RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3HAV1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105939

Ensembl transcript IDs: ENST00000242351.10, ENST00000460845.5, ENST00000464606.5, ENST00000471652.1, ENST00000680309.1

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTACTCCCAGCACTGAGTGGATGCAGCCAGGGAGAACGATGTCCTaGAGTGTGTGGGTTAGTGCCACACAACGAAGAATTATTCTGTAC +
Preference number: 1 (lower is better)
Translates to: TTPSTEWMQPGRTMS*SVWVSATQRRIILY
Trigger: GTACAGAATAATTCTTCGTTGTGTGGCACTAACCCACACACTGCAGGACATCGTTCTCCCTGGCTGCATCCACTCAGTGCTGGGAGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR TCA 90 bp GCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTTGTTCTaGTTCTGTGCTCACCAGGAAACAAATTTCATCTCCGTAGGGGGC +
Preference number: 1 (lower is better)
Translates to: APGRHRASLGYCSLF*FCAHQETNFISVGG
Trigger: GCCCCCTACGGAGATGAAATTTGTTTCCTGGTGAGCACAGAATCAGAACAAAGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR GCA 90 bp CGTCCTTCAGTAGGAATGGCCCTGCTCCTAGGTTCTTGGCTCACTTaGCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGT +
Preference number: 1 (lower is better)
Translates to: RPSVGMALLLGSWLT*QDYNSTRVYQLCLC
Trigger: ACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGTGAGCCAAGAACCTAGGAGCAGGGCCATTCCTACTGAAGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR CCA 90 bp ACAAAATTTACCCAATATATCAGTGTACAAAGCATGCTGCTGGGCTaGGCATCAGGCGTGGCACAGCAAACAAGACAGACTGACTCAACC +
Preference number: 1 (lower is better)
Translates to: TKFTQYISVQSMLLG*ASGVAQQTRQTDST
Trigger: GGTTGAGTCAGTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGTACACTGATATATTGGGTAAATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR CCA 90 bp ATTCAACAAAATTTACCCAATATATCAGTGTACAAAGCATGCTGCTaGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACTGACT +
Preference number: 1 (lower is better)
Translates to: IQQNLPNISVYKACC*AGHQAWHSKQDRLT
Trigger: AGTCAGTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGTACACTGATATATTGGGTAAATTTTGTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR GCA 90 bp TTTATTCAACAAAATTTACCCAATATATCAGTGTACAAAGCATGCTaGTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACTG +
Preference number: 1 (lower is better)
Translates to: FIQQNLPNISVYKAC*WAGHQAWHSKQDRL
Trigger: CAGTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGTACACTGATATATTGGGTAAATTTTGTTGAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR GCA 90 bp CATAATTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCC +
Preference number: 1 (lower is better)
Translates to: HNYTKSPNGQLTPVG*FSLSLTCQLLLPHS
Trigger: GGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR GCA 90 bp TGGCTCACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATaGTTGTGTGAAGCTGGTTATTGCAATTCATTGTTCTCAAAATAC +
Preference number: 1 (lower is better)
Translates to: WLTCQDYNSTRVYQL*LCEAGYCNSLFSKY
Trigger: GTATTTTGAGAACAATGAATTGCAATAACCAGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGTGAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACGACTACTCCCAGCACTaGGTGGATGCAGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDDYSQH*VDAARE
Trigger: CTCCCTGGCTGCATCCACTCAGTGCTGGGAGTAGTC...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR TCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACGCTGACGCCCAGAAATaGTTTCATTGGCATGGGGTG +
Preference number: 2 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDADAQK*FHWHGV
Trigger: CACCCCATGCCAATGAAATCATTTCTGGGCGTCAGC...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGGCGGGCAGATTGCCTaGGCTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPGGQIA*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAGGCAATCTGCCCGCC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACGAAGGAAGGAAATATTaGTCCAAGCACGTCAAGGGC +
Preference number: 2 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDEGRKY*SKHVKG
Trigger: GCCCTTGACGTGCTTGGACCAATATTTCCTTCCTTC...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR CCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACGCTGTTGGAAAGAGTTaGACAAACTGCACCCCTACA +
Preference number: 2 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDAVGKS*TNCTPT
Trigger: TGTAGGGGTGCAGTTTGTCCAACTCTTTCCAACAGC...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCTGAGCTCAGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 2 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWLSSGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGCTGACGCCCAGAAATaGTTTCATTGGCATGGGGTG +
Preference number: 2 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSADAQK*FHWHGV
Trigger: CACCCCATGCCAATGAAATCATTTCTGGGCGTCAGC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTTCATTGGCATGGGGTaGAACCTGGGCATCAGAATT +
Preference number: 2 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPFIGMG*NLGIRI
Trigger: AATTCTGATGCCCAGGTTGCACCCCATGCCAATGAA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTGCTGACGCCCAGAAATaGTTTCATTGGCATGGGGTG +
Preference number: 2 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAADAQK*FHWHGV
Trigger: CACCCCATGCCAATGAAATCATTTCTGGGCGTCAGC...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGGTTCTTGGCTCACTTaGCAAGACTACAATAGCACT +
Preference number: 2 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTGSWLT*QDYNST
Trigger: AGTGCTATTGTAGTCTTGGCAAGTGAGCCAAGAACC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAGGCGGGCAGATTGCCTaGGCTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIGGQIA*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAGGCAATCTGCCCGCC...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR TCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCGATGAGCCCAGGGCATaGACATCTCAAGCATCTGTC +
Preference number: 2 (lower is better)
Translates to: LQSILSLTKTLALTASSSDEPRA*TSQASV
Trigger: GACAGATGCTTGAGATGTTCATGCCCTGGGCTCATC...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
3UTR-3UTR TCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGCTCCAGATTCACGAGTaGCTTGATGAGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: NANGNCRVMQTGTFQENRLQIHE*LDEPRA
Trigger: TGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAG...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
3UTR-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATCAGTTATGCTTGTGTaGAGCTGGTTATTGCAATTC +
Preference number: 2 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTSVMLV*SWLLQF
Trigger: GAATTGCAATAACCAGCTTCACACAAGCATAACTGA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGATAAGGTACAGTACTaGAGCCATGTCTGCAATAGC +
Preference number: 2 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSDKVQY*SHVCNS
Trigger: GCTATTGCAGACATGGCTGCAGTACTGTACCTTATC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTCTCTGAGCCTTACTTaGCAGCTCTTATTACCGCAT +
Preference number: 2 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWSLSLT*QLLLPH
Trigger: ATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGAACAGAATGGTTATaGCATCCTTCTGACGCTGTA +
Preference number: 2 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGTEWL*HPSDAV
Trigger: TACAGCGTCAGAAGGATGCCATAACCATTCTGTTCC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTAAATTTGGGGACCACTaGTCTAAGACATTAGATAAC +
Preference number: 2 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPKFGDH*SKTLDN
Trigger: GTTATCTAATGTCTTAGATCAGTGGTCCCCAAATTT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGATGAAAAGCCTGACCTaGGAAAAAGCCTTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWMKSLT*EKAFSV
Trigger: TACAGAGAAGGCTTTTTCTCAGGTCAGGCTTTTCAT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTCATTGGCATGGGGTaGAACCTGGGCATCAGAATT +
Preference number: 2 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIFIGMG*NLGIRI
Trigger: AATTCTGATGCCCAGGTTGCACCCCATGCCAATGAA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATACTGCAGCCATGTCTaGAATAGCACTTCAATTTTA +
Preference number: 2 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTYCSHV*NSTSIL
Trigger: TAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTCTCTGAGCCTTACTTaGCAGCTCTTATTACCGCAT +
Preference number: 2 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDISLSLT*QLLLPH
Trigger: ATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACT +
Preference number: 2 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSLTPVG*FSLSLT
Trigger: AGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACT +
Preference number: 2 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWLTPVG*FSLSLT
Trigger: AGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGGTTCTTGGCTCACTTaGCAAGACTACAATAGCACT +
Preference number: 2 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIGSWLT*QDYNST
Trigger: AGTGCTATTGTAGTCTTGGCAAGTGAGCCAAGAACC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTCAGTTATGCTTGTGTaGAGCTGGTTATTGCAATTC +
Preference number: 2 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWSVMLV*SWLLQF
Trigger: GAATTGCAATAACCAGCTTCACACAAGCATAACTGA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACT +
Preference number: 2 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDILTPVG*FSLSLT
Trigger: AGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATTTGTTCTGATTCTGTaGTCACCAGGAAACAAATTT +
Preference number: 2 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTFVLIL*SPGNKF
Trigger: AAATTTGTTTCCTGGTGAGCACAGAATCAGAACAAA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGGAACAGAATGGTTATaGCATCCTTCTGACGCTGTA +
Preference number: 2 (lower is better)
Translates to: SEGKTWFIRRKEILVQARGTEWL*HPSDAV
Trigger: TACAGCGTCAGAAGGATGCCATAACCATTCTGTTCC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTTTACCAGTTACATCTaGGACAAGGTAAACTTTCCA +
Preference number: 2 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWFTSYI*DKVNFP
Trigger: TGGAAAGTTTACCTTGTCTCAGATGTAACTGGTAAA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTATGAAAAGCCTGACCTaGGAAAAAGCCTTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: SEGKTWFIRRKEILVQARMKSLT*EKAFSV
Trigger: TACAGAGAAGGCTTTTTCTCAGGTCAGGCTTTTCAT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTACTGCAGCCATGTCTaGAATAGCACTTCAATTTTA +
Preference number: 2 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSYCSHV*NSTSIL
Trigger: TAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGGAACAGAATGGTTATaGCATCCTTCTGACGCTGTA +
Preference number: 2 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYGTEWL*HPSDAV
Trigger: TACAGCGTCAGAAGGATGCCATAACCATTCTGTTCC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTTTACCAGTTACATCTaGGACAAGGTAAACTTTCCA +
Preference number: 2 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAFTSYI*DKVNFP
Trigger: TGGAAAGTTTACCTTGTCTCAGATGTAACTGGTAAA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTATTGTTCTTTGTTCTaGTTCTGTGCTCACCAGGAA +
Preference number: 2 (lower is better)
Translates to: SEGKTWFIRRKEILVQARYCSLF*FCAHQE
Trigger: TTCCTGGTGAGCACAGAATCAGAACAAAGAACAATA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTTTGTTCTGATTCTGTaGTCACCAGGAAACAAATTT +
Preference number: 2 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWFVLIL*SPGNKF
Trigger: AAATTTGTTTCCTGGTGAGCACAGAATCAGAACAAA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTAAATTTGGGGACCACTaGTCTAAGACATTAGATAAC +
Preference number: 2 (lower is better)
Translates to: SEGKTWFIRRKEILVQARKFGDH*SKTLDN
Trigger: GTTATCTAATGTCTTAGATCAGTGGTCCCCAAATTT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTTACCAGTTACATCTaGGACAAGGTAAACTTTCCA +
Preference number: 2 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIFTSYI*DKVNFP
Trigger: TGGAAAGTTTACCTTGTCTCAGATGTAACTGGTAAA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR TCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAGGAAGGAGTCAAAGATaGCTTCCAGATTTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIGRSQR*LPDFCL
Trigger: CAAGCAGAAATCTGGAAGTCATCTTTGACTCCTTCC...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR GCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCAATGCAAATGGAAACTaGAGAGTAATGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: LQSILSLTKTLALTASSSNANGN*RVMQTG
Trigger: TCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
3UTR CAA 90 bp CTCACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTaGTGTGAAGCTGGTTATTGCAATTCATTGTTCTCAAAATACTTT +
Preference number: 2 (lower is better)
Translates to: LTCQDYNSTRVYQLC*CEAGYCNSLFSKYF
Trigger: AAAGTATTTTGAGAACAATGAATTGCAATAACCAGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATATGTCTAATGGGCTGTTaGAAAGAGTTGGACAAACTG +
Preference number: 2 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCICLMGC*KELDKL
Trigger: CAGTTTGTCCAACTCTTTCCAACAGCCCATTAGACA...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATATTCTGCTTGAGCCAATaGGTAGATGGTGATGCTTTT +
Preference number: 2 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIFCLSQ*VDGDAF
Trigger: AAAAGCATCACCATCTACCCATTGGCTCAAGCAGAA...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR GCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTAATGCAAATGGAAACTaGAGAGTAATGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSNANGN*RVMQTG
Trigger: TCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
3UTR GCA 72 bp CATAATAACTGGGGACTACTCCCAGCACTGAGTGGATaGAGCCAGGGAGAACGATGTCCTGCAGTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: HNNWGLLPALSG*SQGERCPAVCG
Trigger: CCCACACACTGCAGGACATCGTTCTCCCTGGCTGCATCCACTCAGTGCTGGGAGTAGTCCCCAGTTATTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR CAA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACGGTAGGACCTACAGCTaGTCCGAGAGAGTAACTCAT +
Preference number: 3 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDGRTYS*SERVTH
Trigger: ATGAGTTACTCTCTCGGACAAGCTGTAGGTCCTACC...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR TCA 72 bp CTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACTaGCTCAACCCTCAGGGGGCTTACATTCTAATGCAG +
Preference number: 3 (lower is better)
Translates to: LGIRRGTANKTD*LNPQGAYILMQ
Trigger: CTGCATTAGAATGTAAGCCCCCTGAGGGTTGAGTCAGTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR GCA 72 bp AGCACTGAGTGGATGCAGCCAGGGAGAACGATGTCCTaGAGTGTGTGGGTTAGTGCCACACAACGAAGAATT +
Preference number: 3 (lower is better)
Translates to: STEWMQPGRTMS*SVWVSATQRRI
Trigger: AATTCTTCGTTGTGTGGCACTAACCCACACACTGCAGGACATCGTTCTCCCTGGCTGCATCCACTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR CCA 72 bp CTGTGGTCAGTGGGTTATTGGTGGTTTCATAATAACTaGGGACTACTCCCAGCACTGAGTGGATGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: LWSVGYWWFHNN*GLLPALSGCSQ
Trigger: CTGGCTGCATCCACTCAGTGCTGGGAGTAGTCCCCAGTTATTATGAAACCACCAATAACCCACTGACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR CCA 72 bp ACCCAATATATCAGTGTACAAAGCATGCTGCTGGGCTaGGCATCAGGCGTGGCACAGCAAACAAGACAGACT +
Preference number: 3 (lower is better)
Translates to: TQYISVQSMLLG*ASGVAQQTRQT
Trigger: AGTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGTACACTGATATATTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGCCAAGGCGGGCAGATaGCCTGAGCTCAGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEAKAGR*PELRSL
Trigger: CAAACTCCTGAGCTCAGGCAATCTGCCCGCCTTGGC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR TCA 72 bp GGCGTGGGGGTGGGGGCGCTACTAGCATTTAGTATGTaGGAGCCAAGTATGCAGAACATCTTGCAATACATT +
Preference number: 3 (lower is better)
Translates to: GVGVGALLAFSM*EPSMQNILQYI
Trigger: AATGTATTGCAAGATGTTCTGCATACTTGGCTCTCACATACTAAATGCTAGTAGCGCCCCCACCCCCACGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR GCA 72 bp GCGCTGACGCCCAGAAATGATTTCATTGGCATGGGGTaGAACCTGGGCATCAGAATTTGTTTAAAACCTCCC +
Preference number: 3 (lower is better)
Translates to: ALTPRNDFIGMG*NLGIRICLKPP
Trigger: GGGAGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATTTCTGGGCGTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR CCA 72 bp TGGATGCAGCCAGGGAGAACGATGTCCTGCAGTGTGTaGGTTAGTGCCACACAACGAAGAATTATTCTGTAC +
Preference number: 3 (lower is better)
Translates to: WMQPGRTMSCSV*VSATQRRIILY
Trigger: GTACAGAATAATTCTTCGTTGTGTGGCACTAACCCACACACTGCAGGACATCGTTCTCCCTGGCTGCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR GCA 72 bp GTAGGAATGGCCCTGCTCCTAGGTTCTTGGCTCACTTaGCAAGACTACAATAGCACTCGCGTTTATCAGTTA +
Preference number: 3 (lower is better)
Translates to: VGMALLLGSWLT*QDYNSTRVYQL
Trigger: TAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGTGAGCCAAGAACCTAGGAGCAGGGCCATTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR CCA 72 bp AATTTACCCAATATATCAGTGTACAAAGCATGCTGCTaGGCTGGGCATCAGGCGTGGCACAGCAAACAAGAC +
Preference number: 3 (lower is better)
Translates to: NLPNISVYKACC*AGHQAWHSKQD
Trigger: GTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGTACACTGATATATTGGGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCCAAGGCGGGCAGATaGCCTGAGCTCAGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIAKAGR*PELRSL
Trigger: CAAACTCCTGAGCTCAGGCAATCTGCCCGCCTTGGC...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCCTGCTCCTAGGTTCTaGGCTCACTTGCCAAGACTA +
Preference number: 3 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWPAPRF*AHLPRL
Trigger: TAGTCTTGGCAAGTGAGCCAAGAACCTAGGAGCAGG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTCCTGGGCATCAGAATTaGTTTAAAACCTCCCAGATG +
Preference number: 3 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPPGHQN*FKTSQM
Trigger: CATCTGGGAGGTTTTAAACAAATTCTGATGCCCAGG...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR GCA 72 bp CAACAAAATTTACCCAATATATCAGTGTACAAAGCATaGTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAA +
Preference number: 3 (lower is better)
Translates to: QQNLPNISVYKA*CWAGHQAWHSK
Trigger: TTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGTACACTGATATATTGGGTAAATTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR CCA 72 bp TGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTaGGATATTGTTCTTTGTTCTGATTCTGTGCTCACC +
Preference number: 3 (lower is better)
Translates to: WKKKLLVDTGPL*DIVLCSDSVLT
Trigger: GGTGAGCACAGAATCAGAACAAAGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCCTGGGCATCAGAATTaGTTTAAAACCTCCCAGATG +
Preference number: 3 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWPGHQN*FKTSQM
Trigger: CATCTGGGAGGTTTTAAACAAATTCTGATGCCCAGG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR GCA 72 bp ACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACTTGCCAGCTCTTATTA +
Preference number: 3 (lower is better)
Translates to: TKSPNGQLTPVG*FSLSLTCQLLL
Trigger: TAATAAGAGCTGGCAAGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGGCCTCTTTGGGATATaGTTCTTTGTTCTGATTCTG +
Preference number: 3 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWGLFGI*FFVLIL
Trigger: CAGAATCAGAACAAAGAACAATATCCCAAAGAGGCC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGACAGGAGAGAAAGGTaGCTGCAATTACAGAAAATT +
Preference number: 3 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSDRRER*LQLQKI
Trigger: AATTTTCTGTAATTGCAGCAACCTTTCTCTCCTGTC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGACAGGAGAGAAAGGTaGCTGCAATTACAGAAAATT +
Preference number: 3 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWDRRER*LQLQKI
Trigger: AATTTTCTGTAATTGCAGCAACCTTTCTCTCCTGTC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCCTGGGCATCAGAATTaGTTTAAAACCTCCCAGATG +
Preference number: 3 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYPGHQN*FKTSQM
Trigger: CATCTGGGAGGTTTTAAACAAATTCTGATGCCCAGG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGAAACTTTCCAACACATaGGAATCATCAGAAGGGCTT +
Preference number: 3 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEKLSNT*ESSEGL
Trigger: AAGCCCTTCTGATGATTCCAATGTGTTGGAAAGTTT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTGACAGGAGAGAAAGGTaGCTGCAATTACAGAAAATT +
Preference number: 3 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEADRRER*LQLQKI
Trigger: AATTTTCTGTAATTGCAGCAACCTTTCTCTCCTGTC...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTTATCAGTTATGCTaGTGTGAAGCTGGTTATTGC +
Preference number: 3 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIVYQLC*CEAGYC
Trigger: GCAATAACCAGCTTCACACAAGCATAACTGATAAAC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGGCCTCTTTGGGATATaGTTCTTTGTTCTGATTCTG +
Preference number: 3 (lower is better)
Translates to: SEGKTWFIRRKEILVQARGLFGI*FFVLIL
Trigger: CAGAATCAGAACAAAGAACAATATCCCAAAGAGGCC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGTTTATCAGTTATGCTaGTGTGAAGCTGGTTATTGC +
Preference number: 3 (lower is better)
Translates to: SEGKTWFIRRKEILVQARVYQLC*CEAGYC
Trigger: GCAATAACCAGCTTCACACAAGCATAACTGATAAAC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR GCA 72 bp TGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATaGTTGTGTGAAGCTGGTTATTGCAATTCATTGTTC +
Preference number: 3 (lower is better)
Translates to: CQDYNSTRVYQL*LCEAGYCNSLF
Trigger: GAACAATGAATTGCAATAACCAGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACAAACTTTCCAACACATaGGAATCATCAGAAGGGCTT +
Preference number: 3 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYKLSNT*ESSEGL
Trigger: AAGCCCTTCTGATGATTCCAATGTGTTGGAAAGTTT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR-3UTR CAA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAATTAACTCCAGTTGGTaGCTTCTCTCTGAGCCTTAC +
Preference number: 3 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIINSSW*LLSEPY
Trigger: GTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAAT...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR GCA 72 bp CCAAATCAGTTTCATCAGAATGATAAGGTACAGTACTaGAGCCATGTCTGCAATAGCACTTCAATTTTACTT +
Preference number: 3 (lower is better)
Translates to: PNQFHQNDKVQY*SHVCNSTSILL
Trigger: AAGTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
3UTR GCA 72 bp ACAAGCATCTTACTCATCGATAATGCAAATGGAAACTaGAGAGTAATGCAAACAGGAACTTTTCAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: TSILLIDNANGN*RVMQTGTFQEN
Trigger: GTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATTATCGATGAGTAAGATGCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
3UTR CCA 72 bp GTGTGTAGGTGGAGCATATTACCTCTGAATTGGATTTaGAGGATAATAAAGAAGATGTATTTCTATTTGTCG +
Preference number: 3 (lower is better)
Translates to: VCRWSILPLNWI*RIIKKMYFYLS
Trigger: CGACAAATAGAAATACATCTTCTTTATTATCCTCCAAATCCAATTCAGAGGTAATATGCTCCACCTACACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCGGGCGGTGCTACTGCTaGGCGCGCCCGGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSGRCYC*ARPESA
