaGTATTCCTTCAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLRSISC*YSFRCL
Trigger: AAGGCACCTGAAGGAATACAAGCAGGAGATGGACCT...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp CAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAGGAGCCACTTGGAGCTGTaGGGCGGCAGCGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QIQSFILSNLHRYLAQSRSHLEL*GGSGCS
Trigger: GCTGCAGCCGCTGCCGCCCAACAGCTCCAAGTGGCT...CCTACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374839.8
CDS-3UTR CAA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGAAACAAGGGCAGGGGTaGAAATGTGAGTGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GWARVVSHQDINDSGQGEKQGQG*KCEWER
Trigger: TCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTT...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp TGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACATTGGGGAAAGGTTCATaGATCTTAAGATCCCAAGAC +
Preference number: 5 (lower is better)
Translates to: WVLYLKQDMGLPCPSDPTLGKGS*ILRSQD
Trigger: GTCTTGGGATCTTAAGATCAATGAACCTTTCCCCAA...TGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS TCA 90 bp CAGAAGGTCCATCTCCTGCTTGTATTCCTTCAGGTGCCTTTCCTCTaGCTCAAGTGCCTCAAACTCAGCCTTCAAACGAGCCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: QKVHLLLVFLQVPFL*LKCLKLSLQTSLDL
Trigger: AAGATCAAGGCTCGTTTGAAGGCTGAGTTTGAGGCACTTGAGTCAGAGGAAAGGCACCTGAAGGAATACAAGCAGGAGATGGACCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS-3UTR CAA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCGTGTTTTCCATCACATaGATGTCAGCGTGGATCAGT +
Preference number: 5 (lower is better)
Translates to: RLQASGTRDRESYLSLLPVFSIT*MSAWIS
Trigger: ACTGATCCACGCTGACATCAATGTGATGGAAAACAC...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GTTCTGAACAAAAGCCAACACAGATGTCAGCCTGGGGGCACTCTCAGCCTAAGGGTAGACTCTAGCAGCTaGTTTAGGTCATTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: VLNKSQHRCQPGGTLSLRVDSSS*FRSFSD
Trigger: ATCTGAGAATGACCTAAACAAGCTGCTAGAGTCTAC...CCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTGTTCAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp TGCCTTTTCTTTTGGGAGGAAAGGCCACCTGCACAATCCACAGGACAGGAGTGGAAAGTGAGAGAGGGGTaGTGCTTCCATCACATTAAA +
Preference number: 5 (lower is better)
Translates to: CLFFWEERPPAQSTGQEWKVREG*CFHHIK
Trigger: TTTAATGTGATGGAAGCACAACCCCTCTCTCACTTT...CCACTCCTGTCCTGTGGATTGTGCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATCTGATGCCTTTTCTTTaGGGAGGAAAGGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYLMPFL*GGKATC
Trigger: GCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCATCAG...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCTCCATCTGCAGGGTCTaGTTCCTGATCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: RLQASGTRDRESYLSLLPSICRV*FLISLM
Trigger: CATTAAAGAGATCAGGAACAAGACCCTGCAGATGGA...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp TGGGTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACATTATTTAGAGAGCCCTaGGCCTTTATATCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: WVLYLKQDMGLPCPSDPTLFREP*AFISLN
Trigger: ATTCAGGGATATAAAGGCCAAGGGCTCTCTAAATAA...TGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGTCCATCTGCAGGGTCTaGTTCCTGCAATTTGCAAAA +
