RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H6 (Homo sapiens)

Ensembl gene IDs: ENSG00000188177

Ensembl transcript IDs: ENST00000343936.4, ENST00000409871.6, ENST00000502881.2

Found 548 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCATCAATATCCAACCTGTATAGAATGTGCAGAGAAGTCAGATCTTaGAGAGGCCCAAGTCTATATAGCTCTAAGGCAGGGAAGTCCTGT +
Preference number: 1 (lower is better)
Translates to: PSISNLYRMCREVRS*RGPSLYSSKAGKSC
Trigger: ACAGGACTTCCCTGCCTTAGAGCTATATAGACTTGGGCCTCTTCAAGATCTGACTTCTCTGCACATTCTATACAGGTTGGATATTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 90 bp ATAGGTATAACCTGGATTTCAGCCCACAGATATTGCTTGTGGATCTaGTGGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCC +
Preference number: 1 (lower is better)
Translates to: IGITWISAHRYCLWI*WKTNNLKPGQLPPA
Trigger: GGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCCATCAGATCCACAAGCAATATCTGTGGGCTGAAATCCAGGTTATACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR CCA 90 bp GCGCACATCATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTaGGGGTTTGAAACATTCAGCTGGGAAATAGAGGGTCCATATAGA +
Preference number: 1 (lower is better)
Translates to: AHIISQLGSFGCSLI*GFETFSWEIEGPYR
Trigger: TCTATATGGACCCTCTATTTCCCAGCTGAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAATGATGTGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 90 bp AACCTCTCAGGAAATTCTACTGTTGTGTCACCAGTGCATGTCATCTaGAGCTTCGTAAAATTGCTAAACCATACAAACCATACCATGTTA +
Preference number: 1 (lower is better)
Translates to: NLSGNSTVVSPVHVI*SFVKLLNHTNHTML
Trigger: TAACATGGTATGGTTTGTATGGTTTAGCAATTTTACGAAGCTTCAGATGACATGCACTGGTGACACAACAGTAGAATTTCCTGAGAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR GCA 90 bp GACATTAAATACTTAAAACACCAGGTAATCCCCTCTGTTACAGAATaGCAGCCGGGTGAGATCTTAAAGAGATTCTTTATTGATAGCCAA +
Preference number: 1 (lower is better)
Translates to: DIKYLKHQVIPSVTE*QPGEILKRFFIDSQ
Trigger: TTGGCTATCAATAAAGAATCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTGTTTTAAGTATTTAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGGTGGGAGAATTGCTTaGACCTGGGAGGCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAGGRIA*TWEAEA
Trigger: AGCCTCCGCCTCCCAGGTTCAAGCAATTCTCCCACC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGGCAGAGGTTGCTGTaGGCTGTACTCCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARQRLL*AVLQPG
Trigger: CCCAGGCTGGAGTACAGCTCACAGCAACCTCTGCCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTATCAGTGGACTGCATaGCTGCAGACCACCCCCACC +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAYQWTA*LQTTPT
Trigger: GGTGGGGGTGGTCTGCAGTCATGCAGTCCACTGATA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTTGAAGCTTGCGGGGTaGGGGACCCTATCAGTGGAC +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALKLAG*GTLSVD
Trigger: GTCCACTGATAGGGTCCCCCACCCCGCAAGCTTCAA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTAAGGTGGGAGAATTaGTTGAACCTGGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALRWEN*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAATTCTCCCACCTTAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACCCTTTCTGAATTCTaGGTGGATGGGGCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATLSEF*VDGAVG
Trigger: ACCCACTGCCCCATCCACCCAGAATTCAGAAAGGGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGGTCGGTGGATCATTTaGGGTCAGGAGTTCGAAATC +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAGRWII*GQEFEI
Trigger: GATTTCGAACTCCTGACCTCAAATGATCCACCGACC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAAGAAGTATGGGGCCTaGCTATCTGCAGAGCTAATT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAKKYGA*LSAELI
Trigger: AATTAGCTCTGCAGATAGTCAGGCCCCATACTTCTT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCTTCTCAAGGGCACTaGTTTCATTCAAGGACTGAT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPSQGH*FHSRTD
Trigger: ATCAGTCCTTGAATGAAAGCAGTGCCCTTGAGAAGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGTCATGGAATACTTCTaGCACACCTGTTTAACGGGT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAVMEYF*HTCLTG
Trigger: ACCCGTTAAACAGGTGTGGCAGAAGTATTCCATGAC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTGGTGGCTCTTATATTaGATGAGCTGGCCACTTTGC +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIWWLLY*MSWPLC
Trigger: GCAAAGTGGCCAGCTCATTCAATATAAGAGCCACCA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTGTTGTGTCACCAGTaGATGTCATCTGAAGCTTCG +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILLCHQ*MSSEAS
Trigger: CGAAGCTTCAGATGACATGCACTGGTGACACAACAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCATAGTGACTGGTAGCTaGCAAAACTTTCTGCAAACC +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAIVTGS*QNFLQT
Trigger: GGTTTGCAGAAAGTTTTGGCAGCTACCAGTCACTAT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCATAAGGAGATACATGTaGGTCCTGTCTCCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAIRRYM*VLSPKA
Trigger: TGCTTTTGGAGACAGGACCCACATGTATCTCCTTAT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTTCCTAATGCAGTCATaGAATACTTCTGCCACACCT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAFLMQS*NTSATP
Trigger: AGGTGTGGCAGAAGTATTCCATGACTGCATTAGGAA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACTCACAATCTTCTTTaGACTCACAGCTCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATHNLL*THSSSL
Trigger: TAAGGAAGAGCTGTGAGTTCAAAGAAGATTGTGAGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTCCATTTCAACCCCCTaGTATATCCACTGTATTCAT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLASISTP*YIHCIH
Trigger: ATGAATACAGTGGATATAGCAGGGGGTTGAAATGGA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGTTGCAGCCTAATTTaGGGGTTTGAAACATTCAGC +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGCSLI*GFETFS
Trigger: GCTGAATGTTTCAAACCCCCAAATTAGGCTGCAACC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGTAAAAGTGACATTTaGATGGATGTCAGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLACKSDI*MDVRKP
Trigger: TGGCTTCCTGACATCCATCCAAATGTCACTTTTACA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCCTAATTTGGGGGTTTaGAACATTCAGCTGGGAAAT +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIPNLGV*NIQLGN
Trigger: ATTTCCCAGCTGAATGTTTCAAACCCCCAAATTAGG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAGAGAAGTCAGATCTTaGAGAGGCCCAAGTCTATAT +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIREVRS*RGPSLY
Trigger: ATATAGACTTGGGCCTCTTCAAGATCTGACTTCTCT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTCTATGTCATGCAAATaGAGAGATTCTGACAGCCTC +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNISMSCK*RDSDSL
Trigger: GAGGCTGTCAGAATCTCTTCATTTGCATGACATAGA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGAAGAGGTATTCATTaGGGGAAAATGGCTACTTAT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARRGIH*GKMATY
Trigger: ATAAGTAGCCATTTTCCCCCAATGAATACCTCTTCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTTTGAAACATTCAGCTaGGAAATAGAGGGTCCATAT +
Preference number: 2 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAFETFS*EIEGPY
Trigger: ATATGGACCCTCTATTTCCCAGCTGAATGTTTCAAA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGACCGCAGTGTGACATaGCTGAAGAAATACATATTA +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIDRSVT*LKKYIL
Trigger: TAATATGTATTTCTTCAGGCATGTCACACTGCGGTC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAAAACAGCAGAGGACTaGGATAGTCACAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: HQVIPSVTECQPGEILKRKTAED*DSHKSE
Trigger: TTCACTCTTGTGACTATCTCAGTCCTCTGCTGTTTT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACCCTCTGTTACAGAATaGCAGCCGGGTGAGATCTTA +
Preference number: 2 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKPSVTE*QPGEIL
Trigger: TAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTTTGAAACATTCAGCTaGGAAATAGAGGGTCCATAT +
Preference number: 2 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIFETFS*EIEGPY
Trigger: ATATGGACCCTCTATTTCCCAGCTGAATGTTTCAAA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAAAACAGCAGAGGACTaGGATAGTCACAAGAGTGAA +
Preference number: 2 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKKTAED*DSHKSE
Trigger: TTCACTCTTGTGACTATCTCAGTCCTCTGCTGTTTT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGAATGCCAGCCGGGTaGGATCTTAAAGAGATTCTT +
Preference number: 2 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFRMPAG*DLKEIL
Trigger: AAGAATCTCTTTAAGATCTCACCCGGCTGGCATTCT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCTTCTCAAGGGCACTaGTTTCATTCAAGGACTGAT +
Preference number: 2 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPSQGH*FHSRTD
Trigger: ATCAGTCCTTGAATGAAAGCAGTGCCCTTGAGAAGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCCATTTCAACCCCCTaGTATATCCACTGTATTCAT +
Preference number: 2 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSISTP*YIHCIH
Trigger: ATGAATACAGTGGATATAGCAGGGGGTTGAAATGGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATTATGAAAGACAACTaGCATATATTCAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIMKDN*HIFRQS
Trigger: ACTCTGCCTGAATATATGCCAGTTGTCTTTCATAAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCATCACAAACAGTATaGATAGCTAAGTTACATCTC +
Preference number: 2 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPSQTV*IAKLHL
Trigger: GAGATGTAACTTAGCTATTCATACTGTTTGTGATGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCATTATGAAAGACAACTaGCATATATTCAGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFIMKDN*HIFRQS
Trigger: ACTCTGCCTGAATATATGCCAGTTGTCTTTCATAAT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGTAAGGCCAGCACTTaGGGAGGCTCAGGTCGGTGG +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLACKAST*GGSGRW
Trigger: CCACCGACCTGAGCCTCCCAAAGTGCTGGCCTTACA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGTAACCCCAACACTTTaGGAGGTTGAGGCGGGTGGA +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAVTPTL*EVEAGG
Trigger: TCCACCCGCCTCAACCTCCAAAAGTGTTGGGGTTAC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 72 bp GGGCCCTGGAGCCCTGGATCTATGCCAAACCCTTTCTaGATTCTGGGTGGATGGGGCAGTGGGTTTAGGGTA +
Preference number: 3 (lower is better)
Translates to: GPWSPGSMPNPF*ILGGWGSGFRV
Trigger: TACCCTAAACCCACTGCCCCATCCACCCAGAATTCAGAAAGGGTTTGGCATAGATCCAGGGCTCCAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCAGAAAGCTCAATTATaGAAGCTTGCGGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAQKAQL*KLAGWG
Trigger: CCCCCACCCCGCAAGCTTCAATAATTGAGCTTTCTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGCAGTGATCCGAGATaGCACCATTACACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLACSDPR*HHYTPA
Trigger: GGCTGGAGTGTAATGGTGCAATCTCGGATCACTGCA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGGCAGGAGAATTGCTaGAACCCAGAGGCAGAGGTT +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARQENC*NPEAEV
Trigger: AACCTCTGCCTCTGGGTTCAAGCAATTCTCCTGCCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGAGTTCAAGATCAGCTaGGCCAACATGGTCAAACCC +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAEFKIS*ANMVKP
Trigger: GGGTTTGACCATGTTGGCCAAGCTGATCTTGAACTC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTGGTGGCTCTTATATaGAATGAGCTGGCCACTTTG +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALVALI*NELATL
Trigger: CAAAGTGGCCAGCTCATTCAATATAAGAGCCACCAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCAGGAAATTCTACTGTaGTGTCACCAGTGCATGTCA +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAQEILL*CHQCMS
Trigger: TGACATGCACTGGTGACACAACAGTAGAATTTCCTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATTAGGCTCTTTCGGTaGCAGCCTAATTTGGGGGTT +
Preference number: 3 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIIRLFR*QPNLGV
Trigger: AACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAAGAAGAGGTATTCATaGGGGGAAAATGGCTACTTA +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAKKRYS*GENGYL
Trigger: TAAGTAGCCATTTTCCCCCAATGAATACCTCTTCTT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGATATGAGACAGCAGTaGCTGAATCTCAATTGTCAT +
Preference number: 3 (lower is better)
Translates to: GKQTILNLDNSRLPPSLADMRQQ*LNLNCH
Trigger: ATGACAATTGAGATTCAGCAACTGCTGTCTCATATC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGATATGAGACAGCAGTaGCTGAATCTCAATTGTCAT +
Preference number: 3 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIDMRQQ*LNLNCH
Trigger: ATGACAATTGAGATTCAGCAACTGCTGTCTCATATC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 72 bp TCCAACCTGTATAGAATGTGCAGAGAAGTCAGATCTTaGAGAGGCCCAAGTCTATATAGCTCTAAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SNLYRMCREVRS*RGPSLYSSKAG
Trigger: CCCTGCCTTAGAGCTATATAGACTTGGGCCTCTTCAAGATCTGACTTCTCTGCACATTCTATACAGGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR GCA 72 bp TTCAAGAAATTAACAGAAAGCTCAATTATTGAAGCTTaGGGGGTGGGGGACCCTATCAGTGGACTGCATGAC +
Preference number: 3 (lower is better)
Translates to: FKKLTESSIIEA*GVGDPISGLHD
Trigger: GTCATGCAGTCCACTGATAGGGTCCCCCACCCCGCAAGCTTCAATAATTGAGCTTTCTGTTAATTTCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 72 bp GTGACTGGTAGCTGCCAAAACTTTCTGCAAACCACATaGAACTGCTTGGGGAGAAGGCATTATGTAAATGCT +
Preference number: 3 (lower is better)
Translates to: VTGSCQNFLQTT*NCLGRRHYVNA
Trigger: AGCATTTACATAATGCCTTCTCCCCAAGCAGTTTCATGTGGTTTGCAGAAAGTTTTGGCAGCTACCAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR CCA 72 bp GGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGCTaGGAAATAGAGGGTCCATATAGAAACAGACCCAAT +
Preference number: 3 (lower is better)
Translates to: GCSLIWGFETFS*EIEGPYRNRPN
Trigger: ATTGGGTCTGTTTCTATATGGACCCTCTATTTCCCAGCTGAATGTTTCAAACCCCCAAATTAGGCTGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR CCA 72 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTaGGGGTTTGAAACATTCAGCTGGGAAATAGAGGGT +
Preference number: 3 (lower is better)
Translates to: ISQLGSFGCSLI*GFETFSWEIEG
Trigger: ACCCTCTATTTCCCAGCTGAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 72 bp TCACTCCAACATCTGATTTGTGTTCAAGGTTCACAATaGGGTCTTAACCAAGATATGAGACAGCAGTTGCTG +
Preference number: 3 (lower is better)
Translates to: SLQHLICVQGSQ*GLNQDMRQQLL
Trigger: CAGCAACTGCTGTCTCATATCTTGGTTAAGACCTCATTGTGAACCTTGAACACAAATCAGATGTTGGAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 72 bp AAGATAATTCAAGAAATTAACAGAAAGCTCAATTATTaGAGCTTGCGGGGTGGGGGACCCTATCAGTGGACT +
Preference number: 3 (lower is better)
Translates to: KIIQEINRKLNY*SLRGGGPYQWT
Trigger: AGTCCACTGATAGGGTCCCCCACCCCGCAAGCTTCAATAATTGAGCTTTCTGTTAATTTCTTGAATTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 72 bp ACCTGGATTTCAGCCCACAGATATTGCTTGTGGATCTaGTGGAAAACAAACAATCTTAAACCTGGACAACTC +
Preference number: 3 (lower is better)
Translates to: TWISAHRYCLWI*WKTNNLKPGQL
Trigger: GAGTTGTCCAGGTTTAAGATTGTTTGTTTTCCATCAGATCCACAAGCAATATCTGTGGGCTGAAATCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTAAGTTACATCTCATaGGATGAGCCTATCCATACT +
Preference number: 3 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLSYIS*DEPIHT
Trigger: AGTATGGATAGGCTCATCCAATGAGATGTAACTTAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR GCA 72 bp TACTTAAAACACCAGGTAATCCCCTCTGTTACAGAATaGCAGCCGGGTGAGATCTTAAAGAGATTCTTTATT +
Preference number: 3 (lower is better)
Translates to: YLKHQVIPSVTE*QPGEILKRFFI
Trigger: AATAAAGAATCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTGTTTTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR TCA 72 bp GAAAACATCTCCACCACAGATTCTATGTCATGCAAATaGAGAGATTCTGACAGCCTCTTTAAGATCTCATAT +
Preference number: 3 (lower is better)
Translates to: ENISTTDSMSCK*RDSDSLFKISY