Trigger: CGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCC...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACCTCCGGGTCCGCCATaGCGCGCTGGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTPPGPP*RAGCAG
Trigger: GCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCCACCACCGATCGGGTaGTCCCGGCCTCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWPPPIG*SRPRRR
Trigger: CCGGCGGCGAGGCCGGGATCACCCGATCGGTGGTGG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR TCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCAGCCTTGGACGAGCCTaGGGGAGGCCGAGCGCGATC +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLSLGRA*GRPSAI
Trigger: GATCGCGCTCGGCCTCCCTCAGGCTCGTCCAAGGCT...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCCTGCTGGTGACCGCCTaGGGTGGCCCCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLLLVTA*GGPLSV
Trigger: AACCGAGAGGGGGCCACCCCAGGCGGTCACCAGCAG...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGGTTGTCACCGTGACTaGGCGTGGGGGTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPGCHRD*AWGWGR
Trigger: GCGCCCCCACCCCCACGCCCAGTCACGGTGACAACC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTAGCCTTGGACGAGCCTaGGGGAGGCCGAGCGCGATC +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPSLGRA*GRPSAI
Trigger: GATCGCGCTCGGCCTCCCTCAGGCTCGTCCAAGGCT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACTGCTGGTGACCGCCTaGGGTGGCCCCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLLVTA*GGPLSV
Trigger: AACCGAGAGGGGGCCACCCCAGGCGGTCACCAGCAG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATTGTGGTTGTCACCGTaGCTGGGCGTGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLWLSP*LGVGVG
Trigger: CCCCACCCCCACGCCCAGTCACGGTGACAACCACAA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTATGGCTGTGCTGGCTCTaGCGCGGCGCGGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLWLCWL*RGAGLG
Trigger: ACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCA...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAAGTCTCTGGCAGTACTTaGGACGGCAGACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHEVSGST*DGRPGL
Trigger: GAGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGAC...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCCTCCGGGTCCGCCATaGCGCGCTGGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAPPGPP*RAGCAG
Trigger: GCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACGAGGGAGAGATCACATaGGGCCATGACAGCGGTTTT +
Preference number: 4 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDEGEIT*GHDSGF
Trigger: AAAACCGCTGTCATGGCCCCATGTGATCTCTCCCTC...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCCACCACCGATCGGGTaGTCCCGGCCTCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYPPPIG*SRPRRR
Trigger: CCGGCGGCGAGGCCGGGATCACCCGATCGGTGGTGG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTAGCCTTGGACGAGCCTaGGGGAGGCCGAGCGCGATC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSSLGRA*GRPSAI
Trigger: GATCGCGCTCGGCCTCCCTCAGGCTCGTCCAAGGCT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCTTCCGTGAGCCCGCCTaGAATGGCACAACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLFREPA*NGTTPL
Trigger: GAGGGGAGTTGTGCCATTTCAGGCGGGCTCACGGAA...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTCGGGGTTCAGCCCGTaGTCCCTCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPSGFSP*SLMMAS
Trigger: GCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTCCGCCATGGCGCGCTaGCTGTGCTGGCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDISAMAR*LCWLCR
Trigger: GCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCCCTCCGGGTCCGCCATaGCGCGCTGGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQSILSLTKTLALTASSSPPGPP*RAGCAG
Trigger: GCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGG...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGAGACCCGGGCTCGAGTaGTGGCCACCACCGATCGGG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWRPGLE*WPPPIG
Trigger: CCCGATCGGTGGTGGCCACCACTCGAGCCCGGGTCT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR TCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTCCACCACCGATCGGGTaGTCCCGGCCTCGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSPPPIG*SRPRRR
Trigger: CCGGCGGCGAGGCCGGGATCACCCGATCGGTGGTGG...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACTGCTGCACATACCACTaGGGCACAAATGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDCCTYH*GTNVGL
Trigger: AAGACCAACATTTGTGCCTCAGTGGTATGTGCAGCA...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTGGCTGTGCTGGCTCTaGCGCGGCGCGGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIWLCWL*RGAGLG
Trigger: ACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAATGGCGCGCTGGCTGTaGTGGCTCTGCCGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIMARWL*WLCRGA
Trigger: CGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCAT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTCGGGCCCGGCCACCTaGAGCACCTCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDISGPAT*STSQSC
Trigger: GCAGCTCTGTGAGGTGCTGCAGGTGGCCGGGCCCGA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGGTGACCGCCTGGGGTaGCCCCCTCTCGGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIGDRLG*PPLGSR
Trigger: CCTAGAACCGAGAGGGGGCCACCCCAGGCGGTCACC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGGGCGGTGCTACTGCTaGGCGCGCCCGGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIGRCYC*ARPESA
Trigger: CGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCC...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACTGCGATTCTGCCAGTaGCCTGGACATCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHELRFCQ*PGHLGK
Trigger: CTTCCCGAGATGTCCAGGCCACTGGCAGAATCGCAG...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACTTGTGCAGGGGCAGTaGATTCCCCAGGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLVQGQ*IPQVWW
Trigger: CCACCACACCTGGGGAATCCACTGCCCCTGCACAAG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGCCGAGCGCGATCCTaGCTCCCCAGATACGTGAAC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGRARS*LPRYVN
Trigger: GTTCACGTATCTGGGGAGTCAGGATCGCGCTCGGCC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGGCAGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACTGAGCTCAGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLSSGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCCTCCAGATTCACGAGTaGCTTGATGAGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLLQIHE*LDEPRA
Trigger: TGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAG...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCCGCGGGCGGTGCTACTaGTGGGCGCGCCCGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCRGRCY*WARPES
Trigger: TGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCG...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTCGGGGTTCAGCCCGTaGTCCCTCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWSGFSP*SLMMAS
Trigger: GCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACAGAGTGCTGACTTGTaGAGGGGCAGTGGATTCCCC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTQSADL*RGSGFP
Trigger: GGGGAATCCACTGCCCCTGCACAAGTCAGCACTCTG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR CCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCGGTGACCGCCTGGGGTaGCCCCCTCTCGGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LQSILSLTKTLALTASSSGDRLG*PPLGSR
Trigger: CCTAGAACCGAGAGGGGGCCACCCCAGGCGGTCACC...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTAGACCCGGGCTCGAGTaGTGGCCACCACCGATCGGG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIRPGLE*WPPPIG
Trigger: CCCGATCGGTGGTGGCCACCACTCGAGCCCGGGTCT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAATTATCGCAGGGTCTCTaGCAGTACTTGCGACGGCAG +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHELSQGL*QYLRRQ
Trigger: CTGCCGTCGCAAGTACTGCCAGAGACCCTGCGATAA...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAAAGCCTGTGCCCTTTCTaGTGGTCACAGCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHESLCPF*WSQLQV
Trigger: CACCTGAAGCTGTGACCACCAGAAAGGGCACAGGCT...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAAATTCTGCCAGTGGCCTaGACATCTCGGGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHEILPVA*TSREAG
Trigger: ACCTGCTTCCCGAGATGTCCAGGCCACTGGCAGAAT...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTGGATTCCCCAGGTGTaGTGGGGACCAGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPWIPQV*WGPGSS
Trigger: TGAGGAACCTGGTCCCCACCACACCTGGGGAATCCA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGCCCGTGCTCCCTCATaGTGGCCAGCACCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWARAPS*WPAPFC
Trigger: ACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACAGCCTTGGACGAGCCTaGGGGAGGCCGAGCGCGATC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYSLGRA*GRPSAI
Trigger: GATCGCGCTCGGCCTCCCTCAGGCTCGTCCAAGGCT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACAAGACAAATTTCCTCTaGGTCATGATCATCCACCCT +
Preference number: 4 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDKTNFL*VMIIHP
Trigger: AGGGTGGATGATCATGACTCAGAGGAAATTTGTCTT...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTTCCGTGAGCCCGCCTaGAATGGCACAACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSFREPA*NGTTPL
Trigger: GAGGGGAGTTGTGCCATTTCAGGCGGGCTCACGGAA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGCGGGCAGATTGCCTaGGCTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGGQIA*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAGGCAATCTGCCCGCC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACGCGGGCGGTGCTACTaGTGGGCGCGCCCGGAGTCA +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIRGRCY*WARPES
Trigger: TGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTCGGGCCCGGCCACCTaGAGCACCTCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYSGPAT*STSQSC
Trigger: GCAGCTCTGTGAGGTGCTGCAGGTGGCCGGGCCCGA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTGTCTCTGGCAGTACTTaGGACGGCAGACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAVSGST*DGRPGL
Trigger: GAGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGAC...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTCCAGCACTGAGTGGATaGAGCCAGGGAGAACGATGT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPPALSG*SQGERC
Trigger: ACATCGTTCTCCCTGGCTGCATCCACTCAGTGCTGG...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCAGACTGCAGCTCTGTTaGTTGAGGAAAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLRLQLC*LRKGQQ
Trigger: CTGCTGCCCTTTCCTCAAGCAACAGAGCTGCAGTCT...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460845.5
CDS-3UTR CCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCGAACACGGTGGCTGCTaGTTACAAATCTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLEHGGC*LQICCR
Trigger: TCGGCAGCAGATTTGTAACCAGCAGCCACCGTGTTC...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGTGAAGAAGGAGCTCTaGGCCCTGGGGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPVKKEL*ALGDSS
Trigger: AGAAGAATCCCCCAGGGCCCAGAGCTCCTTCTTCAC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAATTCTGCCAGTGGCCTaGACATCTCGGGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTILPVA*TSREAG
Trigger: ACCTGCTTCCCGAGATGTCCAGGCCACTGGCAGAAT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTGCTGGCTGATGGTCTaGCCCTCTCTTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPCWLMV*PSLHLL
Trigger: CAGCAGATGAAGAGAGGGCCAGACCATCAGCCAGCA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACGACACAGGGCCTCTTTaGGATATTGTTCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDDTGPL*DIVLCS
Trigger: AGAACAAAGAACAATATCCCAAAGAGGCCCTGTGTC...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTCCTCTCAGCAGACGCTaGAGCAGACGCAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPPLSRR*SRRKKF
Trigger: GAATTTCTTGCGTCTGCTTCAGCGTCTGCTGAGAGG...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGGCCGAGCGCGATCCTaGCTCCCCAGATACGTGAAC +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARGRARS*LPRYVN
Trigger: GTTCACGTATCTGGGGAGTCAGGATCGCGCTCGGCC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTGGCCGAGCGCGATCCTaGCTCCCCAGATACGTGAAC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPGRARS*LPRYVN
Trigger: GTTCACGTATCTGGGGAGTCAGGATCGCGCTCGGCC...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCATTCGTCCAGGATGTaGGGCTCTTCCAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSHSSRM*GSSSWG
Trigger: CCCCCAACTGGAAGAGCCTCACATCCTGGACGAATG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGAGGTCTTTGCTGGCTaGTGGTCTGGCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSEVFAG*WSGPLF
Trigger: GAAGAGAGGGCCAGACCATCAGCCAGCAAAGACCTC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGCTGACGCCCAGAAATaGTTTCATTGGCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTADAQK*FHWHGV
Trigger: CACCCCATGCCAATGAAATCATTTCTGGGCGTCAGC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTAGGCAGAGGTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAACCTCTGCCT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGACTACTCCCAGCACTaGGTGGATGCAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEDYSQH*VDAARE
Trigger: CTCCCTGGCTGCATCCACTCAGTGCTGGGAGTAGTC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGGAAAGGGCAGCAGGTaGCTGAGGCAGAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIGKGSR*LRQSAD
Trigger: GTCAGCACTCTGCCTCAGTCACCTGCTGCCCTTTCC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAGCACCTCACAGAGCTaGGGCTCAGACAGCGCGATC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDISTSQS*GSDSAI
Trigger: GATCGCGCTGTCTGAGCCGCAGCTCTGTGAGGTGCT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGTCTCTGGCAGTACTTaGGACGGCAGACCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIVSGST*DGRPGL
Trigger: GAGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGAC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAAGGAAAGCAAGCCTGTaGCCTTTCTGGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTRKASL*PFWWSQ
Trigger: CTGTGACCACCAGAAAGGGCACAGGCTTGCTTTCCT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGTGTACAAAGCATGCTaGTGGGCTGGGCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWVYKAC*WAGHQA
Trigger: CGCCTGATGCCCAGCCCAGCAGCATGCTTTGTACAC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTAGACTGCAGCTCTGTTaGTTGAGGAAAGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPRLQLC*LRKGQQ
Trigger: CTGCTGCCCTTTCCTCAAGCAACAGAGCTGCAGTCT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR CCA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTTCCGCCATGGCGCGCTaGCTGTGCTGGCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FQKENSFSDLVSFQSHHASAMAR*LCWLCR
Trigger: GCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGA...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCAGACCCGGGCTCGAGTaGTGGCCACCACCGATCGGG +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCRPGLE*WPPPIG
Trigger: CCCGATCGGTGGTGGCCACCACTCGAGCCCGGGTCT...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGAACACGGTGGCTGCTaGTTACAAATCTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTEHGGC*LQICCR
Trigger: TCGGCAGCAGATTTGTAACCAGCAGCCACCGTGTTC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGGACCGGAGGCAGTTaGGAAAACGACAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGTGGS*ENDSSL
Trigger: GAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCTGGAGAGGCGTCGGATaGGAAAGGAATCACAACTCA +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLWRGVG*ERNHNS
Trigger: TGAGTTGTGATTCCTTTCCCATCCGACGCCTCTCCA...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTACAAAGCATGCTGCTaGGCTGGGCATCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWYKACC*AGHQAW
Trigger: CCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGTA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTATTCCCCAGGTGTGGTaGGGACCAGGTTCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSIPQVW*GPGSSD
Trigger: GTCTGAGGAACCTGGTCCCCACCACACCTGGGGAAT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTACCGGCCCAGCAAGTTaGGTTTGCAGAGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSTGPAS*VCRDAG
Trigger: ACCTGCATCTCTGCAAACTCAACTTGCTGGGCCGGT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGCCCGTGCTCCCTCATaGTGGCCAGCACCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIARAPS*WPAPFC
Trigger: ACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGCCCGTGCTCCCTCATaGTGGCCAGCACCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARARAPS*WPAPFC
Trigger: ACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGCCCTGTGGCTGATCTaGTCTGGACTAGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIALWLI*SGLGVQ
Trigger: CTGCACACCTAGTCCAGATCAGATCAGCCACAGGGC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCATTCGTCCAGGATGTaGGGCTCTTCCAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEHSSRM*GSSSWG
Trigger: CCCCCAACTGGAAGAGCCTCACATCCTGGACGAATG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCGCAGGTCCAGCATCCTaGATCCTAGGTGATGATATT +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLAGPAS*ILGDDI
Trigger: AATATCATCACCTAGGATTCAGGATGCTGGACCTGC...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCAGCTCATAGTTCCGTaGGCCCGCCTGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAQLIVP*ARLKWH
Trigger: GTGCCATTTCAGGCGGGCTCACGGAACTATGAGCTG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCAGCTCATAGTTCCGTaGGCCCGCCTGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEQLIVP*ARLKWH
Trigger: GTGCCATTTCAGGCGGGCTCACGGAACTATGAGCTG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTGAGGTCTTTGCTGGCTaGTGGTCTGGCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAEVFAG*WSGPLF
Trigger: GAAGAGAGGGCCAGACCATCAGCCAGCAAAGACCTC...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACAGGCAGAGGTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAACCTCTGCCT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGGCAGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATTGGTTGCTTCTCTCTaGGCCTTACTTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLVASL*ALLASS
Trigger: AGAGCTGGCAAGTAAGGCTCAGAGAGAAGCAACCAA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTAGCACCTCACAGAGCTaGGGCTCAGACAGCGCGATC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSTSQS*GSDSAI
Trigger: GATCGCGCTGTCTGAGCCGCAGCTCTGTGAGGTGCT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTCGGGCCCGGCCACCTaGAGCACCTCACAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSSGPAT*STSQSC
Trigger: GCAGCTCTGTGAGGTGCTGCAGGTGGCCGGGCCCGA...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATGCTGGTTACAAATCTaGTGCCGACCCTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTCWLQI*CRPSPL
Trigger: TAAGGGAGAGGGTCGGCAGCAGATTTGTAACCAGCA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACTTGAACACGGTGGCTaGTGGTTACAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLEHGG*WLQICC
Trigger: GCAGCAGATTTGTAACCAGCAGCCACCGTGTTCAAG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATATCGGGGTTCAGCCCGTaGTCCCTCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAISGFSP*SLMMAS
Trigger: GCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGA...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAAAGTGGTCACAGATGTaGAGTCTTGAACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTKWSQM*SLEHGG
Trigger: GCCACCGTGTTCAAGACTCCACATCTGTGACCACTT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTGGGACCGGAGGCAGTTaGGAAAACGACAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAGTGGS*ENDSSL
Trigger: GAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCC...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGAGGAGCTCTGGGCCCTaGGGGATTCTTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSERSSGP*GILLHV
Trigger: CACATGCAGAAGAATCCCCCAGGGCCCAGAGCTCCT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAGGAGCTCTGGGCCCTaGGGGATTCTTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIRSSGP*GILLHV
Trigger: CACATGCAGAAGAATCCCCCAGGGCCCAGAGCTCCT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGGTAAGTGCTGCCTaGATTTCCATGCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLKVSAA*ISMQEV
Trigger: GACCTCTTGCATGGAAATCCAGGCAGCACTTACCTT...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGGCGGCAGGTAGCGTaGGAGAAAACACAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGRQVA*EKTQSF
Trigger: GAAAGACTGTGTTTTCTCCCACGCTACCTGCCGCCC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTCTGTGCCCTTTCTGGTaGTCACAGCTTCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPLCPFW*SQLQVF
Trigger: AAACACCTGAAGCTGTGACCACCAGAAAGGGCACAG...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTAGCCTGTGCCCTTTCTaGTGGTCACAGCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSSLCPF*WSQLQV
Trigger: CACCTGAAGCTGTGACCACCAGAAAGGGCACAGGCT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCTGCGATTCTGCCAGTaGCCTGGACATCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDILRFCQ*PGHLGK
Trigger: CTTCCCGAGATGTCCAGGCCACTGGCAGAATCGCAG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCTGCGATTCTGCCAGTaGCCTGGACATCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEALRFCQ*PGHLGK
Trigger: CTTCCCGAGATGTCCAGGCCACTGGCAGAATCGCAG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCGAAGACAGAATTGGCTaGCTTGGTGACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSEDRIG*LGDRRR
Trigger: CCTTCTTCTGTCACCAAGCCAGCCAATTCTGTCTTC...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTACTCCCAGCACTGAGTaGATGCAGCCAGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEATPSTE*MQPGRT
Trigger: CGTTCTCCCTGGCTGCATCCACTCAGTGCTGGGAGT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAGCATGCTGCTGGGCTaGGCATCAGGCGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAISMLLG*ASGVAQ
Trigger: CTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTAACAGATGTGGAGTCTTaGACACGGTGGCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLTDVES*TRWLLV
Trigger: AACCAGCAGCCACCGTGTTCAAGACTCCACATCTGT...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGACAGTTCCCTCGGGTaGAGTGGTCACAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEDSSLG*SGHRCG
Trigger: TCCACATCTGTGACCACTTCACCCGAGGGAACTGTC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTACATGTTTCTACGATGTaGAGAAGGAGCTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLHVSTM*RRSSGP
Trigger: GGGCCCAGAGCTCCTTCTTCACATCGTAGAAACATG...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCCTCTCAGCAGACGCTaGAGCAGACGCAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSPLSRR*SRRKKF
Trigger: GAATTTCTTGCGTCTGCTTCAGCGTCTGCTGAGAGG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGCCCTGTGGCTGATCTaGTCTGGACTAGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARALWLI*SGLGVQ