Preference number: 5 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRSICRV*FLQFAK
Trigger: TTTTGCAAATTGCAGGAACAAGACCCTGCAGATGGA...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR CAA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGTGTTTTCCATCACATaGATGTCAGCGTGGATCAGT +
Preference number: 5 (lower is better)
Translates to: GWARVVSHQDINDSGQGEVFSIT*MSAWIS
Trigger: ACTGATCCACGCTGACATCAATGTGATGGAAAACAC...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GCAAAAGTACAAGGAGGGGAAATACTGGGTCCTTTACCTGAAACAAGATATGGGGACCGACTCTTGGCCTaGCAAAGAGGGCATATAGGT +
Preference number: 5 (lower is better)
Translates to: AKVQGGEILGPLPETRYGDRLLA*QRGHIG
Trigger: ACCTATATGCCCTCTTTGCAAGGCCAAGAGTCGGTC...CCCATATCTTGTTTCAGGTAAAGGACCCAGTATTTCCCCTCCTTGTACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGATTCCGGGACCGACTCTaGGCCTTGCAAAGAGGGCAT +
Preference number: 5 (lower is better)
Translates to: THSLVPKNFSICGRQKWRFRDRL*ALQRGH
Trigger: ATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGAA...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GAGAGGTTTTATTTAGCTGTTGAATTCCCTGACAAGCACAGAGACAGATTAGTGTTCCGTTTCGGCTTTTaGGGGTTCCGGGACCGACTC +
Preference number: 5 (lower is better)
Translates to: ERFYLAVEFPDKHRDRLVFRFGF*GFRDRL
Trigger: GAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAA...CACTAATCTGTCTCTGTGCTTGTCAGGGAATTCAACAGCTAAATAAAACCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AGGCTCCAGGCCTCAGGCACAAGAGATAGAGAATCATATCTGAGCCTTTTGCCCAAAGTGAGAGAGGGGTaGTGCTTCCATCACATTAAA +
Preference number: 5 (lower is better)
Translates to: RLQASGTRDRESYLSLLPKVREG*CFHHIK
Trigger: TTTAATGTGATGGAAGCACAACCCCTCTCTCACTTT...GGGCAAAAGGCTCAGATATGATTCTCTATCTCTTGTGCCTGAGGCCTGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATAAACAAGGGCAGGGGTaGAAATGTGAGTGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYKQGQG*KCEWER
Trigger: TCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTT...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATGCAGGAGATGTAGAGTaGGTCTGGCTCACTGATTTC +
Preference number: 5 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYAGDVE*VWLTDF
Trigger: GAAATCAGTGAGCCAGACCAACTCTACATCTCCTGC...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GGTTGGGCAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGCCCTGCAATATACCATaGAGCATGTGCCAGAGTAAT +
Preference number: 5 (lower is better)
Translates to: GWARVVSHQDINDSGQGEPCNIP*SMCQSN
Trigger: ATTACTCTGGCACATGCTCAATGGTATATTGCAGGG...CTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTGCCCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GAGTGGGAGAGAAGGGATCATCAGACACACTGTTTAGCACCTGAACCACATCTCCCCTGCAATATACCATaGAGCATGTGCCAGAGTAAT +
Preference number: 5 (lower is better)
Translates to: EWERRDHQTHCLAPEPHLPCNIP*SMCQSN
Trigger: ATTACTCTGGCACATGCTCAATGGTATATTGCAGGG...GAGATGTGGTTCAGGTGCTAAACAGTGTGTCTGATGATCCCTTCTCTCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGCTGATGCCTTTTCTTTaGGGAGGAAAGGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: THCLAPEPHLFLNQKSQELMPFL*GGKATC
Trigger: GCAGGTGGCCTTTCCTCCCAAAAGAAAAGGCATCAG...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GTCCTTTACCTGAAACAAGATATGGGCCTCCCCTGCCCCTCAGACCCTACAGCTTTTGACACCCAGTTCTaGATTTCAGTTCCAAAGTTA +