Trigger: ATATGAGATCTTAAAGAGGCTGTCAGAATCTCTTCATTTGCATGACATAGAATCTGTGGTGGAGATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGGACAACTCCCGCCTaGCCCCGTCCCTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAWTTPA*PRPWPQ
Trigger: TTGGGGCCAGGGACGGGGGCAGGCGGGAGTTGTCCA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCGGGCTCCCCTGTCCTaGCTGCCTTGCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARAPLS*LPCLPW
Trigger: CCAAGGCAGGCAAGGCAGCCAGGACAGGGGAGCCCG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCGCGCTGCCGGCGCTaGCGCTCTAGTCTCTATTCG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPRCRR*RSSLYS
Trigger: CGAATAGAGACTAGAGCGGCAGCGCCGGCAGCGCGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGGGAACGTCCGCCTGTaGGTCAGCTGGCCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAGNVRL*VSWPLK
Trigger: CTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAGCGGGCGGGCGGCGTaGAGCGACGCGGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRSGRAA*SDAGIW
Trigger: CCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGCAACGGCCCCGCGCTaGCGGCGCTGCCGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRATAPR*RRCRSS
Trigger: ACTAGAGCGGCAGCGCCGGCAGCGCGGGGCCGTTGC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCGCCTGTGGGTCAGCTaGCCCCTCAAGAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARLWVS*PLKSDS
Trigger: GGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGGAGGTCCTGCACATaGGTGATGTCCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARRSCT*VMSRGA
Trigger: GGCTCCCCTGGACATCACCCATGTGCAGGACCTCCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGGAACGTCCGCCTGTaGGTCAGCTGGCCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGNVRL*VSWPLK
Trigger: CTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACCGGGATCATTATCTaGGGTCGGGCTCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATGIII*GRAPLS
Trigger: GGACAGGGGAGCCCGACCCCAGATAATGATCCCGGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGCCGCCGCCGACAGGTaGCGAAGTGGTAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAAAADR*RSGKNS
Trigger: TGAGTTTTTACCACTTCGTCACCTGTCGGCGGCGGC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCAGGGGAGCCTGGGTaGATCACAGGACTACTGTGT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPGEPG*ITGLLC
Trigger: ACACAGTAGTCCTGTGATGCACCCAGGCTCCCCTGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTGGGAGGCAGAGGTTaGTGTGAGCTGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALGGRG*CELYSS
Trigger: GCTGGAGTACAGCTCACAGCAACCTCTGCCTCCCAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCAGAAGCCCAACCCCTaGAGGTGGTTTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAQKPNP*RWFGKR
Trigger: CCTCTTCCCAAACCACCTCCAGGGGTTGGGCTTCTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGTGGGAGAATTGCTTaGACCTGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGGRIA*TWEAEA
Trigger: AGCCTCCGCCTCCCAGGTTCAAGCAATTCTCCCACC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGCGGGCGGGCGGCGTaGAGCGACGCGGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSGRAA*SDAGIW
Trigger: CCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGATGGGGCTCTAACTaGAAACACTGGGCAACGGCC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARWGSN*KHWATA
Trigger: GGCCGTTGCCCAGTGTTTGCAGTTAGAGCCCCATCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGGAAGGCTGTGCACTaGTGGGACCTGAACCTTACC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARKAVH*WDLNLT
Trigger: GGTAAGGTTCAGGTCCCAGCAGTGCACAGCCTTCCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCTGGCTGCCTTGCCTaGCTTGGATCACTGTACTGT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPGCLA*LGSLYC
Trigger: ACAGTACAGTGATCCAAGGCAGGCAAGGCAGCCAGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTCTAACTGCAAACACTaGGCAACGGCCCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNISNCKH*ATAPRC
Trigger: GCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGAGTCTGTCATGTTTaGTCAAGAACGGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARVCHV*SRTGRG
Trigger: GCCCCGCCCCGTTCTTGACCAAACATGACAGACTCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAGGAGGTCCTGCACATaGGTGATGTCCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIRRSCT*VMSRGA
Trigger: GGCTCCCCTGGACATCACCCATGTGCAGGACCTCCT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTGCCTTGCCTGCCTTaGATCACTGTACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALPCLP*ITVLWP
Trigger: AGGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGTGGACTGCTTCCCTaGAATTGTGGTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLACGLLP*NCGPGG
Trigger: ACCACCAGGACCACAATTTCAGGGAAGCAGTCCACA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGGACTACTGTGTCCCTaGGACATGTTAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAGLLCP*DMLGPG
Trigger: TCCTGGACCTAACATGTCTCAGGGACACAGTAGTCC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTATCAGTGGACTGCATaGCTGCAGACCACCCCCACC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIYQWTA*LQTTPT
Trigger: GGTGGGGGTGGTCTGCAGTCATGCAGTCCACTGATA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGACTGGTGGATCACTTaGGGCCAGGAGTTCAAGATC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLADWWIT*GQEFKI
Trigger: GATCTTGAACTCCTGGCCTCAAGTGATCCACCAGTC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCATGCCAAACCCTTTCTaGATTCTGGGTGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAMPNPF*ILGGWG
Trigger: GCCCCATCCACCCAGAATTCAGAAAGGGTTTGGCAT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTGGGAGGCAGAGGTTaGTGTGAGCTGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILGGRG*CELYSS
Trigger: GCTGGAGTACAGCTCACAGCAACCTCTGCCTCCCAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATGTCCTGGAAAGCCTaGGGAGTGGTAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIMSWKA*GVVSPT
Trigger: GGTGGGGCTTACCACTCCCCAGGCTTTCCAGGACAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGCAGGGAGGAGGCCTaGTACAGGCAGAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRCREEA*YRQRAM
Trigger: CATGGCCCTCTGCCTGTACCAGGCCTCCTCCCTGCA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACGCCTGTGGGTCAGCTaGCCCCTCAAGAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRRLWVS*PLKSDS
Trigger: GGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACAGAAGAGCCTATGTaGCCACTTCCATTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATEEPM*PLPFPL
Trigger: GAGAGGGAATGGAAGTGGTCACATAGGCTCTTCTGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTTTGATCTGGGTAAGTaGGGGGCACCCTTTGATGCA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAFDLGK*GAPFDA
Trigger: TGCATCAAAGGGTGCCCCTCACTTACCCAGATCAAA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACTGGCCCCTCAAGAGTaGCTCCCACGTTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRLAPQE*LPRLDW
Trigger: CCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGAAAGCTCAATTATTaGAGCTTGCGGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARKLNY*SLRGGG
Trigger: TCCCCCACCCCGCAAGCTTCAATAATTGAGCTTTCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAACACTTTTGGAGGTTaGGGCGGGTGGATCACCTGG +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNINTFGG*GGWITW
Trigger: CCAGGTGATCCACCCGCCTCAACCTCCAAAAGTGTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAGATGGGGCTCTAACTaGAAACACTGGGCAACGGCC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIRWGSN*KHWATA
Trigger: GGCCGTTGCCCAGTGTTTGCAGTTAGAGCCCCATCT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCATCTTCTCTGTCGTaGCCTGCATGTTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPSSLS*PACSES
Trigger: AGACTCTGAACATGCAGGGCACGACAGAGAAGATGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCACCCTATCAGTGGACTaGATGACTGCAGACCACCCC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNITLSVD*MTADHP
Trigger: GGGGTGGTCTGCAGTCATGCAGTCCACTGATAGGGT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTCAATTATTGAAGCTTaGGGGGTGGGGGACCCTATC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLASIIEA*GVGDPI
Trigger: GATAGGGTCCCCCACCCCGCAAGCTTCAATAATTGA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAGCGACGCGGGGATTTaGACAGTGGCCGTAACGGTG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRSDAGI*TVAVTV
Trigger: CACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATCTATTCGCCGCCGGTaGCTGTGGCGTGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSIRRR*LWRGSG
Trigger: CCCGCTCCCACGCCACAGCCACCGGCGGCGAATAGA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAATGCTCTGGAGGGGTTaGCAGAAGCCCAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRMLWRG*QKPNPW
Trigger: CCAGGGGTTGGGCTTCTGCCAACCCCTCCAGAGCAT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGCCCCACCCATACTTaGTGGTGTCAAAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLASPTHT*WCQRCV
Trigger: GACACATCTTTGACACCACCAAGTATGGGTGGGGCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCACAGGAGGCTGCTGCTaGGCAAATTCACCATGCCAC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNITGGCC*ANSPCH
Trigger: GTGGCATGGTGAATTTGCCCAGCAGCAGCCTCCTGT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGTCTTCACATTGCTTaGGCTGAGGGTGGGGACAAA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLACLHIA*AEGGDK
Trigger: TTTGTCCCCACCCTCAGCCCAAGCAATGTGAAGACA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAATAACAAAATGACCTaGGCCCTGGAGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLANNKMT*ALEPWI
Trigger: GATCCAGGGCTCCAGGGCCCAGGTCATTTTGTTATT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGCCCTGCCTAGACTGTaGAGGACAAAAGCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIALPRL*RTKALD
Trigger: GTCTAGGGCTTTTGTCCTCCACAGTCTAGGCAGGGC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGAACCTGGAGAACAGTaGTTCTCTCTGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAEPGEQ*FSLGTF
Trigger: GAAAGTACCCAGAGAGAATCACTGTTCTCCAGGTTC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTTGCTTGGTGCCCTATaGGGTTGGGTGCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILLGAL*GWVLVC
Trigger: ACAAACCAGCACCCAACCTCATAGGGCACCAAGCAA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTTTCTGCAAACCACATaGAACTGCTTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAFLQTT*NCLGRR
Trigger: CCTTCTCCCCAAGCAGTTTCATGTGGTTTGCAGAAA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACCAGGGGAGCCTGGGTaGATCACAGGACTACTGTGT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRPGEPG*ITGLLC
Trigger: ACACAGTAGTCCTGTGATGCACCCAGGCTCCCCTGG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAGTGGACTGCATGACTaGAGACCACCCCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRSGLHD*RPPPPR
Trigger: CCTTGGTGGGGGTGGTCTGCAGTCATGCAGTCCACT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTAAGGTGGGAGAATTaGTTGAACCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILRWEN*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAATTCTCCCACCTTAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCATACAAAGATGCCCTaGCTAGACTGTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAHTKMP*LDCGGQ
Trigger: TTGTCCTCCACAGTCTAGGCAGGGCATCTTTGTATG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATTCTCCTCACCAACATaGCGGCACCCGAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRFSSPT*RHPKQA
Trigger: CGCCTGTTTCGGGTGCCGCCATGTTGGTGAGGAGAA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCACCACGCCAGAGAGATaGGGCTCTAACTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNITTPER*GSNCKH
Trigger: GTGTTTGCAGTTAGAGCCCCATCTCTCTGGCGTGGT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCCCAACCCCTGGAGGTaGTTTGGGAAGAGGAGTTAT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIPNPWR*FGKRSY
Trigger: ATAACTCCTCTTCCCAAACCACCTCCAGGGGTTGGG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACAGAAGCCCAACCCCTaGAGGTGGTTTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRQKPNP*RWFGKR
Trigger: CCTCTTCCCAAACCACCTCCAGGGGTTGGGCTTCTG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAAAGGGAAAATGCTCTaGAGGGGTTGGCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIKGKML*RGWQKP
Trigger: GGGCTTCTGCCAACCCCTCCAGAGCATTTTCCCTTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGTGACTCCCACGTTTaGACTGGGTTTTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLASDSHV*TGFLWK
Trigger: CTTCCACAAAAACCCAGTCCAAACGTGGGAGTCACT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACCTTACCAGAACTCCTaGGAACGTCCGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRPYQNS*ERPPVG
Trigger: ACCCACAGGCGGACGTTCCCAGGAGTTCTGGTAAGG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAAGGCTGTGCACTGCTaGGACCTGAACCTTACCAGA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIKAVHC*DLNLTR
Trigger: TCTGGTAAGGTTCAGGTCCCAGCAGTGCACAGCCTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATTGAAGCTTGCGGGGTaGGGGACCCTATCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRLKLAG*GTLSVD
Trigger: GTCCACTGATAGGGTCCCCCACCCCGCAAGCTTCAA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCACGTTCTTTTCGTTTaGTTTTCTTCGGCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAHVLFV*FSSASH
Trigger: GTGGCTTGCCGAAGAAAATCAAACGAAAAGAACGTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACTCATAATTGGTGTTaGGCTGCATTTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATHNWC*AAFHQD
Trigger: GTCCTGGTGAAATGCAGCTCAACACCAATTATGAGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGCACTGCTGGGACCTaGACCTTACCAGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRCTAGT*TLPELL
Trigger: CAGGAGTTCTGGTAAGGTTCAGGTCCCAGCAGTGCA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGAATGCCAGCCGGGTaGGATCTTAAAGAGATTCTT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARMPAG*DLKEIL
Trigger: AAGAATCTCTTTAAGATCTCACCCGGCTGGCATTCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAGAAAGCTCAATTATTaGAGCTTGCGGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIRKLNY*SLRGGG
Trigger: TCCCCCACCCCGCAAGCTTCAATAATTGAGCTTTCT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTTCTTCCTTGCTTGGTaGCCTATGAGGTTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIFFLAW*PMRLGA
Trigger: AGCACCCAACCTCATAGGGCACCAAGCAAGGAAGAA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGGCTTTCTAATGTCTTaGCTTGGGATAGTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAGFLMS*LGIVLS
Trigger: GCTTAGGACTATCCCAAGGCAAGACATTAGAAAGCC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCCCTCTGTTACAGAATaGCAGCCGGGTGAGATCTTA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIPSVTE*QPGEIL
Trigger: TAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTTAGGCTCTTTCGGTTaGAGCCTAATTTGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALGSFG*SLIWGF
Trigger: AAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGCAGTGATCCGAGATTaGACCATTACACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIAVIRD*TITLQP
Trigger: AGGCTGGAGTGTAATGGTGCAATCTCGGATCACTGC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCAAAGTATACCCCCTTaGTGGTGTCTTTTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAQSIPP*WCLLSR
Trigger: TCTGCTCAAAAGACACCAGCAAGGGGGTATACTTTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAACAGGAGGCTGCTGCTaGGCAAATTCACCATGCCAC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRTGGCC*ANSPCH
Trigger: GTGGCATGGTGAATTTGCCCAGCAGCAGCCTCCTGT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGCAGGGAGGAGGCCTaGTACAGGCAGAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKCREEA*YRQRAM
Trigger: CATGGCCCTCTGCCTGTACCAGGCCTCCTCCCTGCA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTCTTTAGCAAGTCTTaGATCAGTAGGAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALFSKS*ISRSAE