Trigger: CTGCACACCTAGTCCAGATCAGATCAGCCACAGGGC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCATTCGTCCAGGATGTaGGGCTCTTCCAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIHSSRM*GSSSWG
Trigger: CCCCCAACTGGAAGAGCCTCACATCCTGGACGAATG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCCAGGCTGGATGTCCTaGGTTCCACTTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWPGWMS*VPLLPL
Trigger: CAATGGCAAAAGTGGAACTCAGGACATCCAGCCTGG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCGATGATATTTCTCTGTaGCCGCTGCTAGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSDDISL*PLLVLL
Trigger: CAAAAGCACTAGCAGCGGTCACAGAGAAATATCATC...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGCAGGTCCAGCATCCTaGATCCTAGGTGATGATATT +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTAGPAS*ILGDDI
Trigger: AATATCATCACCTAGGATTCAGGATGCTGGACCTGC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAAAAATCCATTTGGTGGTaGAGACAGAATTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHEKSIWW*RQNWLA
Trigger: AGCCAGCCAATTCTGTCTTCACCACCAAATGGATTT...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATATTCCGTGAGCCCGCCTaGAATGGCACAACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIFREPA*NGTTPL
Trigger: GAGGGGAGTTGTGCCATTTCAGGCGGGCTCACGGAA...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCATTCCGTGAGCCCGCCTaGAATGGCACAACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSFREPA*NGTTPL
Trigger: GAGGGGAGTTGTGCCATTTCAGGCGGGCTCACGGAA...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTTCCGTGAGCCCGCCTaGAATGGCACAACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYFREPA*NGTTPL
Trigger: GAGGGGAGTTGTGCCATTTCAGGCGGGCTCACGGAA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTGCTGCACATACCACTaGGGCACAAATGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPCCTYH*GTNVGL
Trigger: AAGACCAACATTTGTGCCTCAGTGGTATGTGCAGCA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGCTGACGCCCAGAAATaGTTTCATTGGCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWADAQK*FHWHGV
Trigger: CACCCCATGCCAATGAAATCATTTCTGGGCGTCAGC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGGCAGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCTGAGCTCAGGAGTTTaGGACCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARLSSGV*DQPGQH
Trigger: GTGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCAGGAAAGGGCAGCAGGTaGCTGAGGCAGAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSGKGSR*LRQSAD
Trigger: GTCAGCACTCTGCCTCAGTCACCTGCTGCCCTTTCC...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460845.5
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTTGAGTTTGCAGAGATaGAGGTTATCGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPLSLQR*RLSQGL
Trigger: GAGACCCTGCGATAACCTGCATCTCTGCAAACTCAA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTCGGGGTTCAGCCCGTaGTCCCTCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCSGFSP*SLMMAS
Trigger: GCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGA...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGCATGTGCTTGCTGTTaGAGATGTCCTGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPACACC*RCPGCS
Trigger: AGAACATCCAGGACATCTGCAACAGCAAGCACATGC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTCTTCTGCATGTGCTTaGTGTTGCAGATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPSSACA*CCRCPG
Trigger: TCCAGGACATCTGCAACAGCAAGCACATGCAGAAGA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGGATTCTTCTGCATGTaGTTGCTGTTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTGFFCM*LLLQMS
Trigger: GGACATCTGCAACAGCAAGCACATGCAGAAGAATCC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCATCATCTGCGATTCTaGCAGTGGCCTGGACATCTC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSHHLRF*QWPGHL
Trigger: GAGATGTCCAGGCCACTGGCAGAATCGCAGATGATG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTAAACAGGAACCTGGGTaGAGTTCTGCCCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPKQEPG*SSALGP
Trigger: GGGCCCAAGGGCAGAACTGCACCCAGGTTCCTGTTT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR GCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACTGTCAGCAAACAGCTaGTTCAGAACACTTACTCTG +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHELSANS*FRTLTL
Trigger: CAGAGTAAGTGTTCTGAAGCAGCTGTTTGCTGACAG...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGGCCGCAAGGGCAACTaGGTGGAAAGAAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIGRKGN*VERKRT
Trigger: CGTTCTCTTTCTTTCCACCCAGTTGCCCTTGCGGCC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTTATCGCAGGGTCTCTaGCAGTACTTGCGACGGCAG +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSELSQGL*QYLRRQ
Trigger: CTGCCGTCGCAAGTACTGCCAGAGACCCTGCGATAA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGAACACGGTGGCTGCTaGTTACAAATCTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWEHGGC*LQICCR
Trigger: TCGGCAGCAGATTTGTAACCAGCAGCCACCGTGTTC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCAGGAGCTCTGGGCCCTaGGGGATTCTTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LQSILSLTKTLALTASSSRSSGP*GILLHV
Trigger: CACATGCAGAAGAATCCCCCAGGGCCCAGAGCTCCT...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTAGGAGCTCTGGGCCCTaGGGGATTCTTCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIRSSGP*GILLHV
Trigger: CACATGCAGAAGAATCCCCCAGGGCCCAGAGCTCCT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAAAGGTAAGTGCTGCCTaGATTTCCATGCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTKVSAA*ISMQEV
Trigger: GACCTCTTGCATGGAAATCCAGGCAGCACTTACCTT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGGGCTGATGTTGAATTaGAAGCAAGGTAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPGLMLN*KQGKCC
Trigger: GCAGCACTTACCTTGCTTCCAATTCAACATCAGCCC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGGGCGGCAGGTAGCGTaGGAGAAAACACAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIGRQVA*EKTQSF
Trigger: GAAAGACTGTGTTTTCTCCCACGCTACCTGCCGCCC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAGCCTGTGCCCTTTCTaGTGGTCACAGCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEASLCPF*WSQLQV
Trigger: CACCTGAAGCTGTGACCACCAGAAAGGGCACAGGCT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGATTCTGCCAGTGGCCTaGACATCTCGGGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEILPVA*TSREAG
Trigger: ACCTGCTTCCCGAGATGTCCAGGCCACTGGCAGAAT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCAACAAGTGCTACTCTTaGGTCAGCATCATCTGCGAT +
Preference number: 4 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLNKCYS*VSIICD
Trigger: ATCGCAGATGATGCTGACCCAAGAGTAGCACTTGTT...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGACAGTTCCCTCGGGTaGAGTGGTCACAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIDSSLG*SGHRCG
Trigger: TCCACATCTGTGACCACTTCACCCGAGGGAACTGTC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTGCCCGTGCTCCCTCATaGTGGCCAGCACCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSARAPS*WPAPFC
Trigger: ACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGC...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCCCTGTGGCTGATCTaGTCTGGACTAGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIALWLI*SGLGVQ
Trigger: CTGCACACCTAGTCCAGATCAGATCAGCCACAGGGC...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTGGCCGAGCGCGATCCTaGCTCCCCAGATACGTGAAC +
Preference number: 4 (lower is better)
Translates to: FQKENSFSDLVSFQSHHAGRARS*LPRYVN
Trigger: GTTCACGTATCTGGGGAGTCAGGATCGCGCTCGGCC...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCCATTCGTCCAGGATGTaGGGCTCTTCCAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASHSSRM*GSSSWG
Trigger: CCCCCAACTGGAAGAGCCTCACATCCTGGACGAATG...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTAAATCCATTTGGTGGTaGAGACAGAATTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPKSIWW*RQNWLA
Trigger: AGCCAGCCAATTCTGTCTTCACCACCAAATGGATTT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCTTCTCTTCTCCATACTaGATCCATGTGCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSFSSPY*IHVPDS
Trigger: TGAATCTGGCACATGGATTCAGTATGGAGAAGAGAA...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCCAGCTCATAGTTCCGTaGGCCCGCCTGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASQLIVP*ARLKWH
Trigger: GTGCCATTTCAGGCGGGCTCACGGAACTATGAGCTG...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGAGGTCTTTGCTGGCTaGTGGTCTGGCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYEVFAG*WSGPLF
Trigger: GAAGAGAGGGCCAGACCATCAGCCAGCAAAGACCTC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTAAGCAAAAGTCCTCCTaGGGACGAAAGGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSKQKSS*GRKVAV
Trigger: AACTGCGACCTTTCGTCCTCAGGAGGACTTTTGCTT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTTGGTTGCTTCTCTCTaGGCCTTACTTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWLVASL*ALLASS
Trigger: AGAGCTGGCAAGTAAGGCTCAGAGAGAAGCAACCAA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCTCAGATAAAGAATACTaGGCAGAGCCTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSSDKEY*AEPVVF
Trigger: GAAGACAACAGGCTCTGCTCAGTATTCTTTATCTGA...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460845.5
CDS-3UTR GCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCAGCACCTCACAGAGCTaGGGCTCAGACAGCGCGATC +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCSTSQS*GSDSAI
Trigger: GATCGCGCTGTCTGAGCCGCAGCTCTGTGAGGTGCT...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCATCATCTGCGATTCTaGCAGTGGCCTGGACATCTC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIHHLRF*QWPGHL
Trigger: GAGATGTCCAGGCCACTGGCAGAATCGCAGATGATG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTGGGTCAGCATCATCTaGGATTCTGCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIWVSII*DSASGL
Trigger: CAGGCCACTGGCAGAATCGCAGATGATGCTGACCCA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTGGGTCAGCATCATCTaGGATTCTGCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARWVSII*DSASGL
Trigger: CAGGCCACTGGCAGAATCGCAGATGATGCTGACCCA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTGGGTCAGCATCATCTaGGATTCTGCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPWVSII*DSASGL
Trigger: CAGGCCACTGGCAGAATCGCAGATGATGCTGACCCA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTATCGATCGTCTCCATGTaGTCAAAGTCCGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLSIVSM*SKSVQV
Trigger: AACCTGGACGGACTTTGAGCACATGGAGACGATCGA...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGGTTCTTGGCTCACTTaGCAAGACTACAATAGCACT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPGSWLT*QDYNST
Trigger: AGTGCTATTGTAGTCTTGGCAAGTGAGCCAAGAACC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTCAGTGTACAAAGCATaGTGCTGGGCTGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDISVYKA*CWAGHQ
Trigger: CTGATGCCCAGCCCAGCAGCATGCTTTGTACACTGA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTATCGCAGGGTCTCTaGCAGTACTTGCGACGGCAG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSILSQGL*QYLRRQ
Trigger: CTGCCGTCGCAAGTACTGCCAGAGACCCTGCGATAA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGAACACGGTGGCTGCTaGTTACAAATCTGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIEHGGC*LQICCR
Trigger: TCGGCAGCAGATTTGTAACCAGCAGCCACCGTGTTC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTAAGTGGTCACAGATGTaGAGTCTTGAACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSKWSQM*SLEHGG
Trigger: GCCACCGTGTTCAAGACTCCACATCTGTGACCACTT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTCTGTCCATCAGGTTATaGGACCGGAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPLSIRL*DRRQLG
Trigger: TCCCAACTGCCTCCGGTCCCATAACCTGATGGACAG...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCTGTCCATCAGGTTATaGGACCGGAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARLSIRL*DRRQLG
Trigger: TCCCAACTGCCTCCGGTCCCATAACCTGATGGACAG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTATGTCCTGGATGTTCTaGACCACGTCGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIMSWMF*TTSGFS
Trigger: GCTGAACCCCGACGTGGTCCAGAACATCCAGGACAT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTATGTCCTGGATGTTCTaGACCACGTCGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARMSWMF*TTSGFS
Trigger: GCTGAACCCCGACGTGGTCCAGAACATCCAGGACAT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGTGAAGAAGGAGCTCTaGGCCCTGGGGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIVKKEL*ALGDSS
Trigger: AGAAGAATCCCCCAGGGCCCAGAGCTCCTTCTTCAC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTTTCTCCTGGCGCCTTaGTCATTCGTCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAFLLAP*SFVQDV
Trigger: CACATCCTGGACGAATGACCAAGGCGCCAGGAGAAA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCTGTGCCCTTTCTGGTaGTCACAGCTTCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSLCPFW*SQLQVF
Trigger: AAACACCTGAAGCTGTGACCACCAGAAAGGGCACAG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTATTCTGCCAGTGGCCTaGACATCTCGGGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARILPVA*TSREAG
Trigger: ACCTGCTTCCCGAGATGTCCAGGCCACTGGCAGAAT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCTGCGATTCTGCCAGTaGCCTGGACATCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYLRFCQ*PGHLGK
Trigger: CTTCCCGAGATGTCCAGGCCACTGGCAGAATCGCAG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTGGAGAGGCGTCGGATaGGAAAGGAATCACAACTCA +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSWRGVG*ERNHNS
Trigger: TGAGTTGTGATTCCTTTCCCATCCGACGCCTCTCCA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTGCTGGCTGATGGTCTaGCCCTCTCTTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPCWLMV*PSLHLL
Trigger: CAGCAGATGAAGAGAGGGCCAGACCATCAGCCAGCA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTGCTGGCTGATGGTCTaGCCCTCTCTTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARCWLMV*PSLHLL
Trigger: CAGCAGATGAAGAGAGGGCCAGACCATCAGCCAGCA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTACAGCTGTCGAACTGTaGAGGAGGGCTCGTGTACGT +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPTAVEL*RRARVR
Trigger: ACGTACACGAGCCCTCCTCCACAGTTCGACAGCTGT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCGGAGGGATTCGATCTaGTATCCACACAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEARRDSI*YPHSCR
Trigger: TCGACAGCTGTGTGGATACCAGATCGAATCCCTCCG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGAGGAAACAGGAACCTaGGTGCAGTTCTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQAREETGT*VQFCPW
Trigger: CCAAGGGCAGAACTGCACCCAGGTTCCTGTTTCCTC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAACCGGCCCAGCAAGTTaGGTTTGCAGAGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAITGPAS*VCRDAG
Trigger: ACCTGCATCTCTGCAAACTCAACTTGCTGGGCCGGT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTAGTCCAGAGAGTTCGTaGTTTTTCAGGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPSPESS*FFRTLK
Trigger: CTTCAAAGTCCTGAAAAATCACGAACTCTCTGGACT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAAGTCCAGAGAGTTCGTaGTTTTTCAGGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTSPESS*FFRTLK
Trigger: CTTCAAAGTCCTGAAAAATCACGAACTCTCTGGACT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTACAGATGTGGAGTCTTaGACACGGTGGCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSITDVES*TRWLLV
Trigger: AACCAGCAGCCACCGTGTTCAAGACTCCACATCTGT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGACAGTTCCCTCGGGTaGAGTGGTCACAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYDSSLG*SGHRCG
Trigger: TCCACATCTGTGACCACTTCACCCGAGGGAACTGTC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGGACAGTTCCCTCGGGTaGAGTGGTCACAGATGTGGA +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENRDSSLG*SGHRCG
Trigger: TCCACATCTGTGACCACTTCACCCGAGGGAACTGTC...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCATGTTTCTACGATGTaGAGAAGGAGCTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARHVSTM*RRSSGP
Trigger: GGGCCCAGAGCTCCTTCTTCACATCGTAGAAACATG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTGCCCTGTGGCTGATCTaGTCTGGACTAGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSALWLI*SGLGVQ
Trigger: CTGCACACCTAGTCCAGATCAGATCAGCCACAGGGC...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTGCAAGAGGTCCTCTTaGCTGCCGTTCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWCKRSS*LPFSKN
Trigger: GTTTTTAGAGAACGGCAGTCAAGAGGACCTCTTGCA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTGCAAGAGGTCCTCTTaGCTGCCGTTCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSCKRSS*LPFSKN
Trigger: GTTTTTAGAGAACGGCAGTCAAGAGGACCTCTTGCA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCCCAGGCTGGATGTCCTaGGTTCCACTTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: LQSILSLTKTLALTASSSPGWMS*VPLLPL
Trigger: CAATGGCAAAAGTGGAACTCAGGACATCCAGCCTGG...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCCAGGCTGGATGTCCTaGGTTCCACTTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIPGWMS*VPLLPL
Trigger: CAATGGCAAAAGTGGAACTCAGGACATCCAGCCTGG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGCAGGTCCAGCATCCTaGATCCTAGGTGATGATATT +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWAGPAS*ILGDDI
Trigger: AATATCATCACCTAGGATTCAGGATGCTGGACCTGC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAATTTCCTCTGAGTCATaGTCATCCACCCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTISSES*SSTLED
Trigger: ATCTTCTAGGGTGGATGATCATGACTCAGAGGAAAT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAATTGGCTGGCTTGGTaGCAGAAGAAGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEANWLAW*QKKEWR
Trigger: TCTCCACTCCTTCTTCTGTCACCAAGCCAGCCAATT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATTCTCTTCTCCATACTaGATCCATGTGCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTFSSPY*IHVPDS
Trigger: TGAATCTGGCACATGGATTCAGTATGGAGAAGAGAA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCCAGCTCATAGTTCCGTaGGCCCGCCTGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCQLIVP*ARLKWH
Trigger: GTGCCATTTCAGGCGGGCTCACGGAACTATGAGCTG...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAAGCAAAAGTCCTCCTaGGGACGAAAGGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAKQKSS*GRKVAV
Trigger: AACTGCGACCTTTCGTCCTCAGGAGGACTTTTGCTT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTGCTGACGCCCAGAAATaGTTTCATTGGCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPADAQK*FHWHGV
Trigger: CACCCCATGCCAATGAAATCATTTCTGGGCGTCAGC...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCACTCCAGATTCACGAGTaGCTTGATGAGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSLQIHE*LDEPRA
Trigger: TGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAG...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCCCTCATGAGAATATTTaGATAAATTCCGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSPHENI*INSART
Trigger: AGTCCGAGCGGAATTTATGCAAATATTCTCATGAGG...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTGCTGGTTACAAATCTaGTGCCGACCCTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEACWLQI*CRPSPL
Trigger: TAAGGGAGAGGGTCGGCAGCAGATTTGTAACCAGCA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTCTTCTGCATGTGCTTaGTGTTGCAGATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWSSACA*CCRCPG
Trigger: TCCAGGACATCTGCAACAGCAAGCACATGCAGAAGA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTCCTGGGGGATTCTTCTaGATGTGCTTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPPGGFF*MCLLLQ
Trigger: CTGCAACAGCAAGCACATGCAGAAGAATCCCCCAGG...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCAGGAAAGCAAGCCTGTaGCCTTTCTGGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: LQSILSLTKTLALTASSSRKASL*PFWWSQ
Trigger: CTGTGACCACCAGAAAGGGCACAGGCTTGCTTTCCT...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTGGGTCAGCATCATCTaGGATTCTGCCAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASWVSII*DSASGL
Trigger: CAGGCCACTGGCAGAATCGCAGATGATGCTGACCCA...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAAGAATCGTTAACAAGTaGTACTCTTGGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTRIVNK*YSWVSI
Trigger: GATGCTGACCCAAGAGTAGCACTTGTTAACGATTCT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000680309.1
CDS-3UTR GCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTTCATTGGCATGGGGTaGAACCTGGGCATCAGAATT +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSFIGMG*NLGIRI
Trigger: AATTCTGATGCCCAGGTTGCACCCCATGCCAATGAA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPLTPVG*FSLSLT
Trigger: AGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLTPVG*FSLSLT
Trigger: AGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCAAACAGGAACCTGGGTaGAGTTCTGCCCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCKQEPG*SSALGP
Trigger: GGGCCCAAGGGCAGAACTGCACCCAGGTTCCTGTTT...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460845.5
CDS-3UTR CCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGGGCCGCAAGGGCAACTaGGTGGAAAGAAAGAGAACG +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENRGRKGN*VERKRT
Trigger: CGTTCTCTTTCTTTCCACCCAGTTGCCCTTGCGGCC...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGAAGTGGTCACAGATGTaGAGTCTTGAACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEKWSQM*SLEHGG
Trigger: GCCACCGTGTTCAAGACTCCACATCTGTGACCACTT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGCTGTCCATCAGGTTATaGGACCGGAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENRLSIRL*DRRQLG
Trigger: TCCCAACTGCCTCCGGTCCCATAACCTGATGGACAG...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAATGTCCTGGATGTTCTaGACCACGTCGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIMSWMF*TTSGFS
Trigger: GCTGAACCCCGACGTGGTCCAGAACATCCAGGACAT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCATGTCCTGGATGTTCTaGACCACGTCGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASMSWMF*TTSGFS
Trigger: GCTGAACCCCGACGTGGTCCAGAACATCCAGGACAT...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGTGAAGAAGGAGCTCTaGGCCCTGGGGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYVKKEL*ALGDSS
Trigger: AGAAGAATCCCCCAGGGCCCAGAGCTCCTTCTTCAC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCGTGAAGAAGGAGCTCTaGGCCCTGGGGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASVKKEL*ALGDSS
Trigger: AGAAGAATCCCCCAGGGCCCAGAGCTCCTTCTTCAC...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTAAGGTAAGTGCTGCCTaGATTTCCATGCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSKVSAA*ISMQEV
Trigger: GACCTCTTGCATGGAAATCCAGGCAGCACTTACCTT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGGCTGATGTTGAATTaGAAGCAAGGTAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGLMLN*KQGKCC
Trigger: GCAGCACTTACCTTGCTTCCAATTCAACATCAGCCC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTTCTCCTGGCGCCTTaGTCATTCGTCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIFLLAP*SFVQDV