Preference number: 5 (lower is better)
Translates to: VLYLKQDMGLPCPSDPTAFDTQF*ISVPKL
Trigger: TAACTTTGGAACTGAAATCAAGAACTGGGTGTCAAA...AGCTGTAGGGTCTGAGGGGCAGGGGAGGCCCATATCTTGTTTCAGGTAAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS GCA 90 bp ATGCGCAGGGCATCCACATGTTCTTTCAGTGGCTTATACTCATCATaGAGCCTCCTTGTAGACTCTAGCAGCTTGTTTAGGTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: MRRASTCSFSGLYSS*SLLVDSSSLFRSFS
Trigger: TGAGAATGACCTAAACAAGCTGCTAGAGTCTACAAGGAGGCTGCATGATGAGTATAAGCCACTGAAAGAACATGTGGATGCCCTGCGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS-3UTR CAA 90 bp GGACAAAGCTGGCTCCAAATCCTGCAATTTCCTCTTACTAGCTGTTTAACTCTGGCAGGAGATGTAGAGTaGGTCTGGCTCACTGATTTC +
Preference number: 5 (lower is better)
Translates to: GQSWLQILQFPLTSCLTLAGDVE*VWLTDF
Trigger: GAAATCAGTGAGCCAGACCAACTCTACATCTCCTGC...CAGAGTTAAACAGCTAGTAAGAGGAAATTGCAGGATTTGGAGCCAGCTTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp TATGAAAAGGAGGGCTTGTCCAAGCTACCTCTGGGCCTTAAGGATGAGATGAGGGGTAAATTATTGTCCTaGGTGCCTGGCTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: YEKEGLSKLPLGLKDEMRGKLLS*VPGFLI
Trigger: AATGAGAAAGCCAGGCACCAAGGACAATAATTTACC...CCTCATCTCATCCTTAAGGCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS TCA 90 bp TTTCCTCTGACTCAAGTGCCTCAAACTCAGCCTTCAAACGAGCCTTaGTCTTCTCCATCTGCAGGGTCTTGTTCCTGCAATTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: FPLTQVPQTQPSNEP*SSPSAGSCSCNLQK
Trigger: TTTTTGCAAATTGCAGGAACAAGACCCTGCAGATGGAGAAGATCAAGGCTCGTTTGAAGGCTGAGTTTGAGGCACTTGAGTCAGAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000476032.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTTGTCTTGAGCCCAGGAGTTaGAAACCAGCATGGGCAACA +
Preference number: 5 (lower is better)
Translates to: KLKNYSHASQMIMKRRACLEPRS*KPAWAT
Trigger: TGTTGCCCATGCTGGTTTCAAACTCCTGGGCTCAAG...ACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS-3UTR CAA 90 bp AAGCTAAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTTGTTATGAAAAGGAGGGCTaGTCCAAGCTACCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: KLKNYSHASQMIMKRRACYEKEG*SKLPLG
Trigger: GCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA...ACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTGATTTCAGTTCCATATGAAAAGGAGGGCTaGTCCAAGCTACCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: AFISLNQSFDTQFLISVPYEKEG*SKLPLG
Trigger: GCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA...TGGAACTGAAATCAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp ACACACTGTTTAGCACCTGAACCACATCTCTTCCTAAACCAGAAATCCCAAGAGGTGTTTTCCATCACATaGATGTCAGCGTGGATCAGT +
Preference number: 5 (lower is better)
Translates to: THCLAPEPHLFLNQKSQEVFSIT*MSAWIS
Trigger: ACTGATCCACGCTGACATCAATGTGATGGAAAACAC...CTCTTGGGATTTCTGGTTTAGGAAGAGATGTGGTTCAGGTGCTAAACAGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GGTGGAATGAATAAGAGCAAACAAGAGCTACCCAGAAAGGTAAATGACATTACATATGAAAAGGAGGGCTaGTCCAAGCTACCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GGMNKSKQELPRKVNDITYEKEG*SKLPLG
Trigger: GCCCAGAGGTAGCTTGGACAAGCCCTCCTTTTCATA...TGTAATGTCATTTACCTTTCTGGGTAGCTCTTGTTTGCTCTTATTCATTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGGCAGGAGATGTAGAGTaGGTCTGGCTCACTGATTTC +
