RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H4 (Homo sapiens)

Ensembl gene IDs: ENSG00000130749

Ensembl transcript IDs: ENST00000253048.10, ENST00000594019.5, ENST00000595341.1, ENST00000597069.1, ENST00000601973.1

Found 649 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTCCGGGGCTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTaGGGACCAGGACAGACCCTGGTGTGGGCAAGCAGGGTGTGGCCC +
Preference number: 1 (lower is better)
Translates to: LSGAGLQCRHSGCVA*GPGQTLVWASRVWP
Trigger: GGGCCACACCCTGCTTGCCCACACCAGGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAGCCCCGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 90 bp ACCCAGCCTGCCTCCCCTTGCCCCCAAGTTCCCTACCCTGGGTGCTaGCCTGAATGCCACCCTAGGAAGGGTGGCTGGAGCCGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: TQPASPCPQVPYPGC*PECHPRKGGWSRSS
Trigger: AGAGCTGCGGCTCCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTGGGGGCAAGGGGAGGCAGGCTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 90 bp AACACCCAGCCTGCCTCCCCTTGCCCCCAAGTTCCCTACCCTGGGTaGTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGAGCCGCAGC +
Preference number: 1 (lower is better)
Translates to: NTQPASPCPQVPYPG*CPECHPRKGGWSRS
Trigger: GCTGCGGCTCCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTGGGGGCAAGGGGAGGCAGGCTGGGTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 90 bp TGGAGCTGTCCGGGGCTGGGCTGCAGTGCAGGCATAGCGGGTGCGTaGCTTGAGGACCAGGACAGACCCTGGTGTGGGCAAGCAGGGTGT +
Preference number: 1 (lower is better)
Translates to: WSCPGLGCSAGIAGA*LEDQDRPWCGQAGC
Trigger: ACACCCTGCTTGCCCACACCAGGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAGCCCCGGACAGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR TCA 90 bp CACTGGGCCTCCAGCAAGGCCCGGCCACGCAGAGCCCACAGAGTCTaGGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGT +
Preference number: 1 (lower is better)
Translates to: HWASSKARPRRAHRV*GQALAKVHRFAGMS
Trigger: ACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACTCTGTGGGCTCTGCGTGGCCGGGCCTTGCTGGAGGCCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 90 bp CTACCTTTGGGTCCAGTTCTCACTGTGGAGGCTTCTGCTGCAGGCTaGGGGGCATCCGCTTGCTCTAGACGGAGGGTGGCAGGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: LPLGPVLTVEASAAG*GASACSRRRVAGRA
Trigger: TGCCCTCCCTGCCACCCTCCGTCTAGAGCAAGCGGATGCCCCCCAGCCTGCAGCAGAAGCCTCCACAGTGAGAACTGGACCCAAAGGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR TCA 90 bp CAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTaGGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCCCTTTGT +
Preference number: 1 (lower is better)
Translates to: QALPWSWFRVSSGTG*GAFNTFPDTNCSLC
Trigger: ACAAAGGGAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 90 bp AGACAAACCAACCAACCAGATCCCAGCACTGACCCCTCAGGGCTGTaGAGCCCTGTAGGACACCCTGCCTCCTGGCTCCAAACTATGAGT +
Preference number: 1 (lower is better)
Translates to: RQTNQPDPSTDPSGL*SPVGHPASWLQTMS
Trigger: ACTCATAGTTTGGAGCCAGGAGGCAGGGTGTCCTACAGGGCTGCACAGCCCTGAGGGGTCAGTGCTGGGATCTGGTTGGTTGGTTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 90 bp ACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTaGGAGGAAAACAGAGAACACTTGGCCAGGAGCCACCCCAGGGTC +
Preference number: 1 (lower is better)
Translates to: THQYLMPCRSHSVRR*EENREHLARSHPRV
Trigger: GACCCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 90 bp GCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTaGAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAC +
Preference number: 1 (lower is better)
Translates to: AGLGKETRTHQYLMP*RSHSVRRCEENREH
Trigger: GTGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 90 bp CCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTaGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTG +
Preference number: 1 (lower is better)
Translates to: PQIPQSNTPWNTCIC*LGKGNPNTSIPHAL
Trigger: CAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTaGTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCC +
Preference number: 1 (lower is better)
Translates to: CPQIPQSNTPWNTCI*WLGKGNPNTSIPHA
Trigger: GGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 90 bp AGTCCGTTTCTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTaGAACACCTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACA +
Preference number: 1 (lower is better)
Translates to: SPFLKCPQIPQSNTP*NTCICWLGKGNPNT
Trigger: TGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAGAAACGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR TCA 90 bp GGCATGAGTCGGTTTGCTCAGCAGGAGCCCCTGAGCCCGCCACACTaGCCAGAACTTAAGATGGTTATATACAATTTACAAATCTCAAAG +
Preference number: 1 (lower is better)
Translates to: GMSRFAQQEPLSPPH*PELKMVIYNLQISK
Trigger: CTTTGAGATTTGTAAATTGTATATAACCATCTTAAGTTCTGGTCAGTGTGGCGGGCTCAGGGGCTCCTGCTGAGCAAACCGACTCATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CAA 90 bp GAGGTGGCTCTTCAGGACTCTGCCCCACACCGGCCCCCACTACCTTaGGGTCCAGTTCTCACTGTGGAGGCTTCTGCTGCAGGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: EVALQDSAPHRPPLP*GPVLTVEASAAGWG
Trigger: CCCCCAGCCTGCAGCAGAAGCCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGTCCTGAAGAGCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGGGCATGAGTCGGTTTaGTCAGCAGGAGCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPGHESV*SAGAPE
Trigger: CTCAGGGGCTCCTGCTGAGCAAACCGACTCATGCCC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGCCACTGCACGGATCCTaGAGCTGTCCGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKPLHGS*SCPGLG
Trigger: GCCCAGCCCCGGACAGCTCCAGGATCCGTGCAGTGG...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTCAGGGTCCCCATTGTTaGGGCCTGGCGGCGCAGCCA +
Preference number: 2 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSQGPHC*GLAAQP
Trigger: TGGCTGCGCCGCCAGGCCCCAACAATGGGGACCCTG...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCTCAGCAGGAGCCCCTaGGCCCGCCACACTGACCAG +
Preference number: 2 (lower is better)
Translates to: SLRPGTGESSQVCGHESVLSRSP*ARHTDQ
Trigger: CTGGTCAGTGTGGCGGGCTCAGGGGCTCCTGCTGAG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCACTCTCACTGTCTCCTaGGTGGGTTGTTACAGCCTG +
Preference number: 2 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASTLTVS*VGCYSL