Trigger: CACATCCTGGACGAATGACCAAGGCGCCAGGAGAAA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGGGCGGCAGGTAGCGTaGGAGAAAACACAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYGRQVA*EKTQSF
Trigger: GAAAGACTGTGTTTTCTCCCACGCTACCTGCCGCCC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGAAGACAGAATTGGCTaGCTTGGTGACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWEDRIG*LGDRRR
Trigger: CCTTCTTCTGTCACCAAGCCAGCCAATTCTGTCTTC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACACAGCTGTCGAACTGTaGAGGAGGGCTCGTGTACGT +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYTAVEL*RRARVR
Trigger: ACGTACACGAGCCCTCCTCCACAGTTCGACAGCTGT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATTCTGCTTGAGCCAATaGGTAGATGGTGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTFCLSQ*VDGDAF
Trigger: AAAAGCATCACCATCTACCCATTGGCTCAAGCAGAA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAACAGATGTGGAGTCTTaGACACGGTGGCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAITDVES*TRWLLV
Trigger: AACCAGCAGCCACCGTGTTCAAGACTCCACATCTGT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAATTCTTGGCTGCCCTaGAAGAACCGATCTCTACTC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDINSWLP*KNRSLL
Trigger: GAGTAGAGATCGGTTCTTTCAGGGCAGCCAAGAATT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCCTCTCAGCAGACGCTaGAGCAGACGCAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYPLSRR*SRRKKF
Trigger: GAATTTCTTGCGTCTGCTTCAGCGTCTGCTGAGAGG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCCAGGCTGGATGTCCTaGGTTCCACTTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYPGWMS*VPLLPL
Trigger: CAATGGCAAAAGTGGAACTCAGGACATCCAGCCTGG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGATGATATTTCTCTGTaGCCGCTGCTAGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWDDISL*PLLVLL
Trigger: CAAAAGCACTAGCAGCGGTCACAGAGAAATATCATC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCAAGATGTGGTACTTGTaGCATCAGATAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSKMWYL*HQIKNR
Trigger: ACGATTCTTTATCTGATGTCACAAGTACCACATCTT...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTAATTGGCTGGCTTGGTaGCAGAAGAAGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPNWLAW*QKKEWR
Trigger: TCTCCACTCCTTCTTCTGTCACCAAGCCAGCCAATT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACTGATGACATCCTTTTaGGTTTTGGAAGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHELMTSF*VLEAMF
Trigger: AAACATAGCTTCCAAAACTCAAAAGGATGTCATCAG...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTTTATCCAGGAGCTCTaGGTTCTCGATCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPFIQEL*VLDLLY
Trigger: ATAAAGAAGATCGAGAACTCAGAGCTCCTGGATAAA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTATGGCATCCTTCTaGCGCTGTATTCATCGGTTC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIVMASF*RCIHRF
Trigger: GAACCGATGAATACAGCGTCAGAAGGATGCCATAAC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATATTGTTCTTTGTTCTaGTTCTGTGCTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTYCSLF*FCAHQE
Trigger: TTCCTGGTGAGCACAGAATCAGAACAAAGAACAATA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTCTTGAACACGGTGGCTaGTGGTTACAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPLEHGG*WLQICC
Trigger: GCAGCAGATTTGTAACCAGCAGCCACCGTGTTCAAG...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTGCATGTGCTTGCTGTTaGAGATGTCCTGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAACACC*RCPGCS
Trigger: AGAACATCCAGGACATCTGCAACAGCAAGCACATGC...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCACCTGGGGGATTCTTCTaGATGTGCTTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSPGGFF*MCLLLQ
Trigger: CTGCAACAGCAAGCACATGCAGAAGAATCCCCCAGG...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATACCTGGGGGATTCTTCTaGATGTGCTTGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIPGGFF*MCLLLQ
Trigger: CTGCAACAGCAAGCACATGCAGAAGAATCCCCCAGG...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAGGAAAGCAAGCCTGTaGCCTTTCTGGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIRKASL*PFWWSQ
Trigger: CTGTGACCACCAGAAAGGGCACAGGCTTGCTTTCCT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCATCATCTGCGATTCTaGCAGTGGCCTGGACATCTC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYHHLRF*QWPGHL
Trigger: GAGATGTCCAGGCCACTGGCAGAATCGCAGATGATG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCACATCATCTGCGATTCTaGCAGTGGCCTGGACATCTC +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSHHLRF*QWPGHL
Trigger: GAGATGTCCAGGCCACTGGCAGAATCGCAGATGATG...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTCGATCGTCTCCATGTaGTCAAAGTCCGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSIVSM*SKSVQV
Trigger: AACCTGGACGGACTTTGAGCACATGGAGACGATCGA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTTCATTGGCATGGGGTaGAACCTGGGCATCAGAATT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEFIGMG*NLGIRI
Trigger: AATTCTGATGCCCAGGTTGCACCCCATGCCAATGAA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTTCCCTCGGGTGAAGTaGTCACAGATGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARFPRVK*SQMWSL
Trigger: AAGACTCCACATCTGTGACCACTTCACCCGAGGGAA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTGGGACCGGAGGCAGTTaGGAAAACGACAGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FQKENSFSDLVSFQSHHAGTGGS*ENDSSL
Trigger: GAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCC...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGGGCTGATGTTGAATTaGAAGCAAGGTAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEGLMLN*KQGKCC
Trigger: GCAGCACTTACCTTGCTTCCAATTCAACATCAGCCC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTTTCTCCTGGCGCCTTaGTCATTCGTCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASFLLAP*SFVQDV
Trigger: CACATCCTGGACGAATGACCAAGGCGCCAGGAGAAA...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTTTCTCCTGGCGCCTTaGTCATTCGTCCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYFLLAP*SFVQDV
Trigger: CACATCCTGGACGAATGACCAAGGCGCCAGGAGAAA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCTGGAGAGGCGTCGGATaGGAAAGGAATCACAACTCA +
Preference number: 4 (lower is better)
Translates to: LQSILSLTKTLALTASSSWRGVG*ERNHNS
Trigger: TGAGTTGTGATTCCTTTCCCATCCGACGCCTCTCCA...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATACGGAGGGATTCGATCTaGTATCCACACAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIRRDSI*YPHSCR
Trigger: TCGACAGCTGTGTGGATACCAGATCGAATCCCTCCG...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGGAACAGAATGGTTATaGCATCCTTCTGACGCTGTA +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWGTEWL*HPSDAV
Trigger: TACAGCGTCAGAAGGATGCCATAACCATTCTGTTCC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGAAGGAAGGAAATATTaGTCCAAGCACGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEEGRKY*SKHVKG
Trigger: GCCCTTGACGTGCTTGGACCAATATTTCCTTCCTTC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGCTGTTGGAAAGAGTTaGACAAACTGCACCCCTACA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIAVGKS*TNCTPT
Trigger: TGTAGGGGTGCAGTTTGTCCAACTCTTTCCAACAGC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGAAAGGAAGCCAGAGTaGCTTGCGCAGAAGAAACTA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIERKPE*LAQKKL
Trigger: TAGTTTCTTCTGCGCAAGCCACTCTGGCTTCCTTTC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR CAA 72 bp TACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTaGCTTCTCTCTGAGCCTTACTTGCCAGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: YKEPKWAINSSW*LLSEPYLPALI
Trigger: AATAAGAGCTGGCAAGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTAAGTCCAGAGAGTTCGTaGTTTTTCAGGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLSPESS*FFRTLK
Trigger: CTTCAAAGTCCTGAAAAATCACGAACTCTCTGGACT...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTAATTCTTGGCTGCCCTaGAAGAACCGATCTCTACTC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPNSWLP*KNRSLL
Trigger: GAGTAGAGATCGGTTCTTTCAGGGCAGCCAAGAATT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGATTTCCTCTGAGTCATaGTCATCCACCCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWISSES*SSTLED
Trigger: ATCTTCTAGGGTGGATGATCATGACTCAGAGGAAAT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCAATTGGCTGGCTTGGTaGCAGAAGAAGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASNWLAW*QKKEWR
Trigger: TCTCCACTCCTTCTTCTGTCACCAAGCCAGCCAATT...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAATTGGCTGGCTTGGTaGCAGAAGAAGGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAINWLAW*QKKEWR
Trigger: TCTCCACTCCTTCTTCTGTCACCAAGCCAGCCAATT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTCTGATGACATCCTTTTaGGTTTTGGAAGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPLMTSF*VLEAMF
Trigger: AAACATAGCTTCCAAAACTCAAAAGGATGTCATCAG...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTGCTGCACATACCACTaGGGCACAAATGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSICCTYH*GTNVGL
Trigger: AAGACCAACATTTGTGCCTCAGTGGTATGTGCAGCA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAAGCAAAAGTCCTCCTaGGGACGAAAGGTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIKQKSS*GRKVAV
Trigger: AACTGCGACCTTTCGTCCTCAGGAGGACTTTTGCTT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGATCTTTCTGAAAGATaGCAAAAACGGAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWDLSER*QKRRDS
Trigger: CGAATCCCTCCGTTTTTGTCATCTTTCAGAAAGATC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGTTATGGCATCCTTCTaGCGCTGTATTCATCGGTTC +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIVMASF*RCIHRF
Trigger: GAACCGATGAATACAGCGTCAGAAGGATGCCATAAC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTTTACCAGTTACATCTaGGACAAGGTAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPFTSYI*DKVNFP
Trigger: TGGAAAGTTTACCTTGTCTCAGATGTAACTGGTAAA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTTGGTTGCTTCTCTCTaGGCCTTACTTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYLVASL*ALLASS
Trigger: AGAGCTGGCAAGTAAGGCTCAGAGAGAAGCAACCAA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCTTACATACAGATCCTaGGAGAGGAACAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDILTYRS*ERNRFM
Trigger: CATGAACCTGTTCCTCTCTCAGGATCTGTATGTAAG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCGATGAGCCCAGGGCATaGACATCTCAAGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCDEPRA*TSQASV
Trigger: GACAGATGCTTGAGATGTTCATGCCCTGGGCTCATC...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTTGAGTTTGCAGAGATaGAGGTTATCGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPLSLQR*RLSQGL
Trigger: GAGACCCTGCGATAACCTGCATCTCTGCAAACTCAA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTGCTGGTTACAAATCTaGTGCCGACCCTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYCWLQI*CRPSPL
Trigger: TAAGGGAGAGGGTCGGCAGCAGATTTGTAACCAGCA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCTTGAACACGGTGGCTaGTGGTTACAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYLEHGG*WLQICC
Trigger: GCAGCAGATTTGTAACCAGCAGCCACCGTGTTCAAG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTCTTCTGCATGTGCTTaGTGTTGCAGATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSSACA*CCRCPG
Trigger: TCCAGGACATCTGCAACAGCAAGCACATGCAGAAGA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTGGATTCTTCTGCATGTaGTTGCTGTTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPGFFCM*LLLQMS
Trigger: GGACATCTGCAACAGCAAGCACATGCAGAAGAATCC...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCGATCGTCTCCATGTaGTCAAAGTCCGTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASSIVSM*SKSVQV
Trigger: AACCTGGACGGACTTTGAGCACATGGAGACGATCGA...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTCTCTGAGCCTTACTTaGCAGCTCTTATTACCGCAT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSESLSLT*QLLLPH
Trigger: ATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCTTAGACATACTCACTaGAGCCCAAGGAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSILRHTH*SPRRNL
Trigger: CAGATTCCTCCTTGGGCTGCAGTGAGTATGTCTAAG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680309.1
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAGCAAGGGCAACTGGGTaGAAAGAAAGAGAACGCGCG +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIARATG*KERERA
Trigger: CGCGCGTTCTCTTTCTTTCCACCCAGTTGCCCTTGC...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATATTCCCTCGGGTGAAGTaGTCACAGATGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIFPRVK*SQMWSL
Trigger: AAGACTCCACATCTGTGACCACTTCACCCGAGGGAA...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACTGTCCATCAGGTTATaGGACCGGAGGCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCILSIRL*DRRQLG
Trigger: TCCCAACTGCCTCCGGTCCCATAACCTGATGGACAG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTAAGGTAAGTGCTGCCTaGATTTCCATGCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPKVSAA*ISMQEV
Trigger: GACCTCTTGCATGGAAATCCAGGCAGCACTTACCTT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTGGGCGGCAGGTAGCGTaGGAGAAAACACAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKSLQSILSLTKTLALTAGRQVA*EKTQSF
Trigger: GAAAGACTGTGTTTTCTCCCACGCTACCTGCCGCCC...AGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATACTGTGCCCTTTCTGGTaGTCACAGCTTCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAILCPFW*SQLQVF
Trigger: AAACACCTGAAGCTGTGACCACCAGAAAGGGCACAG...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCACTGTGCCCTTTCTGGTaGTCACAGCTTCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSLCPFW*SQLQVF
Trigger: AAACACCTGAAGCTGTGACCACCAGAAAGGGCACAG...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAACAAGTGCTACTCTTaGGTCAGCATCATCTGCGAT +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEANKCYS*VSIICD
Trigger: ATCGCAGATGATGCTGACCCAAGAGTAGCACTTGTT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTGGAGAGGCGTCGGATaGGAAAGGAATCACAACTCA +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYWRGVG*ERNHNS
Trigger: TGAGTTGTGATTCCTTTCCCATCCGACGCCTCTCCA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATATGGAGAGGCGTCGGATaGGAAAGGAATCACAACTCA +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIWRGVG*ERNHNS
Trigger: TGAGTTGTGATTCCTTTCCCATCCGACGCCTCTCCA...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTGAAGACAGAATTGGCTaGCTTGGTGACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPEDRIG*LGDRRR
Trigger: CCTTCTTCTGTCACCAAGCCAGCCAATTCTGTCTTC...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGAAGGAAGGAAATATTaGTCCAAGCACGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIEGRKY*SKHVKG
Trigger: GCCCTTGACGTGCTTGGACCAATATTTCCTTCCTTC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTGGTTTCATAATAACTaGGGACTACTCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAWFHNN*GLLPAL
Trigger: CAGTGCTGGGAGTAGTCCCCAGTTATTATGAAACCA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATACAGTGGTTCTCACTGTaGTCAGTGGGTTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIQWFSL*SVGYWW
Trigger: CCACCAATAACCCACTGACCACAGTGAGAACCACTG...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTGAGGAAACAGGAACCTaGGTGCAGTTCTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FQKENSFSDLVSFQSHHAEETGT*VQFCPW
Trigger: CCAAGGGCAGAACTGCACCCAGGTTCCTGTTTCCTC...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460845.5
CDS-3UTR TCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAACAGATGTGGAGTCTTaGACACGGTGGCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCITDVES*TRWLLV
Trigger: AACCAGCAGCCACCGTGTTCAAGACTCCACATCTGT...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACATGTTTCTACGATGTaGAGAAGGAGCTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIHVSTM*RRSSGP
Trigger: GGGCCCAGAGCTCCTTCTTCACATCGTAGAAACATG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCCCTCTCAGCAGACGCTaGAGCAGACGCAAGAAATTC +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSPLSRR*SRRKKF
Trigger: GAATTTCTTGCGTCTGCTTCAGCGTCTGCTGAGAGG...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTGCAAGAGGTCCTCTTaGCTGCCGTTCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYCKRSS*LPFSKN
Trigger: GTTTTTAGAGAACGGCAGTCAAGAGGACCTCTTGCA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTGCAAGAGGTCCTCTTaGCTGCCGTTCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASCKRSS*LPFSKN
Trigger: GTTTTTAGAGAACGGCAGTCAAGAGGACCTCTTGCA...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGATGATATTTCTCTGTaGCCGCTGCTAGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARDDISL*PLLVLL
Trigger: CAAAAGCACTAGCAGCGGTCACAGAGAAATATCATC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTAAATCCATTTGGTGGTaGAGACAGAATTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARKSIWW*RQNWLA
Trigger: AGCCAGCCAATTCTGTCTTCACCACCAAATGGATTT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTTCTCTTCTCCATACTaGATCCATGTGCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIFSSPY*IHVPDS
Trigger: TGAATCTGGCACATGGATTCAGTATGGAGAAGAGAA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGAAGCTATGTTTGTCTaGATCATCCCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIEAMFV*IIPWKL
Trigger: GAGTTTCCAAGGGATGATTCAGACAAACATAGCTTC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGTGCTGCACATACCACTaGGGCACAAATGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENRCCTYH*GTNVGL
Trigger: AAGACCAACATTTGTGCCTCAGTGGTATGTGCAGCA...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTTTATCCAGGAGCTCTaGGTTCTCGATCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSFIQEL*VLDLLY
Trigger: ATAAAGAAGATCGAGAACTCAGAGCTCCTGGATAAA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGATGAAAAGCCTGACCTaGGAAAAAGCCTTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEMKSLT*EKAFSV
Trigger: TACAGAGAAGGCTTTTTCTCAGGTCAGGCTTTTCAT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTATGAAAAGCCTGACCTaGGAAAAAGCCTTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAMKSLT*EKAFSV
Trigger: TACAGAGAAGGCTTTTTCTCAGGTCAGGCTTTTCAT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTATGAAAAGCCTGACCTaGGAAAAAGCCTTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIMKSLT*EKAFSV
Trigger: TACAGAGAAGGCTTTTTCTCAGGTCAGGCTTTTCAT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTATTGTTCTTTGTTCTaGTTCTGTGCTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWYCSLF*FCAHQE
Trigger: TTCCTGGTGAGCACAGAATCAGAACAAAGAACAATA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAATCAAAGATGCCTGTaGAATATCCAGCTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEANQRCL*NIQLVV
Trigger: CACCACTAGCTGGATATTTCACAGGCATCTTTGATT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCTAGCATTTAGTATGTaGGAGCCAAGTATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSELAFSM*EPSMQN
Trigger: GTTCTGCATACTTGGCTCTCACATACTAAATGCTAG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTCAGATAAAGAATACTaGGCAGAGCCTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDISDKEY*AEPVVF
Trigger: GAAGACAACAGGCTCTGCTCAGTATTCTTTATCTGA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR TCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCGATGAGCCCAGGGCATaGACATCTCAAGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSDEPRA*TSQASV
Trigger: GACAGATGCTTGAGATGTTCATGCCCTGGGCTCATC...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGCATGTGCTTGCTGTTaGAGATGTCCTGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYACACC*RCPGCS
Trigger: AGAACATCCAGGACATCTGCAACAGCAAGCACATGC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGGCATGTGCTTGCTGTTaGAGATGTCCTGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENRACACC*RCPGCS
Trigger: AGAACATCCAGGACATCTGCAACAGCAAGCACATGC...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAGAATCGTTAACAAGTaGTACTCTTGGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEARIVNK*YSWVSI
Trigger: GATGCTGACCCAAGAGTAGCACTTGTTAACGATTCT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000680309.1
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGATAAGGTACAGTACTaGAGCCATGTCTGCAATAGC +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIDKVQY*SHVCNS
Trigger: GCTATTGCAGACATGGCTGCAGTACTGTACCTTATC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTGATAAGGTACAGTACTaGAGCCATGTCTGCAATAGC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPDKVQY*SHVCNS
Trigger: GCTATTGCAGACATGGCTGCAGTACTGTACCTTATC...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTCTCTGAGCCTTACTTaGCAGCTCTTATTACCGCAT +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSLSLT*QLLLPH
Trigger: ATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGGTTCTTGGCTCACTTaGCAAGACTACAATAGCACT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARGSWLT*QDYNST
Trigger: AGTGCTATTGTAGTCTTGGCAAGTGAGCCAAGAACC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTTTTGTTCTGATTCTGTaGTCACCAGGAAACAAATTT +
Preference number: 4 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPFVLIL*SPGNKF
Trigger: AAATTTGTTTCCTGGTGAGCACAGAATCAGAACAAA...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTTTACCGTTAACAAGTaGTACTCTTGGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEFTVNK*YSWVSI
Trigger: GATGCTGACCCAAGAGTAGCACTTGTTAACGGTAAA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR GCA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACCTCATGAGAATATTTaGATAAATTCCTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTPHENI*INSFQK
Trigger: CTTCTGGAAGGAATTTATGCAAATATTCTCATGAGG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680309.1
CDS-3UTR CCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCAAGTGGTCACAGATGTaGAGTCTTGAACACGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCKWSQM*SLEHGG
Trigger: GCCACCGTGTTCAAGACTCCACATCTGTGACCACTT...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCGGGCTGATGTTGAATTaGAAGCAAGGTAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASGLMLN*KQGKCC
Trigger: GCAGCACTTACCTTGCTTCCAATTCAACATCAGCCC...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGAAGACAGAATTGGCTaGCTTGGTGACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIEDRIG*LGDRRR
Trigger: CCTTCTTCTGTCACCAAGCCAGCCAATTCTGTCTTC...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCAGAAGACAGAATTGGCTaGCTTGGTGACAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSEDRIG*LGDRRR
Trigger: CCTTCTTCTGTCACCAAGCCAGCCAATTCTGTCTTC...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTTTCCAACCAGAACTTaGGCTACAAACATAACGACG +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEFPTRT*ATNITT
Trigger: CGTCGTTATGTTTGTAGCCCAAGTTCTGGTTGGAAA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGACACAGGGCCTCTTTaGGATATTGTTCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIDTGPL*DIVLCS
Trigger: AGAACAAAGAACAATATCCCAAAGAGGCCCTGTGTC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGACACAGGGCCTCTTTaGGATATTGTTCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEDTGPL*DIVLCS