Preference number: 5 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWAGDVE*VWLTDF
Trigger: GAAATCAGTGAGCCAGACCAACTCTACATCTCCTGC...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS TCA 90 bp CCCAGAAAGCAAAGTGATTTCCCATCAGAAGAGAGCAATAATCAGTaGGTAGACTCAAGTATTCTTGGATGCCATGGAAGATGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PRKQSDFPSEESNNQ*VDSSILGCHGRWEG
Trigger: TCCTTCCCATCTTCCATGGCATCCAAGAATACTTGAGTCTACTCACTGATTATTGCTCTCTTCTGATGGGAAATCACTTTGCTTTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS-3UTR CAA 90 bp CAAGGGTTGTTTCACATCAGGACATCAATGACTCTGGTCAAGGTGAGGGGTTATTTTGCACATGATTTCTaGCTCATCTGCCATACTTTT +
Preference number: 5 (lower is better)
Translates to: QGLFHIRTSMTLVKVRGYFAHDF*LICHTF
Trigger: AAAAGTATGGCAGATGAGCAAGAAATCATGTGCAAA...ATAACCCCTCACCTTGACCAGAGTCATTGATGTCCTGATGTGAAACAACCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGTCCATCTGCAGGGTCTaGTTCCTGATCTCTTTAATG +
Preference number: 5 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWSICRV*FLISLM
Trigger: CATTAAAGAGATCAGGAACAAGACCCTGCAGATGGA...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AAGCTAAAGAATTACAGCCATGCCTCCCAAATGATTATGAAAAGGAGGGCTTGTGTAGACTCTAGCAGCTaGTTTAGGTCATTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: KLKNYSHASQMIMKRRACVDSSS*FRSFSD
Trigger: ATCTGAGAATGACCTAAACAAGCTGCTAGAGTCTAC...ACAAGCCCTCCTTTTCATAATCATTTGGGAGGCATGGCTGTAATTCTTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp GCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTGATTTCAGTTCCAAAAGTGAGAGAGGGGTaGTGCTTCCATCACATTAAA +
Preference number: 5 (lower is better)
Translates to: AFISLNQSFDTQFLISVPKVREG*CFHHIK
Trigger: TTTAATGTGATGGAAGCACAACCCCTCTCTCACTTT...TGGAACTGAAATCAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AGTCAAATACAATCATTTATATTAAGCAACTTGCATAGGTACCTGGCACAGAGTAAACAAGGGCAGGGGTaGAAATGTGAGTGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: SQIQSFILSNLHRYLAQSKQGQG*KCEWER
Trigger: TCTCTCCCACTCACATTTCAACCCCTGCCCTTGTTT...ACTCTGTGCCAGGTACCTATGCAAGTTGCTTAATATAAATGATTGTATTTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS GCA 90 bp TTGTTCCTGATCTCTTTAATGCTTTCCAATTTGCACATGATTTCTTaGTCATCTGCCATACTTTTCACTGTCAATTTCACGTCCCGAGAG +
Preference number: 5 (lower is better)
Translates to: LFLISLMLSNLHMIS*SSAILFTVNFTSRE
Trigger: CTCTCGGGACGTGAAATTGACAGTGAAAAGTATGGCAGATGAGCAAGAAATCATGTGCAAATTGGAAAGCATTAAAGAGATCAGGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374839.8
ENST00000447788.6
ENST00000488608.5
ENST00000492653.5
CDS-3UTR CAA 90 bp ACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGAGATTATTTAGAGAGCCCTaGGCCTTTATATCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: THSLVPKNFSICGRQKWRLFREP*AFISLN
Trigger: ATTCAGGGATATAAAGGCCAAGGGCTCTCTAAATAA...TCTCCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS GCA 90 bp ATAGCTTGCATGCATGTTGTTTGCAATAGCTTGCAAACACAGACATaGATGTGGGCCAATAAAACTTTAACGAAAACAGGGAACAGATTA +
Preference number: 5 (lower is better)
Translates to: IACMHVVCNSLQTQT*MWANKTLTKTGNRL
Trigger: TAATCTGTTCCCTGTTTTCGTTAAAGTTTTATTGGCCCACATGCATGTCTGTGTTTGCAAGCTATTGCAAACAACATGCATGCAAGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS-3UTR CAA 90 bp GCCTTTATATCCCTGAATCAGTCATTTGACACCCAGTTCTTGATTTCAGTTCCATTTGCACATGATTTCTaGCTCATCTGCCATACTTTT +