Trigger: CTCAGCACTCCTACTGATCCAAGACTTGCTAAAGAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTCCCACGTTTGGACTaGGTTTTTGTGGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILPRLD*VFVEGW
Trigger: CCATCCTTCCACAAAAACCCAGTCCAAACGTGGGAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCGGGCTCCCCTGTCCTaGCTGCCTTGCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFRAPLS*LPCLPW
Trigger: CCAAGGCAGGCAAGGCAGCCAGGACAGGGGAGCCCG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGGTTGCAGCCTAATTTaGGGGTTTGAAACATTCAGC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAGCSLI*GFETFS
Trigger: GCTGAATGTTTCAAACCCCCAAATTAGGCTGCAACC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGGGCCCTGGAGCCCTaGATCTATGCCAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRWALEP*IYAKPF
Trigger: AAAGGGTTTGGCATAGATCCAGGGCTCCAGGGCCCA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGTTATGTAGCTTCCTaGTATATGTCCACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLACYVAS*YMSTLS
Trigger: ACTCAGCGTGGACATATATCAGGAAGCTACATAACA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGGTTAGGTGAGTCTTaGACAACAGGAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRWLGES*TTGGCC
Trigger: GCAGCAGCCTCCTGTTGTTCAAGACTCACCTAACCA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATTGCTTGGTGCCCTATaGGGTTGGGTGCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRLLGAL*GWVLVC
Trigger: ACAAACCAGCACCCAACCTCATAGGGCACCAAGCAA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGTGGATGATGAACCGTaGTCCCTAGGGTCATACAAA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIVDDEP*SLGSYK
Trigger: TTTGTATGACCCTAGGGATCACGGTTCATCATCCAC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAAAACAGCAGAGGACTaGGATAGTCACAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAKTAED*DSHKSE
Trigger: TTCACTCTTGTGACTATCTCAGTCCTCTGCTGTTTT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCAGTGCATGTCATCTaGAGCTTCGTAAAATTGCTA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPVHVI*SFVKLL
Trigger: TAGCAATTTTACGAAGCTTCAGATGACATGCACTGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGGTGGGAGAATTGCTTaGACCTGGGAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKGGRIA*TWEAEA
Trigger: AGCCTCCGCCTCCCAGGTTCAAGCAATTCTCCCACC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGGCAGAGGTTGCTGTaGGCTGTACTCCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKRQRLL*AVLQPG
Trigger: CCCAGGCTGGAGTACAGCTCACAGCAACCTCTGCCT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCGCGCTGCCGGCGCTaGCGCTCTAGTCTCTATTCG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPRCRR*RSSLYS
Trigger: CGAATAGAGACTAGAGCGGCAGCGCCGGCAGCGCGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCATTTCACCAGGACTTTaGTGGTATGATGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAISPGL*WYDEPG
Trigger: TCCAGGTTCATCATACCAGCAAAGTCCTGGTGAAAT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTATCATCTTCTTCCTTaGTTGGTGCCCTATGAGGTT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAYHLLP*LVPYEV
Trigger: AACCTCATAGGGCACCAAGCAAGGAAGAAGATGATA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGAGCCCTGGATCTATaGCAAACCCTTTCTGAATTC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGALDL*QTLSEF
Trigger: GAATTCAGAAAGGGTTTGGCATAGATCCAGGGCTCC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGCGACGCGGGGATTTaGACAGTGGCCGTAACGGTG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSDAGI*TVAVTV
Trigger: CACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATCTAACTGCAAACACTaGGCAACGGCCCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSNCKH*ATAPRC
Trigger: GCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAACCACGCCAGAGAGATaGGGCTCTAACTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRTTPER*GSNCKH
Trigger: GTGTTTGCAGTTAGAGCCCCATCTCTCTGGCGTGGT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATGCTCTGGAGGGGTTaGCAGAAGCCCAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKMLWRG*QKPNPW
Trigger: CCAGGGGTTGGGCTTCTGCCAACCCCTCCAGAGCAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAAAGGGAAAATGCTCTaGAGGGGTTGGCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRKGKML*RGWQKP
Trigger: GGGCTTCTGCCAACCCCTCCAGAGCATTTTCCCTTT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCATCGTAAAACTCAGCTaGGTTTTGCAGGGACTCATA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAIVKLS*VLQGLI
Trigger: TATGAGTCCCTGCAAAACCCAGCTGAGTTTTACGAT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATCTTCTTCCTTGCTTaGTGCCCTATGAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIIFFLA*CPMRLG
Trigger: ACCCAACCTCATAGGGCACCAAGCAAGGAAGAAGAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAACCAGGGTTTGATCTaGGTAAGTGAGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRNQGLI*VSEGHP
Trigger: AGGGTGCCCCTCACTTACCCAGATCAAACCCTGGTT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAAGGCTGTGCACTGCTaGGACCTGAACCTTACCAGA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRKAVHC*DLNLTR
Trigger: TCTGGTAAGGTTCAGGTCCCAGCAGTGCACAGCCTT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATGAGCCAAGAAGTATaGGGCCTGACTATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIMSQEV*GLTICR
Trigger: TCTGCAGATAGTCAGGCCCCATACTTCTTGGCTCAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTGTATTGTTTCAGCTaGTTGGCAAAATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALYCFS*LAKSSS
Trigger: AGAGGAAGATTTTGCCAATCAGCTGAAACAATACAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAACTCCCATGGTTAGGTaGGTCTTGAACAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRTPMVR*VLNNRR
Trigger: CCTCCTGTTGTTCAAGACTCACCTAACCATGGGAGT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGTGGAAGGTTGTTGCTaGTTCCTTAAAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAVEGCC*FLKVSV
Trigger: AACAGAAACTTTAAGGAATCAGCAACAACCTTCCAC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACAGTGGAAGGCCAGCTaGGGAAGAGAGTTTAGGGGC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKQWKAS*GREFRG
Trigger: GCCCCTAAACTCTCTTCCTCAGCTGGCCTTCCACTG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGTTCAAGGTTCACAATaGGGTCTTAACCAAGATATG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAVQGSQ*GLNQDM
Trigger: CATATCTTGGTTAAGACCTCATTGTGAACCTTGAAC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACACACCATGCACCATaGACTGTCATAGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATHHAP*TVIAFL
Trigger: TAAAAATGCTATGACAGTTCATGGTGCATGGTGTGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATATCAGTGGACTGCATaGCTGCAGACCACCCCCACC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKYQWTA*LQTTPT
Trigger: GGTGGGGGTGGTCTGCAGTCATGCAGTCCACTGATA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCATTTCCCCAACATTTaGGATACAACTTCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIHFPNI*DTTSGN
Trigger: GTTCCCCGAAGTTGTATCTCAAATGTTGGGGAAATG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACCATCTTCTCTGTCGTaGCCTGCATGTTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRPSSLS*PACSES
Trigger: AGACTCTGAACATGCAGGGCACGACAGAGAAGATGG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGCTTTCTAATGTCTTaGCTTGGGATAGTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGFLMS*LGIVLS
Trigger: GCTTAGGACTATCCCAAGGCAAGACATTAGAAAGCC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCCTTCTCAAGGGCACTaGTTTCATTCAAGGACTGAT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIPSQGH*FHSRTD
Trigger: ATCAGTCCTTGAATGAAAGCAGTGCCCTTGAGAAGG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGACCGCAGTGTGACATaGCTGAAGAAATACATATTA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLADRSVT*LKKYIL
Trigger: TAATATGTATTTCTTCAGGCATGTCACACTGCGGTC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGTGGACTGCATGACTaGAGACCACCCCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSGLHD*RPPPPR
Trigger: CCTTGGTGGGGGTGGTCTGCAGTCATGCAGTCCACT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATGTCCTGGAAAGCCTaGGGAGTGGTAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKMSWKA*GVVSPT
Trigger: GGTGGGGCTTACCACTCCCCAGGCTTTCCAGGACAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTCTTTAGCAAGTCTTaGATCAGTAGGAGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILFSKS*ISRSAE
Trigger: CTCAGCACTCCTACTGATCCAAGACTTGCTAAAGAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGTGACCTTGGATCCTaGAGCATTATGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRCDLGS*SIMPGE
Trigger: CTCACCTGGCATAATGCTCCAGGATCCAAGGTCACA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAATCTATTTAGCCTCTaGTCAGCTATAAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNINLFSL*SAISGG
Trigger: GCCCCCACTTATAGCTGACCAGAGGCTAAATAGATT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGGACTGGGTTTTTGTaGAAGGATGGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRWTGFL*KDGFSR
Trigger: CCTGGAGAAGCCATCCTTCCACAAAAACCCAGTCCA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACTCCCACGTTTGGACTaGGTTTTTGTGGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRLPRLD*VFVEGW
Trigger: CCATCCTTCCACAAAAACCCAGTCCAAACGTGGGAG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACCTTACCAGAACTCCTaGGAACGTCCGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKPYQNS*ERPPVG
Trigger: ACCCACAGGCGGACGTTCCCAGGAGTTCTGGTAAGG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGATGTTAACTTTTCTTaGGTCTGTATCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLADVNFS*VCILSR
Trigger: CCTGGAAAGGATACAGACCCAAGAAAAGTTAACATC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAATTAGCTGGGTGTGGTaGCAGGCGTCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRISWVW*QASVIP
Trigger: TGGAATTACAGACGCCTGCCACCACACCCAGCTAAT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTTTTCAGTATTGATTTaGCACTGCTTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAFSVLI*HCFLLP
Trigger: AGGAAGAAGGAAGCAGTGTCAAATCAATACTGAAAA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGAACTGTCTCAATTGTaGCCTTGGATCCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRELSQL*PWILEH
Trigger: ATGCTCCAGGATCCAAGGTCACAATTGAGACAGTTC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGGGGCAGAGGTAAATTaGTTGAAGACACTGGATCAG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRGAEVN*LKTLDQ
Trigger: CTGATCCAGTGTCTTCAATCAATTTACCTCTGCCCC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGTATTGGGCAGTCTGTaGAGCCTAGGATCAAAATTT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIVLGSL*SLGSKF
Trigger: AAATTTTGATCCTAGGCTTCACAGACTGCCCAATAC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTGGCCCCTCAAGAGTaGCTCCCACGTTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLAPQE*LPRLDW
Trigger: CCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAAACCATATGCTATGTaGGTGTTAGGTTCCCACGAA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIKPYAM*VLGSHE
Trigger: TTCGTGGGAACCTAACACTCACATAGCATATGGTTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATTCTCTGTCGTGCCCTaGATGTTCAGAGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRFSVVP*MFRVCH
Trigger: ATGACAGACTCTGAACATGCAGGGCACGACAGAGAA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGGAAGGCTGTGCACTaGTGGGACCTGAACCTTACC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKRKAVH*WDLNLT
Trigger: GGTAAGGTTCAGGTCCCAGCAGTGCACAGCCTTCCT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACCTGGCTGCCTTGCCTaGCTTGGATCACTGTACTGT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKPGCLA*LGSLYC
Trigger: ACAGTACAGTGATCCAAGGCAGGCAAGGCAGCCAGG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAACCCTATCAGTGGACTaGATGACTGCAGACCACCCC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKTLSVD*MTADHP
Trigger: GGGGTGGTCTGCAGTCATGCAGTCCACTGATAGGGT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATAGTGACTGGTAGCTaGCAAAACTTTCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIIVTGS*QNFLQT
Trigger: GGTTTGCAGAAAGTTTTGGCAGCTACCAGTCACTAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGGAGCCCTGGATCTATaGCAAACCCTTTCTGAATTC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRGALDL*QTLSEF
Trigger: GAATTCAGAAAGGGTTTGGCATAGATCCAGGGCTCC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACATACAAAGATGCCCTaGCTAGACTGTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRHTKMP*LDCGGQ
Trigger: TTGTCCTCCACAGTCTAGGCAGGGCATCTTTGTATG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATGTCCAGGGGAGCCTaGGTGCATCACAGGACTACT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKMSRGA*VHHRTT
Trigger: AGTAGTCCTGTGATGCACCCAGGCTCCCCTGGACAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATTGCTAGCTCTGATGTaGATGATGAACCGTGATCCC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRLLALM*MMNRDP
Trigger: GGGATCACGGTTCATCATCCACATCAGAGCTAGCAA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACTGCCTTGCCTGCCTTaGATCACTGTACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKLPCLP*ITVLWP
Trigger: AGGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGGCTTTGTCACAACTaGCAGATACTGCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGLCHN*QILLIN
Trigger: ATTTATCAGCAGTATCTGCCAGTTGTGACAAAGCCC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTTCCTAATGCAGTCATaGAATACTTCTGCCACACCT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIFLMQS*NTSATP
Trigger: AGGTGTGGCAGAAGTATTCCATGACTGCATTAGGAA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACACGTTCTTTTCGTTTaGTTTTCTTCGGCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRHVLFV*FSSASH
Trigger: GTGGCTTGCCGAAGAAAATCAAACGAAAAGAACGTG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGGTTAGGTGAGTCTTaGACAACAGGAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKWLGES*TTGGCC
Trigger: GCAGCAGCCTCCTGTTGTTCAAGACTCACCTAACCA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAGAATGCCAGCCGGGTaGGATCTTAAAGAGATTCTT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRRMPAG*DLKEIL
Trigger: AAGAATCTCTTTAAGATCTCACCCGGCTGGCATTCT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCACACACCATGCACCATaGACTGTCATAGCATTTTTA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNITHHAP*TVIAFL
Trigger: TAAAAATGCTATGACAGTTCATGGTGCATGGTGTGT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAAGAAGTATGGGGCCTaGCTATCTGCAGAGCTAATT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRKKYGA*LSAELI
Trigger: AATTAGCTCTGCAGATAGTCAGGCCCCATACTTCTT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACATTTCCCCAACATTTaGGATACAACTTCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRHFPNI*DTTSGN
Trigger: GTTCCCCGAAGTTGTATCTCAAATGTTGGGGAAATG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACTTGCTGGTGTCTTTTaGGCAGACAGATTAACAACG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRLAGVF*ADRLTT
Trigger: CGTTGTTAATCTGTCTGCTCAAAAGACACCAGCAAG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTATTTCTTCAAATCCTaGATCGTCTATTTCACCATC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAYFFKS*IVYFTI
Trigger: GATGGTGAAATAGACGATGCAGGATTTGAAGAAATA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCATTATGCATATAAATaGAGTTCTCTCCTTTGGTAC +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAHYAYK*SSLLWY
Trigger: GTACCAAAGGAGAGAACTGCATTTATATGCATAATG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAACAACAGGAGGCTGCTaGTGGGCAAATTCACCATGC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKTTGGC*WANSPC
Trigger: GCATGGTGAATTTGCCCAGCAGCAGCCTCCTGTTGT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACCCTATGAGGTTGGGTaGTGGTTTGTTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRPYEVG*WFVLHL