Trigger: CAGGCTGTAACAACCCACTCAGGAGACAGTGAGAGT...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGGTGCTGCCCTGAATaGCACCCTAGGAAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGCCPE*HPRKGG
Trigger: GCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGCCCTGCCATGGTCTTaGTTCCGGGTCTCTTCGGGC +
Preference number: 2 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKALPWS*FRVSSG
Trigger: GCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCAGCCTGCCTCCCCTTaGCCCCAAGTTCCCTACCCT +
Preference number: 2 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQQPASP*PQVPYP
Trigger: AGGGTAGGGAACTTGGGGGCAAGGGGAGGCAGGCTG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGGGCTCTTCAGGACTCTaGCCCACACCGGCCCCCACT +
Preference number: 2 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQGSSGL*PTPAPT
Trigger: AGTGGGGGCCGGTGTGGGGCAGAGTCCTGAAGAGCC...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCTCTGAGGCCAGGCACTaGCGAAAGTTCACAGGTTTG +
Preference number: 2 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPSEARH*RKFTGL
Trigger: CAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGA...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCTCACTGTCTCCTGAGTaGGTTGTTACAGCCTGCACT +
Preference number: 2 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASSLSPE*VVTACT
Trigger: AGTGCAGGCTGTAACAACCCACTCAGGAGACAGTGA...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGCTTCTGCTGCAGGCTaGGGGGCATCCGCTTGCTCT +
Preference number: 2 (lower is better)
Translates to: GCGPPDRTGGVILTERACASAAG*GASACS
Trigger: AGAGCAAGCGGATGCCCCCCAGCCTGCAGCAGAAGC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CAA 90 bp TCTAGAAACGCCTGGACCTGCTTCCACGCAGGCCCTGCCATGGTCTaGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATAC +
Preference number: 2 (lower is better)
Translates to: SRNAWTCFHAGPAMV*VPGLFGHRVRSVQY
Trigger: GTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCAGGTCCAGGCGTTTCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTGGGTGCTGCCCTGAATaGCACCCTAGGAAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: SLRPGTGESSQVCGHESVGCCPE*HPRKGG
Trigger: GCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCC...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTCTGAGGCCAGGCACTaGCGAAAGTTCACAGGTTTG +
Preference number: 2 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRSEARH*RKFTGL
Trigger: CAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTGGCATAGCGGGTGCGTaGCTTGAGGACCAGGACAGA +
Preference number: 2 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSGIAGA*LEDQDR
Trigger: TCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCC...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCACAGGTTTGCGGGCATaGGTCGGTTTGCTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GCGPPDRTGGVILTERACTGLRA*VGLLSR
Trigger: CCTGCTGAGCAAACCGACTCATGCCCGCAAACCTGT...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAAGAGCCCACAGAGTCTaGGGCCAGGCACTGGCGAAA +
Preference number: 2 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRRAHRV*GQALAK
Trigger: TTTCGCCAGTGCCTGGCCTCAGACTCTGTGGGCTCT...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCTACCCTGGGTGCTaGCCTGAATGCCACCCTAGG +
Preference number: 2 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLPYPGC*PECHPR
Trigger: CCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGAAAGGGGCCATGCTTTaGCCAGAAAACCCACTGGGC +
Preference number: 2 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKKGAML*PENPLG
Trigger: GCCCAGTGGGTTTTCTGGGCAAAGCATGGCCCCTTT...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGCTCTAGACGGAGGGTaGCAGGGAGGGCACGTGTGG +
Preference number: 2 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTALDGG*QGGHVW
Trigger: CCACACGTGCCCTCCCTGCCACCCTCCGTCTAGAGC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGAAAACAGAGAACACTTaGCCAGGAGCCACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKKTENT*PGATPG
Trigger: CCCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTT...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACTCAGCAGGAGCCCCTaGGCCCGCCACACTGACCAG +
Preference number: 2 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVLSRSP*ARHTDQ
Trigger: CTGGTCAGTGTGGCGGGCTCAGGGGCTCCTGCTGAG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTAGCGGGTGCGTGGCTTaGGGACCAGGACAGACCCTG +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLSGCVA*GPGQTL
Trigger: CAGGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCT...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACACTTCCACGCAGGCCCTaGCATGGTCTTGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTLPRRP*HGLGSG
Trigger: CCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAG...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAAGAAACGCCTGGACCTaGTTCCACGCAGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTRNAWT*FHAGPA
Trigger: GGCAGGGCCTGCGTGGAAGCAGGTCCAGGCGTTTCT...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGGACAGACCCTGGTGTaGGCAAGCAGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTGQTLV*ASRVWP
Trigger: GGGCCACACCCTGCTTGCCCACACCAGGGTCTGTCC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACCACTGCACGGATCCTaGAGCTGTCCGGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVPLHGS*SCPGLG
Trigger: GCCCAGCCCCGGACAGCTCCAGGATCCGTGCAGTGG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCCCCATTGTTGGGGCCTaGCGGCGCAGCCACTGCACG +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICPIVGA*RRSHCT
Trigger: CGTGCAGTGGCTGCGCCGCCAGGCCCCAACAATGGG...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGTCTTCGGGCACAGGGTaGGGAGCGTTCAATACCTTC +
Preference number: 2 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQSSGTG*GAFNTF
Trigger: GAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGA...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGCCCTACCCTGGGTGCTaGCCTGAATGCCACCCTAGG +
Preference number: 2 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEPYPGC*PECHPR
Trigger: CCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGG...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGCAGCCTGCCTCCCCTTaGCCCCAAGTTCCCTACCCT +
Preference number: 2 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEQPASP*PQVPYP