Preference number: 5 (lower is better)
Translates to: AFISLNQSFDTQFLISVPFAHDF*LICHTF
Trigger: AAAAGTATGGCAGATGAGCAAGAAATCATGTGCAAA...TGGAACTGAAATCAAGAACTGGGTGTCAAATGACTGATTCAGGGATATAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS-3UTR CAA 90 bp AAGACACACAGCCTAGTACCTAAGAATTTTAGTATATGTGGGAGACAGAAGTGGTTTGACACCCAGTTCTaGATTTCAGTTCCAAAGTTA +
Preference number: 5 (lower is better)
Translates to: KTHSLVPKNFSICGRQKWFDTQF*ISVPKL
Trigger: TAACTTTGGAACTGAAATCAAGAACTGGGTGTCAAA...CCACTTCTGTCTCCCACATATACTAAAATTCTTAGGTACTAGGCTGTGTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374839.8
ENST00000447788.6
CDS CCA 90 bp TTCCTCTCCTTTCTTGACTATATAGATATTTGTTCCAAATGCTCCTaGAACCAGCTTTATAATCCTGCTGGTTCCCTCATTTATGATACA +
Preference number: 5 (lower is better)
Translates to: FLSFLDYIDICSKCS*NQLYNPAGSLIYDT
Trigger: TGTATCATAAATGAGGGAACCAGCAGGATTATAAAGCTGGTTCCAGGAGCATTTGGAACAAATATCTATATAGTCAAGAAAGGAGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS TCA 90 bp TTGCATCTAACTTTGCAAATTTGTTTCAGCCTTCCTCTCCTTTCTTaGCTATATAGATATTTGTTCCAAATGCTCCTGGAACCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: LHLTLQICFSLPLLS*LYRYLFQMLLEPAL
Trigger: TAAAGCTGGTTCCAGGAGCATTTGGAACAAATATCTATATAGTCAAGAAAGGAGAGGAAGGCTGAAACAAATTTGCAAAGTTAGATGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS GCA 72 bp GGCTGCTGCCTGAAGGTGGCCGTCTGCCGAGTATCCTaGTTCCTAGCCACTTGGAGCTGTTGGGCGGCAGCG +
Preference number: 6 (lower is better)
Translates to: GCCLKVAVCRVS*FLATWSCWAAA
Trigger: CGCTGCCGCCCAACAGCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS GCA 72 bp GTAGCCACCTCCTCCGGGCTTGGGGCTATGAGCCTGTaGGGTAGGGGCTTGGAGAGGCCTGGGAGCTGTAGT +
Preference number: 6 (lower is better)
Translates to: VATSSGLGAMSL*GRGLERPGSCS
Trigger: ACTACAGCTCCCAGGCCTCTCCAAGCCCCTACCGCACAGGCTCATAGCCCCAAGCCCGGAGGAGGTGGCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447788.6
ENST00000488608.5
CDS GCA 72 bp TTCATAGGTGGGGGCTGCTGCCTGAAGGTGGCCGTCTaGCGAGTATCCTGCTTCCTAGCCACTTGGAGCTGT +
Preference number: 6 (lower is better)
Translates to: FIGGGCCLKVAV*RVSCFLATWSC
Trigger: ACAGCTCCAAGTGGCTAGGAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS GCA 72 bp CCATTACCCAGCTCACTTACCTTCATAGGTGGGGGCTaGTGCCTGAAGGTGGCCGTCTGCCGAGTATCCTGC +
Preference number: 6 (lower is better)
Translates to: PLPSSLTFIGGG*CLKVAVCRVSC
Trigger: GCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAAGGTAAGTGAGCTGGGTAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS GCA 72 bp TTACCCAGCTCACTTACCTTCATAGGTGGGGGCTGCTaGCTGAAGGTGGCCGTCTGCCGAGTATCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LPSSLTFIGGGC*LKVAVCRVSCF
Trigger: GAAGCAGGATACTCGGCAGACGGCCACCTTCAGGCAGCAGCCCCCACCTATGAAGGTAAGTGAGCTGGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CCA 72 bp TGTATGTGGGTCGGAGGGAGGGTATGTTGTAGGGACTaGGGGCAGGTAGCTTACTCCAAGGAAAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CMWVGGRVCCRD*GQVAYSKESFS
Trigger: GGAGAAGCTTTCCTTGGAGTAAGCTACCTGCCCCCAGTCCCTACAACATACCCTCCCTCCGACCCACATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CAA 72 bp TTCCGTTTCGGCTTTTTGGGGTTCCGGGACCGACTCTaGGCCTTGCAAAGAGGGCATATAGGTGCATTCCGG +