Trigger: AAGATGAAGAACAAACCAGCACCCAACCTCATAGGG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACCTTCTCAAGGGCACTaGTTTCATTCAAGGACTGAT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRPSQGH*FHSRTD
Trigger: ATCAGTCCTTGAATGAAAGCAGTGCCCTTGAGAAGG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTCCATTTCAACCCCCTaGTATATCCACTGTATTCAT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNISISTP*YIHCIH
Trigger: ATGAATACAGTGGATATAGCAGGGGGTTGAAATGGA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTCTCCTCACCAACATaGCGGCACCCGAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFFSSPT*RHPKQA
Trigger: CGCCTGTTTCGGGTGCCGCCATGTTGGTGAGGAGAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCATTGTTTCAGCTGATTaGCAAAATCTTCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAIVSAD*QNLPLF
Trigger: AAACAGAGGAAGATTTTGCCAATCAGCTGAAACAAT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGTATAAAATGCTGGTaGCTTCCTCCCAATTTTATG +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGIKCW*LPPNFM
Trigger: CATAAAATTGGGAGGAAGCCACCAGCATTTTATACC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGATATGTTGAGGGTGTaGACTGCTTCCCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRDMLRV*TASLKL
Trigger: CAATTTCAGGGAAGCAGTCCACACCCTCAACATATC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAACAGTGATTCTCTCTaGGTACTTTCATCACATGTC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNINSDSL*VLSSHV
Trigger: GACATGTGATGAAAGTACCCAGAGAGAATCACTGTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACCAGAGTTATTGGGTaGCTGAAAATTATGTATAGA +
Preference number: 4 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATRVIG*LKIMYR
Trigger: TCTATACATAATTTTCAGCCACCCAATAACTCTGGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTATGAGGTTGGGTGCTaGTTTGTTCTTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIYEVGC*FVLHLL
Trigger: AAGAAGATGAAGAACAAACCAGCACCCAACCTCATA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATCTAATGTCTTGCCTTaGGATAGTCCTAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRSNVLP*DSPKPR
Trigger: CCTAGGCTTAGGACTATCCCAAGGCAAGACATTAGA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAATCTATTTAGCCTCTaGTCAGCTATAAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRNLFSL*SAISGG
Trigger: GCCCCCACTTATAGCTGACCAGAGGCTAAATAGATT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTGTAAAAGTGACATTTaGATGGATGTCAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNICKSDI*MDVRKP
Trigger: TGGCTTCCTGACATCCATCCAAATGTCACTTTTACA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAACCCTTTCTGAATTCTaGGTGGATGGGGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKTLSEF*VDGAVG
Trigger: ACCCACTGCCCCATCCACCCAGAATTCAGAAAGGGT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGTATGTTCAACATCTaGATCAAGGCTGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRCMFNI*IKAVVR
Trigger: TCGGACTACAGCCTTGATTCAGATGTTGAACATACA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATTGTGGTCCTGGTGGTaGGGCACTGGTATAAAATGC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKLWSWW*GTGIKC
Trigger: GCATTTTATACCAGTGCCTCACCACCAGGACCACAA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGAGTTATTGGGTGGCTaGAAATTATGTATAGAATGC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIELLGG*KLCIEC
Trigger: GCATTCTATACATAATTTTCAGCCACCCAATAACTC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTTTTCAGTATTGATTTaGCACTGCTTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIFSVLI*HCFLLP
Trigger: AGGAAGAAGGAAGCAGTGTCAAATCAATACTGAAAA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGTGCCAGCATTTGCATaGTGCAAATCAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRVPAFA*CKSNFA
Trigger: AGCAAAGTTTGATTTGCATCATGCAAATGCTGGCAC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATTTGATCTGGGTAAGTaGGGGGCACCCTTTGATGCA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKFDLGK*GAPFDA
Trigger: TGCATCAAAGGGTGCCCCTCACTTACCCAGATCAAA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCCATCACAAACAGTATaGATAGCTAAGTTACATCTC +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIPSQTV*IAKLHL
Trigger: GAGATGTAACTTAGCTATTCATACTGTTTGTGATGG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACCAGTGCATGTCATCTaGAGCTTCGTAAAATTGCTA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRPVHVI*SFVKLL
Trigger: TAGCAATTTTACGAAGCTTCAGATGACATGCACTGG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAGAGAAGTCAGATCTTaGAGAGGCCCAAGTCTATAT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRREVRS*RGPSLY
Trigger: ATATAGACTTGGGCCTCTTCAAGATCTGACTTCTCT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTCCAAACTTTCACCATaGAGTAATCTTGTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNISKLSP*SNLVSL
Trigger: CAGACTTACAAGATTACTTCATGGTGAAAGTTTGGA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGGTCGGTGGATCATTTaGGGTCAGGAGTTCGAAATC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKGRWII*GQEFEI
Trigger: GATTTCGAACTCCTGACCTCAAATGATCCACCGACC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTGTCATCACTGTAGGTaGTGTACTCATCATATTCTT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNICHHCR*CTHHIL
Trigger: AAGAATATGATGAGTACAGCACCTACAGTGATGACA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGTTGAGGGTGTGGACTaGTTCCCTGAAATTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKVEGVD*FPEIVV
Trigger: GACCACAATTTCAGGGAAGCAGTCCACACCCTCAAC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATATCATCTTCTTCCTTaGTTGGTGCCCTATGAGGTT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRYHLLP*LVPYEV
Trigger: AACCTCATAGGGCACCAAGCAAGGAAGAAGATGATA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAATGCAAATCAAACTTTaGTCCACCAACAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRMQIKL*STNRRA
Trigger: GGCTCTTCTGTTGGTGGAGCAAAGTTTGATTTGCAT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATCAATTATTGAAGCTTaGGGGGTGGGGGACCCTATC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSIIEA*GVGDPI
Trigger: GATAGGGTCCCCCACCCCGCAAGCTTCAATAATTGA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGCAGTGATCCGAGATTaGACCATTACACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKAVIRD*TITLQP
Trigger: AGGCTGGAGTGTAATGGTGCAATCTCGGATCACTGC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGAGTCTGTCATGTTTaGTCAAGAACGGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFRVCHV*SRTGRG
Trigger: GCCCCGCCCCGTTCTTGACCAAACATGACAGACTCT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCCCTGGAGGTGGTTTaGGAAGAGGAGTTATGCCAC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPLEVV*EEELCH
Trigger: GTGGCATAACTCCTCTTCCCAAACCACCTCCAGGGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACTGGTGGTGAGGCACTaGTATAAAATGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKLVVRH*YKMLVA
Trigger: AGCCACCAGCATTTTATACCAGTGCCTCACCACCAG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCATGTCCAGGGGAGCCTaGGTGCATCACAGGACTACT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFMSRGA*VHHRTT
Trigger: AGTAGTCCTGTGATGCACCCAGGCTCCCCTGGACAT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGTGACCTTGGATCCTaGAGCATTATGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKCDLGS*SIMPGE
Trigger: CTCACCTGGCATAATGCTCCAGGATCCAAGGTCACA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAATAAGGAGATACATGTaGGTCCTGTCTCCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRIRRYM*VLSPKA
Trigger: TGCTTTTGGAGACAGGACCCACATGTATCTCCTTAT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATTAGCTGGGTGTGGTaGCAGGCGTCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKISWVW*QASVIP
Trigger: TGGAATTACAGACGCCTGCCACCACACCCAGCTAAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGGGCCCTGGAGCCCTaGATCTATGCCAAACCCTTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFWALEP*IYAKPF
Trigger: AAAGGGTTTGGCATAGATCCAGGGCTCCAGGGCCCA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAATAACAAAATGACCTaGGCCCTGGAGCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKNNKMT*ALEPWI
Trigger: GATCCAGGGCTCCAGGGCCCAGGTCATTTTGTTATT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGCCCTGCCTAGACTGTaGAGGACAAAAGCCCTAGAC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFALPRL*RTKALD
Trigger: GTCTAGGGCTTTTGTCCTCCACAGTCTAGGCAGGGC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAAAGTCATCCGATACTaGAAACACATTAGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRKVIRY*KHIRPF
Trigger: AAAGGGCCTAATGTGTTTTCAGTATCGGATGACTTT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGGACTACTGTGTCCCTaGGACATGTTAGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFGLLCP*DMLGPG
Trigger: TCCTGGACCTAACATGTCTCAGGGACACAGTAGTCC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGGGGCAGAGGTAAATTaGTTGAAGACACTGGATCAG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKGAEVN*LKTLDQ
Trigger: CTGATCCAGTGTCTTCAATCAATTTACCTCTGCCCC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGTGGATGATGAACCGTaGTCCCTAGGGTCATACAAA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKVDDEP*SLGSYK
Trigger: TTTGTATGACCCTAGGGATCACGGTTCATCATCCAC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGGTGGCTCTTATATTaGATGAGCTGGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKWWLLY*MSWPLC
Trigger: GCAAAGTGGCCAGCTCATTCAATATAAGAGCCACCA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTAGATGGGGAATTATaGTTATGTTTCTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILDGEL*LCFSRF
Trigger: AAAACGTGAGAAACATAAGCATAATTCCCCATCTAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGGCACTGGTATAAAATaGTGGTGGCTTCCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKGTGIK*WWLPPN
Trigger: ATTGGGAGGAAGCCACCAGCATTTTATACCAGTGCC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATCCACGCTGAGTAAATaGAATGTCATAATCCCTGTA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRSTLSK*NVIIPV
Trigger: TACAGGGATTATGACATTCCATTTACTCAGCGTGGA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATTGTTTCAGCTGATTaGCAAAATCTTCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIIVSAD*QNLPLF
Trigger: AAACAGAGGAAGATTTTGCCAATCAGCTGAAACAAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAACTGGTATAAAATGCTaGTGGCTTCCTCCCAATTTT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRTGIKC*WLPPNF
Trigger: AAAATTGGGAGGAAGCCACCAGCATTTTATACCAGT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAACAGTGATTCTCTCTaGGTACTTTCATCACATGTC +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRNSDSL*VLSSHV
Trigger: GACATGTGATGAAAGTACCCAGAGAGAATCACTGTT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATCTTCTTCCTTGCTTaGTGCCCTATGAGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIFFLA*CPMRLG
Trigger: ACCCAACCTCATAGGGCACCAAGCAAGGAAGAAGAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAAGTCTAAGATCCAGTaGGGCAGACTCAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKKSKIQ*GRLRRL
Trigger: AAGCCTTCTGAGTCTGCCCCACTGGATCTTAGACTT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAACCAGGGTTTGATCTaGGTAAGTGAGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFNQGLI*VSEGHP
Trigger: AGGGTGCCCCTCACTTACCCAGATCAAACCCTGGTT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATTGCTAGCTCTGATGTaGATGATGAACCGTGATCCC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKLLALM*MMNRDP
Trigger: GGGATCACGGTTCATCATCCACATCAGAGCTAGCAA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATTATGAAAGACAACTaGCATATATTCAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIIMKDN*HIFRQS
Trigger: ACTCTGCCTGAATATATGCCAGTTGTCTTTCATAAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGATGTTAACTTTTCTTaGGTCTGTATCCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRDVNFS*VCILSR
Trigger: CCTGGAAAGGATACAGACCCAAGAAAAGTTAACATC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATGAGCCAAGAAGTATaGGGCCTGACTATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKMSQEV*GLTICR
Trigger: TCTGCAGATAGTCAGGCCCCATACTTCTTGGCTCAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATACGAAAAATTAGCTaGGTGTGGTGGCAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIRKIS*VWWQAS
Trigger: AGACGCCTGCCACCACACCCAGCTAATTTTTCGTAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCACCCTTTCTGAATTCTaGGTGGATGGGGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFTLSEF*VDGAVG
Trigger: ACCCACTGCCCCATCCACCCAGAATTCAGAAAGGGT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGTATACCCCCTTGCTaGTGTCTTTTGAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSIPPC*CLLSRQ
Trigger: CTGTCTGCTCAAAAGACACCAGCAAGGGGGTATACT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTGTGGTCCTGGTGGTaGGGCACTGGTATAAAATGC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLWSWW*GTGIKC
Trigger: GCATTTTATACCAGTGCCTCACCACCAGGACCACAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCACTCCCATGGTTAGGTaGGTCTTGAACAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFTPMVR*VLNNRR
Trigger: CCTCCTGTTGTTCAAGACTCACCTAACCATGGGAGT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAATACCACTAAGAACTaGAGTGGAAGTTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKNTTKN*SGSSQW
Trigger: CCACTGGGAACTTCCACTTCAGTTCTTAGTGGTATT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATTCAGCAGAGTAGCTaGGCTAAAAGTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIQQSS*AKSSHR
Trigger: CCTGTGTGAACTTTTAGCTCAGCTACTCTGCTGAAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACTTGCTGGTGTCTTTTaGGCAGACAGATTAACAACG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKLAGVF*ADRLTT
Trigger: CGTTGTTAATCTGTCTGCTCAAAAGACACCAGCAAG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTCTTCCTTGCTTGGTaGCCTATGAGGTTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFFFLAW*PMRLGA
Trigger: AGCACCCAACCTCATAGGGCACCAAGCAAGGAAGAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGATCCTGGAGCATTATaGCAGGTGAGGCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFDPGAL*QVRHPK
Trigger: CTTTGGATGCCTCACCTGGCATAATGCTCCAGGATC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCCTCTGTTACAGAATaGCAGCCGGGTGAGATCTTA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPSVTE*QPGEIL
Trigger: TAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGTCATGGAATACTTCTaGCACACCTGTTTAACGGGT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKVMEYF*HTCLTG
Trigger: ACCCGTTAAACAGGTGTGGCAGAAGTATTCCATGAC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACAAAGTATACCCCCTTaGTGGTGTCTTTTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKQSIPP*WCLLSR
Trigger: TCTGCTCAAAAGACACCAGCAAGGGGGTATACTTTG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTGGTGGTGAGGCACTaGTATAAAATGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLVVRH*YKMLVA
Trigger: AGCCACCAGCATTTTATACCAGTGCCTCACCACCAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGATATGTTGAGGGTGTaGACTGCTTCCCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKDMLRV*TASLKL
Trigger: CAATTTCAGGGAAGCAGTCCACACCCTCAACATATC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCCACCCATACTTGGTaGTGTCAAAGATGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPTHTW*CQRCVW
Trigger: CCAGACACATCTTTGACACCACCAAGTATGGGTGGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGCCCCACCCATACTTaGTGGTGTCAAAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSPTHT*WCQRCV
Trigger: GACACATCTTTGACACCACCAAGTATGGGTGGGGCT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATCACCAGGACTTTGCTaGTATGATGAACCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSPGLC*YDEPGE