Trigger: AGGGTAGGGAACTTGGGGGCAAGGGGAGGCAGGCTG...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGGGCATGAGTCGGTTTaGTCAGCAGGAGCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTGHESV*SAGAPE
Trigger: CTCAGGGGCTCCTGCTGAGCAAACCGACTCATGCCC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGTCCGGGGCTGGGCTaGAGTGCAGGCATAGCGGGT +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICCPGLG*SAGIAG
Trigger: ACCCGCTATGCCTGCACTGCAGCCCAGCCCCGGACA...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCGGCGCAGCCACTaGACGGATCCTGGAGCTGTC +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICWRRSH*TDPGAV
Trigger: GACAGCTCCAGGATCCGTGCAGTGGCTGCGCCGCCA...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGCTCTAGACGGAGGGTaGCAGGGAGGGCACGTGTGG +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICALDGG*QGGHVW
Trigger: CCACACGTGCCCTCCCTGCCACCCTCCGTCTAGAGC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGGACAGACCCTGGTGTaGGCAAGCAGGGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICGQTLV*ASRVWP
Trigger: GGGCCACACCCTGCTTGCCCACACCAGGGTCTGTCC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTAGAGCCCACAGAGTCTaGGGCCAGGCACTGGCGAAA +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLRAHRV*GQALAK
Trigger: TTTCGCCAGTGCCTGGCCTCAGACTCTGTGGGCTCT...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTTCCCTACCCTGGGTaGTGCCCTGAATGCCACCCT +
Preference number: 2 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEVPYPG*CPECHP
Trigger: AGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAAC...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGCGTGCTCCTAGGGGCTaGCTCCTAGAGGTGGCTCTT +
Preference number: 2 (lower is better)
Translates to: GNPNTSIPHALQVTQCKERAPRG*LLEVAL
Trigger: AAGAGCCACCTCTAGGAGGCAGCCCCTAGGAGCACG...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAGCCCTGCCATGGTCTTaGTTCCGGGTCTCTTCGGGC +
Preference number: 2 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVALPWS*FRVSSG
Trigger: GCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGC...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGCTTCTGCTGCAGGCTaGGGGGCATCCGCTTGCTCT +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICASAAG*GASACS
Trigger: AGAGCAAGCGGATGCCCCCCAGCCTGCAGCAGAAGC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGACCAGGACAGACCCTaGTGTGGGCAAGCAGGGTGT +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLDQDRP*CGQAGC
Trigger: ACACCCTGCTTGCCCACACCAGGGTCTGTCCTGGTC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGGTTCTAGAAACGCCTaGACCTGCTTCCACGCAGGC +
Preference number: 2 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEGSRNA*TCFHAG
Trigger: GCCTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACC...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGGCCCCCACTACCTTTaGGTCCAGTTCTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLGPHYL*VQFSLW
Trigger: CCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACACTGAGCCCGCCACACTaGCCAGAACTTAAGATGGTT +
Preference number: 2 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTLSPPH*PELKMV
Trigger: AACCATCTTAAGTTCTGGTCAGTGTGGCGGGCTCAG...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTCTTCGGGCACAGGGTaGGGAGCGTTCAATACCTTC +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLSSGTG*GAFNTF
Trigger: GAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGAAAACAGAGAACACTTaGCCAGGAGCCACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEKTENT*PGATPG
Trigger: CCCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTT...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CAA 90 bp AAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTaGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: KSHRATHLGTPASAG*GKETRTHQYLMPCR
Trigger: CCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCAATACTGACAGAACGTaGGTGCTCCTAGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICNTDRT*VLLGAA
Trigger: GGCAGCCCCTAGGAGCACGCACGTTCTGTCAGTATT...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGCACTGAAAAGACAGTaGTGGTGCACCCTAGGGTTC +
Preference number: 2 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICALKRQ*WCTLGF
Trigger: GAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCACATCAATACCTCATaGCCTGCAGGTCACACAGTG +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLHINTS*PAGHTV
Trigger: CACTGTGTGACCTGCAGGGCATGAGGTATTGATGTG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTCACTGTCTCCTGAGTaGGTTGTTACAGCCTGCACT +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLSLSPE*VVTACT
Trigger: AGTGCAGGCTGTAACAACCCACTCAGGAGACAGTGA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAACCAGATCCCAGCACTaGCCCCTCAGGGCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKTRSQH*PLRAVQ
Trigger: CTGCACAGCCCTGAGGGGTCAGTGCTGGGATCTGGT...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAGACCCCTCAGGGCTGTaGAGCCCTGTAGGACACCCT +
Preference number: 2 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKDPSGL*SPVGHP
Trigger: AGGGTGTCCTACAGGGCTGCACAGCCCTGAGGGGTC...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTGGGTTGTTACAGCCTaGACTGAAAAGACAGTGATG +
Preference number: 2 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLWVVTA*TEKTVM
Trigger: CATCACTGTCTTTTCAGTGCAGGCTGTAACAACCCA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAACTGAGCCCGCCACACTaGCCAGAACTTAAGATGGTT +
Preference number: 2 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKLSPPH*PELKMV
Trigger: AACCATCTTAAGTTCTGGTCAGTGTGGCGGGCTCAG...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR TCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAGCACTGAAAAGACAGTaGTGGTGCACCCTAGGGTTC +
Preference number: 2 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKALKRQ*WCTLGF
Trigger: GAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGC...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CAA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGGCCCTGCCATGGTCTaGGTTCCGGGTCTCTTCGGG +
Preference number: 3 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASGPAMV*VPGLFG
Trigger: CCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 72 bp CCGGGGCTGGGCTGCAGTGCAGGCATAGCGGGTGCGTaGCTTGAGGACCAGGACAGACCCTGGTGTGGGCAA +