Trigger: AGAACAAAGAACAATATCCCAAAGAGGCCCTGTGTC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATATGTGAGGGAGGTAGATaGAGAGTTCCACTTTGGACA +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAICEGGR*RVPLWT
Trigger: TGTCCAAAGTGGAACTCTCCATCTACCTCCCTCACA...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR CAA 72 bp TTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTaGTTTAAAACCTCCCAGATGATTCTAATATGTAGC +
Preference number: 4 (lower is better)
Translates to: FHWHGVQPGHQN*FKTSQMILICS
Trigger: GCTACATATTAGAATCATCTGGGAGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTTTGAAGTTCTCTTCTaGGAGAACCTCATGAGAATA +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWFEVLF*ENLMRI
Trigger: TATTCTCATGAGGTTCTCTCAGAAGAGAACTTCAAA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTAATTCTTGGCTGCCCTaGAAGAACCGATCTCTACTC +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSNSWLP*KNRSLL
Trigger: GAGTAGAGATCGGTTCTTTCAGGGCAGCCAAGAATT...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTAAGATGTGGTACTTGTaGCATCAGATAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSKMWYL*HQIKNR
Trigger: ACGATTCTTTATCTGATGTCACAAGTACCACATCTT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000680309.1
CDS-3UTR TCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGAAGATGTGGTACTTGTaGCATCAGATAAAGAATCGT +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWKMWYL*HQIKNR
Trigger: ACGATTCTTTATCTGATGTCACAAGTACCACATCTT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTATTTCCTCTGAGTCATaGTCATCCACCCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPISSES*SSTLED
Trigger: ATCTTCTAGGGTGGATGATCATGACTCAGAGGAAAT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTAAGACAAATTTCCTCTaGGTCATGATCATCCACCCT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIKTNFL*VMIIHP
Trigger: AGGGTGGATGATCATGACTCAGAGGAAATTTGTCTT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCTTCTCTTCTCCATACTaGATCCATGTGCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: LQSILSLTKTLALTASSSFSSPY*IHVPDS
Trigger: TGAATCTGGCACATGGATTCAGTATGGAGAAGAGAA...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGAAGCTATGTTTGTCTaGATCATCCCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIEAMFV*IIPWKL
Trigger: GAGTTTCCAAGGGATGATTCAGACAAACATAGCTTC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTGCTGCACATACCACTaGGGCACAAATGTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCCCTYH*GTNVGL
Trigger: AAGACCAACATTTGTGCCTCAGTGGTATGTGCAGCA...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTATTCTGGATGTAGGTaGTGGATCTCTGACAACTTA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIYSGCR*WISDNL
Trigger: TAAGTTGTCAGAGATCCATCACCTACATCCAGAATA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTTTATCCAGGAGCTCTaGGTTCTCGATCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEFIQEL*VLDLLY
Trigger: ATAAAGAAGATCGAGAACTCAGAGCTCCTGGATAAA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGATCTTTCTGAAAGATaGCAAAAACGGAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIDLSER*QKRRDS
Trigger: CGAATCCCTCCGTTTTTGTCATCTTTCAGAAAGATC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGATCTTTCTGAAAGATaGCAAAAACGGAGGGATTCG +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARDLSER*QKRRDS
Trigger: CGAATCCCTCCGTTTTTGTCATCTTTCAGAAAGATC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTCAGTTATGCTTGTGTaGAGCTGGTTATTGCAATTC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEASVMLV*SWLLQF
Trigger: GAATTGCAATAACCAGCTTCACACAAGCATAACTGA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAACAGGAAACTTTGGTaGCTGGTAAGGAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDINRKLW*LVRNVE
Trigger: TTCAACATTCCTTACCAGTCACCAAAGTTTCCTGTT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCCACTTTGGACATATTaGATCAAAGATGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAPLWTY*IKDACE
Trigger: TTCACAGGCATCTTTGATTCAATATGTCCAAAGTGG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGGAAGGAGTCAAAGATaGCTTCCAGATTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYGRSQR*LPDFCL
Trigger: CAAGCAGAAATCTGGAAGTCATCTTTGACTCCTTCC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATATGGGAACCACAAAACTaGAAGGAAGCCAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIWEPQN*KEARVA
Trigger: AGCCACTCTGGCTTCCTTTCAGTTTTGTGGTTCCCA...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTATCTTTTTCTGCCTTaGCTGCCATTGTTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAYLFLP*LPLLSQ
Trigger: TTGGCTTAACAATGGCAGTCAAGGCAGAAAAAGATA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCCTCATGAGAATATTTaGATAAATTCCGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIPHENI*INSART
Trigger: AGTCCGAGCGGAATTTATGCAAATATTCTCATGAGG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTGCTGGTTACAAATCTaGTGCCGACCCTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSCWLQI*CRPSPL
Trigger: TAAGGGAGAGGGTCGGCAGCAGATTTGTAACCAGCA...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCCTTGAACACGGTGGCTaGTGGTTACAAATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSLEHGG*WLQICC
Trigger: GCAGCAGATTTGTAACCAGCAGCCACCGTGTTCAAG...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCTTCTGCATGTGCTTaGTGTTGCAGATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSSSACA*CCRCPG
Trigger: TCCAGGACATCTGCAACAGCAAGCACATGCAGAAGA...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTGGATTCTTCTGCATGTaGTTGCTGTTGCAGATGTCC +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSGFFCM*LLLQMS
Trigger: GGACATCTGCAACAGCAAGCACATGCAGAAGAATCC...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCCTTCTTCCTTCATCTaGGATTTCTTCCATGTAAAT +
Preference number: 4 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSPSSFI*DFFHVN
Trigger: ATTTACATGGAAGAAATCGCAGATGAAGGAAGAAGG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTACTGCAGCCATGTCTaGAATAGCACTTCAATTTTA +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWYCSHV*NSTSIL
Trigger: TAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTAACTCCAGTTGGTTaGTTCTCTCTGAGCCTTACT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSILTPVG*FSLSLT
Trigger: AGTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGGTTCTTGGCTCACTTaGCAAGACTACAATAGCACT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIGSWLT*QDYNST
Trigger: AGTGCTATTGTAGTCTTGGCAAGTGAGCCAAGAACC...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTTCCCTCGGGTGAAGTaGTCACAGATGTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSFPRVK*SQMWSL
Trigger: AAGACTCCACATCTGTGACCACTTCACCCGAGGGAA...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAACAAGTGCTACTCTTaGGTCAGCATCATCTGCGAT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAINKCYS*VSIICD
Trigger: ATCGCAGATGATGCTGACCCAAGAGTAGCACTTGTT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCAACCCTTACACAGATaGTCAAGACAAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEQPLHR*SRQISS
Trigger: AGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCAACCCTTACACAGATaGTCAAGACAAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAQPLHR*SRQISS
Trigger: AGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTGTCTAATGGGCTGTTaGAAAGAGTTGGACAAACTG +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPCLMGC*KELDKL
Trigger: CAGTTTGTCCAACTCTTTCCAACAGCCCATTAGACA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTCTCACTGTGGTCAGTaGGTTATTGGTGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSHCGQ*VIGGFI
Trigger: TATGAAACCACCAATAACCCACTGACCACAGTGAGA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTTTGAAGTTCTCTTCTaGGAGAACCTCATGAGAATA +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEFEVLF*ENLMRI
Trigger: TATTCTCATGAGGTTCTCTCAGAAGAGAACTTCAAA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAGTCCAGAGAGTTCGTaGTTTTTCAGGACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAISPESS*FFRTLK
Trigger: CTTCAAAGTCCTGAAAAATCACGAACTCTCTGGACT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAAATTCTTGGCTGCCCTaGAAGAACCGATCTCTACTC +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCINSWLP*KNRSLL
Trigger: GAGTAGAGATCGGTTCTTTCAGGGCAGCCAAGAATT...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACAAGACAAATTTCCTCTaGGTCATGATCATCCACCCT +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYKTNFL*VMIIHP
Trigger: AGGGTGGATGATCATGACTCAGAGGAAATTTGTCTT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCGAAGCTATGTTTGTCTaGATCATCCCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASEAMFV*IIPWKL
Trigger: GAGTTTCCAAGGGATGATTCAGACAAACATAGCTTC...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGAAGCTATGTTTGTCTaGATCATCCCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYEAMFV*IIPWKL
Trigger: GAGTTTCCAAGGGATGATTCAGACAAACATAGCTTC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGGAAGCTATGTTTGTCTaGATCATCCCTTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENREAMFV*IIPWKL
Trigger: GAGTTTCCAAGGGATGATTCAGACAAACATAGCTTC...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTATTCTGGATGTAGGTaGTGGATCTCTGACAACTTA +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARYSGCR*WISDNL
Trigger: TAAGTTGTCAGAGATCCATCACCTACATCCAGAATA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTAATGCTCACTTACTCTaGCATATTCTGGATGTAGGT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSINAHLL*HILDVG
Trigger: ACCTACATCCAGAATATGTCAGAGTAAGTGAGCATT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTAATGCTCACTTACTCTaGCATATTCTGGATGTAGGT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARNAHLL*HILDVG
Trigger: ACCTACATCCAGAATATGTCAGAGTAAGTGAGCATT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAAATTTGGGGACCACTaGTCTAAGACATTAGATAAC +
Preference number: 4 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAKFGDH*SKTLDN
Trigger: GTTATCTAATGTCTTAGATCAGTGGTCCCCAAATTT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGAAATTTGGGGACCACTaGTCTAAGACATTAGATAAC +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEKFGDH*SKTLDN
Trigger: GTTATCTAATGTCTTAGATCAGTGGTCCCCAAATTT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTCAGTTATGCTTGTGTaGAGCTGGTTATTGCAATTC +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSISVMLV*SWLLQF
Trigger: GAATTGCAATAACCAGCTTCACACAAGCATAACTGA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTCAGTTATGCTTGTGTaGAGCTGGTTATTGCAATTC +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSVMLV*SWLLQF
Trigger: GAATTGCAATAACCAGCTTCACACAAGCATAACTGA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTACATTTTCCCACATATaGTCTGATCTCCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARTFSHI*SDLLPS
Trigger: AGAAGGTAGGAGATCAGATCATATGTGGGAAAATGT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGTTTTATCCACTACTTaGCTAGAGCCATTTGGTATA +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEVLSTT*LEPFGI
Trigger: TATACCAAATGGCTCTAGTCAAGTAGTGGATAAAAC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR GCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTTGAGTTTGCAGAGATaGAGGTTATCGCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSLSLQR*RLSQGL
Trigger: GAGACCCTGCGATAACCTGCATCTCTGCAAACTCAA...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGAGAATCGTTAACAAGTaGTACTCTTGGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENRRIVNK*YSWVSI
Trigger: GATGCTGACCCAAGAGTAGCACTTGTTAACGATTCT...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCCTTCTTCCTTCATCTaGGATTTCTTCCATGTAAAT +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIPSSFI*DFFHVN
Trigger: ATTTACATGGAAGAAATCGCAGATGAAGGAAGAAGG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTACTGCAGCCATGTCTaGAATAGCACTTCAATTTTA +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIYCSHV*NSTSIL
Trigger: TAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGACTAGACTTAGAAACTaGTTAGATGTTTATCAGGAG +
Preference number: 4 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWTRLRN*LDVYQE
Trigger: CTCCTGATAAACATCTAAGCAGTTTCTAAGTCTAGT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR GCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTCTGTCAGCAAACAGCTaGTTCAGAACACTTACTCTG +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSLSANS*FRTLTL
Trigger: CAGAGTAAGTGTTCTGAAGCAGCTGTTTGCTGACAG...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATATTTCCAACCAGAACTTaGGCTACAAACATAACGACG +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIFPTRT*ATNITT
Trigger: CGTCGTTATGTTTGTAGCCCAAGTTCTGGTTGGAAA...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAGAAGGAAGGAAATATTaGTCCAAGCACGTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIEGRKY*SKHVKG
Trigger: GCCCTTGACGTGCTTGGACCAATATTTCCTTCCTTC...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTCAGTGGGTTATTGGTaGTTTCATAATAACTGGGGA +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSVGYW*FHNNWG
Trigger: TCCCCAGTTATTATGAAACCACCAATAACCCACTGA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTTTGAAGTTCTCTTCTaGGAGAACCTCATGAGAATA +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPFEVLF*ENLMRI
Trigger: TATTCTCATGAGGTTCTCTCAGAAGAGAACTTCAAA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCATTTCCTCTGAGTCATaGTCATCCACCCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LSERKFIFRSSILSVTPCISSES*SSTLED
Trigger: ATCTTCTAGGGTGGATGATCATGACTCAGAGGAAAT...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCAAATCCATTTGGTGGTaGAGACAGAATTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSKSIWW*RQNWLA
Trigger: AGCCAGCCAATTCTGTCTTCACCACCAAATGGATTT...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTCTGATGACATCCTTTTaGGTTTTGGAAGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPLMTSF*VLEAMF
Trigger: AAACATAGCTTCCAAAACTCAAAAGGATGTCATCAG...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCTGATGACATCCTTTTaGGTTTTGGAAGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARLMTSF*VLEAMF
Trigger: AAACATAGCTTCCAAAACTCAAAAGGATGTCATCAG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACAATGCTCACTTACTCTaGCATATTCTGGATGTAGGT +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYNAHLL*HILDVG
Trigger: ACCTACATCCAGAATATGTCAGAGTAAGTGAGCATT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTTTACCAGTTACATCTaGGACAAGGTAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARFTSYI*DKVNFP
Trigger: TGGAAAGTTTACCTTGTCTCAGATGTAACTGGTAAA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTTTACCAGTTACATCTaGGACAAGGTAAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPFTSYI*DKVNFP
Trigger: TGGAAAGTTTACCTTGTCTCAGATGTAACTGGTAAA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTATTGTTCTTTGTTCTaGTTCTGTGCTCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYYCSLF*FCAHQE
Trigger: TTCCTGGTGAGCACAGAATCAGAACAAAGAACAATA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAACAGGAAACTTTGGTaGCTGGTAAGGAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAINRKLW*LVRNVE
Trigger: TTCAACATTCCTTACCAGTCACCAAAGTTTCCTGTT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACAACAGGAAACTTTGGTaGCTGGTAAGGAATGTTGAA +
Preference number: 4 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYNRKLW*LVRNVE
Trigger: TTCAACATTCCTTACCAGTCACCAAAGTTTCCTGTT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGTCAAGTTCAGAAAATaGACACTCCAAAACGAAAGT +
Preference number: 4 (lower is better)
Translates to: SEGKTWFIRRKEILVQARVKFRK*TLQNES
Trigger: ACTTTCGTTTTGGAGTGTTCATTTTCTGAACTTGAC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTATTCTAATGCCCACTaGTATCCCTGCTTTTACATT +
Preference number: 4 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPYSNAH*YPCFYI
Trigger: AATGTAAAAGCAGGGATATCAGTGGGCATTAGAATA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR TCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCCATTTGGTATATCATaGACAAATGTACTAGCCCAA +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIPFGIS*TNVLAQ
Trigger: TTGGGCTAGTACATTTGTTCATGATATACCAAATGG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR GCA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATACCTCATGAGAATATTTaGATAAATTCCGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIPHENI*INSART
Trigger: AGTCCGAGCGGAATTTATGCAAATATTCTCATGAGG...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTACTGCAGCCATGTCTaGAATAGCACTTCAATTTTA +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIYCSHV*NSTSIL
Trigger: TAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTTTGTTCTGATTCTGTaGTCACCAGGAAACAAATTT +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEFVLIL*SPGNKF
Trigger: AAATTTGTTTCCTGGTGAGCACAGAATCAGAACAAA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGCAACCCTTACACAGATaGTCAAGACAAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NANGNCRVMQTGTFQENRQPLHR*SRQISS
Trigger: AGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTG...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCCAACCCTTACACAGATaGTCAAGACAAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASQPLHR*SRQISS
Trigger: AGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTG...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCATCCTTTTGAGTTTTaGAAGCTATGTTTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEHPFEF*KLCLSE
Trigger: TTCAGACAAACATAGCTTCCAAAACTCAAAAGGATG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAGGAACAGAATGGTTATaGCATCCTTCTGACGCTGTA +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIGTEWL*HPSDAV
Trigger: TACAGCGTCAGAAGGATGCCATAACCATTCTGTTCC...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAAAATTGTGTGTAGGTaGAGCATATTACCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIKIVCR*SILPLN
Trigger: ATTCAGAGGTAATATGCTCCACCTACACACAATTTT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242351.10
3UTR CAA 72 bp CAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTaGTGTGAAGCTGGTTATTGCAATTCATTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QDYNSTRVYQLC*CEAGYCNSLFS
Trigger: TGAGAACAATGAATTGCAATAACCAGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTTTGAAGTTCTCTTCTaGGAGAACCTCATGAGAATA +
Preference number: 4 (lower is better)
Translates to: KSLQSILSLTKTLALTASFEVLF*ENLMRI
Trigger: TATTCTCATGAGGTTCTCTCAGAAGAGAACTTCAAA...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR TCA 90 bp TTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTATTTCCTCTGAGTCATaGTCATCCACCCTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LKSLQSILSLTKTLALTAISSES*SSTLED
Trigger: ATCTTCTAGGGTGGATGATCATGACTCAGAGGAAAT...AGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTAAGACAAATTTCCTCTaGGTCATGATCATCCACCCT +
Preference number: 4 (lower is better)
Translates to: FQKENSFSDLVSFQSHHAKTNFL*VMIIHP
Trigger: AGGGTGGATGATCATGACTCAGAGGAAATTTGTCTT...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR TCA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCAAGACAAATTTCCTCTaGGTCATGATCATCCACCCT +
Preference number: 4 (lower is better)
Translates to: FKIPSINIISHQNPCSNSKTNFL*VMIIHP
Trigger: AGGGTGGATGATCATGACTCAGAGGAAATTTGTCTT...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTTGTTCTGATTCTGTaGTCACCAGGAAACAAATTT +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIFVLIL*SPGNKF
Trigger: AAATTTGTTTCCTGGTGAGCACAGAATCAGAACAAA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR GCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCAAATGCAAATGGAAACTaGAGAGTAATGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSNANGN*RVMQTG
Trigger: TCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCATCCTTTTGAGTTTTaGAAGCTATGTTTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIHPFEF*KLCLSE
Trigger: TTCAGACAAACATAGCTTCCAAAACTCAAAAGGATG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR TCA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTCTGATGACATCCTTTTaGGTTTTGGAAGCTATGTTT +
Preference number: 4 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSLMTSF*VLEAMF
Trigger: AAACATAGCTTCCAAAACTCAAAAGGATGTCATCAG...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR GCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATATGTGAGAGCCAAGTATaGAGAACATCTTGCAATACA +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCICESQV*RTSCNT
Trigger: TGTATTGCAAGATGTTCTGCATACTTGGCTCTCACA...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACAACCCTTACACAGATaGTCAAGACAAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIQPLHR*SRQISS
Trigger: AGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCACATCCTTTTGAGTTTTaGAAGCTATGTTTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: ESYNESPTATFPLKSLQSHPFEF*KLCLSE
Trigger: TTCAGACAAACATAGCTTCCAAAACTCAAAAGGATG...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACATCTTGCAATACATTaGACAGTTCCTCACAATAAG +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIHLAIH*TVPHNK
Trigger: CTTATTGTGAGGAACTGTCCAATGTATTGCAAGATG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACATCCTTTTGAGTTTTaGAAGCTATGTTTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIHPFEF*KLCLSE
Trigger: TTCAGACAAACATAGCTTCCAAAACTCAAAAGGATG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CCA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTCATCCTTTTGAGTTTTaGAAGCTATGTTTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FQKENSFSDLVSFQSHHAHPFEF*KLCLSE
Trigger: TTCAGACAAACATAGCTTCCAAAACTCAAAAGGATG...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CCA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACCTCTGAATTGGATTTaGAGGATAATAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIPLNWI*RIIKKM
Trigger: CATCTTCTTTATTATCCTCCAAATCCAATTCAGAGG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS TCA 90 bp TGCGACGGCAGACCCGGGCTCGAGTGGTGGCCACCACCGATCGGGTaGTCCCGGCCTCGCCGCCGGTCTCCAACACCACAAAGCGGTCGG +
Preference number: 5 (lower is better)
Translates to: CDGRPGLEWWPPPIG*SRPRRRSPTPQSGR
Trigger: CCGACCGCTTTGTGGTGTTGGAGACCGGCGGCGAGGCCGGGATCACCCGATCGGTGGTGGCCACCACTCGAGCCCGGGTCTGCCGTCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS GCA 90 bp AATCGAAACTTACAAGTGTCCAGGGGCGGGCGCGGGCGGTGCTACTaGTGGGCGCGCCCGGAGTCAGCGAGGGCGCGCTCTCCGTCGCCG +
Preference number: 5 (lower is better)
Translates to: NRNLQVSRGGRGRCY*WARPESARARSPSP
Trigger: CGGCGACGGAGAGCGCGCCCTCGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCGCCCGCCCCTGGACACTTGTAAGTTTCGATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS CCA 90 bp CGAAACTTACAAGTGTCCAGGGGCGGGCGCGGGCGGTGCTACTGCTaGGCGCGCCCGGAGTCAGCGAGGGCGCGCTCTCCGTCGCCGTTA +
Preference number: 5 (lower is better)
Translates to: RNLQVSRGGRGRCYC*ARPESARARSPSPL