Trigger: TTCTCCAGGTTCATCATACCAGCAAAGTCCTGGTGA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACATCACCAGAGTTATTaGGTGGCTGAAAATTATGTA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRHHQSY*VAENYV
Trigger: TACATAATTTTCAGCCACCCAATAACTCTGGTGATG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGGACTGGGTTTTTGTaGAAGGATGGCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFWTGFL*KDGFSR
Trigger: CCTGGAGAAGCCATCCTTCCACAAAAACCCAGTCCA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAGAAGAGGTATTCATTaGGGGAAAATGGCTACTTAT +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRRRGIH*GKMATY
Trigger: ATAAGTAGCCATTTTCCCCCAATGAATACCTCTTCT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGTCTTCACATTGCTTaGGCTGAGGGTGGGGACAAA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFCLHIA*AEGGDK
Trigger: TTTGTCCCCACCCTCAGCCCAAGCAATGTGAAGACA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGTATGTTCAACATCTaGATCAAGGCTGTAGTCCGA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKCMFNI*IKAVVR
Trigger: TCGGACTACAGCCTTGATTCAGATGTTGAACATACA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGTTATGTAGCTTCCTaGTATATGTCCACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKCYVAS*YMSTLS
Trigger: ACTCAGCGTGGACATATATCAGGAAGCTACATAACA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGAACCTGGAGAACAGTaGTTCTCTCTGGGTACTTTC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFEPGEQ*FSLGTF
Trigger: GAAAGTACCCAGAGAGAATCACTGTTCTCCAGGTTC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGAACTGTCTCAATTGTaGCCTTGGATCCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFELSQL*PWILEH
Trigger: ATGCTCCAGGATCCAAGGTCACAATTGAGACAGTTC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAAACCATATGCTATGTaGGTGTTAGGTTCCCACGAA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKKPYAM*VLGSHE
Trigger: TTCGTGGGAACCTAACACTCACATAGCATATGGTTT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGGTGGCTCTTATATTaGATGAGCTGGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFWWLLY*MSWPLC
Trigger: GCAAAGTGGCCAGCTCATTCAATATAAGAGCCACCA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTCTCTGTCGTGCCCTaGATGTTCAGAGTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFFSVVP*MFRVCH
Trigger: ATGACAGACTCTGAACATGCAGGGCACGACAGAGAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATGCAAATCAAACTTTaGTCCACCAACAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKMQIKL*STNRRA
Trigger: GGCTCTTCTGTTGGTGGAGCAAAGTTTGATTTGCAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTGTTGTGTCACCAGTaGATGTCATCTGAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLLCHQ*MSSEAS
Trigger: CGAAGCTTCAGATGACATGCACTGGTGACACAACAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATAGTGACTGGTAGCTaGCAAAACTTTCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIVTGS*QNFLQT
Trigger: GGTTTGCAGAAAGTTTTGGCAGCTACCAGTCACTAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTTCATCACATGTCCTaGAAAGCCTGGGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFFHHMS*KAWGVV
Trigger: TACCACTCCCCAGGCTTTCCAGGACATGTGATGAAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATCGTAAAACTCAGCTaGGTTTTGCAGGGACTCATA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIVKLS*VLQGLI
Trigger: TATGAGTCCCTGCAAAACCCAGCTGAGTTTTACGAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAACCAGAGTTATTGGGTaGCTGAAAATTATGTATAGA +
Preference number: 4 (lower is better)
Translates to: HQVIPSVTECQPGEILKRTRVIG*LKIMYR
Trigger: TCTATACATAATTTTCAGCCACCCAATAACTCTGGT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAAGTCTAAGATCCAGTaGGGCAGACTCAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFKSKIQ*GRLRRL
Trigger: AAGCCTTCTGAGTCTGCCCCACTGGATCTTAGACTT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGTGACTCCCACGTTTaGACTGGGTTTTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSDSHV*TGFLWK
Trigger: CTTCCACAAAAACCCAGTCCAAACGTGGGAGTCACT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGGGCTTTGTCACAACTaGCAGATACTGCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKGLCHN*QILLIN
Trigger: ATTTATCAGCAGTATCTGCCAGTTGTGACAAAGCCC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATAAGGAGATACATGTaGGTCCTGTCTCCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIRRYM*VLSPKA
Trigger: TGCTTTTGGAGACAGGACCCACATGTATCTCCTTAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATTCCTAATGCAGTCATaGAATACTTCTGCCACACCT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKFLMQS*NTSATP
Trigger: AGGTGTGGCAGAAGTATTCCATGACTGCATTAGGAA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTCAGGAAGCTAAGGTaGGAGAATTGCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLRKLR*ENCLNL
Trigger: CAGGTTCAAGCAATTCTCCCACCTTAGCTTCCTGAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCATACGAAAAATTAGCTaGGTGTGGTGGCAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFIRKIS*VWWQAS
Trigger: AGACGCCTGCCACCACACCCAGCTAATTTTTCGTAT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGTTCAATACCTTGCTaGACTCCTTTCATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKCSIPC*TPFILC
Trigger: ACAGAGAATGAAAGGAGTTCAGCAAGGTATTGAACA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCACTCATAATTGGTGTTaGGCTGCATTTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFTHNWC*AAFHQD
Trigger: GTCCTGGTGAAATGCAGCTCAACACCAATTATGAGT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGTTCAAGGTTCACAATaGGGTCTTAACCAAGATATG +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKVQGSQ*GLNQDM
Trigger: CATATCTTGGTTAAGACCTCATTGTGAACCTTGAAC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCATTCAGCAGAGTAGCTaGGCTAAAAGTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFIQQSS*AKSSHR
Trigger: CCTGTGTGAACTTTTAGCTCAGCTACTCTGCTGAAT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCCTATGAGGTTGGGTaGTGGTTTGTTCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPYEVG*WFVLHL
Trigger: AAGATGAAGAACAAACCAGCACCCAACCTCATAGGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTAGGCTCTTTCGGTTaGAGCCTAATTTGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLGSFG*SLIWGF
Trigger: AAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGTCAAAGATGTGTCTaGTTGAACAAGCACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFCQRCV*LNKHSS
Trigger: GCTGGAGTGCTTGTTCAACCAGACACATCTTTGACA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCACCAGGACTTTGCTaGTATGATGAACCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSPGLC*YDEPGE
Trigger: TTCTCCAGGTTCATCATACCAGCAAAGTCCTGGTGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCTAATGTCTTGCCTTaGGATAGTCCTAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSNVLP*DSPKPR
Trigger: CCTAGGCTTAGGACTATCCCAAGGCAAGACATTAGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGTGCCAGCATTTGCATaGTGCAAATCAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFVPAFA*CKSNFA
Trigger: AGCAAAGTTTGATTTGCATCATGCAAATGCTGGCAC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGTATTGGGCAGTCTGTaGAGCCTAGGATCAAAATTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFVLGSL*SLGSKF
Trigger: AAATTTTGATCCTAGGCTTCACAGACTGCCCAATAC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCTAATTTGGGGGTTTaGAACATTCAGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPNLGV*NIQLGN
Trigger: ATTTCCCAGCTGAATGTTTCAAACCCCCAAATTAGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGAGAAGTCAGATCTTaGAGAGGCCCAAGTCTATAT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFREVRS*RGPSLY
Trigger: ATATAGACTTGGGCCTCTTCAAGATCTGACTTCTCT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCTATGTCATGCAAATaGAGAGATTCTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSMSCK*RDSDSL
Trigger: GAGGCTGTCAGAATCTCTTCATTTGCATGACATAGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGTCATCACTGTAGGTaGTGTACTCATCATATTCTT +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKCHHCR*CTHHIL
Trigger: AAGAATATGATGAGTACAGCACCTACAGTGATGACA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCATTTCACCAGGACTTTaGTGGTATGATGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFISPGL*WYDEPG
Trigger: TCCAGGTTCATCATACCAGCAAAGTCCTGGTGAAAT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTGTATTGTTTCAGCTaGTTGGCAAAATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLYCFS*LAKSSS
Trigger: AGAGGAAGATTTTGCCAATCAGCTGAAACAATACAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGTTCAATACCTTGCTaGACTCCTTTCATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFCSIPC*TPFILC
Trigger: ACAGAGAATGAAAGGAGTTCAGCAAGGTATTGAACA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCAGAGAAATCTGTCTaGAAATCGTCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSEKSV*KSSSGS
Trigger: TGATCCTGAAGACGATTTTCAGACAGATTTCTCTGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGTGGAAGGTTGTTGCTaGTTCCTTAAAGTTTCTGTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFVEGCC*FLKVSV
Trigger: AACAGAAACTTTAAGGAATCAGCAACAACCTTCCAC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCACTCACAATCTTCTTTaGACTCACAGCTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFTHNLL*THSSSL
Trigger: TAAGGAAGAGCTGTGAGTTCAAAGAAGATTGTGAGT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATATTTCTTCAAATCCTaGATCGTCTATTTCACCATC +
Preference number: 4 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKYFFKS*IVYFTI
Trigger: GATGGTGAAATAGACGATGCAGGATTTGAAGAAATA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCATGGAGCTCCTAAGTTaGCATAATCTGTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFMELLS*HNLSSH
Trigger: ATGTGAAGACAGATTATGGCAACTTAGGAGCTCCAT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCCACGCTGAGTAAATaGAATGTCATAATCCCTGTA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSTLSK*NVIIPV
Trigger: TACAGGGATTATGACATTCCATTTACTCAGCGTGGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGGTATAAAATGCTGGTaGCTTCCTCCCAATTTTATG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFGIKCW*LPPNFM
Trigger: CATAAAATTGGGAGGAAGCCACCAGCATTTTATACC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCACTGGTATAAAATGCTaGTGGCTTCCTCCCAATTTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFTGIKC*WLPPNF
Trigger: AAAATTGGGAGGAAGCCACCAGCATTTTATACCAGT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTATGAGGTTGGGTGCTaGTTTGTTCTTCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFYEVGC*FVLHLL
Trigger: AAGAAGATGAAGAACAAACCAGCACCCAACCTCATA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGTAAAAGTGACATTTaGATGGATGTCAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFCKSDI*MDVRKP
Trigger: TGGCTTCCTGACATCCATCCAAATGTCACTTTTACA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR CAA 72 bp TCAGTTCAGCAAAGTATACCCCCTTGCTGGTGTCTTTaGAGCAGACAGATTAACAACGTCATTAATCTACTA +
Preference number: 4 (lower is better)
Translates to: SVQQSIPPCWCL*SRQINNVINLL
Trigger: TAGTAGATTAATGACGTTGTTAATCTGTCTGCTCAAAAGACACCAGCAAGGGGGTATACTTTGCTGAACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCCAAACTTTCACCATaGAGTAATCTTGTAAGTCTG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSKLSP*SNLVSL
Trigger: CAGACTTACAAGATTACTTCATGGTGAAAGTTTGGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR TCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCACAACTTCGGGGAACTaGAATAATTACAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFTTSGN*NNYSRK
Trigger: CTTTCTACTGTAATTATTTCAGTTCCCCGAAGTTGT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCCCTGGTAACATTTTaGTCCACTATGATAGAACTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSLVTF*STMIEL
Trigger: AAGTTCTATCATAGTGGAGCAAAATGTTACCAGGGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCATCACCAGAGTTATTaGGTGGCTGAAAATTATGTA +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFHHQSY*VAENYV
Trigger: TACATAATTTTCAGCCACCCAATAACTCTGGTGATG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTTGAAACATTCAGCTaGGAAATAGAGGGTCCATAT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFFETFS*EIEGPY
Trigger: ATATGGACCCTCTATTTCCCAGCTGAATGTTTCAAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTAGATGGGGAATTATaGTTATGTTTCTCACGTTTT +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLDGEL*LCFSRF
Trigger: AAAACGTGAGAAACATAAGCATAATTCCCCATCTAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR GCA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCATTATGCATATAAATaGAGTTCTCTCCTTTGGTAC +
Preference number: 4 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFHYAYK*SSLLWY
Trigger: GTACCAAAGGAGAGAACTGCATTTATATGCATAATG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
3UTR CAA 72 bp TATTTTTCTATCATATGTGACTTCCCTCTCAAACATTaGAGGGCAAATTTCTGTAAAATACAGGTGGACTCA +
Preference number: 4 (lower is better)
Translates to: YFSIICDFPLKH*RANFCKIQVDS
Trigger: TGAGTCCACCTGTATTTTACAGAAATTTGCCCTCAAATGTTTGAGAGGGAAGTCACATATGATAGAAAAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp CCCCGCGCTGCCGGCGCTGCCGCTCTAGTCTCTATTCGCCGCCGGTaGCTGTGGCGTGGGAGCGGGCGGGCGGCGTGCAGCGACGCGGGG +
Preference number: 5 (lower is better)
Translates to: PRAAGAAALVSIRRR*LWRGSGRAACSDAG
Trigger: CCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCCACGCCACAGCCACCGGCGGCGAATAGAGACTAGAGCGGCAGCGCCGGCAGCGCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp GCTGCCGGCGCTGCCGCTCTAGTCTCTATTCGCCGCCGGTGGCTGTaGCGTGGGAGCGGGCGGGCGGCGTGCAGCGACGCGGGGATTTGG +
Preference number: 5 (lower is better)
Translates to: AAGAAALVSIRRRWL*RGSGRAACSDAGIW
Trigger: CCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCCACGCCACAGCCACCGGCGGCGAATAGAGACTAGAGCGGCAGCGCCGGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp GGCTCTAACTGCAAACACTGGGCAACGGCCCCGCGCTGCCGGCGCTaGCGCTCTAGTCTCTATTCGCCGCCGGTGGCTGTGGCGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GSNCKHWATAPRCRR*RSSLYSPPVAVAWE
Trigger: CTCCCACGCCACAGCCACCGGCGGCGAATAGAGACTAGAGCGGCAGCGCCGGCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp TCTATTCGCCGCCGGTGGCTGTGGCGTGGGAGCGGGCGGGCGGCGTaGAGCGACGCGGGGATTTGGACAGTGGCCGTAACGGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: SIRRRWLWRGSGRAA*SDAGIWTVAVTVIS
Trigger: AGAAATCACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCCACGCCACAGCCACCGGCGGCGAATAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp CTGTGGCGTGGGAGCGGGCGGGCGGCGTGCAGCGACGCGGGGATTTaGACAGTGGCCGTAACGGTGATTTCTCCTCACCAACATGGCGGC +
Preference number: 5 (lower is better)
Translates to: LWRGSGRAACSDAGI*TVAVTVISPHQHGG
Trigger: GCCGCCATGTTGGTGAGGAGAAATCACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCCACGCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp GAGAGATGGGGCTCTAACTGCAAACACTGGGCAACGGCCCCGCGCTaGCGGCGCTGCCGCTCTAGTCTCTATTCGCCGCCGGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ERWGSNCKHWATAPR*RRCRSSLYSPPVAV
Trigger: CACAGCCACCGGCGGCGAATAGAGACTAGAGCGGCAGCGCCGGCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGAGCCCCATCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 90 bp CCCCGCGCCGCCTGCGGGAACCTGCTCCCGGCCGCCGCCGACAGGTaGCGAAGTGGTAAAAACTCACGGTTACTAGTGAGCGACACAGAC +
Preference number: 5 (lower is better)
Translates to: PRAACGNLLPAAADR*RSGKNSRLLVSDTD
Trigger: GTCTGTGTCGCTCACTAGTAACCGTGAGTTTTTACCACTTCGTCACCTGTCGGCGGCGGCCGGGAGCAGGTTCCCGCAGGCGGCGCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp CTTTCCAGTCTATTAACAACCACGCCAGAGAGATGGGGCTCTAACTaGAAACACTGGGCAACGGCCCCGCGCTGCCGGCGCTGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: LSSLLTTTPERWGSN*KHWATAPRCRRCRS