Preference number: 3 (lower is better)
Translates to: PGLGCSAGIAGA*LEDQDRPWCGQ
Trigger: TTGCCCACACCAGGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 72 bp GCCTCCCCTTGCCCCCAAGTTCCCTACCCTGGGTGCTaGCCTGAATGCCACCCTAGGAAGGGTGGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: ASPCPQVPYPGC*PECHPRKGGWS
Trigger: GCTCCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTGGGGGCAAGGGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 72 bp CCTGCCTCCCCTTGCCCCCAAGTTCCCTACCCTGGGTaGTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: PASPCPQVPYPG*CPECHPRKGGW
Trigger: CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTGGGGGCAAGGGGAGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 72 bp GGTCCAGTTCTCACTGTGGAGGCTTCTGCTGCAGGCTaGGGGGCATCCGCTTGCTCTAGACGGAGGGTGGCA +
Preference number: 3 (lower is better)
Translates to: GPVLTVEASAAG*GASACSRRRVA
Trigger: TGCCACCCTCCGTCTAGAGCAAGCGGATGCCCCCCAGCCTGCAGCAGAAGCCTCCACAGTGAGAACTGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 72 bp GGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTTaGTCAGCAGGAGCCCCTGAGCCCGCCACACTGACC +
Preference number: 3 (lower is better)
Translates to: GESSQVCGHESV*SAGAPEPATLT
Trigger: GGTCAGTGTGGCGGGCTCAGGGGCTCCTGCTGAGCAAACCGACTCATGCCCGCAAACCTGTGAACTTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CAA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCCAGGGTCCCCATTGTaGGGGCCTGGCGGCGCAGCC +
Preference number: 3 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLPGSPL*GPGGAA
Trigger: GGCTGCGCCGCCAGGCCCCAACAATGGGGACCCTGG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGCGGCCCCCACTACCTTaGGGTCCAGTTCTCACTGTG +
Preference number: 3 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQRPPLP*GPVLTV
Trigger: CACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCG...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGGAAAACAGAGAACACTaGGCCAGGAGCCACCCCAGG +
Preference number: 3 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQENREH*ARSHPR
Trigger: CCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTTC...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGCCTGCATCTGCTGGCTaGGGAAAGGAAACCCGAACA +
Preference number: 3 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQPASAG*GKETRT
Trigger: TGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGG...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR TCA 72 bp CCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTaGGGAGCGTTCAATACCTTCCCAGACACCAACTGT +
Preference number: 3 (lower is better)
Translates to: PWSWFRVSSGTG*GAFNTFPDTNC
Trigger: ACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR-3UTR CAA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACATGTCTCCTGAGTGGGTaGTTACAGCCTGCACTGAAA +
Preference number: 3 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTCLLSG*LQPALK
Trigger: TTTCAGTGCAGGCTGTAACAACCCACTCAGGAGACA...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 72 bp TCACTCTCACTGTCTCCTGAGTGGGTTGTTACAGCCTaGACTGAAAAGACAGTGATGGTGCACCCTAGGGTT +
Preference number: 3 (lower is better)
Translates to: SLSLSPEWVVTA*TEKTVMVHPRV
Trigger: AACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGCTGTAACAACCCACTCAGGAGACAGTGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 72 bp CCACAGAGCAACACACCTTGGAACACCTGCATCTGCTaGCTTGGGAAAGGAAACCCGAACACATCAATACCT +
Preference number: 3 (lower is better)
Translates to: PQSNTPWNTCIC*LGKGNPNTSIP
Trigger: AGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 72 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTaGAACACCTGCATCTGCTGGCTTGGGAAAGGAAAC +
Preference number: 3 (lower is better)
Translates to: LKCPQIPQSNTP*NTCICWLGKGN
Trigger: GTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR GCA 72 bp GTGTATTCATACTTATTTTACAAACACCAAGGGCTGTaGCCTCTGCTTCAAGGCCAACACTGGTGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: VYSYLFYKHQGL*PLLQGQHWWLK
Trigger: CTTCAGCCACCAGTGTTGGCCTTGAAGCAGAGGGCACAGCCCTTGGTGTTTGTAAAATAAGTATGAATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CCA 72 bp CAAGGGCTGTGCCCTCTGCTTCAAGGCCAACACTGGTaGCTGAAGACAAATCTCATTAATGATTGTGTAAAA +
Preference number: 3 (lower is better)
Translates to: QGLCPLLQGQHW*LKTNLINDCVK
Trigger: TTTTACACAATCATTAATGAGATTTGTCTTCAGCCACCAGTGTTGGCCTTGAAGCAGAGGGCACAGCCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGGCACGGGCAGGTTGTaGACCCCGGGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASGTGRL*TPGWGG
Trigger: CCCACCCCAGCCCGGGGTGCACAACCTGCCCGTGCC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCCCACTGCACGGATCCTaGAGCTGTCCGGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASPLHGS*SCPGLG
Trigger: GCCCAGCCCCGGACAGCTCCAGGATCCGTGCAGTGG...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGGTCTGGGGTCCCGGCTaGGGCGAGGGTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWVWGPG*GEGQPA
Trigger: GGCTGGCTGACCCTCGCCTCAGCCGGGACCCCAGAC...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGGGGTCCCGCAGAGGGTaGCCGGGGAGTGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWGSRRG*PGSGSR
Trigger: CCTGGACCCACTCCCCGGGCACCCTCTGCGGGACCC...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGGGGGCCACCCTGCATaGGCCTGCCGTTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRGGHPA*ACRWER
Trigger: CCTCTCCCAACGGCAGGCCCATGCAGGGTGGCCCCC...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCCGGTGCGGGCGAAGCTaGGCTTGCTCAGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASRCGRS*ACSGSR
Trigger: ACGTGACCCTGAGCAAGCCCAGCTTCGCCCGCACCG...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGGTCGTAGGGAGCGGTaGCTGGTGGGGAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPGRRER*LVGRHP
Trigger: GGGATGCCTCCCCACCAGCCACCGCTCCCTACGACC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCACCAGATCCCAGCACTaGCCCCTCAGGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASTRSQH*PLRAVQ
Trigger: CTGCACAGCCCTGAGGGGTCAGTGCTGGGATCTGGT...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGAGGGTGGGCATGGATTaGAGGGCCGCGGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRRVGMD*RAAGTG