Preference number: 6 (lower is better)
Translates to: FRFGFLGFRDRL*ALQRGHIGAFR
Trigger: CCGGAATGCACCTATATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000488406.1
ENST00000488608.5
ENST00000492653.5
CDS TCA 72 bp GCATATAGGTGCATTCCGGTGAATTTGCTGGTGACATaGCAAGCAGGCCTTCATAGGTGGGGGCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: AYRCIPVNLLVT*QAGLHRWGLLL
Trigger: AAGCAGCAGCCCCCACCTATGAAGGCCTGCTTGTCATGTCACCAGCAAATTCACCGGAATGCACCTATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488406.1
CDS GCA 72 bp ACTAGCCTTCCACGGCCCTTCCATGGGAGGATACTTTaGTTCCTCCACAACCATTACCCAGCTCACTTACCT +
Preference number: 6 (lower is better)
Translates to: TSLPRPFHGRIL*FLHNHYPAHLP
Trigger: AGGTAAGTGAGCTGGGTAATGGTTGTGGAGGAAGCAAAGTATCCTCCCATGGAAGGGCCGTGGAAGGCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS GCA 72 bp TCTAACACCTCTGGGAACATGGGGCAACAAAACCTGTaGTGTGTGTGTCCAACACAGCACACCCATGTCACC +
Preference number: 6 (lower is better)
Translates to: SNTSGNMGQQNL*CVCPTQHTHVT
Trigger: GGTGACATGGGTGTGCTGTGTTGGACACACACAGCACAGGTTTTGTTGCCCCATGTTCCCAGAGGTGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CCA 72 bp GTCCCCACACCTTCCCAAGCACAAGGCTATTGTCCCTaGGTACTAGGCCCAATGTCTGATGAGAAGGGTAAT +
Preference number: 6 (lower is better)
Translates to: VPTPSQAQGYCP*VLGPMSDEKGN
Trigger: ATTACCCTTCTCATCAGACATTGGGCCTAGTACCCAGGGACAATAGCCTTGTGCTTGGGAAGGTGTGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CAA 90 bp TCCACATGGGCCATCTTCTCCTGTAGCAGAAGGTCCATCTCCTGCTaGTATTCCTTCAGGTGCCTTTCCTCTGACTCAAGTGCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: STWAIFSCSRRSISC*YSFRCLSSDSSASN
Trigger: GTTTGAGGCACTTGAGTCAGAGGAAAGGCACCTGAAGGAATACAAGCAGGAGATGGACCTTCTGCTACAGGAGAAGATGGCCCATGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS CCA 72 bp CCTTTCTTTATTCATCCTGCTTCCGTTTCGGCTTTTTaGGGTTCCGGGACCGACTCTTGGCCTTGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: PFFIHPASVSAF*GSGTDSWPCKE
Trigger: CTCTTTGCAAGGCCAAGAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAAGCAGGATGAATAAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000488406.1
ENST00000488608.5
CDS CAA 72 bp CCCTTTCTTTATTCATCCTGCTTCCGTTTCGGCTTTTaGGGGTTCCGGGACCGACTCTTGGCCTTGCAAAGA +
Preference number: 6 (lower is better)
Translates to: PFLYSSCFRFGF*GFRDRLLALQR
Trigger: TCTTTGCAAGGCCAAGAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAAGCAGGATGAATAAAGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000488406.1
ENST00000488608.5
CDS CAA 90 bp ATGTGCTCTCCCTTTCTTTATTCATCCTGCTTCCGTTTCGGCTTTTaGGGGTTCCGGGACCGACTCTTGGCCTTGCAAAGAGGGCATATA +
Preference number: 6 (lower is better)
Translates to: MCSPFLYSSCFRFGF*GFRDRLLALQRGHI
Trigger: TATATGCCCTCTTTGCAAGGCCAAGAGTCGGTCCCGGAACCCCAAAAAGCCGAAACGGAAGCAGGATGAATAAAGAAAGGGAGAGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000488406.1
ENST00000488608.5
CDS TCA 72 bp ACTCAAGTGCCTCAAACTCAGCCTTCAAACGAGCCTTaGTCTTCTCCATCTGCAGGGTCTTGTTCCTTCACG +
Preference number: 6 (lower is better)
Translates to: TQVPQTQPSNEP*SSPSAGSCSFT
Trigger: CGTGAAGGAACAAGACCCTGCAGATGGAGAAGATCAAGGCTCGTTTGAAGGCTGAGTTTGAGGCACTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488831.5