Trigger: AGAGCGGCAGCGCCGGCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGAGCCCCATCTCTCTGGCGTGGTTGTTAATAGACTGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp TGCTGGGACCTGAACCTTACCAGAACTCCTGGGAACGTCCGCCTGTaGGTCAGCTGGCCCCTCAAGAGTGACTCCCACGTTTGGACTGGG +
Preference number: 5 (lower is better)
Translates to: CWDLNLTRTPGNVRL*VSWPLKSDSHVWTG
Trigger: CCCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCCAGGAGTTCTGGTAAGGTTCAGGTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp CTATTAACAACCACGCCAGAGAGATGGGGCTCTAACTGCAAACACTaGGCAACGGCCCCGCGCTGCCGGCGCTGCCGCTCTAGTCTCTAT +
Preference number: 5 (lower is better)
Translates to: LLTTTPERWGSNCKH*ATAPRCRRCRSSLY
Trigger: ATAGAGACTAGAGCGGCAGCGCCGGCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGAGCCCCATCTCTCTGGCGTGGTTGTTAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCAGCGACGCGGGGATTaGGACAGTGGCCGTAACGGT +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAQRRGD*DSGRNG
Trigger: ACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGCCCCGGAACCAGAATaGCTAGTTCCTGCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAAPEPE*LVPAPE
Trigger: CTCAGGGGCAGGAACTAGCAATTCTGGTTCCGGGGC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGCTGCCTTGCCTGCCTaGGATCACTGTACTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAAALPA*DHCTVA
Trigger: GGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAGC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCTGTCCTGGCTGCCTaGCCTGCCTTGGATCACTGT +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPVLAA*PALDHC
Trigger: ACAGTGATCCAAGGCAGGCAAGGCAGCCAGGACAGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 90 bp AACTCCTGGGAACGTCCGCCTGTGGGTCAGCTGGCCCCTCAAGAGTaGCTCCCACGTTTGGACTGGGTTTTTGTGGAAGGATGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: NSWERPPVGQLAPQE*LPRLDWVFVEGWLL
Trigger: GAGAAGCCATCCTTCCACAAAAACCCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCCAGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343936.4
ENST00000409871.6
ENST00000502881.2
CDS CCA 90 bp GTCCGCCTGTGGGTCAGCTGGCCCCTCAAGAGTGACTCCCACGTTTaGACTGGGTTTTTGTGGAAGGATGGCTTCTCCAGGAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: VRLWVSWPLKSDSHV*TGFLWKDGFSRRRF
Trigger: GAACCTTCTCCTGGAGAAGCCATCCTTCCACAAAAACCCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343936.4
ENST00000409871.6
ENST00000502881.2
CDS CCA 90 bp CTGAACCTTACCAGAACTCCTGGGAACGTCCGCCTGTGGGTCAGCTaGCCCCTCAAGAGTGACTCCCACGTTTGGACTGGGTTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: LNLTRTPGNVRLWVS*PLKSDSHVWTGFLW
Trigger: CCACAAAAACCCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCCAGGAGTTCTGGTAAGGTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp TCTCTACCGGGATCATTATCTGGGGTCGGGCTCCCCTGTCCTGGCTaGCTTGCCTGCCTTGGATCACTGTACTGTGGCCTAATTAAGCCT +
Preference number: 5 (lower is better)
Translates to: SLPGSLSGVGLPCPG*LACLGSLYCGLIKP
Trigger: AGGCTTAATTAGGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAGCCAGGACAGGGGAGCCCGACCCCAGATAATGATCCCGGTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp TTAGCACAGAACAGAACTCCTGGGAACGTCCGCCTGTGGGTCAGCTaGCCCCTCAAGAGTGACTCCCACGTTTGGACTGGGTTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: LAQNRTPGNVRLWVS*PLKSDSHVWTGFLW
Trigger: CCACAAAAACCCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCCAGGAGTTCTGTTCTGTGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502881.2
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACCCCTGGAGGTGGTTaGGGAAGAGGAGTTATGCCA +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATPGGG*GRGVMP
Trigger: TGGCATAACTCCTCTTCCCAAACCACCTCCAGGGGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp GGATCATTATCTGGGGTCGGGCTCCCCTGTCCTGGCTGCCTTGCCTaGCTTGGATCACTGTACTGTGGCCTAATTAAGCCTGTTAATGCC +
Preference number: 5 (lower is better)
Translates to: GSLSGVGLPCPGCLA*LGSLYCGLIKPVNA
Trigger: GGCATTAACAGGCTTAATTAGGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAGCCAGGACAGGGGAGCCCGACCCCAGATAATGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp AGTAAGTCTTACAAAAAGAGCTCTTTGCACTGCAGGGAGGAGGCCTaGTACAGGCAGAGGGCCATGGCCTGTCCTAGTGCTGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: SKSYKKSSLHCREEA*YRQRAMACPSAAAI
Trigger: GATGGCAGCAGCACTAGGACAGGCCATGGCCCTCTGCCTGTACCAGGCCTCCTCCCTGCAGTGCAAAGAGCTCTTTTTGTAAGACTTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCTGGTGCCCTATGAGGTaGGGTGCTGGTTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAWCPMR*GAGLFF
Trigger: GAAGAACAAACCAGCACCCAACCTCATAGGGCACCA...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCATCTTCTTCCTTGCTaGGTGCCCTATGAGGTTGGG +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAHLLPC*VPYEVG
Trigger: CCCAACCTCATAGGGCACCAAGCAAGGAAGAAGATG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGTGATGAACCAGGGTTaGATCTGGGTAAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAVMNQG*IWVSEG
Trigger: CCCCTCACTTACCCAGATCAAACCCTGGTTCATCAC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp CTCTTTCAGAGATTTGTCATCTGTTTCTCTACCGGGATCATTATCTaGGGTCGGGCTCCCCTGTCCTGGCTGCCTTGCCTGCCTTGGATC +
Preference number: 5 (lower is better)
Translates to: LFQRFVICFSTGIII*GRAPLSWLPCLPWI
Trigger: GATCCAAGGCAGGCAAGGCAGCCAGGACAGGGGAGCCCGACCCCAGATAATGATCCCGGTAGAGAAACAGATGACAAATCTCTGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGTGAGGGGCACCCTTaGATGCATGTGAATCCTTCA +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLASEGHP*MHVNPS
Trigger: TGAAGGATTCACATGCATCAAAGGGTGCCCCTCACT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTCCTGAAGAAGCTGTaGCTAGCTCTGATGTGGATG +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALLKKL*LALMWM
Trigger: CATCCACATCAGAGCTAGCAACAGCTTCTTCAGGAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGTTTGGACTGGGTTTTaGTGGAAGGATGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAVWTGF*WKDGFS
Trigger: GGAGAAGCCATCCTTCCACAAAAACCCAGTCCAAAC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACCTGTCCTGGCTGCCTaGCCTGCCTTGGATCACTGT +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRPVLAA*PALDHC
Trigger: ACAGTGATCCAAGGCAGGCAAGGCAGCCAGGACAGG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTTGAGGTAAGGAGTTaGAGACCAGCCGGGCCAACA +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILEVRS*RPAGPT
Trigger: TGTTGGCCCGGCTGGTCTCAAACTCCTTACCTCAAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGTAAGGCCAGCACTTaGGGAGGCTCAGGTCGGTGG +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRCKAST*GGSGRW
Trigger: CCACCGACCTGAGCCTCCCAAAGTGCTGGCCTTACA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCACATTAGGCCCTTTATaGGTTCTTCCCCCACGTTCT +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLATLGPL*VLPPRS
Trigger: AGAACGTGGGGGAAGAACCAATAAAGGGCCTAATGT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCAAAGATGTGTCTGGTaGAACAAGCACTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAQRCVW*NKHSSL
Trigger: CAAGCTGGAGTGCTTGTTCAACCAGACACATCTTTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTACAAAAAGAGCTCTTaGCACTGCAGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIYKKSS*HCREEA
Trigger: GGCCTCCTCCCTGCAGTGCAAAGAGCTCTTTTTGTA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAGGCAGGAGAATTGCTaGAACCCAGAGGCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIRQENC*NPEAEV
Trigger: AACCTCTGCCTCTGGGTTCAAGCAATTCTCCTGCCT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp TTCTTGGTATCTCTGAGTAAGTCTTACAAAAAGAGCTCTTTGCACTaGAGGGAGGAGGCCTGGTACAGGCAGAGGGCCATGGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: FLVSLSKSYKKSSLH*REEAWYRQRAMACP
Trigger: AGGACAGGCCATGGCCCTCTGCCTGTACCAGGCCTCCTCCCTGCAGTGCAAAGAGCTCTTTTTGTAAGACTTACTCAGAGATACCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp ACCTGGAGAACAGTGATTCTCTCTGGGTACTTTCATCACATGTCCTaGAAAGCCTGGGGAGTGGTAAGCCCCACCCATACTTGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: TWRTVILSGYFHHMS*KAWGVVSPTHTWWC
Trigger: ACACCACCAAGTATGGGTGGGGCTTACCACTCCCCAGGCTTTCCAGGACATGTGATGAAAGTACCCAGAGAGAATCACTGTTCTCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACAGCGACGCGGGGATTaGGACAGTGGCCGTAACGGT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKQRRGD*DSGRNG
Trigger: ACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCTG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGAACTATAGATATGTaGAGGGTGTGGACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARTIDM*RVWTAS
Trigger: GGAAGCAGTCCACACCCTCAACATATCTATAGTTCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGGTTGGGTGCTGGTTaGTTCTTCATCTTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARLGAG*FFIFLV
Trigger: TACCAAGAAGATGAAGAACAAACCAGCACCCAACCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAGGCTTTCTAATGTCTaGCCTTGGGATAGTCCTAAG +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLARLSNV*PWDSPK
Trigger: CTTAGGACTATCCCAAGGCAAGACATTAGAAAGCCT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGATGCAAATCAAACTTaGCTCCACCAACAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLADANQT*LHQQKS
Trigger: GCTCTTCTGTTGGTGGAGCAAAGTTTGATTTGCATC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCAGAGAAGTCAGATCTaGAAGAGGCCCAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAQRSQI*KRPKSI
Trigger: TATAGACTTGGGCCTCTTCAAGATCTGACTTCTCTG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGTAACCCCAACACTTTaGGAGGTTGAGGCGGGTGGA +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRVTPTL*EVEAGG
Trigger: TCCACCCGCCTCAACCTCCAAAAGTGTTGGGGTTAC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGAGTTCAAGATCAGCTaGGCCAACATGGTCAAACCC +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIEFKIS*ANMVKP
Trigger: GGGTTTGACCATGTTGGCCAAGCTGATCTTGAACTC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCCTTGCTGGTGTCTTTaGAGCAGACAGATTAACAAC +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAPCWCL*SRQINN
Trigger: GTTGTTAATCTGTCTGCTCAAAAGACACCAGCAAGG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGCAAAGTATACCCCCTaGCTGGTGTCTTTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIAKYTP*LVSFEQ
Trigger: CTGCTCAAAAGACACCAGCAAGGGGGTATACTTTGC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCCTCCCTGGTAACATTTaGCTCCACTATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLALPGNI*LHYDRT
Trigger: AGTTCTATCATAGTGGAGCAAAATGTTACCAGGGAG...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAATGCTCTGGAGGGGTaGGCAGAAGCCCAACCCCTG +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKNALEG*AEAQPL
Trigger: CAGGGGTTGGGCTTCTGCCAACCCCTCCAGAGCATT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATGGTGCCCTATGAGGTaGGGTGCTGGTTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRWCPMR*GAGLFF
Trigger: GAAGAACAAACCAGCACCCAACCTCATAGGGCACCA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCAATGAGCTGGCCACTTaGCCTAAACATGCTATGATT +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLANELAT*PKHAMI
Trigger: AATCATAGCATGTTTAGGCAAAGTGGCCAGCTCATT...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTGGTGGCTCTTATATaGAATGAGCTGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILVALI*NELATL
Trigger: CAAAGTGGCCAGCTCATTCAATATAAGAGCCACCAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATGTAAGGCCAGCACTTaGGGAGGCTCAGGTCGGTGG +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKCKAST*GGSGRW
Trigger: CCACCGACCTGAGCCTCCCAAAGTGCTGGCCTTACA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp ACAGTGATTCTCTCTGGGTACTTTCATCACATGTCCTGGAAAGCCTaGGGAGTGGTAAGCCCCACCCATACTTGGTGGTGTCAAAGATGT +
Preference number: 5 (lower is better)
Translates to: TVILSGYFHHMSWKA*GVVSPTHTWWCQRC
Trigger: ACATCTTTGACACCACCAAGTATGGGTGGGGCTTACCACTCCCCAGGCTTTCCAGGACATGTGATGAAAGTACCCAGAGAGAATCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACAGAGTCTGTCATGTTaGGTCAAGAACGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKQSLSC*VKNGAG
Trigger: CCCCGCCCCGTTCTTGACCAAACATGACAGACTCTG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCCACGTTCTTTTCGTTaGATTTTCTTCGGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIPRSFR*IFFGKP
Trigger: TGGCTTGCCGAAGAAAATCAAACGAAAAGAACGTGG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAAACTCAGCTGGGTTTaGCAGGGACTCATAATTGGT +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIKLSWV*QGLIIG
Trigger: ACCAATTATGAGTCCCTGCAAAACCCAGCTGAGTTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCCCACACGATGTGTTTaGCAAAGTTGGGTTTGGTTA +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIPTRCV*QSWVWL
Trigger: TAACCAAACCCAACTTTGCAAAACACATCGTGTGGG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATAATAGGGAGGGCTTaGTCACAACTGGCAGATACT +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIIIGRA*SQLADT
Trigger: AGTATCTGCCAGTTGTGACAAAGCCCTCCCTATTAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 90 bp ATGTTGAGGGTGTGGACTGCTTCCCTGAAATTGTGGTCCTGGTGGTaGGGCACTGGTATAAAATGCTGGTGGCTTCCTCCCAATTTTATG +
Preference number: 5 (lower is better)
Translates to: MLRVWTASLKLWSWW*GTGIKCWWLPPNFM
Trigger: CATAAAATTGGGAGGAAGCCACCAGCATTTTATACCAGTGCCTCACCACCAGGACCACAATTTCAGGGAAGCAGTCCACACCCTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp AGTCTAAGATCCAGTGGGGCAGACTCAGAAGGCTTTCTAATGTCTTaGCTTGGGATAGTCCTAAGCCTAGGGTCAACCACTTGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SLRSSGADSEGFLMS*LGIVLSLGSTTWFP
Trigger: AGGAAACCAAGTGGTTGACCCTAGGCTTAGGACTATCCCAAGGCAAGACATTAGAAAGCCTTCTGAGTCTGCCCCACTGGATCTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGTCCAGGACCTGGACTaGACCCAGAACTATAGATAT +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRVQDLD*TQNYRY
Trigger: ATATCTATAGTTCTGGGTCAAGTCCAGGTCCTGGAC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGTGTTAATTTTGGCTTaGGCTGCTAATTTTGGATCA +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAVLILA*AANFGS
Trigger: TGATCCAAAATTAGCAGCCAAAGCCAAAATTAACAC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCATCCTTCATAACCACTaGATGAGACTCTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIILHNH*MRLCIG
Trigger: CCCAATACAGAGTCTCATCAAGTGGTTATGAAGGAT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGCCCCGGAACCAGAATaGCTAGTTCCTGCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFAPEPE*LVPAPE
Trigger: CTCAGGGGCAGGAACTAGCAATTCTGGTTCCGGGGC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGCTGCCTTGCCTGCCTaGGATCACTGTACTGTGGCC +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFAALPA*DHCTVA
Trigger: GGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAGC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GGAAAACAAACAATCTTAAACCTGGACAACTCCCGCCTGCCCCCGTCCCTGGCCGAACTCTTAGGCCGTTaGGTTATATATGTCAAAACT +
Preference number: 5 (lower is better)
Translates to: GKQTILNLDNSRLPPSLAELLGR*VIYVKT
Trigger: AGTTTTGACATATATAACCAAACGGCCTAAGAGTTC...GGCCAGGGACGGGGGCAGGCGGGAGTTGTCCAGGTTTAAGATTGTTTGTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACTGAGGCAGAATTGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKLRQNC*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCAATTCTGCCTCAG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 90 bp TGCATTTCACCAGGACTTTGCTGGTATGATGAACCTGGAGAACAGTaGTTCTCTCTGGGTACTTTCATCACATGTCCTGGAAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: CISPGLCWYDEPGEQ*FSLGTFITCPGKPG
Trigger: CCCAGGCTTTCCAGGACATGTGATGAAAGTACCCAGAGAGAATCACTGTTCTCCAGGTTCATCATACCAGCAAAGTCCTGGTGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp GGAGTGGTAAGCCCCACCCATACTTGGTGGTGTCAAAGATGTGTCTaGTTGAACAAGCACTCCAGCTTGATTTTGAGGACCTACAATTTC +
Preference number: 5 (lower is better)
Translates to: GVVSPTHTWWCQRCV*LNKHSSLILRTYNF