Trigger: CCCCGTGCCCGCGGCCCTGCAATCCATGCCCACCCT...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGACCCCTCAGGGCTGTaGAGCCCTGTAGGACACCCT +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASDPSGL*SPVGHP
Trigger: AGGGTGTCCTACAGGGCTGCACAGCCCTGAGGGGTC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGGCCTCGGCTGTCCTTaGAGCGGCGGTACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASGLGCP*SGGTGS
Trigger: TGAACCAGTACCGCCGCTCCAAGGACAGCCGAGGCC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGGCCGTTGGGAGAGGTTaGAGCCTGCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWAVGRG*SLRARG
Trigger: CCCCCTGGCCCGCAGGCTCCAACCTCTCCCAACGGC...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCCAGCCAGCTGTCCCGTaGGCCGCACCACGATCTCAA +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASQPAVP*AAPRSQ
Trigger: TTGAGATCGTGGTGCGGCCCACGGGACAGCTGGCTG...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCCGGTGCGGGCGAAGCTaGGCTTGCTCAGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPRCGRS*ACSGSR
Trigger: ACGTGACCCTGAGCAAGCCCAGCTTCGCCCGCACCG...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGGCCGGGGGTCCAGGGTaGGCATGGATTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRAGGPG*AWIAGP
Trigger: CGGCCCTGCAATCCATGCCCACCCTGGACCCCCGGC...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCACTGGGTTTGTCGCTaGAACCGGGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRHWVCR*NRGRPR
Trigger: CCTCGGCCGCCCCCGGTTCCAGCGACAAACCCAGTG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGCACCCGGGGGTCACTaGGTTTGTCGCTGGAACCGG +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPAPGGH*VCRWNR
Trigger: CCGGTTCCAGCGACAAACCCAGTGACCCCCGGGTGC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGCATCCCCACTCGGGCTaGCGGTGGGAGAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRHPHSG*RWERAP
Trigger: AGGCGCCCTCTCCCACCGCCAGCCCGAGTGGGGATG...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGCTCTAGACGGAGGGTaGCAGGGAGGGCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPALDGG*QGGHVW
Trigger: CCACACGTGCCCTCCCTGCCACCCTCCGTCTAGAGC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCCCATTGTTGGGGCCTaGCGGCGCAGCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRPIVGA*RRSHCT
Trigger: CGTGCAGTGGCTGCGCCGCCAGGCCCCAACAATGGG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGGCTCAGCTCCCCAACTaGAGCCGGGGGTCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWAQLPN*SRGSAG
Trigger: TCCAGCCGACCCCCGGCTTCAGTTGGGGAGCTGAGC...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGCTCAGCAGGAGCCCCTaGGCCCGCCACACTGACCAG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWLSRSP*ARHTDQ
Trigger: CTGGTCAGTGTGGCGGGCTCAGGGGCTCCTGCTGAG...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGTGCCTCGGCCGCGGCTaGTGCCCTCCTTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQCLGRG*CPPWHA
Trigger: GGCGTGCCAAGGAGGGCAGCAGCCGCGGCCGAGGCA...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGTGGGCCAGGATTCATaGCAGGGCCCATCGGCATGT +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASVGQDS*QGPSAC
Trigger: ACATGCCGATGGGCCCTGGCATGAATCCTGGCCCAC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCCCCCCAGCCCACTGCTaGTCAGCTCCCCAACTGAAG +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPPPAHC*SAPQLK
Trigger: CTTCAGTTGGGGAGCTGAGCAGCAGTGGGCTGGGGG...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCCCGAGCTCTTGCCATTaGCCTCAGCACCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASPSSCH*PQHPWA
Trigger: AGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGG...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGATCTGTCCGTGGGGGTaGCCCCATCAGCACCGGCCT +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRICPWG*PHQHRP
Trigger: AGGCCGGTGCTGATGGGGGCACCCCCACGGACAGAT...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGGCACGGGCAGGTTGTaGACCCCGGGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQGTGRL*TPGWGG
Trigger: CCCACCCCAGCCCGGGGTGCACAACCTGCCCGTGCC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGGGCATGAGTCGGTTTaGTCAGCAGGAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASGHESV*SAGAPE
Trigger: CTCAGGGGCTCCTGCTGAGCAAACCGACTCATGCCC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCTGGAGTATGCCTTCTTaGGCAGGGGCGTGGCATGCG +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASWSMPS*AGAWHA
Trigger: CGCATGCCACGCCCCTGCCCAAGAAGGCATACTCCA...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGCATGGGCCTGCCGTTaGGAGAGGTTGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRAWACR*ERLEPA
Trigger: CGCAGGCTCCAACCTCTCCCAACGGCAGGCCCATGC...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCCAGCCAGCTGTCCCGTaGGCCGCACCACGATCTCAA +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPQPAVP*AAPRSQ
Trigger: TTGAGATCGTGGTGCGGCCCACGGGACAGCTGGCTG...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGCACTGGGTTTGTCGCTaGAACCGGGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWHWVCR*NRGRPR
Trigger: CCTCGGCCGCCCCCGGTTCCAGCGACAAACCCAGTG...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGCACTCGGGCTGGCGGTaGGAGAGGGCGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKHSGWR*ERAPQQ
Trigger: CTGCTGAGGCGCCCTCTCCCACCGCCAGCCCGAGTG...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCCGTCCCGAAGAGGGTaGGCACGGGCAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRPSRRG*ARAGCA
Trigger: TGCACAACCTGCCCGTGCCCACCCTCTTCGGGACGG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGCCCAGAAAACCCACTaGGCCTCCAGCAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRAQKTH*ASSKAR
Trigger: CCGGGCCTTGCTGGAGGCCCAGTGGGTTTTCTGGGC...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGCCCATTGTTGGGGCCTaGCGGCGCAGCCACTGCACG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWPIVGA*RRSHCT
Trigger: CGTGCAGTGGCTGCGCCGCCAGGCCCCAACAATGGG...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGGAACTGCTGCAGCTGTaGCCGTGGGTCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRELLQL*PWVPQR
Trigger: CCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTTC...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCCAAGCACACACTTCCTaGGGCCCCTCAAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPQAHTS*GPSSGP