CDS TCA 72 bp CTCCTCTTAAAGACTCCATGCCATACAACCAAGGGTTaGGCTGTGGCTCATTCTAGAAGGTCCCCACACCTT +
Preference number: 6 (lower is better)
Translates to: LLLKTPCHTTKG*AVAHSRRSPHL
Trigger: AAGGTGTGGGGACCTTCTAGAATGAGCCACAGCTCAACCCTTGGTTGTATGGCATGGAGTCTTTAAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CCA 72 bp TATATCTTCACGTCGCTCCTTCTAGGCCTTAGGAAGTaGGGTTTTGAGCACTTTCTAGGTCGTAGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: YIFTSLLLGLRK*GFEHFLGRRPA
Trigger: AGCAGGCCTACGACCTAGAAAGTGCTCAAAACCCCACTTCCTAAGGCCTAGAAGGAGCGACGTGAAGATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337990.2
CDS CAA 72 bp GCCATCTTCTCCTGTAGCAGAAGGTCCATCTCCTGCTaGTATTCCTTCAGGTGCCTTTCCTCTGACTCAAGT +
Preference number: 6 (lower is better)
Translates to: AIFSCSRRSISC*YSFRCLSSDSS
Trigger: ACTTGAGTCAGAGGAAAGGCACCTGAAGGAATACAAGCAGGAGATGGACCTTCTGCTACAGGAGAAGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS TCA 72 bp ACTCAAGTGCCTCAAACTCAGCCTTCAAACGAGCCTTaGTCTTCTCCATCTGCAGGGTCTTGTTCCTGCAAT +
Preference number: 6 (lower is better)
Translates to: TQVPQTQPSNEP*SSPSAGSCSCN
Trigger: ATTGCAGGAACAAGACCCTGCAGATGGAGAAGATCAAGGCTCGTTTGAAGGCTGAGTTTGAGGCACTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337990.2
ENST00000476032.1
CDS CCA 72 bp TGTTTGATAGTGTTTTCCATCACATTGATGTCAGCGTaGATCAGTCGGAGTTCCTCCACATGGGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: CLIVFSITLMSA*ISRSSSTWAIF
Trigger: GAAGATGGCCCATGTGGAGGAACTCCGACTGATCCACGCTGACATCAATGTGATGGAAAACACTATCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS TCA 72 bp CAAACTCCACAGACACCTTGCTCTACCTTTAGGAAATaGTTTCCTCTACCAGGTCAAATTCTGTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: QTPQTPCSTFRK*FPLPGQILSLC
Trigger: GCAGAGAGACAGAATTTGACCTGGTAGAGGAAATCATTTCCTAAAGGTAGAGCAAGGTGTCTGTGGAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS GCA 72 bp TTAGGACCCAGGCTCTGTGATGTTACACTGATAAGCTaGAAATGGCTTTTGCCCAGTAGAGATGCAAATTAC +
Preference number: 6 (lower is better)
Translates to: LGPRLCDVTLIS*KWLLPSRDANY
Trigger: GTAATTTGCATCTCTACTGGGCAAAAGCCATTTGCAGCTTATCAGTGTAACATCACAGAGCCTGGGTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS TCA 72 bp AGGGTATTCAGTCCTATCTGCTATCTCATGCTCTTTTaGGTATTCCTATTAAGTGTCCTAAGGCCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: RVFSPICYLMLF*VFLLSVLRPLV
Trigger: CACCAGAGGCCTTAGGACACTTAATAGGAATACTCAAAAGAGCATGAGATAGCAGATAGGACTGAATACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CAA 72 bp GGCCACTTCCTGAAGACCAGGAAAGCTCAGTCTTTTTaGTTTTTAGAGGTTTCTAGATATCGCCTTCTAGAC +
Preference number: 6 (lower is better)
Translates to: GHFLKTRKAQSF*FLEVSRYRLLD
Trigger: GTCTAGAAGGCGATATCTAGAAACCTCTAAAAACAAAAAAGACTGAGCTTTCCTGGTCTTCAGGAAGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS TCA 72 bp TTGACTATTTACCAATTGATTAGGACCCAGGCTCTGTaGTGTTACACTGATAAGCTGCAAATGGCTTTTGCC +
Preference number: 6 (lower is better)
Translates to: LTIYQLIRTQAL*CYTDKLQMAFA
Trigger: GGCAAAAGCCATTTGCAGCTTATCAGTGTAACATCACAGAGCCTGGGTCCTAATCAATTGGTAAATAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CAA 72 bp AAGGGTATTCAGTCCTATCTGCTATCTCATGCTCTTTaGAGTATTCCTATTAAGTGTCCTAAGGCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: KGIQSYLLSHAL*SIPIKCPKASG