Trigger: GAAATTGTAGGTCCTCAAAATCAAGCTGGAGTGCTTGTTCAACCAGACACATCTTTGACACCACCAAGTATGGGTGGGGCTTACCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 90 bp AAGATCCAGTGGGGCAGACTCAGAAGGCTTTCTAATGTCTTGCCTTaGGATAGTCCTAAGCCTAGGGTCAACCACTTGGTTTCCTTTACT +
Preference number: 5 (lower is better)
Translates to: KIQWGRLRRLSNVLP*DSPKPRVNHLVSFT
Trigger: AGTAAAGGAAACCAAGTGGTTGACCCTAGGCTTAGGACTATCCCAAGGCAAGACATTAGAAAGCCTTCTGAGTCTGCCCCACTGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCAGAGTCTGTCATGTTaGGTCAAGAACGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFQSLSC*VKNGAG
Trigger: CCCCGCCCCGTTCTTGACCAAACATGACAGACTCTG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTTTAGCTTGCCTGTATaGTTTCAGCTGATTGGCAAA +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIFSLPV*FQLIGK
Trigger: TTTGCCAATCAGCTGAAACAATACAGGCAAGCTAAA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCTCTCTGTTCAATACCTaGCTGAACTCCTTTCATTCT +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNISLFNT*LNSFHS
Trigger: AGAATGAAAGGAGTTCAGCAAGGTATTGAACAGAGA...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACACTCCAGCTTGATTTaGAGGACCTACAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRHSSLI*RTYNFR
Trigger: CCTGAAATTGTAGGTCCTCAAAATCAAGCTGGAGTG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAGGTTGGGTGCTGGTTaGTTCTTCATCTTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRRLGAG*FFIFLV
Trigger: TACCAAGAAGATGAAGAACAAACCAGCACCCAACCT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACATCTTCTTCCTTGCTaGGTGCCCTATGAGGTTGGG +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKHLLPC*VPYEVG
Trigger: CCCAACCTCATAGGGCACCAAGCAAGGAAGAAGATG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGATGCAAATCAAACTTaGCTCCACCAACAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRDANQT*LHQQKS
Trigger: GCTCTTCTGTTGGTGGAGCAAAGTTTGATTTGCATC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTTTGGCTGCTAATTTaGGATCAATGGACACTGTAT +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILWLLI*DQWTLY
Trigger: ATACAGTGTCCATTGATCCAAAATTAGCAGCCAAAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCGGAGAAGGTTCAGTTTaGTCACTACTTTTTAAGCCA +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIGEGSV*SLLFKP
Trigger: TGGCTTAAAAAGTAGTGACAAAACTGAACCTTCTCC...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAAGAAGAGGTATTCATaGGGGGAAAATGGCTACTTA +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIKKRYS*GENGYL
Trigger: TAAGTAGCCATTTTCCCCCAATGAATACCTCTTCTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCCTAAGTTACATCTCATaGGATGAGCCTATCCATACT +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNILSYIS*DEPIHT
Trigger: AGTATGGATAGGCTCATCCAATGAGATGTAACTTAG...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACAGGAAATTCTACTGTaGTGTCACCAGTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRQEILL*CHQCMS
Trigger: TGACATGCACTGGTGACACAACAGTAGAATTTCCTG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACAGAAAGCTCAATTATaGAAGCTTGCGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKQKAQL*KLAGWG
Trigger: CCCCCACCCCGCAAGCTTCAATAATTGAGCTTTCTG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCACCCCTGGAGGTGGTTaGGGAAGAGGAGTTATGCCA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFTPGGG*GRGVMP
Trigger: TGGCATAACTCCTCTTCCCAAACCACCTCCAGGGGT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAAGCCCCACCCATACTaGGTGGTGTCAAAGATGTGT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKKPHPY*VVSKMC
Trigger: ACACATCTTTGACACCACCAAGTATGGGTGGGGCTT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATCATCATCGCCTCTTTaGTGTTTGACATTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRSSSPL*CLTLVP
Trigger: TGGCACTAATGTCAAACACAAAAGAGGCGATGATGA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAATCCTTCATAACCACTaGATGAGACTCTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRILHNH*MRLCIG
Trigger: CCCAATACAGAGTCTCATCAAGTGGTTATGAAGGAT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGTTTGGACTGGGTTTTaGTGGAAGGATGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKVWTGF*WKDGFS
Trigger: GGAGAAGCCATCCTTCCACAAAAACCCAGTCCAAAC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAAATGAGCTGGCCACTTaGCCTAAACATGCTATGATT +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRNELAT*PKHAMI
Trigger: AATCATAGCATGTTTAGGCAAAGTGGCCAGCTCATT...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGACTGGTGGATCACTaGAGGCCAGGAGTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKRLVDH*RPGVQD
Trigger: ATCTTGAACTCCTGGCCTCAAGTGATCCACCAGTCT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTGAGGCAGAATTGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLRQNC*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCAATTCTGCCTCAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp GACCACCCCCACCAAGGTACAGCCTTCAACACAGTCCAACCCTCCAAAAACATCAAGTTATTCCTAATTTaGCCAAGTACTGGGTTAGTC +
Preference number: 5 (lower is better)
Translates to: DHPHQGTAFNTVQPSKNIKLFLI*PSTGLV
Trigger: GACTAACCCAGTACTTGGCAAAATTAGGAATAACTT...GATGTTTTTGGAGGGTTGGACTGTGTTGAAGGCTGTACCTTGGTGGGGGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 90 bp TATCGTAAAACTCAGCTGGGTTTTGCAGGGACTCATAATTGGTGTTaGGCTGCATTTCACCAGGACTTTGCTGGTATGATGAACCTGGAG +
Preference number: 5 (lower is better)
Translates to: YRKTQLGFAGTHNWC*AAFHQDFAGMMNLE
Trigger: CTCCAGGTTCATCATACCAGCAAAGTCCTGGTGAAATGCAGCTCAACACCAATTATGAGTCCCTGCAAAACCCAGCTGAGTTTTACGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATATGTTGACCCTTCTTaGATGTTATGTAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRYVDPS*MLCSFL
Trigger: CAGGAAGCTACATAACATCAAAGAAGGGTCAACATA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAACATTAGGCCCTTTATaGGTTCTTCCCCCACGTTCT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKTLGPL*VLPPRS
Trigger: AGAACGTGGGGGAAGAACCAATAAAGGGCCTAATGT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGTCCAGGACCTGGACTaGACCCAGAACTATAGATAT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKVQDLD*TQNYRY
Trigger: ATATCTATAGTTCTGGGTCAAGTCCAGGTCCTGGAC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACAAAGATGTGTCTGGTaGAACAAGCACTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKQRCVW*NKHSSL
Trigger: CAAGCTGGAGTGCTTGTTCAACCAGACACATCTTTG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTACAAAAAGAGCTCTTaGCACTGCAGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFYKKSS*HCREEA
Trigger: GGCCTCCTCCCTGCAGTGCAAAGAGCTCTTTTTGTA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGTCTCAATTGTGACCTaGGATCCTGGAGCATTATGC +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKVSIVT*DPGALC
Trigger: GCATAATGCTCCAGGATCCAAGGTCACAATTGAGAC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGTGATGAACCAGGGTTaGATCTGGGTAAGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFVMNQG*IWVSEG
Trigger: CCCCTCACTTACCCAGATCAAACCCTGGTTCATCAC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGGAGAAGGTTCAGTTTaGTCACTACTTTTTAAGCCA +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRGEGSV*SLLFKP
Trigger: TGGCTTAAAAAGTAGTGACAAAACTGAACCTTCTCC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGACTAAGTTACATCTCATaGGATGAGCCTATCCATACT +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRLSYIS*DEPIHT
Trigger: AGTATGGATAGGCTCATCCAATGAGATGTAACTTAG...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGATATGAGACAGCAGTaGCTGAATCTCAATTGTCAT +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRDMRQQ*LNLNCH
Trigger: ATGACAATTGAGATTCAGCAACTGCTGTCTCATATC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATTAGGCTCTTTCGGTaGCAGCCTAATTTGGGGGTT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIRLFR*QPNLGV
Trigger: AACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTGCAGTGATCCGAGATaGCACCATTACACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFCSDPR*HHYTPA
Trigger: GGCTGGAGTGTAATGGTGCAATCTCGGATCACTGCA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 90 bp TCTCCTGAAGAAGCTGTTGCTAGCTCTGATGTGGATGATGAACCGTaGTCCCTAGGGTCATACAAACTAATACCACTAAGAACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: SPEEAVASSDVDDEP*SLGSYKLIPLRTEV
Trigger: CACTTCAGTTCTTAGTGGTATTAGTTTGTATGACCCTAGGGATCACGGTTCATCATCCACATCAGAGCTAGCAACAGCTTCTTCAGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAGAACTATAGATATGTaGAGGGTGTGGACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKRTIDM*RVWTAS
Trigger: GGAAGCAGTCCACACCCTCAACATATCTATAGTTCT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAAGCCCCACCCATACTaGGTGGTGTCAAAGATGTGT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFKPHPY*VVSKMC
Trigger: ACACATCTTTGACACCACCAAGTATGGGTGGGGCTT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGATTTGCAAAGTTGGGTTaGGTTAGAGTAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRFAKLG*VRVMSI
Trigger: AATGGACATTACTCTAACCAAACCCAACTTTGCAAA...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGTGTTAATTTTGGCTTaGGCTGCTAATTTTGGATCA +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRVLILA*AANFGS
Trigger: TGATCCAAAATTAGCAGCCAAAGCCAAAATTAACAC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGTGAGGGGCACCCTTaGATGCATGTGAATCCTTCA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSEGHP*MHVNPS
Trigger: TGAAGGATTCACATGCATCAAAGGGTGCCCCTCACT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTCCTGAAGAAGCTGTaGCTAGCTCTGATGTGGATG +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLLKKL*LALMWM
Trigger: CATCCACATCAGAGCTAGCAACAGCTTCTTCAGGAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CACCAGGTAATCCCCTCTGTTACAGAATGCCAGCCGGGTGAGATCTTAAAGAGAGAACTCTTAGGCCGTTaGGTTATATATGTCAAAACT +
Preference number: 5 (lower is better)
Translates to: HQVIPSVTECQPGEILKRELLGR*VIYVKT
Trigger: AGTTTTGACATATATAACCAAACGGCCTAAGAGTTC...TCTCTTTAAGATCTCACCCGGCTGGCATTCTGTAACAGAGGGGATTACCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATAATAGGGAGGGCTTaGTCACAACTGGCAGATACT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKIIGRA*SQLADT
Trigger: AGTATCTGCCAGTTGTGACAAAGCCCTCCCTATTAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGAGTTCAAGATCAGCTaGGCCAACATGGTCAAACCC +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFEFKIS*ANMVKP
Trigger: GGGTTTGACCATGTTGGCCAAGCTGATCTTGAACTC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAGACTGGTGGATCACTaGAGGCCAGGAGTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFRLVDH*RPGVQD
Trigger: ATCTTGAACTCCTGGCCTCAAGTGATCCACCAGTCT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAGCATTTCCCCAACATTaGAGATACAACTTCGGGGAA +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKAFPQH*RYNFGE
Trigger: TTCCCCGAAGTTGTATCTCAAATGTTGGGGAAATGC...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAACCTTGCTGGTGTCTTTaGAGCAGACAGATTAACAAC +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKPCWCL*SRQINN
Trigger: GTTGTTAATCTGTCTGCTCAAAAGACACCAGCAAGG...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATCGCCTCTTTTGTGTTaGACATTAGTGCCAGCATTT +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKSPLLC*TLVPAF
Trigger: AAATGCTGGCACTAATGTCAAACACAAAAGAGGCGA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGTCTCAATTGTGACCTaGGATCCTGGAGCATTATGC +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFVSIVT*DPGALC
Trigger: GCATAATGCTCCAGGATCCAAGGTCACAATTGAGAC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCATTAGGCTCTTTCGGTaGCAGCCTAATTTGGGGGTT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFIRLFR*QPNLGV
Trigger: AACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAAT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTGGTGGCTCTTATATaGAATGAGCTGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLVALI*NELATL
Trigger: CAAAGTGGCCAGCTCATTCAATATAAGAGCCACCAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCACGTTCTTTTCGTTaGATTTTCTTCGGCAAGCCA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPRSFR*IFFGKP
Trigger: TGGCTTGCCGAAGAAAATCAAACGAAAAGAACGTGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCACTCCAGCTTGATTTaGAGGACCTACAATTTCAGG +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFHSSLI*RTYNFR
Trigger: CCTGAAATTGTAGGTCCTCAAAATCAAGCTGGAGTG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCAAACTCAGCTGGGTTTaGCAGGGACTCATAATTGGT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFKLSWV*QGLIIG
Trigger: ACCAATTATGAGTCCCTGCAAAACCCAGCTGAGTTT...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCCCACACGATGTGTTTaGCAAAGTTGGGTTTGGTTA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFPTRCV*QSWVWL
Trigger: TAACCAAACCCAACTTTGCAAAACACATCGTGTGGG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAAGAAGAGGTATTCATaGGGGGAAAATGGCTACTTA +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKKKRYS*GENGYL
Trigger: TAAGTAGCCATTTTCCCCCAATGAATACCTCTTCTT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCAGGAAATTCTACTGTaGTGTCACCAGTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFQEILL*CHQCMS
Trigger: TGACATGCACTGGTGACACAACAGTAGAATTTCCTG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCGCATTTCCCCAACATTaGAGATACAACTTCGGGGAA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFAFPQH*RYNFGE
Trigger: TTCCCCGAAGTTGTATCTCAAATGTTGGGGAAATGC...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 90 bp ATCATCATCATCGCCTCTTTTGTGTTTGACATTAGTGCCAGCATTTaGATGATGCAAATCAAACTTTGCTCCACCAACAGAAGAGCCTAT +
Preference number: 5 (lower is better)
Translates to: IIIIASFVFDISASI*MMQIKLCSTNRRAY
Trigger: ATAGGCTCTTCTGTTGGTGGAGCAAAGTTTGATTTGCATCATGCAAATGCTGGCACTAATGTCAAACACAAAAGAGGCGATGATGATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCCTCCCTGGTAACATTTaGCTCCACTATGATAGAACT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFLPGNI*LHYDRT
Trigger: AGTTCTATCATAGTGGAGCAAAATGTTACCAGGGAG...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCGCCTCTTTTGTGTTaGACATTAGTGCCAGCATTT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSPLLC*TLVPAF
Trigger: AAATGCTGGCACTAATGTCAAACACAAAAGAGGCGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCATCATCGCCTCTTTaGTGTTTGACATTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSSSPL*CLTLVP
Trigger: TGGCACTAATGTCAAACACAAAAGAGGCGATGATGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAATGTGTTTTGCAAAGTaGGGTTTGGTTAGAGTAATG +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKMCFAK*GLVRVM
Trigger: CATTACTCTAACCAAACCCAACTTTGCAAAACACAT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAATTCCCTCTCAAACATTaGAGGGCAAATTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKFPLKH*RANFCK
Trigger: TTTACAGAAATTTGCCCTCAAATGTTTGAGAGGGAA...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp CAGAGTTCTCGTTCACTTAACCACAACCCCATTTTAGCACAGAACTGCAGCAAAAAGTTATTCCTAATTTaGCCAAGTACTGGGTTAGTC +
Preference number: 5 (lower is better)
Translates to: QSSRSLNHNPILAQNCSKKLFLI*PSTGLV
Trigger: GACTAACCCAGTACTTGGCAAAATTAGGAATAACTT...TTTGCTGCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTCTCTGTTCAATACCTaGCTGAACTCCTTTCATTCT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFSLFNT*LNSFHS
Trigger: AGAATGAAAGGAGTTCAGCAAGGTATTGAACAGAGA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTTGCAAAGTTGGGTTaGGTTAGAGTAATGTCCATT +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFFAKLG*VRVMSI
Trigger: AATGGACATTACTCTAACCAAACCCAACTTTGCAAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS-3UTR CAA 90 bp ATTTCACAATTAGGCTCTTTCGGTTGCAGCCTAATTTGGGGGTTTGAAACATTCTTCCCTCTCAAACATTaGAGGGCAAATTTCTGTAAA +