Trigger: TGGGCCACTTGAGGGGCCTCAGGAAGTGTGTGCTTG...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTGGGTCCCGCAGAGGGTaGCCGGGGAGTGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVGSRRG*PGSGSR
Trigger: CCTGGACCCACTCCCCGGGCACCCTCTGCGGGACCC...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCCCGAGCTCTTGCCATTaGCCTCAGCACCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPPSSCH*PQHPWA
Trigger: AGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGG...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCTTCCACGCAGGCCCTaGCATGGTCTTGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRLPRRP*HGLGSG
Trigger: CCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGGGCCCATTGGCCCTaGGGGTCCACCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQRAHWP*GSTGSR
Trigger: CCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCT...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCCAGAAGCCTCCACATaGCGGGTGAGTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRPEAST*RVSLGS
Trigger: GGACCCCAGACTCACCCGCCATGTGGAGGCTTCTGG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGTTCCTCCTCCTCCGTTaGGGGCGGCCCAGACCCCTT +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRFLLLR*GRPRPL
Trigger: AAGGGGTCTGGGCCGCCCCCAACGGAGGAGGAGGAA...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGGGAGCGGTGGCTGGTaGGGAGGCATCCCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQGSGGW*GGIPTR
Trigger: CCGAGTGGGGATGCCTCCCCACCAGCCACCGCTCCC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGTCAGCACCCTTGGGCTaGGCACCCGTGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWSAPLG*APVSAA
Trigger: GGCTGCTGACACGGGTGCCCAGCCCAAGGGTGCTGA...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGGTTCTAGAAACGCCTaGACCTGCTTCCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASGSRNA*TCFHAG
Trigger: GCCTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTCGGGTCGTAGAGGCTaGTACCGCTCAGCACACTGC +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRSGRRG*YRSAHC
Trigger: GCAGTGTGCTGAGCGGTATCAGCCTCTACGACCCGA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGACCAGATCCCAGCACTaGCCCCTCAGGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWTRSQH*PLRAVQ
Trigger: CTGCACAGCCCTGAGGGGTCAGTGCTGGGATCTGGT...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGGAGTCTGTGGGTTTCTaGAGCCGAGGGTCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWESVGF*SRGSVG
Trigger: CCCCACCGACCCTCGGCTGCAGAAACCCACAGACTC...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCTCAGCACACTGCTCTaGCCGCCCCCTCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQLSTLL*PPPPPW
Trigger: CCAGGGCGGAGGGGGCGGGCAGAGCAGTGTGCTGAG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGGGATGCCGCATCCTaGTCACCCTCGCGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQRDAAS*SPSRAG
Trigger: TCCGGCCCGCGAGGGTGAGCAGGATGCGGCATCCCT...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGGGGTGCTGCCCTGAATaGCACCCTAGGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRGCCPE*HPRKGG
Trigger: GCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCC...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGGGGCTGGGCTGCAGTaGAGGCATAGCGGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQGAGLQ*RHSGCV
Trigger: CACGCACCCGCTATGCCTGCACTGCAGCCCAGCCCC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGTCCCCATCCCCTGGCTaGAGGGTTCCCACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWSPSPG*RVPTQS
Trigger: GGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGA...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGGGCTGCTGCCCTCCTTaGCACGCCGGTACTGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRGCCPP*HAGTGS
Trigger: TGAACCAGTACCGGCGTGCCAAGGAGGGCAGCAGCC...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTGCTCATGCACCGGCATaGGCATCTGAGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSAHAPA*ASEGAR
Trigger: CCGGGCCCCCTCAGATGCCCATGCCGGTGCATGAGC...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCACCGCCCATTGGCCCTaGGGGTCCCATGTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACTAHWP*GSHVGP
Trigger: GGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGT...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTGGCCGCCAGGGCCCATaGGTGGGCCAGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSGRQGP*VGQDSC
Trigger: GCATGAATCCTGGCCCACCCATGGGCCCTGGCGGCC...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGCTTCGGGCTTGGAGGTaGGCAGGGCGCGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQLRAWR*AGREPA
Trigger: GGCTGGCTCGCGCCCTGCCCACCTCCAAGCCCGAAG...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGTGGGGCCCACAGGGCTaGAATGAAGGCTGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRWGPQG*NEGCLR
Trigger: CCGAAGGCAGCCTTCATTCCAGCCCTGTGGGCCCCA...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGGTCCAGGGTGGGCATaGATTGCAGGGCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQGPGWA*IAGPRA
Trigger: TGCCCGCGGCCCTGCAATCCATGCCCACCCTGGACC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCACTCGGGCTGGCGGTaGGAGAGGGCGCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVHSGWR*ERAPQQ
Trigger: CTGCTGAGGCGCCCTCTCCCACCGCCAGCCCGAGTG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCATCCCCACTCGGGCTaGCGGTGGGAGAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQHPHSG*RWERAP
Trigger: AGGCGCCCTCTCCCACCGCCAGCCCGAGTGGGGATG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGACAGACCCTGGTGTaGGCAAGCAGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGQTLV*ASRVWP
Trigger: GGGCCACACCCTGCTTGCCCACACCAGGGTCTGTCC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGAGGCTCCCCATCCCCTaGCTGCAGGGTTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWRLPIP*LQGSHS
Trigger: TGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCT...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGACAGGTTTGCGGGCATaGGTCGGTTTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRTGLRA*VGLLSR
Trigger: CCTGCTGAGCAAACCGACTCATGCCCGCAAACCTGT...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGAGAGCCCACAGAGTCTaGGGCCAGGCACTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWRAHRV*GQALAK