Trigger: TAACGGCGACGGAGAGCGCGCCCTCGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCGCCCGCCCCTGGACACTTGTAAGTTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 90 bp GTGATGAAGCAGCACACCTCCGGGTCCGCCATGGCGCGCTGGCTGTaGTGGCTCTGCCGCGGCGCGGGACTCGGTTCCGCGGAAATCGGA +
Preference number: 5 (lower is better)
Translates to: VMKQHTSGSAMARWL*WLCRGAGLGSAEIG
Trigger: TCCGATTTCCGCGGAACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGGTGTGCTGCTTCATCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 90 bp ATCGGAAATCGAAACTTACAAGTGTCCAGGGGCGGGCGCGGGCGGTaGTACTGCTGGGCGCGCCCGGAGTCAGCGAGGGCGCGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: IGNRNLQVSRGGRGR*YCWARPESARARSP
Trigger: CGGAGAGCGCGCCCTCGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCGCCCGCCCCTGGACACTTGTAAGTTTCGATTTCCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 90 bp CAGCACACCTCCGGGTCCGCCATGGCGCGCTGGCTGTGCTGGCTCTaGCGCGGCGCGGGACTCGGTTCCGCGGAAATCGGAAATCGAAAC +
Preference number: 5 (lower is better)
Translates to: QHTSGSAMARWLCWL*RGAGLGSAEIGNRN
Trigger: GTTTCGATTTCCGATTTCCGCGGAACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGGTGTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 90 bp TCGCCGCCGGTCTCCAACACCACAAAGCGGTCGGGCCCGGCCACCTaGAGCACCTCACAGAGCTGCGGCTCAGACAGCGCGATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SPPVSNTTKRSGPAT*STSQSCGSDSAISW
Trigger: CCAGGAGATCGCGCTGTCTGAGCCGCAGCTCTGTGAGGTGCTGCAGGTGGCCGGGCCCGACCGCTTTGTGGTGTTGGAGACCGGCGGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS CCA 90 bp ATGAAGCAGCACACCTCCGGGTCCGCCATGGCGCGCTGGCTGTGCTaGCTCTGCCGCGGCGCGGGACTCGGTTCCGCGGAAATCGGAAAT +
Preference number: 5 (lower is better)
Translates to: MKQHTSGSAMARWLC*LCRGAGLGSAEIGN
Trigger: ATTTCCGATTTCCGCGGAACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGGTGTGCTGCTTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS CCA 90 bp ATTTTGGTGATGAAGCAGCACACCTCCGGGTCCGCCATGGCGCGCTaGCTGTGCTGGCTCTGCCGCGGCGCGGGACTCGGTTCCGCGGAA +
Preference number: 5 (lower is better)
Translates to: ILVMKQHTSGSAMAR*LCWLCRGAGLGSAE
Trigger: TTCCGCGGAACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGGTGTGCTGCTTCATCACCAAAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS CCA 90 bp AGCGCGATCTCCTGGAGCAGCGCGTCCAGGGCCATGCGGCCCCCGTaGGCGCACAGGATTTTGGTGATGAAGCAGCACACCTCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: SAISWSSASRAMRPP*AHRILVMKQHTSGS
Trigger: GGACCCGGAGGTGTGCTGCTTCATCACCAAAATCCTGTGCGCCCACGGGGGCCGCATGGCCCTGGACGCGCTGCTCCAGGAGATCGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS CCA 90 bp GGTGGAAAGAAAGAGAACGCGCGGGCAAATCTGCTGGTGACCGCCTaGGGTGGCCCCCTCTCGGTTCTAGGCTCGGCGAGGGTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: GGKKENARANLLVTA*GGPLSVLGSARVRF
Trigger: GAACCTCACCCTCGCCGAGCCTAGAACCGAGAGGGGGCCACCCCAGGCGGTCACCAGCAGATTTGCCCGCGCGTTCTCTTTCTTTCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS CCA 90 bp AAAGAAAGAGAACGCGCGGGCAAATCTGCTGGTGACCGCCTGGGGTaGCCCCCTCTCGGTTCTAGGCTCGGCGAGGGTGAGGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KERERAGKSAGDRLG*PPLGSRLGEGEVLQ
Trigger: CTGGAGAACCTCACCCTCGCCGAGCCTAGAACCGAGAGGGGGCCACCCCAGGCGGTCACCAGCAGATTTGCCCGCGCGTTCTCTTTCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS CCA 90 bp CGGGTCCTAGTGGCAGGTTTACAGCCGGCCGCAAGGGCAACTGGGTaGAAAGAAAGAGAACGCGCGGGCAAATCTGCTGGTGACCGCCTG +
Preference number: 5 (lower is better)
Translates to: RVLVAGLQPAARATG*KERERAGKSAGDRL
Trigger: CAGGCGGTCACCAGCAGATTTGCCCGCGCGTTCTCTTTCTTTCCACCCAGTTGCCCTTGCGGCCGGCTGTAAACCTGCCACTAGGACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS TCA 90 bp CCTGGATGTTCTGGACCACGTCGGGGTTCAGCCCGTGCTCCCTCATaGTGGCCAGCACCTTTCTGTCCATCAGGTTATGGGACCGGAGGC +
Preference number: 5 (lower is better)
Translates to: PGCSGPRRGSARAPS*WPAPFCPSGYGTGG
Trigger: GCCTCCGGTCCCATAACCTGATGGACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGACGTGGTCCAGAACATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 90 bp AGATCAGTAGCCTTGGACGAGCCTGAGGGAGGCCGAGCGCGATCCTaGCTCCCCAGATACGTGAACTTGCGGGTGAGATCGTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: RSVALDEPEGGRARS*LPRYVNLRVRSSTG
Trigger: GCCTGTGGACGATCTCACCCGCAAGTTCACGTATCTGGGGAGTCAGGATCGCGCTCGGCCTCCCTCAGGCTCGTCCAAGGCTACTGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 90 bp CCCAGCAAGTTGAGTTTGCAGAGATGCAGGTTATCGCAGGGTCTCTaGCAGTACTTGCGACGGCAGACCCGGGCTCGAGTGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: PSKLSLQRCRLSQGL*QYLRRQTRARVVAT
Trigger: GGTGGCCACCACTCGAGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGACCCTGCGATAACCTGCATCTCTGCAAACTCAACTTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS TCA 90 bp AGATCGTCCACAGGCGCGTCCTCCAGGGAAGCCCTGTGGCTGATCTaGTCTGGACTAGGTGTGCAGGACCTCTCAGCAGACGCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: RSSTGASSREALWLI*SGLGVQDLSADAEA
Trigger: TGCTTCAGCGTCTGCTGAGAGGTCCTGCACACCTAGTCCAGATCAGATCAGCCACAGGGCTTCCCTGGAGGACGCGCCTGTGGACGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 90 bp GGCCCTGGGGGATTCTTCTGCATGTGCTTGCTGTTGCAGATGTCCTaGATGTTCTGGACCACGTCGGGGTTCAGCCCGTGCTCCCTCATG +
Preference number: 5 (lower is better)
Translates to: GPGGFFCMCLLLQMS*MFWTTSGFSPCSLM
Trigger: CATGAGGGAGCACGGGCTGAACCCCGACGTGGTCCAGAACATCCAGGACATCTGCAACAGCAAGCACATGCAGAAGAATCCCCCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 90 bp GAAAGCAAGCCTGTGCCCTTTCTGGTGGTCACAGCTTCAGGTGTTTaGAGAGAGCCAAGAGAAGAGCGGGCGGCAGGTAGCGTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: ESKPVPFLVVTASGV*REPREERAAGSVGE
Trigger: TTCTCCCACGCTACCTGCCGCCCGCTCTTCTCTTGGCTCTCTGCAAACACCTGAAGCTGTGACCACCAGAAAGGGCACAGGCTTGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 90 bp CCGTGCTCCCTCATGATGGCCAGCACCTTTCTGTCCATCAGGTTATaGGACCGGAGGCAGTTGGGAAAACGACAGTTCCCTCGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PCSLMMASTFLSIRL*DRRQLGKRQFPRVK
Trigger: CTTCACCCGAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCATAACCTGATGGACAGAAAGGTGCTGGCCATCATGAGGGAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 90 bp GCGGCAGGTAGCGTGGGAGAAAACACAGTCTTTCTCCTGGCGCCTTaGTCATTCGTCCAGGATGTGAGGCTCTTCCAGTTGGGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: AAGSVGENTVFLLAP*SFVQDVRLFQLGAD
Trigger: ATCAGCCCCCAACTGGAAGAGCCTCACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAGACTGTGTTTTCTCCCACGCTACCTGCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 90 bp GGTTATGGGACCGGAGGCAGTTGGGAAAACGACAGTTCCCTCGGGTaGAGTGGTCACAGATGTGGAGTCTTGAACACGGTGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: GYGTGGSWENDSSLG*SGHRCGVLNTVAAG
Trigger: ACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTGACCACTTCACCCGAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCATAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 90 bp TTGCAGATGTCCTGGATGTTCTGGACCACGTCGGGGTTCAGCCCGTaGTCCCTCATGATGGCCAGCACCTTTCTGTCCATCAGGTTATGG +
Preference number: 5 (lower is better)
Translates to: LQMSWMFWTTSGFSP*SLMMASTFLSIRLW
Trigger: CCATAACCTGATGGACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGACGTGGTCCAGAACATCCAGGACATCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAAGGTCTCTGGCAGTACTaGCGACGGCAGACCCGGGCT +
Preference number: 5 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHEGLWQY*RRQTRA
Trigger: AGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGACC...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS CCA 90 bp TGGGACCGGAGGCAGTTGGGAAAACGACAGTTCCCTCGGGTGAAGTaGTCACAGATGTGGAGTCTTGAACACGGTGGCTGCTGGTTACAA +
Preference number: 5 (lower is better)
Translates to: WDRRQLGKRQFPRVK*SQMWSLEHGGCWLQ
Trigger: TTGTAACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTGACCACTTCACCCGAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACCTAAAAACCTCTGGCTaGTCCCGGCCTGACTTGTTC +
Preference number: 5 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDLKTSG*SRPDLF
Trigger: GAACAAGTCAGGCCGGGACAAGCCAGAGGTTTTTAG...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS TCA 90 bp AAAACGACAGTTCCCTCGGGTGAAGTGGTCACAGATGTGGAGTCTTaGACACGGTGGCTGCTGGTTACAAATCTGCTGCCGACCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KTTVPSGEVVTDVES*TRWLLVTNLLPTLS
Trigger: GGAGAGGGTCGGCAGCAGATTTGTAACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTGACCACTTCACCCGAGGGAACTGTCGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 90 bp GCTGATCTGATCTGGACTAGGTGTGCAGGACCTCTCAGCAGACGCTaGAGCAGACGCAAGAAATTCTTGGCTGCCCTGAAAGAACCGATC +
Preference number: 5 (lower is better)
Translates to: ADLIWTRCAGPLSRR*SRRKKFLAALKEPI
Trigger: GATCGGTTCTTTCAGGGCAGCCAAGAATTTCTTGCGTCTGCTTCAGCGTCTGCTGAGAGGTCCTGCACACCTAGTCCAGATCAGATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGTCTCTGGCAGTACTaGCGACGGCAGACCCGGGCT +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGLWQY*RRQTRA
Trigger: AGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGACC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CAA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCTGGGACCGGAGGCAGTaGGGAAAACGACAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSWDRRQ*GKRQFP
Trigger: AGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCA...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS TCA 90 bp ATAAATTCCGCTCGGACTGCGAATAGTTGCACCGGCCCAGCAAGTTaGGTTTGCAGAGATGCAGGTTATCGCAGGGTCTCTGGCAGTACT +
Preference number: 5 (lower is better)
Translates to: INSARTANSCTGPAS*VCRDAGYRRVSGST
Trigger: AGTACTGCCAGAGACCCTGCGATAACCTGCATCTCTGCAAACTCAACTTGCTGGGCCGGTGCAACTATTCGCAGTCCGAGCGGAATTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS GCA 90 bp GGCTCTTCCAGTTGGGGGCTGATGTTGAATTGGAAGCAAGGTAAGTaGTGCCTGGATTTCCATGCAAGAGGTCCTCTTGACTGCCGTTCT +
Preference number: 5 (lower is better)
Translates to: GSSSWGLMLNWKQGK*CLDFHARGPLDCRS
Trigger: AGAACGGCAGTCAAGAGGACCTCTTGCATGGAAATCCAGGCAGCACTTACCTTGCTTCCAATTCAACATCAGCCCCCAACTGGAAGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTAGGCAGAGTGCTGACTaGTGCAGGGGCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPRQSAD*CRGSGF
Trigger: GAATCCACTGCCCCTGCACAAGTCAGCACTCTGCCT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR CAA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACAGACTGCAGCTCTGTaGCTTGAGGAAAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHEQTAAL*LEERAA
Trigger: TGCTGCCCTTTCCTCAAGCAACAGAGCTGCAGTCTG...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460845.5
CDS TCA 90 bp AAAACACAGTCTTTCTCCTGGCGCCTTGGTCATTCGTCCAGGATGTaGGGCTCTTCCAGTTGGGGGCTGATGTTGAATTGGAAGCAAGGT +
Preference number: 5 (lower is better)
Translates to: KTQSFSWRLGHSSRM*GSSSWGLMLNWKQG
Trigger: ACCTTGCTTCCAATTCAACATCAGCCCCCAACTGGAAGAGCCTCACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAGACTGTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 90 bp CTGGATGTCCTGAGTTCCACTTTTGCCATTGATGATCCTGTAGTCTaGGGAAAGCAAGCCTGTGCCCTTTCTGGTGGTCACAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LDVLSSTFAIDDPVV*GKQACALSGGHSFR
Trigger: CCTGAAGCTGTGACCACCAGAAAGGGCACAGGCTTGCTTTCCTCAGACTACAGGATCATCAATGGCAAAAGTGGAACTCAGGACATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTGGTCTCTGGCAGTACTaGCGACGGCAGACCCGGGCT +
Preference number: 5 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPGLWQY*RRQTRA
Trigger: AGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGACC...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCCAAGATCAGTAGCCTaGGACGAGCCTGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSPRSVA*DEPEGG
Trigger: GCCTCCCTCAGGCTCGTCCAAGGCTACTGATCTTGG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 90 bp CTCTCAGCAGACGCTGAAGCAGACGCAAGAAATTCTTGGCTGCCCTaGAAGAACCGATCTCTACTCTTGCTTCTAGCCCTATATGCCATG +
Preference number: 5 (lower is better)
Translates to: LSADAEADARNSWLP*KNRSLLLLLALYAM
Trigger: CATGGCATATAGGGCTAGAAGCAAGAGTAGAGATCGGTTCTTTCAGGGCAGCCAAGAATTTCTTGCGTCTGCTTCAGCGTCTGCTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 90 bp TCTTCCAGTTGGGGGCTGATGTTGAATTGGAAGCAAGGTAAGTGCTaGCTGGATTTCCATGCAAGAGGTCCTCTTGACTGCCGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: SSSWGLMLNWKQGKC*LDFHARGPLDCRSL
Trigger: TAGAGAACGGCAGTCAAGAGGACCTCTTGCATGGAAATCCAGGCAGCACTTACCTTGCTTCCAATTCAACATCAGCCCCCAACTGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 90 bp ATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCTaGTTCAGAACACTTACTCTGGCCCTCTCTTCATCTGCTGCACAT +
Preference number: 5 (lower is better)
Translates to: MSPGHEHLKHLSANS*FRTLTLALSSSAAH
Trigger: ATGTGCAGCAGATGAAGAGAGGGCCAGAGTAAGTGTTCTGAAGCAGCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTTGGGACCGGAGGCAGTaGGGAAAACGACAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSWDRRQ*GKRQFP
Trigger: AGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCA...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGTGGGACCGGAGGCAGTaGGGAAAACGACAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWWDRRQ*GKRQFP
Trigger: AGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCA...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCCAAGATCAGTAGCCTaGGACGAGCCTGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIPRSVA*DEPEGG
Trigger: GCCTCCCTCAGGCTCGTCCAAGGCTACTGATCTTGG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCCACAGCTTCAGGTGTTaGCAGAGAGCCAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSHSFRC*QRAKRR
Trigger: TCTTCTCTTGGCTCTCTGCAAACACCTGAAGCTGTG...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp AGTGACTTGATGAGCCCAGGGCATGAACATCTCAAGCATCTGTCAGCAAACAGCACAGAATTGGCTGGCTaGGTGACAGAAGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: SDLMSPGHEHLKHLSANSTELAG*VTEEGV
Trigger: CACTCCTTCTTCTGTCACCAAGCCAGCCAATTCTGT...GCTGTTTGCTGACAGATGCTTGAGATGTTCATGCCCTGGGCTCATCAAGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTGCCAAGGCGGGCAGATaGCCTGAGCTCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAAKAGR*PELRSL
Trigger: CAAACTCCTGAGCTCAGGCAATCTGCCCGCCTTGGC...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACCTGCTCCTAGGTTCTaGGCTCACTTGCCAAGACTA +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTPAPRF*AHLPRL
Trigger: TAGTCTTGGCAAGTGAGCCAAGAACCTAGGAGCAGG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTAAGGCAGAGTGCTGACTaGTGCAGGGGCAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLRQSAD*CRGSGF
Trigger: GAATCCACTGCCCCTGCACAAGTCAGCACTCTGCCT...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460845.5
CDS TCA 90 bp TATGTTTGTCTGAATCATCCCTTGGAAACTCAGCTCATAGTTCCGTaGGCCCGCCTGAAATGGCACAACTCCCCTCGGACAGGATTGATA +
Preference number: 5 (lower is better)
Translates to: YVCLNHPLETQLIVP*ARLKWHNSPRTGLI
Trigger: TATCAATCCTGTCCGAGGGGAGTTGTGCCATTTCAGGCGGGCTCACGGAACTATGAGCTGAGTTTCCAAGGGATGATTCAGACAAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242351.10
ENST00000460845.5
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACAGATGTGGAGTCTaGAACACGGTGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWHRCGV*NTVAAG
Trigger: ACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAAGACGCAAGAAATTCTaGGCTGCCCTGAAAGAACCG +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTRRKKF*AALKEP
Trigger: CGGTTCTTTCAGGGCAGCCAAGAATTTCTTGCGTCT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTCCAAGATCAGTAGCCTaGGACGAGCCTGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPPRSVA*DEPEGG
Trigger: GCCTCCCTCAGGCTCGTCCAAGGCTACTGATCTTGG...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCTTTCTCCTGGCGCCTaGGTCATTCGTCCAGGATGT +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSLSPGA*VIRPGC
Trigger: ACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTCAGGAAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAAAGATGGAAGTGGACTTaGCTGCAGCTACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: FRKTGSRFTSDLMSPGHERWKWT*LQLPLS
Trigger: GCTTAATGGTAGCTGCAGCAAAGTCCACTTCCATCT...TTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACATGAAGAGTCGACGTTaGAATTTTTCCGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDMKSRR*NFSVCL
Trigger: AAGACAAACGGAAAAATTCAAACGTCGACTCTTCAT...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp ACAAAGCATGCTGCTGGGCTGGGCATCAGGCGTGGCACAGCAAACAAGACAGACTCTGATGACATCCTTTaGAGTTTTGGAAGCTATGTT +
Preference number: 5 (lower is better)
Translates to: TKHAAGLGIRRGTANKTDSDDIL*SFGSYV
Trigger: AACATAGCTTCCAAAACTCAAAAGGATGTCATCAGA...GTCTGTCTTGTTTGCTGTGCCACGCCTGATGCCCAGCCCAGCAGCATGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGACACTGACGAGGTCTTaGCTGGCTGATGGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSETLTRS*LADGLA
Trigger: GGCCAGACCATCAGCCAGCAAAGACCTCGTCAGTGT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTGCCAAGGCGGGCAGATaGCCTGAGCTCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIAKAGR*PELRSL
Trigger: CAAACTCCTGAGCTCAGGCAATCTGCCCGCCTTGGC...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGCCAAGGCGGGCAGATaGCCTGAGCTCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARAKAGR*PELRSL
Trigger: CAAACTCCTGAGCTCAGGCAATCTGCCCGCCTTGGC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTCACCGGCCCAGCAAGTaGAGTTTGCAGAGATGCAGG +
Preference number: 5 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPHRPSK*SLQRCR
Trigger: CCTGCATCTCTGCAAACTCAACTTGCTGGGCCGGTG...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCACCGGCCCAGCAAGTaGAGTTTGCAGAGATGCAGG +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIHRPSK*SLQRCR
Trigger: CCTGCATCTCTGCAAACTCAACTTGCTGGGCCGGTG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTGGGACCGGAGGCAGTaGGGAAAACGACAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIWDRRQ*GKRQFP
Trigger: AGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCA...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCCCAGATACGTGAACTaGCGGGTGAGATCGTCCACA +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEPRYVN*RVRSST
Trigger: TGTGGACGATCTCACCCGCAAGTTCACGTATCTGGG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCCCAGATACGTGAACTaGCGGGTGAGATCGTCCACA +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIPRYVN*RVRSST
Trigger: TGTGGACGATCTCACCCGCAAGTTCACGTATCTGGG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGTGAGGCTCTTCCAGTaGGGGGCTGATGTTGAATTG +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSVRLFQ*GADVEL
Trigger: CAATTCAACATCAGCCCCCAACTGGAAGAGCCTCAC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCTTTCTCCTGGCGCCTaGGTCATTCGTCCAGGATGT +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEALSPGA*VIRPGC
Trigger: ACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAAGATGGAAGTGGACTTaGCTGCAGCTACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTRWKWT*LQLPLS
Trigger: GCTTAATGGTAGCTGCAGCAAAGTCCACTTCCATCT...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTACACTGACGAGGTCTTaGCTGGCTGATGGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSITLTRS*LADGLA
Trigger: GGCCAGACCATCAGCCAGCAAAGACCTCGTCAGTGT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCCTGCTCCTAGGTTCTaGGCTCACTTGCCAAGACTA +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSPAPRF*AHLPRL
Trigger: TAGTCTTGGCAAGTGAGCCAAGAACCTAGGAGCAGG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGGGCTGTTGGAAAGAGTaGGACAAACTGCACCCCTAC +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWGCWKE*DKLHPY
Trigger: GTAGGGGTGCAGTTTGTCCAACTCTTTCCAACAGCC...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACTTCCAGATTTCTGCTaGAGCCAATGGGTAGATGGT +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTLPDFC*SQWVDG
Trigger: ACCATCTACCCATTGGCTCAAGCAGAAATCTGGAAG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCAGACTGCAGCTCTGTaGCTTGAGGAAAGGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIQTAAL*LEERAA
Trigger: TGCTGCCCTTTCCTCAAGCAACAGAGCTGCAGTCTG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS CCA 90 bp AAAAACGGAGGGATTCGATCTGGTATCCACACAGCTGTCGAACTGTaGAGGAGGGCTCGTGTACGTTATATTTCCTTCAGTAAACTTTCC +
Preference number: 5 (lower is better)
Translates to: KNGGIRSGIHTAVEL*RRARVRYISFSKLS
Trigger: GGAAAGTTTACTGAAGGAAATATAACGTACACGAGCCCTCCTCCACAGTTCGACAGCTGTGTGGATACCAGATCGAATCCCTCCGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCCCAGCAAGTTGAGTTaGCAGAGATGCAGGTTATCG +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWPSKLS*QRCRLS
Trigger: CGATAACCTGCATCTCTGCAAACTCAACTTGCTGGG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CAA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTACTGCTAATTCCTCTTaGTTCAGTCCAGAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPTANSS*FSPESS
Trigger: CGAACTCTCTGGACTGAACAAAGAGGAATTAGCAGT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGAGACGCAAGAAATTCTaGGCTGCCCTGAAAGAACCG +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWRRKKF*AALKEP
Trigger: CGGTTCTTTCAGGGCAGCCAAGAATTTCTTGCGTCT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTGAGGCTCTTCCAGTaGGGGGCTGATGTTGAATTG +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIVRLFQ*GADVEL
Trigger: CAATTCAACATCAGCCCCCAACTGGAAGAGCCTCAC...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCCTTTCTCCTGGCGCCTaGGTCATTCGTCCAGGATGT +
Preference number: 5 (lower is better)
Translates to: LQSILSLTKTLALTASSSLSPGA*VIRPGC
Trigger: ACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAG...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCTTTCTCCTGGCGCCTaGGTCATTCGTCCAGGATGT +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARLSPGA*VIRPGC
Trigger: ACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTCACAGCTTCAGGTGTTaGCAGAGAGCCAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSHSFRC*QRAKRR
Trigger: TCTTCTCTTGGCTCTCTGCAAACACCTGAAGCTGTG...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGACAGAATTGGCTGGCTaGGTGACAGAAGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWTELAG*VTEEGV
Trigger: CACTCCTTCTTCTGTCACCAAGCCAGCCAATTCTGT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTCCCCTCGGACAGGATaGATAGAGAGACTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEASPRTG*IERLQV
Trigger: TACCTGGAGTCTCTCTATCAATCCTGTCCGAGGGGA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTCCCCTCGGACAGGATaGATAGAGAGACTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSESPRTG*IERLQV
Trigger: TACCTGGAGTCTCTCTATCAATCCTGTCCGAGGGGA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAACACTGACGAGGTCTTaGCTGGCTGATGGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAITLTRS*LADGLA
Trigger: GGCCAGACCATCAGCCAGCAAAGACCTCGTCAGTGT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTCTTTCCAACCAGAACTaGGGCTACAAACATAACGAC +
Preference number: 5 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPLSNQN*GYKHND