Preference number: 5 (lower is better)
Translates to: ISQLGSFGCSLIWGFETFFPLKH*RANFCK
Trigger: TTTACAGAAATTTGCCCTCAAATGTTTGAGAGGGAA...GAATGTTTCAAACCCCCAAATTAGGCTGCAACCGAAAGAGCCTAATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp CGCCGGTGGCTGTGGCGTGGGAGCGGGCGGGCGGCGTaGAGCGACGCGGGGATTTGGACAGTGGCCGTAACG +
Preference number: 6 (lower is better)
Translates to: RRWLWRGSGRAA*SDAGIWTVAVT
Trigger: CGTTACGGCCACTGTCCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCCACGCCACAGCCACCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 90 bp GCTGTGGCGTGGGAGCGGGCGGGCGGCGTGCAGCGACGCGGGGATTaGGACAGTGGCCGTAACGGTGATTTCTCCTCACCAACATGGCGG +
Preference number: 6 (lower is better)
Translates to: AVAWERAGGVQRRGD*DSGRNGDFSSPTWR
Trigger: CCGCCATGTTGGTGAGGAGAAATCACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCCACGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp GGCTCTAACTGCAAACACTGGGCAACGGCCCCGCGCTaGCGGCGCTGCCGCTCTAGTCTCTATTCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: GSNCKHWATAPR*RRCRSSLYSPP
Trigger: CGGCGGCGAATAGAGACTAGAGCGGCAGCGCCGGCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp GGGAGCGGGCGGGCGGCGTGCAGCGACGCGGGGATTTaGACAGTGGCCGTAACGGTGATTTCTCCTCACCAA +
Preference number: 6 (lower is better)
Translates to: GSGRAACSDAGI*TVAVTVISPHQ
Trigger: TTGGTGAGGAGAAATCACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 72 bp TGGGAGCGGGCGGGCGGCGTGCAGCGACGCGGGGATTaGGACAGTGGCCGTAACGGTGATTTCTCCTCACCA +
Preference number: 6 (lower is better)
Translates to: WERAGGVQRRGD*DSGRNGDFSSP
Trigger: TGGTGAGGAGAAATCACCGTTACGGCCACTGTCCAAATCCCCGCGTCGCTGCACGCCGCCCGCCCGCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp CTATTAACAACCACGCCAGAGAGATGGGGCTCTAACTaGAAACACTGGGCAACGGCCCCGCGCTGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: LLTTTPERWGSN*KHWATAPRCRR
Trigger: GCGCCGGCAGCGCGGGGCCGTTGCCCAGTGTTTGCAGTTAGAGCCCCATCTCTCTGGCGTGGTTGTTAATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp TGTGCACTGCTGGGACCTGAACCTTACCAGAACTCCTaGGAACGTCCGCCTGTGGGTCAGCTGGCCCCTCAA +
Preference number: 6 (lower is better)
Translates to: CALLGPEPYQNS*ERPPVGQLAPQ
Trigger: TTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCCAGGAGTTCTGGTAAGGTTCAGGTCCCAGCAGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp TCTGGGGTCGGGCTCCCCTGTCCTGGCTGCCTTGCCTaGCTTGGATCACTGTACTGTGGCCTAATTAAGCCT +
Preference number: 6 (lower is better)
Translates to: SGVGLPCPGCLA*LGSLYCGLIKP
Trigger: AGGCTTAATTAGGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAGCCAGGACAGGGGAGCCCGACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp GGATCATTATCTGGGGTCGGGCTCCCCTGTCCTGGCTaGCTTGCCTGCCTTGGATCACTGTACTGTGGCCTA +
Preference number: 6 (lower is better)
Translates to: GSLSGVGLPCPG*LACLGSLYCGL
Trigger: TAGGCCACAGTACAGTGATCCAAGGCAGGCAAGGCAGCCAGGACAGGGGAGCCCGACCCCAGATAATGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp CTGAACCTTACCAGAACTCCTGGGAACGTCCGCCTGTaGGTCAGCTGGCCCCTCAAGAGTGACTCCCACGTT +
Preference number: 6 (lower is better)
Translates to: LNLTRTPGNVRL*VSWPLKSDSHV
Trigger: AACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCCAGGAGTTCTGGTAAGGTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 72 bp CTCTGTCGTGCCCTGCATGTTCAGAGTCTGTCATGTTaGGTCAAGAACGGGGCGGGGCTGGAGGGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: LCRALHVQSLSC*VKNGAGLEGRS
Trigger: AGACCTGCCCTCCAGCCCCGCCCCGTTCTTGACCAAACATGACAGACTCTGAACATGCAGGGCACGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp GAACGTCCGCCTGTGGGTCAGCTGGCCCCTCAAGAGTaGCTCCCACGTTTGGACTGGGTTTTTGTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: ERPPVGQLAPQE*LPRLDWVFVEG
Trigger: TCCTTCCACAAAAACCCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGACGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343936.4
ENST00000409871.6
ENST00000502881.2
CDS CCA 72 bp AGGAGGTCCTGCACATGGGTGATGTCCAGGGGAGCCTaGGTGCATCACAGGACTACTGTGTCCCTGAGACAT +
Preference number: 6 (lower is better)
Translates to: RRSCTWVMSRGA*VHHRTTVSLRH
Trigger: ATGTCTCAGGGACACAGTAGTCCTGTGATGCACCCAGGCTCCCCTGGACATCACCCATGTGCAGGACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp TTAGCACAGAACAGAACTCCTGGGAACGTCCGCCTGTaGGTCAGCTGGCCCCTCAAGAGTGACTCCCACGTT +
Preference number: 6 (lower is better)
Translates to: LAQNRTPGNVRL*VSWPLKSDSHV
Trigger: AACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCACAGGCGGACGTTCCCAGGAGTTCTGTTCTGTGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502881.2
CDS CCA 72 bp TGGGTCAGCTGGCCCCTCAAGAGTGACTCCCACGTTTaGACTGGGTTTTTGTGGAAGGATGGCTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: WVSWPLKSDSHV*TGFLWKDGFSR
Trigger: CCTGGAGAAGCCATCCTTCCACAAAAACCCAGTCCAAACGTGGGAGTCACTCTTGAGGGGCCAGCTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343936.4
ENST00000409871.6
ENST00000502881.2
CDS CCA 72 bp AGATTTGTCATCTGTTTCTCTACCGGGATCATTATCTaGGGTCGGGCTCCCCTGTCCTGGCTGCCTTGCCTG +
Preference number: 6 (lower is better)
Translates to: RFVICFSTGIII*GRAPLSWLPCL
Trigger: CAGGCAAGGCAGCCAGGACAGGGGAGCCCGACCCCAGATAATGATCCCGGTAGAGAAACAGATGACAAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp GTGTGGACTGCTTCCCTGAAATTGTGGTCCTGGTGGTaGGGCACTGGTATAAAATGCTGGTGGCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: VWTASLKLWSWW*GTGIKCWWLPP
Trigger: GGGAGGAAGCCACCAGCATTTTATACCAGTGCCTCACCACCAGGACCACAATTTCAGGGAAGCAGTCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp CTCTCTGGGTACTTTCATCACATGTCCTGGAAAGCCTaGGGAGTGGTAAGCCCCACCCATACTTGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: LSGYFHHMSWKA*GVVSPTHTWWC
Trigger: ACACCACCAAGTATGGGTGGGGCTTACCACTCCCCAGGCTTTCCAGGACATGTGATGAAAGTACCCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp CTGCCCCTGAGGGCTGTGATGAACCAGGGTTTGATCTaGGTAAGTGAGGGGCACCCTTTGATGCATGTGAAT +
Preference number: 6 (lower is better)
Translates to: LPLRAVMNQGLI*VSEGHPLMHVN
Trigger: ATTCACATGCATCAAAGGGTGCCCCTCACTTACCCAGATCAAACCCTGGTTCATCACAGCCCTCAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp TGGAAAGCCTGGGGAGTGGTAAGCCCCACCCATACTTaGTGGTGTCAAAGATGTGTCTGGTTGAACAAGCAC +
Preference number: 6 (lower is better)
Translates to: WKAWGVVSPTHT*WCQRCVWLNKH
Trigger: GTGCTTGTTCAACCAGACACATCTTTGACACCACCAAGTATGGGTGGGGCTTACCACTCCCCAGGCTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 72 bp CTGGAAAGCCTGGGGAGTGGTAAGCCCCACCCATACTaGGTGGTGTCAAAGATGTGTCTGGTTGAACAAGCA +
Preference number: 6 (lower is better)
Translates to: LESLGSGKPHPY*VVSKMCLVEQA
Trigger: TGCTTGTTCAACCAGACACATCTTTGACACCACCAAGTATGGGTGGGGCTTACCACTCCCCAGGCTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 90 bp AAATGCTCTGGAGGGGTTGGCAGAAGCCCAACCCCTGGAGGTGGTTaGGGAAGAGGAGTTATGCCACGCTTTCTAAGTTCCTCTAATTCT +
Preference number: 6 (lower is better)
Translates to: KCSGGVGRSPTPGGG*GRGVMPRFLSSSNS
Trigger: AGAATTAGAGGAACTTAGAAAGCGTGGCATAACTCCTCTTCCCAAACCACCTCCAGGGGTTGGGCTTCTGCCAACCCCTCCAGAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp TCCAGTGGGGCAGACTCAGAAGGCTTTCTAATGTCTTaGCTTGGGATAGTCCTAAGCCTAGGGTCAACCACT +
Preference number: 6 (lower is better)
Translates to: SSGADSEGFLMS*LGIVLSLGSTT
Trigger: AGTGGTTGACCCTAGGCTTAGGACTATCCCAAGGCAAGACATTAGAAAGCCTTCTGAGTCTGCCCCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp ACAGTGATTCTCTCTGGGTACTTTCATCACATGTCCTaGAAAGCCTGGGGAGTGGTAAGCCCCACCCATACT +
Preference number: 6 (lower is better)
Translates to: TVILSGYFHHMS*KAWGVVSPTHT
Trigger: AGTATGGGTGGGGCTTACCACTCCCCAGGCTTTCCAGGACATGTGATGAAAGTACCCAGAGAGAATCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 72 bp ATCCAGTGGGGCAGACTCAGAAGGCTTTCTAATGTCTaGCCTTGGGATAGTCCTAAGCCTAGGGTCAACCAC +
Preference number: 6 (lower is better)
Translates to: IQWGRLRRLSNV*PWDSPKPRVNH
Trigger: GTGGTTGACCCTAGGCTTAGGACTATCCCAAGGCAAGACATTAGAAAGCCTTCTGAGTCTGCCCCACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp GAGGGCTGTGATGAACCAGGGTTTGATCTGGGTAAGTaGGGGGCACCCTTTGATGCATGTGAATCCTTCATA +
Preference number: 6 (lower is better)
Translates to: EGCDEPGFDLGK*GAPFDACESFI
Trigger: TATGAAGGATTCACATGCATCAAAGGGTGCCCCTCACTTACCCAGATCAAACCCTGGTTCATCACAGCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp TTGACCCAGAACTATAGATATGTTGAGGGTGTGGACTaGTTCCCTGAAATTGTGGTCCTGGTGGTGAGGCAC +
Preference number: 6 (lower is better)
Translates to: LTQNYRYVEGVD*FPEIVVLVVRH
Trigger: GTGCCTCACCACCAGGACCACAATTTCAGGGAAGCAGTCCACACCCTCAACATATCTATAGTTCTGGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp AGCCCCACCCATACTTGGTGGTGTCAAAGATGTGTCTaGTTGAACAAGCACTCCAGCTTGATTTTGAGGACC +
Preference number: 6 (lower is better)
Translates to: SPTHTWWCQRCV*LNKHSSLILRT
Trigger: GGTCCTCAAAATCAAGCTGGAGTGCTTGTTCAACCAGACACATCTTTGACACCACCAAGTATGGGTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp CAATTTCCTGGGATCCCACGCAAGTCTAAGATCCAGTaGGGCAGACTCAGAAGGCTTTCTAATGTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: QFPGIPRKSKIQ*GRLRRLSNVLP
Trigger: AGGCAAGACATTAGAAAGCCTTCTGAGTCTGCCCCACTGGATCTTAGACTTGCGTGGGATCCCAGGAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 90 bp AAGTCTAAGATCCAGTGGGGCAGACTCAGAAGGCTTTCTAATGTCTaGCCTTGGGATAGTCCTAAGCCTAGGGTCAACCACTTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: KSKIQWGRLRRLSNV*PWDSPKPRVNHLVS
Trigger: GGAAACCAAGTGGTTGACCCTAGGCTTAGGACTATCCCAAGGCAAGACATTAGAAAGCCTTCTGAGTCTGCCCCACTGGATCTTAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp CTCAAGAGTGACTCCCACGTTTGGACTGGGTTTTTGTaGAAGGATGGCTTCTCCAGGAGAAGGTTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: LKSDSHVWTGFL*KDGFSRRRFSF
Trigger: AAAACTGAACCTTCTCCTGGAGAAGCCATCCTTCCACAAAAACCCAGTCCAAACGTGGGAGTCACTCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343936.4
ENST00000409871.6
ENST00000502881.2
CDS CAA 72 bp CCCACCCATACTTGGTGGTGTCAAAGATGTGTCTGGTaGAACAAGCACTCCAGCTTGATTTTGAGGACCTAC +
Preference number: 6 (lower is better)
Translates to: PTHTWWCQRCVW*NKHSSLILRTY
Trigger: GTAGGTCCTCAAAATCAAGCTGGAGTGCTTGTTCAACCAGACACATCTTTGACACCACCAAGTATGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 90 bp GTGGTAAGCCCCACCCATACTTGGTGGTGTCAAAGATGTGTCTGGTaGAACAAGCACTCCAGCTTGATTTTGAGGACCTACAATTTCAGG +
Preference number: 6 (lower is better)
Translates to: VVSPTHTWWCQRCVW*NKHSSLILRTYNFR
Trigger: CCTGAAATTGTAGGTCCTCAAAATCAAGCTGGAGTGCTTGTTCAACCAGACACATCTTTGACACCACCAAGTATGGGTGGGGCTTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp CCAGGACTTTGCTGGTATGATGAACCTGGAGAACAGTaGTTCTCTCTGGGTACTTTCATCACATGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: PGLCWYDEPGEQ*FSLGTFITCPG
Trigger: TCCAGGACATGTGATGAAAGTACCCAGAGAGAATCACTGTTCTCCAGGTTCATCATACCAGCAAAGTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp ACTCAGCTGGGTTTTGCAGGGACTCATAATTGGTGTTaGGCTGCATTTCACCAGGACTTTGCTGGTATGATG +
Preference number: 6 (lower is better)
Translates to: TQLGFAGTHNWC*AAFHQDFAGMM
Trigger: CATCATACCAGCAAAGTCCTGGTGAAATGCAGCTCAACACCAATTATGAGTCCCTGCAAAACCCAGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp CATCTTCTTCCTTGCTTGGTGCCCTATGAGGTTGGGTaGTGGTTTGTTCTTCATCTTCTTGGTATCTCTGAG +
Preference number: 6 (lower is better)
Translates to: HLLPCLVPYEVG*WFVLHLLGISE
Trigger: CTCAGAGATACCAAGAAGATGAAGAACAAACCAGCACCCAACCTCATAGGGCACCAAGCAAGGAAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp TGCTTCCCTGAAATTGTGGTCCTGGTGGTGAGGCACTaGTATAAAATGCTGGTGGCTTCCTCCCAATTTTAT +
Preference number: 6 (lower is better)
Translates to: CFPEIVVLVVRH*YKMLVASSQFY
Trigger: ATAAAATTGGGAGGAAGCCACCAGCATTTTATACCAGTGCCTCACCACCAGGACCACAATTTCAGGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp AAATCAAACTTTGCTCCACCAACAGAAGAGCCTATGTaGCCACTTCCATTCCCTCTCAATTTCCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: KSNFAPPTEEPM*PLPFPLNFLGS
Trigger: GGATCCCAGGAAATTGAGAGGGAATGGAAGTGGTCACATAGGCTCTTCTGTTGGTGGAGCAAAGTTTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 72 bp TTCCTTGCTTGGTGCCCTATGAGGTTGGGTGCTGGTTaGTTCTTCATCTTCTTGGTATCTCTGAGTAAGTCT +
Preference number: 6 (lower is better)
Translates to: FLAWCPMRLGAG*FFIFLVSLSKS
Trigger: AGACTTACTCAGAGATACCAAGAAGATGAAGAACAAACCAGCACCCAACCTCATAGGGCACCAAGCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp GAAGCTGTTGCTAGCTCTGATGTGGATGATGAACCGTaGTCCCTAGGGTCATACAAACTAATACCACTAAGA +
Preference number: 6 (lower is better)
Translates to: EAVASSDVDDEP*SLGSYKLIPLR
Trigger: TCTTAGTGGTATTAGTTTGTATGACCCTAGGGATCACGGTTCATCATCCACATCAGAGCTAGCAACAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp ATACCAGTTAACTGTATCATCTTCTTCCTTGCTTGGTaGCCTATGAGGTTGGGTGCTGGTTTGTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: IPVNCIIFFLAW*PMRLGAGLFFI
Trigger: GATGAAGAACAAACCAGCACCCAACCTCATAGGGCACCAAGCAAGGAAGAAGATGATACAGTTAACTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp ATTAGTGCCAGCATTTGCATGATGCAAATCAAACTTTaGTCCACCAACAGAAGAGCCTATGTGACCACTTCC +
Preference number: 6 (lower is better)
Translates to: ISASICMMQIKL*STNRRAYVTTS
Trigger: GGAAGTGGTCACATAGGCTCTTCTGTTGGTGGAGCAAAGTTTGATTTGCATCATGCAAATGCTGGCACTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp ACTGTCTCAATTGTGACCTTGGATCCTGGAGCATTATaGCAGGTGAGGCATCCAAAGGTATTAAGAAAGCTT +
Preference number: 6 (lower is better)
Translates to: TVSIVTLDPGAL*QVRHPKVLRKL
Trigger: AAGCTTTCTTAATACCTTTGGATGCCTCACCTGGCATAATGCTCCAGGATCCAAGGTCACAATTGAGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 90 bp ATCATCTTCTTCCTTGCTTGGTGCCCTATGAGGTTGGGTGCTGGTTaGTTCTTCATCTTCTTGGTATCTCTGAGTAAGTCTTACAAAAAG +
Preference number: 6 (lower is better)
Translates to: IIFFLAWCPMRLGAG*FFIFLVSLSKSYKK
Trigger: CTTTTTGTAAGACTTACTCAGAGATACCAAGAAGATGAAGAACAAACCAGCACCCAACCTCATAGGGCACCAAGCAAGGAAGAAGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp CCCTGGTTTATTATACTCTTGAAAGTCATCCGATACTaGAAACACATTAGGCCCTTTATTGGTTCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: PWFIILLKVIRY*KHIRPFIGSSP
Trigger: GGGGGAAGAACCAATAAAGGGCCTAATGTGTTTTCAGTATCGGATGACTTTCAAGAGTATAATAAACCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS TCA 72 bp CCTCTTTTGTGTTTGACATTAGTGCCAGCATTTGCATaGTGCAAATCAAACTTTGCTCCACCAACAGAAGAG +
Preference number: 6 (lower is better)
Translates to: PLLCLTLVPAFA*CKSNFAPPTEE
Trigger: CTCTTCTGTTGGTGGAGCAAAGTTTGATTTGCATCATGCAAATGCTGGCACTAATGTCAAACACAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CCA 72 bp TTCACCATGCCACATCCCATCACCAGAGTTATTGGGTaGCTGAAAATTATGTATAGAATGCTGTGCATAGTA +
Preference number: 6 (lower is better)
Translates to: FTMPHPITRVIG*LKIMYRMLCIV
Trigger: TACTATGCACAGCATTCTATACATAATTTTCAGCCACCCAATAACTCTGGTGATGGGATGTGGCATGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 90 bp TATAGAATGCTGTGCATAGTAATTATCGTAAAACTCAGCTGGGTTTaGCAGGGACTCATAATTGGTGTTGAGCTGCATTTCACCAGGACT +
Preference number: 6 (lower is better)
Translates to: YRMLCIVIIVKLSWV*QGLIIGVELHFTRT
Trigger: AGTCCTGGTGAAATGCAGCTCAACACCAATTATGAGTCCCTGCAAAACCCAGCTGAGTTTTACGATAATTACTATGCACAGCATTCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS CAA 72 bp CATGGGAAAATTTACAGTTGTCTCCCTGGTAACATTTaGCTCCACTATGATAGAACTTGCATGGAAATTCAT +
Preference number: 6 (lower is better)
Translates to: HGKIYSCLPGNI*LHYDRTCMEIH
Trigger: ATGAATTTCCATGCAAGTTCTATCATAGTGGAGCAAAATGTTACCAGGGAGACAACTGTAAATTTTCCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6
CDS GCA 72 bp ATGGGAAAATTTACAGTTGTCTCCCTGGTAACATTTTaGTCCACTATGATAGAACTTGCATGGAAATTCATT +
Preference number: 6 (lower is better)
Translates to: MGKFTVVSLVTF*STMIELAWKFI
Trigger: AATGAATTTCCATGCAAGTTCTATCATAGTGGAGCAAAATGTTACCAGGGAGACAACTGTAAATTTTCCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343936.4
ENST00000409871.6