Trigger: TTTCGCCAGTGCCTGGCCTCAGACTCTGTGGGCTCT...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTAGCGGGTGCGTGGCTTaGGGACCAGGACAGACCCTG +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSSGCVA*GPGQTL
Trigger: CAGGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCT...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTTGTACATGTCCTGCTaGTGCAGCTGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRLYMSC*CSCCGD
Trigger: GTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTCCCGGTCCTGCTTGCTaGTCTCAGCCAGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSPGPAC*SQPASS
Trigger: CGAGGAGGCTGGCTGAGAGCAGCAAGCAGGACCGGG...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTCTCCCGGTCCTGCTTaGTGCTCTCAGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKSPGPA*CSQPAS
Trigger: GGAGGCTGGCTGAGAGCAGCAAGCAGGACCGGGAGA...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCCTCAGCACACTGCTCTaGCCGCCCCCTCCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFLSTLL*PPPPPW
Trigger: CCAGGGCGGAGGGGGCGGGCAGAGCAGTGTGCTGAG...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGCCCGTCTTGGGTGTCTaGTTCACCGTCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRPVLGV*FTVPKR
Trigger: CCTCTTCGGGACGGTGAAGCAGACACCCAAGACGGG...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTGGCTCTTCAGGACTCTaGCCCACACCGGCCCCCACT +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSGSSGL*PTPAPT
Trigger: AGTGGGGGCCGGTGTGGGGCAGAGTCCTGAAGAGCC...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTTCCCCCAGCACCCCTTaGGCCCATCTCTCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSSPSTP*AHLSGC
Trigger: ACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGCCGTTGGGAGAGGTTaGAGCCTGCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFAVGRG*SLRARG
Trigger: CCCCCTGGCCCGCAGGCTCCAACCTCTCCCAACGGC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGATGGCTTCGGCCGGCCTaGGGGCCCTCCCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRWLRPA*GPSLRE
Trigger: TTCTCTGAGGGAGGGCCCCCAGGCCGGCCGAAGCCA...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGGGTCCCGAATCACCTaGGCCAGACCCGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQGSRIT*ARPARS
Trigger: GCTTCTGGCGGGTCTGGCCCAGGTGATTCGGGACCC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTGCCGGGGGTCCAGGGTaGGCATGGATTGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLAGGPG*AWIAGP
Trigger: CGGCCCTGCAATCCATGCCCACCCTGGACCCCCGGC...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGTGGCGCCCTGTGTGCTaGAATCCGTGGAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQWRPVC*NPWRRP
Trigger: CGGGCGCCTCCACGGATTCCAGCACACAGGGCGCCA...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTCCGTCCCGAAGAGGGTaGGCACGGGCAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSPSRRG*ARAGCA
Trigger: TGCACAACCTGCCCGTGCCCACCCTCTTCGGGACGG...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTTCCTGAGCCCGTCTTaGGTGTCTGCTTCACCGTCC +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRFLSPS*VSASPS
Trigger: GGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGCTGGCTGGACACTACTaGCAAAAGGGGGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWLAGHY*QKGEAV
Trigger: CACGGCCTCCCCCTTTTGCCAGTAGTGTCCAGCCAG...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGCTGGCTGGACACTACTaGCAAAAGGGGGAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRLAGHY*QKGEAV
Trigger: CACGGCCTCCCCCTTTTGCCAGTAGTGTCCAGCCAG...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGGGCATAGCGGGTGCGTaGCTTGAGGACCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWGIAGA*LEDQDR
Trigger: TCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCC...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAAGCGGGTGCGTGGCTTaGGGACCAGGACAGACCCTG +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRSGCVA*GPGQTL
Trigger: CAGGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCT...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGCAAGCACACACTTCCTaGGGCCCCTCAAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKQAHTS*GPSSGP
Trigger: TGGGCCACTTGAGGGGCCTCAGGAAGTGTGTGCTTG...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCTCGGCCGCGGCTGCTaGCCTCCTTGGCACGCCGGT +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLLGRGC*PPWHAG
Trigger: ACCGGCGTGCCAAGGAGGGCAGCAGCCGCGGCCGAG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGGAGAGGTTGGAGCCTaGGGGCCAGGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTGEVGA*GPGGRG
Trigger: TCCTCGGCCCCCTGGCCCGCAGGCTCCAACCTCTCC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGATGCTCAGGGAAGAGGTaGTCCCCAGGCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRCSGKR*SPGSPG
Trigger: GCCAGGGGAGCCTGGGGAGCACCTCTTCCCTGAGCA...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGTCATTCTCCCGGTCCTaGTTGCTGCTCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWSFSRS*LLLSAS
Trigger: GCTGGCTGAGAGCAGCAAGCAGGACCGGGAGAATGA...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGGCGAAGCTGGGCTTaGTCAGGGTCACGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGRSWA*SGSRPS
Trigger: AGAAGGACGTGACCCTGAGCAAGCCCAGCTTCGCCC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTGGGGGCACTGCGTCCTaGTTGGGGATGGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLGGTAS*LGMGRG
Trigger: CCCCCTACCCATCCCCAAGCAGGACGCAGTGCCCCC...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGGGGGCACTGCGTCCTaGTTGGGGATGGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFGGTAS*LGMGRG
Trigger: CCCCCTACCCATCCCCAAGCAGGACGCAGTGCCCCC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTGGTTGGCGCCCTGTGTaGTGGAATCCGTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVGWRPV*WNPWRR
Trigger: GCGCCTCCACGGATTCCAGCACACAGGGCGCCAACC...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCGGCTCTGTGGCTTTaGCCCCCGCGTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLPALWL*PPRWES
Trigger: GGACTCCCAACGCGGGGGGCAAAGCCACAGAGCCGG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCCCTACCCTGGGTGCTaGCCTGAATGCCACCCTAGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQPYPGC*PECHPR
Trigger: CCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCAGAAACGCCTGGACCTaGTTCCACGCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACRNAWT*FHAGPA