Trigger: GTCGTTATGTTTGTAGCCCAAGTTCTGGTTGGAAAG...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 90 bp AGAGGCGTCGGATGGGAAAGGAATCACAACTCATTACCCGAAAATTaGTTGTATAACTTCCTACAGAACAGAGGTGGATTCCGGGGTTAC +
Preference number: 5 (lower is better)
Translates to: RGVGWERNHNSLPEN*LYNFLQNRGGFRGY
Trigger: GTAACCCCGGAATCCACCTCTGTTCTGTAGGAAGTTATACAATCAATTTTCGGGTAATGAGTTGTGATTCCTTTCCCATCCGACGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242351.10
ENST00000460845.5
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCCCAGCAAGTTGAGTTaGCAGAGATGCAGGTTATCG +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAPSKLS*QRCRLS
Trigger: CGATAACCTGCATCTCTGCAAACTCAACTTGCTGGG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000464606.5
CDS-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCACAGATGTGGAGTCTaGAACACGGTGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYHRCGV*NTVAAG
Trigger: ACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCCACAGATGTGGAGTCTaGAACACGGTGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: KSLQSILSLTKTLALTASHRCGV*NTVAAG
Trigger: ACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTG...GCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTTCTTCTGCATGTGCTaGCTGTTGCAGATGTCCTGG +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIFFCMC*LLQMSW
Trigger: CCAGGACATCTGCAACAGCAAGCACATGCAGAAGAA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGAACCGATCTCTACTCTaGCTTCTAGCCCTATATGCC +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWNRSLL*LLALYA
Trigger: GGCATATAGGGCTAGAAGCAAGAGTAGAGATCGGTT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATACCCAGATACGTGAACTaGCGGGTGAGATCGTCCACA +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIPRYVN*RVRSST
Trigger: TGTGGACGATCTCACCCGCAAGTTCACGTATCTGGG...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTCCAAGATCAGTAGCCTaGGACGAGCCTGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: LKSLQSILSLTKTLALTAPRSVA*DEPEGG
Trigger: GCCTCCCTCAGGCTCGTCCAAGGCTACTGATCTTGG...AGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCTAAAAACCTCTGGCTaGTCCCGGCCTGACTTGTTC +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSILKTSG*SRPDLF
Trigger: GAACAAGTCAGGCCGGGACAAGCCAGAGGTTTTTAG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTAAGTTGGGGGCTGATGTaGAATTGGAAGCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLSWGLM*NWKQGK
Trigger: CTTACCTTGCTTCCAATTCAACATCAGCCCCCAACT...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCACAGCTTCAGGTGTTaGCAGAGAGCCAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEHSFRC*QRAKRR
Trigger: TCTTCTCTTGGCTCTCTGCAAACACCTGAAGCTGTG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGAGATGGAAGTGGACTTaGCTGCAGCTACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWRWKWT*LQLPLS
Trigger: GCTTAATGGTAGCTGCAGCAAAGTCCACTTCCATCT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTACAGAATTGGCTGGCTaGGTGACAGAAGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDITELAG*VTEEGV
Trigger: CACTCCTTCTTCTGTCACCAAGCCAGCCAATTCTGT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTAGCTCATCCTCCCCTCGGACAGGATaGATAGAGAGACTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: LQSILSLTKTLALTASSSSPRTG*IERLQV
Trigger: TACCTGGAGTCTCTCTATCAATCCTGTCCGAGGGGA...GGATGAGCTAGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCCTGCTCCTAGGTTCTaGGCTCACTTGCCAAGACTA +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARPAPRF*AHLPRL
Trigger: TAGTCTTGGCAAGTGAGCCAAGAACCTAGGAGCAGG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGGCCTCTTTGGGATATaGTTCTTTGTTCTGATTCTG +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTGLFGI*FFVLIL
Trigger: CAGAATCAGAACAAAGAACAATATCCCAAAGAGGCC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCCACCGGCCCAGCAAGTaGAGTTTGCAGAGATGCAGG +
Preference number: 5 (lower is better)
Translates to: FKIPSINIISHQNPCSNSHRPSK*SLQRCR
Trigger: CCTGCATCTCTGCAAACTCAACTTGCTGGGCCGGTG...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp GATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTCACAGCTGGAGAAGCTAACTGCTAATTCCTCTTaGTTCAGTCCAGAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: DYSLGVLHQSSSSQLEKLTANSS*FSPESS
Trigger: CGAACTCTCTGGACTGAACAAAGAGGAATTAGCAGT...TAGCTTCTCCAGCTGTGAAGAGCTGGATTGATGCAGTACACCTAAGGAATAATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTTCTTCTGCATGTGCTaGCTGTTGCAGATGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARFFCMC*LLQMSW
Trigger: CCAGGACATCTGCAACAGCAAGCACATGCAGAAGAA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCTAAAAACCTCTGGCTaGTCCCGGCCTGACTTGTTC +
Preference number: 5 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYLKTSG*SRPDLF
Trigger: GAACAAGTCAGGCCGGGACAAGCCAGAGGTTTTTAG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAGTTGGGGGCTGATGTaGAATTGGAAGCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDISWGLM*NWKQGK
Trigger: CTTACCTTGCTTCCAATTCAACATCAGCCCCCAACT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACGTGAGGCTCTTCCAGTaGGGGGCTGATGTTGAATTG +
Preference number: 5 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYVRLFQ*GADVEL
Trigger: CAATTCAACATCAGCCCCCAACTGGAAGAGCCTCAC...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGAGATGGAAGTGGACTTaGCTGCAGCTACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSERWKWT*LQLPLS
Trigger: GCTTAATGGTAGCTGCAGCAAAGTCCACTTCCATCT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGTCCCCTCGGACAGGATaGATAGAGAGACTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: NANGNCRVMQTGTFQENRSPRTG*IERLQV
Trigger: TACCTGGAGTCTCTCTATCAATCCTGTCCGAGGGGA...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACTCCCCTCGGACAGGATaGATAGAGAGACTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYSPRTG*IERLQV
Trigger: TACCTGGAGTCTCTCTATCAATCCTGTCCGAGGGGA...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAAACAGGCTCCAGATTCACGAGTGACTTGATGAGCCCAGGGCATGAACATCTCTCTGATGACATCCTTTaGAGTTTTGGAAGCTATGTT +
Preference number: 5 (lower is better)
Translates to: KTGSRFTSDLMSPGHEHLSDDIL*SFGSYV
Trigger: AACATAGCTTCCAAAACTCAAAAGGATGTCATCAGA...GAGATGTTCATGCCCTGGGCTCATCAAGTCACTCGTGAATCTGGAGCCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTCCACATAGGCACGGCTaGTCGCATAAAATAGGAGTT +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIPHRHG*SHKIGV
Trigger: AACTCCTATTTTATGCGACAAGCCGTGCCTATGTGG...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTAAACTTTCCAACACATaGGAATCATCAGAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPKLSNT*ESSEGL
Trigger: AAGCCCTTCTGATGATTCCAATGTGTTGGAAAGTTT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGACAGGAGAGAAAGGTaGCTGCAATTACAGAAAATT +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTDRRER*LQLQKI
Trigger: AATTTTCTGTAATTGCAGCAACCTTTCTCTCCTGTC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACAGTTTATCAGTTATGCTaGTGTGAAGCTGGTTATTGC +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTVYQLC*CEAGYC
Trigger: GCAATAACCAGCTTCACACAAGCATAACTGATAAAC...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTGTTTATCAGTTATGCTaGTGTGAAGCTGGTTATTGC +
Preference number: 5 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPVYQLC*CEAGYC
Trigger: GCAATAACCAGCTTCACACAAGCATAACTGATAAAC...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGAGACACAGGGCCTCTTaGGGATATTGTTCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWRHRAS*GYCSLF
Trigger: GAACAAAGAACAATATCCCAAAGAGGCCCTGTGTCT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAGAAGGAAGGAAATATaGGTCCAAGCACGTCAAGGG +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIRRKEI*VQARQG
Trigger: CCCTTGACGTGCTTGGACCAATATTTCCTTCCTTCT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTAGAAGGAAGGAAATATaGGTCCAAGCACGTCAAGGG +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEARRKEI*VQARQG
Trigger: CCCTTGACGTGCTTGGACCAATATTTCCTTCCTTCT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 90 bp ATTAAGCGGACAACCCTTACACAGATGGTCAAGACAAATTTCCTCTaGGTCATGATCATCCACCCTAGAAGATGTGGTACTTGTGACATC +
Preference number: 5 (lower is better)
Translates to: IKRTTLTQMVKTNFL*VMIIHPRRCGTCDI
Trigger: GATGTCACAAGTACCACATCTTCTAGGGTGGATGATCATGACTCAGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTGTCCGCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242351.10
ENST00000460845.5
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 90 bp TCTGACAACTTATATTTCTTTGAGGATAGGAAGCAAAAGTCCTCCTaGGGACGAAAGGTCGCAGTTAAAGACACTGACGAGGTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: SDNLYFFEDRKQKSS*GRKVAVKDTDEVFA
Trigger: AGCAAAGACCTCGTCAGTGTCTTTAACTGCGACCTTTCGTCCTCAGGAGGACTTTTGCTTCCTATCCTCAAAGAAATATAAGTTGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTACTGCTAATTCCTCTTaGTTCAGTCCAGAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEATANSS*FSPESS
Trigger: CGAACTCTCTGGACTGAACAAAGAGGAATTAGCAGT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTAACCGATCTCTACTCTaGCTTCTAGCCCTATATGCC +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARNRSLL*LLALYA
Trigger: GGCATATAGGGCTAGAAGCAAGAGTAGAGATCGGTT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAGACGCAAGAAATTCTaGGCTGCCCTGAAAGAACCG +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIRRKKF*AALKEP
Trigger: CGGTTCTTTCAGGGCAGCCAAGAATTTCTTGCGTCT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTCCCAGATACGTGAACTaGCGGGTGAGATCGTCCACA +
Preference number: 5 (lower is better)
Translates to: FQKENSFSDLVSFQSHHAPRYVN*RVRSST
Trigger: TGTGGACGATCTCACCCGCAAGTTCACGTATCTGGG...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp CTTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCCTAAAAACCTCTGGCTaGTCCCGGCCTGACTTGTTC +
Preference number: 5 (lower is better)
Translates to: LSERKFIFRSSILSVTPCLKTSG*SRPDLF
Trigger: GAACAAGTCAGGCCGGGACAAGCCAGAGGTTTTTAG...GCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTAGTTGGGGGCTGATGTaGAATTGGAAGCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSISWGLM*NWKQGK
Trigger: CTTACCTTGCTTCCAATTCAACATCAGCCCCCAACT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTGTGAGGCTCTTCCAGTaGGGGGCTGATGTTGAATTG +
Preference number: 5 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSVRLFQ*GADVEL
Trigger: CAATTCAACATCAGCCCCCAACTGGAAGAGCCTCAC...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAACAGAATTGGCTGGCTaGGTGACAGAAGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAITELAG*VTEEGV
Trigger: CACTCCTTCTTCTGTCACCAAGCCAGCCAATTCTGT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCTCTGAGCCTTACTTGCCAGCTCTTATTACCGCATTCCAGAGAGAGTCAACCTATGAAGAGTCGACGTTaGAATTTTTCCGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SLSLTCQLLLPHSRESQPMKSRR*NFSVCL
Trigger: AAGACAAACGGAAAAATTCAAACGTCGACTCTTCAT...AGGTTGACTCTCTCTGGAATGCGGTAATAAGAGCTGGCAAGTAAGGCTCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACATCTGATGACATCCTTTaGAGTTTTGGAAGCTATGTT +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTSDDIL*SFGSYV
Trigger: AACATAGCTTCCAAAACTCAAAAGGATGTCATCAGA...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTCCACATAGGCACGGCTaGTCGCATAAAATAGGAGTT +
Preference number: 5 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPPHRHG*SHKIGV
Trigger: AACTCCTATTTTATGCGACAAGCCGTGCCTATGTGG...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCCACATAGGCACGGCTaGTCGCATAAAATAGGAGTT +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIPHRHG*SHKIGV
Trigger: AACTCCTATTTTATGCGACAAGCCGTGCCTATGTGG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCTTTCCAACCAGAACTaGGGCTACAAACATAACGAC +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSELSNQN*GYKHND
Trigger: GTCGTTATGTTTGTAGCCCAAGTTCTGGTTGGAAAG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCCTGGGCATCAGAATTaGTTTAAAACCTCCCAGATG +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEPGHQN*FKTSQM
Trigger: CATCTGGGAGGTTTTAAACAAATTCTGATGCCCAGG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGATTAACTCCAGTTGGTaGCTTCTCTCTGAGCCTTAC +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEINSSW*LLSEPY
Trigger: GTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAAT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGGCCTCTTTGGGATATaGTTCTTTGTTCTGATTCTG +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSGLFGI*FFVLIL
Trigger: CAGAATCAGAACAAAGAACAATATCCCAAAGAGGCC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCACTACAATTCCACACATAATCCATTACATTaGGAAAAAGAAGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: GPSTSRALSKNRWHYNSTHNPLH*EKEAPG
Trigger: ACCAGGAGCTTCTTTTTCCAAATGTAATGGATTATG...TGTGGAATTGTAGTGCCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTAGAAGGAAGGAAATATaGGTCCAAGCACGTCAAGGG +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARRRKEI*VQARQG
Trigger: CCCTTGACGTGCTTGGACCAATATTTCCTTCCTTCT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGGCCATGACAGCGGTTTaGAACTTTATCCTGAAGACT +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSEAMTAV*NFILKT
Trigger: AGTCTTCAGGATAAAGTTCAAAACCGCTGTCATGGC...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTTTAAAAATAAGGGGTTaGGGAGGCCAAGATCTGACC +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDILKIRG*GGQDLT
Trigger: GGTCAGATCTTGGCCTCCCAAACCCCTTATTTTTAA...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS TCA 90 bp GGACAACCCTTACACAGATGGTCAAGACAAATTTCCTCTGAGTCATaGTCATCCACCCTAGAAGATGTGGTACTTGTGACATCAGATAAA +
Preference number: 5 (lower is better)
Translates to: GQPLHRWSRQISSES*SSTLEDVVLVTSDK
Trigger: TTTATCTGATGTCACAAGTACCACATCTTCTAGGGTGGATGATCATGACTCAGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242351.10
ENST00000460845.5
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTTTCTTCTGCATGTGCTaGCTGTTGCAGATGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSFFCMC*LLQMSW
Trigger: CCAGGACATCTGCAACAGCAAGCACATGCAGAAGAA...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAACCGATCTCTACTCTaGCTTCTAGCCCTATATGCC +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAINRSLL*LLALYA
Trigger: GGCATATAGGGCTAGAAGCAAGAGTAGAGATCGGTT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCAAACCGATCTCTACTCTaGCTTCTAGCCCTATATGCC +
Preference number: 5 (lower is better)
Translates to: ESYNESPTATFPLKSLQSNRSLL*LLALYA
Trigger: GGCATATAGGGCTAGAAGCAAGAGTAGAGATCGGTT...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAGTTGGGGGCTGATGTaGAATTGGAAGCAAGGTAAG +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAISWGLM*NWKQGK
Trigger: CTTACCTTGCTTCCAATTCAACATCAGCCCCCAACT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAAAACCCAGTATATATGATTATTCCTTAGGTGTACTGCATCAATCCAGCTCTACAGAATTGGCTGGCTaGGTGACAGAAGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: QKPSIYDYSLGVLHQSSSTELAG*VTEEGV
Trigger: CACTCCTTCTTCTGTCACCAAGCCAGCCAATTCTGT...AGAGCTGGATTGATGCAGTACACCTAAGGAATAATCATATATACTGGGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGTGTCTGAATCATCCCTaGGAAACTCAGCTCATAGTT +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSECLNHP*ETQLIV
Trigger: AACTATGAGCTGAGTTTCCAAGGGATGATTCAGACA...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTAACATAACGACGTTTTaGGCATCATACGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSNITTF*ASYGQF
Trigger: AAATTGCCCGTATGATGCCAAAAACGTCGTTATGTT...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCTAATCACGCAGGCTTaGTCTTCAGTATATTCAATC +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWLITQA*SSVYSI
Trigger: GATTGAATATACTGAAGACAAAGCCTGCGTGATTAG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCCTGGGCATCAGAATTaGTTTAAAACCTCCCAGATG +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARPGHQN*FKTSQM
Trigger: CATCTGGGAGGTTTTAAACAAATTCTGATGCCCAGG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTATTAACTCCAGTTGGTaGCTTCTCTCTGAGCCTTAC +
Preference number: 5 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPINSSW*LLSEPY
Trigger: GTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAAT...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTGTTCTGTTTATCAGTTATGCTaGTGTGAAGCTGGTTATTGC +
Preference number: 5 (lower is better)
Translates to: HLEKEAPGRHRASLGYCSVYQLC*CEAGYC
Trigger: GCAATAACCAGCTTCACACAAGCATAACTGATAAAC...AGAACAATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTAGACACAGGGCCTCTTaGGGATATTGTTCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIRHRAS*GYCSLF
Trigger: GAACAAAGAACAATATCCCAAAGAGGCCCTGTGTCT...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTAGGCAGAAATGCCCATaGAAAACCACTGAACTAGCT +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARRQKCP*KTTELA
Trigger: AGCTAGTTCAGTGGTTTTCAATGGGCATTTCTGCCT...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGATATCTTTTTCTGCCTaGACTGCCATTGTTAAGCCA +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWISFSA*TAIVKP
Trigger: TGGCTTAACAATGGCAGTCAAGGCAGAAAAAGATAT...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAACTGCTAATTCCTCTTaGTTCAGTCCAGAGAGTTCG +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAITANSS*FSPESS
Trigger: CGAACTCTCTGGACTGAACAAAGAGGAATTAGCAGT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTAGACGCAAGAAATTCTaGGCTGCCCTGAAAGAACCG +
Preference number: 5 (lower is better)
Translates to: FQKENSFSDLVSFQSHHARRKKF*AALKEP
Trigger: CGGTTCTTTCAGGGCAGCCAAGAATTTCTTGCGTCT...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471652.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTCAATACCAAATCCATTaGGTGGTGAAGACAGAATTG +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAQYQIH*VVKTEL
Trigger: CAATTCTGTCTTCACCACCAAATGGATTTGGTATTG...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTGTCTGAATCATCCCTaGGAAACTCAGCTCATAGTT +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARCLNHP*ETQLIV
Trigger: AACTATGAGCTGAGTTTCCAAGGGATGATTCAGACA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACCTTTCCAACCAGAACTaGGGCTACAAACATAACGAC +
Preference number: 5 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYLSNQN*GYKHND
Trigger: GTCGTTATGTTTGTAGCCCAAGTTCTGGTTGGAAAG...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGCTAATCACGCAGGCTTaGTCTTCAGTATATTCAATC +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSELITQA*SSVYSI
Trigger: GATTGAATATACTGAAGACAAAGCCTGCGTGATTAG...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTAAACTTTCCAACACATaGGAATCATCAGAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIKLSNT*ESSEGL
Trigger: AAGCCCTTCTGATGATTCCAATGTGTTGGAAAGTTT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAATTAACTCCAGTTGGTaGCTTCTCTCTGAGCCTTAC +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIINSSW*LLSEPY
Trigger: GTAAGGCTCAGAGAGAAGCAACCAACTGGAGTTAAT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTGGCCTCTTTGGGATATaGTTCTTTGTTCTGATTCTG +
Preference number: 5 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPGLFGI*FFVLIL
Trigger: CAGAATCAGAACAAAGAACAATATCCCAAAGAGGCC...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTTTACAGACACAGGGCCTCTTaGGGATATTGTTCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: RMIRYSTAAMSAIALQFYRHRAS*GYCSLF
Trigger: GAACAAAGAACAATATCCCAAAGAGGCCCTGTGTCT...GTAAAATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AAGGAAGGAAATATTGGTCCAAGCACGTCAAGGGCTCTAAGTAAAAACCGATGGCATAATCCATTACATTaGGAAAAAGAAGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: KEGNIGPSTSRALSKNRWHNPLH*EKEAPG
Trigger: ACCAGGAGCTTCTTTTTCCAAATGTAATGGATTATG...CCATCGGTTTTTACTTAGAGCCCTTGACGTGCTTGGACCAATATTTCCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGTGTCTAATGGGCTGTaGGAAAGAGTTGGACAAACT +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIVSNGL*ERVGQT
Trigger: AGTTTGTCCAACTCTTTCCAACAGCCCATTAGACAC...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAGGTAGGACCTACAGCTaGTCCGAGAGAGTAACTCAT +
Preference number: 5 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIGRTYS*SERVTH
Trigger: ATGAGTTACTCTCTCGGACAAGCTGTAGGTCCTACC...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTTACCACAACTGTGTATaGAAGATGTCATTTGCCATG +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAYHNCV*KMSFAM
Trigger: CATGGCAAATGACATCTTCAATACACAGTTGTGGTA...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680309.1
CDS TCA 90 bp TATATTCAATCACATATTGTGGGTAAACCTGATCTTTCTGAAAGATaGCAAAAACGGAGGGATTCGATCTGGTATCCACACAGCTGTCGA +
Preference number: 5 (lower is better)
Translates to: YIQSHIVGKPDLSER*QKRRDSIWYPHSCR
Trigger: TCGACAGCTGTGTGGATACCAGATCGAATCCCTCCGTTTTTGTCATCTTTCAGAAAGATCAGGTTTACCCACAATATGTGATTGAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS CCA 90 bp CTCGTGTACGTTATATTTCCTTCAGTAAACTTTCCAACCAGAACTTaGGCTACAAACATAACGACGTTTTTGGCATCATACGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: LVYVIFPSVNFPTRT*ATNITTFLASYGQF
Trigger: AAATTGCCCGTATGATGCCAAAAACGTCGTTATGTTTGTAGCCCAAGTTCTGGTTGGAAAGTTTACTGAAGGAAATATAACGTACACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCAGATGGAAGTGGACTTaGCTGCAGCTACCATTAAGC +
Preference number: 5 (lower is better)
Translates to: FKIPSINIISHQNPCSNSRWKWT*LQLPLS
Trigger: GCTTAATGGTAGCTGCAGCAAAGTCCACTTCCATCT...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTCAATACCAAATCCATTaGGTGGTGAAGACAGAATTG +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARQYQIH*VVKTEL
Trigger: CAATTCTGTCTTCACCACCAAATGGATTTGGTATTG...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAGCACTTCAATTCAATACCAAATCCATTaGGTGGTGAAGACAGAATTG +
Preference number: 5 (lower is better)
Translates to: HQNDKVQYCSHVCNSTSIQYQIH*VVKTEL
Trigger: CAATTCTGTCTTCACCACCAAATGGATTTGGTATTG...AATTGAAGTGCTATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp ACTTGCCAAGACTACAATAGCACTCGCGTTTATCAGTTATGCTTGTGTGAAGCTATGAAGAGTCGACGTTaGAATTTTTCCGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: TCQDYNSTRVYQLCLCEAMKSRR*NFSVCL
Trigger: AAGACAAACGGAAAAATTCAAACGTCGACTCTTCAT...AGCTTCACACAAGCATAACTGATAAACGCGAGTGCTATTGTAGTCTTGGCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp AATGCAAATGGAAACTGCAGAGTAATGCAAACAGGAACTTTTCAGGAAAACAGGTGTCTGAATCATCCCTaGGAAACTCAGCTCATAGTT +
Preference number: 5 (lower is better)
Translates to: NANGNCRVMQTGTFQENRCLNHP*ETQLIV
Trigger: AACTATGAGCTGAGTTTCCAAGGGATGATTCAGACA...CCTGTTTTCCTGAAAAGTTCCTGTTTGCATTACTCTGCAGTTTCCATTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTGACAGGAGAGAAAGGTaGCTGCAATTACAGAAAATT +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARDRRER*LQLQKI
Trigger: AATTTTCTGTAATTGCAGCAACCTTTCTCTCCTGTC...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CATTACATTTGGAAAAAGAAGCTCCTGGTAGACACAGGGCCTCTTTGGGATATTATGGAGAGTTCCACTTaGGACATATTGAATCAAAGA +
Preference number: 5 (lower is better)
Translates to: HYIWKKKLLVDTGPLWDIMESST*DILNQR