Trigger: ACCAGAGGCCTTAGGACACTTAATAGGAATACTCAAAAGAGCATGAGATAGCAGATAGGACTGAATACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CAA 90 bp AGTGGCTTATACTCATCATGCAGCCTCCTTGTAGACTCTAGCAGCTaGTTTAGGTCATTCTCAGATTGTTTGATAGTGTTTTCCATCACA +
Preference number: 6 (lower is better)
Translates to: SGLYSSCSLLVDSSS*FRSFSDCLIVFSIT
Trigger: TGTGATGGAAAACACTATCAAACAATCTGAGAATGACCTAAACAAGCTGCTAGAGTCTACAAGGAGGCTGCATGATGAGTATAAGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS TCA 72 bp CAAAGTGATTTCCCATCAGAAGAGAGCAATAATCAGTaGGTAGACTCAAGTATTCTTGGATGCCATGGAAGA +
Preference number: 6 (lower is better)
Translates to: QSDFPSEESNNQ*VDSSILGCHGR
Trigger: TCTTCCATGGCATCCAAGAATACTTGAGTCTACTCACTGATTATTGCTCTCTTCTGATGGGAAATCACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS GCA 72 bp AATGCTTTCCAATTTGCACATGATTTCTTGCTCATCTaGCATACTTTTCACTGTCAATTTCACGTCCCGAGA +
Preference number: 6 (lower is better)
Translates to: NAFQFAHDFLLI*HTFHCQFHVPR
Trigger: TCTCGGGACGTGAAATTGACAGTGAAAAGTATGGCAGATGAGCAAGAAATCATGTGCAAATTGGAAAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374839.8
ENST00000447788.6
ENST00000488608.5
ENST00000492653.5
CDS GCA 72 bp ATGCATGTTGTTTGCAATAGCTTGCAAACACAGACATaGATGTGGGCCAATAAAACTTTAACGAAAACAGGG +
Preference number: 6 (lower is better)
Translates to: MHVVCNSLQTQT*MWANKTLTKTG
Trigger: CCCTGTTTTCGTTAAAGTTTTATTGGCCCACATGCATGTCTGTGTTTGCAAGCTATTGCAAACAACATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CCA 72 bp GTTGTTTGCAATAGCTTGCAAACACAGACATGCATGTaGGCCAATAAAACTTTAACGAAAACAGGGAACAGA +
Preference number: 6 (lower is better)
Translates to: VVCNSLQTQTCM*ANKTLTKTGNR
Trigger: TCTGTTCCCTGTTTTCGTTAAAGTTTTATTGGCCCACATGCATGTCTGTGTTTGCAAGCTATTGCAAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CAA 72 bp TACTCATCATGCAGCCTCCTTGTAGACTCTAGCAGCTaGTTTAGGTCATTCTCAGATTGTTTGATAGTGTTT +
Preference number: 6 (lower is better)
Translates to: YSSCSLLVDSSS*FRSFSDCLIVF
Trigger: AAACACTATCAAACAATCTGAGAATGACCTAAACAAGCTGCTAGAGTCTACAAGGAGGCTGCATGATGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337990.2
ENST00000374839.8
ENST00000447788.6
ENST00000476032.1
ENST00000488608.5
ENST00000488831.5
ENST00000492653.5
CDS CAA 72 bp AGGGTCTTGTTCCTGATCTCTTTAATGCTTTCCAATTaGCACATGATTTCTTGCTCATCTGCCATACTTTTC +
Preference number: 6 (lower is better)
Translates to: RVLFLISLMLSN*HMISCSSAILF
Trigger: GAAAAGTATGGCAGATGAGCAAGAAATCATGTGCAAATTGGAAAGCATTAAAGAGATCAGGAACAAGACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374839.8
ENST00000447788.6
ENST00000488608.5
ENST00000492653.5
CDS CCA 72 bp TTTCTTGACTATATAGATATTTGTTCCAAATGCTCCTaGAACCAGCTTTATAATCCTGCTGGTTCCCTCATT +
Preference number: 6 (lower is better)
Translates to: FLDYIDICSKCS*NQLYNPAGSLI
Trigger: AATGAGGGAACCAGCAGGATTATAAAGCTGGTTCCAGGAGCATTTGGAACAAATATCTATATAGTCAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488608.5
CDS CAA 72 bp TTACAGTTTTATTGTCCTGTGGGATGTAAACCAGTTTaGCATCTAACTTTGCAAATTTGTTTCAGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: LQFYCPVGCKPV*HLTLQICFSLP
Trigger: AGGAAGGCTGAAACAAATTTGCAAAGTTAGATGCAAAACTGGTTTACATCCCACAGGACAATAAAACTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488608.5