Trigger: TCTTTGATTCAATATGTCCAAAGTGGAACTCTCCAT...AATATCCCAAAGAGGCCCTGTGTCTACCAGGAGCTTCTTTTTCCAAATGTAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp TCAGAAGGAAAAACCTGGTTCATAAGAAGGAAGGAAATATTGGTCCAAGCACGTTTCATTTTCCTGTACTaGTTTACAGGAAGTAGCCTC +
Preference number: 5 (lower is better)
Translates to: SEGKTWFIRRKEILVQARFIFLY*FTGSSL
Trigger: GAGGCTACTTCCTGTAAACAAGTACAGGAAAATGAA...ACGTGCTTGGACCAATATTTCCTTCCTTCTTATGAACCAGGTTTTTCCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp TTATACAAAGAGCCCAAATGGGCAATTAACTCCAGTTGGTTGCTTCTCTCTGAGAGTTTTATCCACTACTaGACTAGAGCCATTTGGTAT +
Preference number: 5 (lower is better)
Translates to: LYKEPKWAINSSWLLLSESFIHY*TRAIWY
Trigger: ATACCAAATGGCTCTAGTCAAGTAGTGGATAAAACT...CTCAGAGAGAAGCAACCAACTGGAGTTAATTGCCCATTTGGGCTCTTTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR CAA 90 bp AATGATTTCATTGGCATGGGGTGCAACCTGGGCATCAGAATTTGTTTAAAACCTTCTGATGACATCCTTTaGAGTTTTGGAAGCTATGTT +
Preference number: 5 (lower is better)
Translates to: NDFIGMGCNLGIRICLKPSDDIL*SFGSYV
Trigger: AACATAGCTTCCAAAACTCAAAAGGATGTCATCAGA...AGGTTTTAAACAAATTCTGATGCCCAGGTTGCACCCCATGCCAATGAAATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATAAACATAACGACGTTTTaGGCATCATACGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAINITTF*ASYGQF
Trigger: AAATTGCCCGTATGATGCCAAAAACGTCGTTATGTT...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS CCA 90 bp ACTAATCACGCAGGCTTTGTCTTCAGTATATTCAATCACATATTGTaGGTAAACCTGATCTTTCTGAAAGATGACAAAAACGGAGGGATT +
Preference number: 5 (lower is better)
Translates to: TNHAGFVFSIFNHIL*VNLIFLKDDKNGGI
Trigger: AATCCCTCCGTTTTTGTCATCTTTCAGAAAGATCAGGTTTACCCACAATATGTGATTGAATATACTGAAGACAAAGCCTGCGTGATTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS-3UTR CAA 90 bp GAGAGTTACAATGAATCCCCCACAGCAACATTTCCTTTAAAATCCCTTCAATCAATGAAGAGTCGACGTTaGAATTTTTCCGTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: ESYNESPTATFPLKSLQSMKSRR*NFSVCL
Trigger: AAGACAAACGGAAAAATTCAAACGTCGACTCTTCAT...TGATTGAAGGGATTTTAAAGGAAATGTTGCTGTGGGGGATTCATTGTAACTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTGTCTGAATCATCCCTaGGAAACTCAGCTCATAGTT +
Preference number: 5 (lower is better)
Translates to: FKIPSINIISHQNPCSNSCLNHP*ETQLIV
Trigger: AACTATGAGCTGAGTTTCCAAGGGATGATTCAGACA...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp CAAATCAGTTTCATCAGAATGATAAGGTACAGTACTGCAGCCATGTCTGCAATACAAAGTGTCTTCCCTTaGTATTTACCGTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: QISFIRMIRYSTAAMSAIQSVFP*YLPLTS
Trigger: ACTTGTTAACGGTAAATACAAAGGGAAGACACTTTG...TATTGCAGACATGGCTGCAGTACTGTACCTTATCATTCTGATGAAACTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR CAA 90 bp TTTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCCAATACCAAATCCATTaGGTGGTGAAGACAGAATTG +
Preference number: 5 (lower is better)
Translates to: FKIPSINIISHQNPCSNSQYQIH*VVKTEL
Trigger: CAATTCTGTCTTCACCACCAAATGGATTTGGTATTG...GCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp TTAAAATCCCTTCAATCAATATTATCTCTCACCAAAACCCTTGCTCTAACAGCTCAATACCAAATCCATTaGGTGGTGAAGACAGAATTG +
Preference number: 5 (lower is better)
Translates to: LKSLQSILSLTKTLALTAQYQIH*VVKTEL
Trigger: CAATTCTGTCTTCACCACCAAATGGATTTGGTATTG...AGCTGTTAGAGCAAGGGTTTTGGTGAGAGATAATATTGATTGAAGGGATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATAAACATAACGACGTTTTaGGCATCATACGGGCAATTT +
Preference number: 5 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCINITTF*ASYGQF
Trigger: AAATTGCCCGTATGATGCCAAAAACGTCGTTATGTT...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACTAATCACGCAGGCTTaGTCTTCAGTATATTCAATC +
Preference number: 5 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCILITQA*SSVYSI
Trigger: GATTGAATATACTGAAGACAAAGCCTGCGTGATTAG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS CCA 90 bp TTTTTCTACATCAGTAGTTTTATCCACTACTTGACTAGAGCCATTTaGTATATCATGAACAAATGTACTAGCCCAAAGTGTCTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: FFYISSFIHYLTRAI*YIMNKCTSPKCLPF
Trigger: AAAGGGAAGACACTTTGGGCTAGTACATTTGTTCATGATATACCAAATGGCTCTAGTCAAGTAGTGGATAAAACTACTGATGTAGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS-3UTR CAA 90 bp TTTCAGAAAGAAAATTCATTTTCCGATCTAGTATCCTTTCAGTCACACCATGCTTCTGATGACATCCTTTaGAGTTTTGGAAGCTATGTT +
Preference number: 5 (lower is better)
Translates to: FQKENSFSDLVSFQSHHASDDIL*SFGSYV
Trigger: AACATAGCTTCCAAAACTCAAAAGGATGTCATCAGA...AGCATGGTGTGACTGAAAGGATACTAGATCGGAAAATGAATTTTCTTTCTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS-3UTR CAA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACATAATCCATTACATTaGGAAAAAGAAGCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCIHNPLH*EKEAPG
Trigger: ACCAGGAGCTTCTTTTTCCAAATGTAATGGATTATG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS-3UTR CAA 90 bp GCAAGAATATATCCTCATTTTCTCCACTTCGACAACTGTACATTTTCTTGCATACTTTATCCTGAAGACTaGATGTGTGTTTTGAATGTG +
Preference number: 5 (lower is better)
Translates to: ARIYPHFLHFDNCTFSCILYPED*MCVLNV
Trigger: CACATTCAAAACACACATCAAGTCTTCAGGATAAAG...TATGCAAGAAAATGTACAGTTGTCGAAGTGGAGAAAATGAGGATATATTCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000242351.10
CDS CCA 72 bp CAAGTGTCCAGGGGCGGGCGCGGGCGGTGCTACTGCTaGGCGCGCCCGGAGTCAGCGAGGGCGCGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: QVSRGGRGRCYC*ARPESARARSP
Trigger: CGGAGAGCGCGCCCTCGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCGCCCGCCCCTGGACACTTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 72 bp CAGCACACCTCCGGGTCCGCCATGGCGCGCTGGCTGTaGTGGCTCTGCCGCGGCGCGGGACTCGGTTCCGCG +
Preference number: 6 (lower is better)
Translates to: QHTSGSAMARWL*WLCRGAGLGSA
Trigger: CGCGGAACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGGTGTGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 72 bp TTACAAGTGTCCAGGGGCGGGCGCGGGCGGTGCTACTaGTGGGCGCGCCCGGAGTCAGCGAGGGCGCGCTCT +
Preference number: 6 (lower is better)
Translates to: LQVSRGGRGRCY*WARPESARARS
Trigger: AGAGCGCGCCCTCGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCGCCCGCCCCTGGACACTTGTAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 72 bp TCCGGGTCCGCCATGGCGCGCTGGCTGTGCTGGCTCTaGCGCGGCGCGGGACTCGGTTCCGCGGAAATCGGA +
Preference number: 6 (lower is better)
Translates to: SGSAMARWLCWL*RGAGLGSAEIG
Trigger: TCCGATTTCCGCGGAACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGACCCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 72 bp CGAAACTTACAAGTGTCCAGGGGCGGGCGCGGGCGGTaGTACTGCTGGGCGCGCCCGGAGTCAGCGAGGGCG +
Preference number: 6 (lower is better)
Translates to: RNLQVSRGGRGR*YCWARPESARA
Trigger: CGCCCTCGCTGACTCCGGGCGCGCCCAGCAGTAGCACCGCCCGCGCCCGCCCCTGGACACTTGTAAGTTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS CCA 72 bp ATGAAGCAGCACACCTCCGGGTCCGCCATGGCGCGCTaGCTGTGCTGGCTCTGCCGCGGCGCGGGACTCGGT +
Preference number: 6 (lower is better)
Translates to: MKQHTSGSAMAR*LCWLCRGAGLG
Trigger: ACCGAGTCCCGCGCCGCGGCAGAGCCAGCACAGCCAGCGCGCCATGGCGGACCCGGAGGTGTGCTGCTTCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS TCA 72 bp AGACCCGGGCTCGAGTGGTGGCCACCACCGATCGGGTaGTCCCGGCCTCGCCGCCGGTCTCCAACACCACAA +
Preference number: 6 (lower is better)
Translates to: RPGLEWWPPPIG*SRPRRRSPTPQ
Trigger: TTGTGGTGTTGGAGACCGGCGGCGAGGCCGGGATCACCCGATCGGTGGTGGCCACCACTCGAGCCCGGGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS CCA 72 bp GAACGCGCGGGCAAATCTGCTGGTGACCGCCTGGGGTaGCCCCCTCTCGGTTCTAGGCTCGGCGAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: ERAGKSAGDRLG*PPLGSRLGEGE
Trigger: CTCACCCTCGCCGAGCCTAGAACCGAGAGGGGGCCACCCCAGGCGGTCACCAGCAGATTTGCCCGCGCGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS GCA 72 bp GTCTCCAACACCACAAAGCGGTCGGGCCCGGCCACCTaGAGCACCTCACAGAGCTGCGGCTCAGACAGCGCG +
Preference number: 6 (lower is better)
Translates to: VSNTTKRSGPAT*STSQSCGSDSA
Trigger: CGCGCTGTCTGAGCCGCAGCTCTGTGAGGTGCTGCAGGTGGCCGGGCCCGACCGCTTTGTGGTGTTGGAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS CCA 72 bp AAAGAGAACGCGCGGGCAAATCTGCTGGTGACCGCCTaGGGTGGCCCCCTCTCGGTTCTAGGCTCGGCGAGG +
Preference number: 6 (lower is better)
Translates to: KENARANLLVTA*GGPLSVLGSAR
Trigger: CCTCGCCGAGCCTAGAACCGAGAGGGGGCCACCCCAGGCGGTCACCAGCAGATTTGCCCGCGCGTTCTCTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS TCA 72 bp GCCTTGGACGAGCCTGAGGGAGGCCGAGCGCGATCCTaGCTCCCCAGATACGTGAACTTGCGGGTGAGATCG +
Preference number: 6 (lower is better)
Translates to: ALDEPEGGRARS*LPRYVNLRVRS
Trigger: CGATCTCACCCGCAAGTTCACGTATCTGGGGAGTCAGGATCGCGCTCGGCCTCCCTCAGGCTCGTCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CAA 72 bp CAGAGATGCAGGTTATCGCAGGGTCTCTGGCAGTACTaGCGACGGCAGACCCGGGCTCGAGTGGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: QRCRLSQGLWQY*RRQTRARVVAT
Trigger: GGTGGCCACCACTCGAGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGACCCTGCGATAACCTGCATCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS CAA 90 bp TTGAGTTTGCAGAGATGCAGGTTATCGCAGGGTCTCTGGCAGTACTaGCGACGGCAGACCCGGGCTCGAGTGGTGGCCACCACCGATCGG +
Preference number: 6 (lower is better)
Translates to: LSLQRCRLSQGLWQY*RRQTRARVVATTDR
Trigger: CCGATCGGTGGTGGCCACCACTCGAGCCCGGGTCTGCCGTCGCAAGTACTGCCAGAGACCCTGCGATAACCTGCATCTCTGCAAACTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS TCA 72 bp ACAGGCGCGTCCTCCAGGGAAGCCCTGTGGCTGATCTaGTCTGGACTAGGTGTGCAGGACCTCTCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: TGASSREALWLI*SGLGVQDLSAD
Trigger: GTCTGCTGAGAGGTCCTGCACACCTAGTCCAGATCAGATCAGCCACAGGGCTTCCCTGGAGGACGCGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp TCTGGACCACGTCGGGGTTCAGCCCGTGCTCCCTCATaGTGGCCAGCACCTTTCTGTCCATCAGGTTATGGG +
Preference number: 6 (lower is better)
Translates to: SGPRRGSARAPS*WPAPFCPSGYG
Trigger: CCCATAACCTGATGGACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGACGTGGTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 72 bp TCCTGGATGTTCTGGACCACGTCGGGGTTCAGCCCGTaGTCCCTCATGATGGCCAGCACCTTTCTGTCCATC +
Preference number: 6 (lower is better)
Translates to: SWMFWTTSGFSP*SLMMASTFLSI
Trigger: GATGGACAGAAAGGTGCTGGCCATCATGAGGGAGCACGGGCTGAACCCCGACGTGGTCCAGAACATCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 72 bp GTGGCAGGTTTACAGCCGGCCGCAAGGGCAACTGGGTaGAAAGAAAGAGAACGCGCGGGCAAATCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: VAGLQPAARATG*KERERAGKSAG
Trigger: ACCAGCAGATTTGCCCGCGCGTTCTCTTTCTTTCCACCCAGTTGCCCTTGCGGCCGGCTGTAAACCTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS CCA 72 bp CCTAGTGGCAGGTTTACAGCCGGCCGCAAGGGCAACTaGGTGGAAAGAAAGAGAACGCGCGGGCAAATCTGC +
Preference number: 6 (lower is better)
Translates to: PSGRFTAGRKGN*VERKRTRGQIC
Trigger: GCAGATTTGCCCGCGCGTTCTCTTTCTTTCCACCCAGTTGCCCTTGCGGCCGGCTGTAAACCTGCCACTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242351.10
ENST00000471652.1
CDS TCA 72 bp ACTTGTTCCTCCAAGATCAGTAGCCTTGGACGAGCCTaGGGGAGGCCGAGCGCGATCCTGACTCCCCAGATA +
Preference number: 6 (lower is better)
Translates to: TCSSKISSLGRA*GRPSAILTPQI
Trigger: TATCTGGGGAGTCAGGATCGCGCTCGGCCTCCCTCAGGCTCGTCCAAGGCTACTGATCTTGGAGGAACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 72 bp TGGGCCCTGGGGGATTCTTCTGCATGTGCTTGCTGTTaGAGATGTCCTGGATGTTCTGGACCACGTCGGGGT +
Preference number: 6 (lower is better)
Translates to: WALGDSSACACC*RCPGCSGPRRG
Trigger: ACCCCGACGTGGTCCAGAACATCCAGGACATCTGCAACAGCAAGCACATGCAGAAGAATCCCCCAGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 72 bp CAAGTGCTACTCTTGGGTCAGCATCATCTGCGATTCTaGCAGTGGCCTGGACATCTCGGGAAGCAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: QVLLLGQHHLRF*QWPGHLGKQVQ
Trigger: CTGGACCTGCTTCCCGAGATGTCCAGGCCACTGGCAGAATCGCAGATGATGCTGACCCAAGAGTAGCACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 72 bp GGATTCTTCTGCATGTGCTTGCTGTTGCAGATGTCCTaGATGTTCTGGACCACGTCGGGGTTCAGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: GFFCMCLLLQMS*MFWTTSGFSPC
Trigger: GCACGGGCTGAACCCCGACGTGGTCCAGAACATCCAGGACATCTGCAACAGCAAGCACATGCAGAAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CAA 90 bp ATGGCCAGCACCTTTCTGTCCATCAGGTTATGGGACCGGAGGCAGTaGGGAAAACGACAGTTCCCTCGGGTGAAGTGGTCACAGATGTGG +
Preference number: 6 (lower is better)
Translates to: MASTFLSIRLWDRRQ*GKRQFPRVKWSQMW
Trigger: CCACATCTGTGACCACTTCACCCGAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCATAACCTGATGGACAGAAAGGTGCTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp GCTCGGACTGCGAATAGTTGCACCGGCCCAGCAAGTTaGGTTTGCAGAGATGCAGGTTATCGCAGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: ARTANSCTGPAS*VCRDAGYRRVS
Trigger: AGAGACCCTGCGATAACCTGCATCTCTGCAAACTCAACTTGCTGGGCCGGTGCAACTATTCGCAGTCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
CDS TCA 72 bp GTTCCCTCGGGTGAAGTGGTCACAGATGTGGAGTCTTaGACACGGTGGCTGCTGGTTACAAATCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: VPSGEVVTDVES*TRWLLVTNLLP
Trigger: CGGCAGCAGATTTGTAACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTGACCACTTCACCCGAGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp ACCGGAGGCAGTTGGGAAAACGACAGTTCCCTCGGGTaGAGTGGTCACAGATGTGGAGTCTTGAACACGGTG +
Preference number: 6 (lower is better)
Translates to: TGGSWENDSSLG*SGHRCGVLNTV
Trigger: CACCGTGTTCAAGACTCCACATCTGTGACCACTTCACCCGAGGGAACTGTCGTTTTCCCAACTGCCTCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 72 bp AGGCAGTTGGGAAAACGACAGTTCCCTCGGGTGAAGTaGTCACAGATGTGGAGTCTTGAACACGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: RQLGKRQFPRVK*SQMWSLEHGGC
Trigger: GCAGCCACCGTGTTCAAGACTCCACATCTGTGACCACTTCACCCGAGGGAACTGTCGTTTTCCCAACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp CTGCCGTTCTCTAAAAACCTCTGGCTTGTCCCGGCCTaGCTTGTTCCTCCAAGATCAGTAGCCTTGGACGAG +
Preference number: 6 (lower is better)
Translates to: LPFSKNLWLVPA*LVPPRSVALDE
Trigger: CTCGTCCAAGGCTACTGATCTTGGAGGAACAAGTCAGGCCGGGACAAGCCAGAGGTTTTTAGAGAACGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp TCTTTCTCCTGGCGCCTTGGTCATTCGTCCAGGATGTaGGGCTCTTCCAGTTGGGGGCTGATGTTGAATTGG +
Preference number: 6 (lower is better)
Translates to: SFSWRLGHSSRM*GSSSWGLMLNW
Trigger: CCAATTCAACATCAGCCCCCAACTGGAAGAGCCTCACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp CTGAATCATCCCTTGGAAACTCAGCTCATAGTTCCGTaGGCCCGCCTGAAATGGCACAACTCCCCTCGGACA +
Preference number: 6 (lower is better)
Translates to: LNHPLETQLIVP*ARLKWHNSPRT
Trigger: TGTCCGAGGGGAGTTGTGCCATTTCAGGCGGGCTCACGGAACTATGAGCTGAGTTTCCAAGGGATGATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242351.10
ENST00000460845.5
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 72 bp ACCGTTAACAAGTGCTACTCTTGGGTCAGCATCATCTaGGATTCTGCCAGTGGCCTGGACATCTCGGGAAGC +
Preference number: 6 (lower is better)
Translates to: TVNKCYSWVSII*DSASGLDISGS
Trigger: GCTTCCCGAGATGTCCAGGCCACTGGCAGAATCGCAGATGATGCTGACCCAAGAGTAGCACTTGTTAACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS CCA 72 bp AGCGTGGGAGAAAACACAGTCTTTCTCCTGGCGCCTTaGTCATTCGTCCAGGATGTGAGGCTCTTCCAGTTG +
Preference number: 6 (lower is better)
Translates to: SVGENTVFLLAP*SFVQDVRLFQL
Trigger: CAACTGGAAGAGCCTCACATCCTGGACGAATGACCAAGGCGCCAGGAGAAAGACTGTGTTTTCTCCCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CAA 72 bp ACCTTTCTGTCCATCAGGTTATGGGACCGGAGGCAGTaGGGAAAACGACAGTTCCCTCGGGTGAAGTGGTCA +
Preference number: 6 (lower is better)
Translates to: TFLSIRLWDRRQ*GKRQFPRVKWS
Trigger: TGACCACTTCACCCGAGGGAACTGTCGTTTTCCCAACTGCCTCCGGTCCCATAACCTGATGGACAGAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp ATCTGGACTAGGTGTGCAGGACCTCTCAGCAGACGCTaGAGCAGACGCAAGAAATTCTTGGCTGCCCTGAAA +
Preference number: 6 (lower is better)
Translates to: IWTRCAGPLSRR*SRRKKFLAALK
Trigger: TTTCAGGGCAGCCAAGAATTTCTTGCGTCTGCTTCAGCGTCTGCTGAGAGGTCCTGCACACCTAGTCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 72 bp AAGTGGTCACAGATGTGGAGTCTTGAACACGGTGGCTaGTGGTTACAAATCTGCTGCCGACCCTCTCCCTTA +
Preference number: 6 (lower is better)
Translates to: KWSQMWSLEHGG*WLQICCRPSPL
Trigger: TAAGGGAGAGGGTCGGCAGCAGATTTGTAACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTGACCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 72 bp ATCGTTAACAAGTGCTACTCTTGGGTCAGCATCATCTaGGATTCTGCCAGTGGCCTGGACATCTCGGGAAGC +
Preference number: 6 (lower is better)
Translates to: IVNKCYSWVSII*DSASGLDISGS
Trigger: GCTTCCCGAGATGTCCAGGCCACTGGCAGAATCGCAGATGATGCTGACCCAAGAGTAGCACTTGTTAACGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000471652.1
ENST00000680309.1
CDS CCA 72 bp TGTAGTCTGAGGAAAGCAAGCCTGTGCCCTTTCTGGTaGTCACAGCTTCAGGTGTTTGCAGAGAGCCAAGAG +
Preference number: 6 (lower is better)
Translates to: CSLRKASLCPFW*SQLQVFAESQE
Trigger: CTCTTGGCTCTCTGCAAACACCTGAAGCTGTGACCACCAGAAAGGGCACAGGCTTGCTTTCCTCAGACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 72 bp TCCTGTAGTCTGAGGAAAGCAAGCCTGTGCCCTTTCTaGTGGTCACAGCTTCAGGTGTTTGCAGAGAGCCAA +
Preference number: 6 (lower is better)
Translates to: SCSLRKASLCPF*WSQLQVFAESQ
Trigger: TTGGCTCTCTGCAAACACCTGAAGCTGTGACCACCAGAAAGGGCACAGGCTTGCTTTCCTCAGACTACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CAA 72 bp GACGAAAGGTCGCAGTTAAAGACACTGACGAGGTCTTaGCTGGCTGATGGTCTGGCCCTCTCTTCATCTGCT +
Preference number: 6 (lower is better)
Translates to: DERSQLKTLTRS*LADGLALSSSA
Trigger: AGCAGATGAAGAGAGGGCCAGACCATCAGCCAGCAAAGACCTCGTCAGTGTCTTTAACTGCGACCTTTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS GCA 72 bp TGGGGGCTGATGTTGAATTGGAAGCAAGGTAAGTGCTaGCTGGATTTCCATGCAAGAGGTCCTCTTGACTGC +
Preference number: 6 (lower is better)
Translates to: WGLMLNWKQGKC*LDFHARGPLDC
Trigger: GCAGTCAAGAGGACCTCTTGCATGGAAATCCAGGCAGCACTTACCTTGCTTCCAATTCAACATCAGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 72 bp AAACGACAGTTCCCTCGGGTGAAGTGGTCACAGATGTaGAGTCTTGAACACGGTGGCTGCTGGTTACAAATC +
Preference number: 6 (lower is better)
Translates to: KRQFPRVKWSQM*SLEHGGCWLQI
Trigger: GATTTGTAACCAGCAGCCACCGTGTTCAAGACTCCACATCTGTGACCACTTCACCCGAGGGAACTGTCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp GACGCTGAAGCAGACGCAAGAAATTCTTGGCTGCCCTaGAAGAACCGATCTCTACTCTTGCTTCTAGCCCTA +
Preference number: 6 (lower is better)
Translates to: DAEADARNSWLP*KNRSLLLLLAL
Trigger: TAGGGCTAGAAGCAAGAGTAGAGATCGGTTCTTTCAGGGCAGCCAAGAATTTCTTGCGTCTGCTTCAGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS GCA 72 bp AGTTGGGGGCTGATGTTGAATTGGAAGCAAGGTAAGTaGTGCCTGGATTTCCATGCAAGAGGTCCTCTTGAC +
Preference number: 6 (lower is better)
Translates to: SWGLMLNWKQGK*CLDFHARGPLD
Trigger: GTCAAGAGGACCTCTTGCATGGAAATCCAGGCAGCACTTACCTTGCTTCCAATTCAACATCAGCCCCCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CCA 72 bp GGGATTCGATCTGGTATCCACACAGCTGTCGAACTGTaGAGGAGGGCTCGTGTACGTTATATTTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: GIRSGIHTAVEL*RRARVRYISFS
Trigger: ACTGAAGGAAATATAACGTACACGAGCCCTCCTCCACAGTTCGACAGCTGTGTGGATACCAGATCGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 72 bp TGGTCTGGCCCTCTCTTCATCTGCTGCACATACCACTaGGGCACAAATGTTGGTCTTCTGATGACATCCTTT +
Preference number: 6 (lower is better)
Translates to: WSGPLFICCTYH*GTNVGLLMTSF
Trigger: AAAGGATGTCATCAGAAGACCAACATTTGTGCCTCAGTGGTATGTGCAGCAGATGAAGAGAGGGCCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 72 bp TACTCTGGCCCTCTCTTCATCTGCTGCACATACCACTaGGGCACAAATGTTGGTCTTCTGATGACATCCTTT +
Preference number: 6 (lower is better)
Translates to: YSGPLFICCTYH*GTNVGLLMTSF
Trigger: AAAGGATGTCATCAGAAGACCAACATTTGTGCCTCAGTGGTATGTGCAGCAGATGAAGAGAGGGCCAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460845.5
ENST00000471652.1
CDS GCA 72 bp CCAAAGTGTCTTCCCTTTGTATTTACCGTTAACAAGTaGTACTCTTGGGTCAGCATCATCTGCGATTCTGCC +
Preference number: 6 (lower is better)
Translates to: PKCLPFVFTVNK*YSWVSIICDSA
Trigger: GGCAGAATCGCAGATGATGCTGACCCAAGAGTAGCACTTGTTAACGGTAAATACAAAGGGAAGACACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464606.5
CDS TCA 72 bp ACAACCCTTACACAGATGGTCAAGACAAATTTCCTCTaGGTCATGATCATCCACCCTAGAAGATGTGGTACT +
Preference number: 6 (lower is better)
Translates to: TTLTQMVKTNFL*VMIIHPRRCGT
Trigger: AGTACCACATCTTCTAGGGTGGATGATCATGACTCAGAGGAAATTTGTCTTGACCATCTGTGTAAGGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242351.10
ENST00000460845.5
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS TCA 72 bp TTATATTTCTTTGAGGATAGGAAGCAAAAGTCCTCCTaGGGACGAAAGGTCGCAGTTAAAGACACTGACGAG +
Preference number: 6 (lower is better)
Translates to: LYFFEDRKQKSS*GRKVAVKDTDE
Trigger: CTCGTCAGTGTCTTTAACTGCGACCTTTCGTCCTCAGGAGGACTTTTGCTTCCTATCCTCAAAGAAATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 72 bp TCACATATTGTGGGTAAACCTGATCTTTCTGAAAGATaGCAAAAACGGAGGGATTCGATCTGGTATCCACAC +
Preference number: 6 (lower is better)
Translates to: SHIVGKPDLSER*QKRRDSIWYPH
Trigger: GTGTGGATACCAGATCGAATCCCTCCGTTTTTGTCATCTTTCAGAAAGATCAGGTTTACCCACAATATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS CAA 90 bp GCTCGTGTACGTTATATTTCCTTCAGTAAACTTTCCAACCAGAACTaGGGCTACAAACATAACGACGTTTTTGGCATCATACGGGCAATT +
Preference number: 6 (lower is better)
Translates to: ARVRYISFSKLSNQN*GYKHNDVFGIIRAI
Trigger: AATTGCCCGTATGATGCCAAAAACGTCGTTATGTTTGTAGCCCAAGTTCTGGTTGGAAAGTTTACTGAAGGAAATATAACGTACACGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 72 bp ACTGCTAATTCCTCTTTGTTCAGTCCAGAGAGTTCGTaGTTTTTCAGGACTTTGAAGTTCTCTTCTGAGAGA +
Preference number: 6 (lower is better)
Translates to: TANSSLFSPESS*FFRTLKFSSER
Trigger: TCTCTCAGAAGAGAACTTCAAAGTCCTGAAAAATCACGAACTCTCTGGACTGAACAAAGAGGAATTAGCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000471652.1
ENST00000680309.1
CDS CAA 90 bp CTAACTAATCACGCAGGCTTTGTCTTCAGTATATTCAATCACATATaGTGGGTAAACCTGATCTTTCTGAAAGATGACAAAAACGGAGGG +
Preference number: 6 (lower is better)
Translates to: LTNHAGFVFSIFNHI*WVNLIFLKDDKNGG
Trigger: CCCTCCGTTTTTGTCATCTTTCAGAAAGATCAGGTTTACCCACAATATGTGATTGAATATACTGAAGACAAAGCCTGCGTGATTAGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS CAA 72 bp CACGCAGGCTTTGTCTTCAGTATATTCAATCACATATaGTGGGTAAACCTGATCTTTCTGAAAGATGACAAA +
Preference number: 6 (lower is better)
Translates to: HAGFVFSIFNHI*WVNLIFLKDDK
Trigger: TTTGTCATCTTTCAGAAAGATCAGGTTTACCCACAATATGTGATTGAATATACTGAAGACAAAGCCTGCGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS TCA 72 bp AAATGCTCACTTACTCTGACATATTCTGGATGTAGGTaGTGGATCTCTGACAACTTATATTTCTTTGAGGAT +
Preference number: 6 (lower is better)
Translates to: KCSLTLTYSGCR*WISDNLYFFED
Trigger: ATCCTCAAAGAAATATAAGTTGTCAGAGATCCATCACCTACATCCAGAATATGTCAGAGTAAGTGAGCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242351.10
ENST00000464606.5
ENST00000680309.1
CDS CCA 72 bp ATCAGTAGTTTTATCCACTACTTGACTAGAGCCATTTaGTATATCATGAACAAATGTACTAGCCCAAAGTGT +
Preference number: 6 (lower is better)
Translates to: ISSFIHYLTRAI*YIMNKCTSPKC
Trigger: ACACTTTGGGCTAGTACATTTGTTCATGATATACCAAATGGCTCTAGTCAAGTAGTGGATAAAACTACTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464606.5