Trigger: GGCAGGGCCTGCGTGGAAGCAGGTCCAGGCGTTTCT...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGCGTGCTCCTAGGGGCTaGCTCCTAGAGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKRAPRG*LLEVAL
Trigger: AAGAGCCACCTCTAGGAGGCAGCCCCTAGGAGCACG...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGACCCCTCAGGGCTGTaGAGCCCTGTAGGACACCCT +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQDPSGL*SPVGHP
Trigger: AGGGTGTCCTACAGGGCTGCACAGCCCTGAGGGGTC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTTGGAGCGGCGGTACTaGTTCAGCTCCTTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRLERRY*FSSLEY
Trigger: GTACTCCAAGGAGCTGAACCAGTACCGCCGCTCCAA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCTTCTTGTCCGACTGCTaGTGGGGCTTGTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPFLSDC*WGLSWS
Trigger: TGACCATGACAAGCCCCACCAGCAGTCGGACAAGAA...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACTGCTGCGGGGACAGTaGCTCATGCACCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRLLRGQ*LMHRHG
Trigger: CCCATGCCGGTGCATGAGCCACTGTCCCCGCAGCAG...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAAGGGCCCATTGGCCCTaGGGGTCCACCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTRAHWP*GSTGSR
Trigger: CCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCT...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGGCCGTAGGGCATCATTaGAGGGCCGCCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQAVGHH*RAARAH
Trigger: ATGGGCCCTGGCGGCCCTCCAATGATGCCCTACGGC...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTAGGGTGCCCGGGGAGTaGGTCCAGGGGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSRVPGE*VQGNVH
Trigger: GTGAACATTCCCCTGGACCCACTCCCCGGGCACCCT...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTGGTCCAGGGTGGGCATaGATTGCAGGGCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLGPGWA*IAGPRA
Trigger: TGCCCGCGGCCCTGCAATCCATGCCCACCCTGGACC...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGGTAGGGAGCGGTGGCTaGTGGGGAGGCATCCCCACT +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQVGSGG*WGGIPT
Trigger: AGTGGGGATGCCTCCCCACCAGCCACCGCTCCCTAC...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGCTTCTGCTGCAGGCTaGGGGGCATCCGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQASAAG*GASACS
Trigger: AGAGCAAGCGGATGCCCCCCAGCCTGCAGCAGAAGC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGAAAACAGAGAACACTTaGCCAGGAGCCACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRKTENT*PGATPG
Trigger: CCCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTT...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGTCGGGTCGTAGAGGCTaGTACCGCTCAGCACACTGC +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQSGRRG*YRSAHC
Trigger: GCAGTGTGCTGAGCGGTATCAGCCTCTACGACCCGA...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACATCATCCCTCCTCGGCTaGCACCTCGGCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTSSLLG*HLGLGP
Trigger: GGGGCCGAGGCCGAGGTGGCAGCCGAGGAGGGATGA...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCCTGCATGGGCCTaGCGTTGGGAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRHPAWA*RWERLE
Trigger: CTCCAACCTCTCCCAACGGCAGGCCCATGCAGGGTG...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACCCCCAGCCCACTGCTaGTCAGCTCCCCAACTGAAG +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRPPAHC*SAPQLK
Trigger: CTTCAGTTGGGGAGCTGAGCAGCAGTGGGCTGGGGG...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGATGTGGCTGAACTGCTaGAGCTGTGACCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKMWLNC*SCDRGS
Trigger: GGACCCACGGTCACAGCTGCAGCAGTTCAGCCACAT...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCTGGAGGCCGAGCTCTTaGCATTGCCCTCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACWRPSS*HCPQHP
Trigger: AGGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCA...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCCCGTCTTGGGTGTCTaGTTCACCGTCCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQPVLGV*FTVPKR
Trigger: CCTCTTCGGGACGGTGAAGCAGACACCCAAGACGGG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAAGGGATGCCGCATCCTaGTCACCCTCGCGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGRDAAS*SPSRAG
Trigger: TCCGGCCCGCGAGGGTGAGCAGGATGCGGCATCCCT...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACAGCCTGCCTCCCCTTaGCCCCAAGTTCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRQPASP*PQVPYP
Trigger: AGGGTAGGGAACTTGGGGGCAAGGGGAGGCAGGCTG...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCAGCCTGCCTCCCCTTaGCCCCAAGTTCCCTACCCT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQQPASP*PQVPYP
Trigger: AGGGTAGGGAACTTGGGGGCAAGGGGAGGCAGGCTG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCTTCCACGCAGGCCCTaGCATGGTCTTGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVLPRRP*HGLGSG
Trigger: CCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGAGAAACGCCTGGACCTaGTTCCACGCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQRNAWT*FHAGPA
Trigger: GGCAGGGCCTGCGTGGAAGCAGGTCCAGGCGTTTCT...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCGTGCTCCTAGGGGCTaGCTCCTAGAGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQRAPRG*LLEVAL
Trigger: AAGAGCCACCTCTAGGAGGCAGCCCCTAGGAGCACG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCTGGCGGCGCAGCCACTaGACGGATCCTGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFWRRSH*TDPGAV
Trigger: GACAGCTCCAGGATCCGTGCAGTGGCTGCGCCGCCA...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGTGGGACGGCGCATATaGGGGGCTGTACTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKVGRRI*GAVLSV
Trigger: TACAGAGAGTACAGCCCCCCATATGCGCCGTCCCAC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTTCTTGTCCGACTGCTaGTGGGGCTTGTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRFLSDC*WGLSWS
Trigger: TGACCATGACAAGCCCCACCAGCAGTCGGACAAGAA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTGGCTAAAATTACAGTaGTCTCCCCAGGTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRWLKLQ*SPQVQR
Trigger: GCGCTGCACCTGGGGAGACCACTGTAATTTTAGCCA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCAAGCCGGGGGTCGGCTaGACGTCTGCTGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFKPGVG*TSAASR
Trigger: CCTTGAGGCAGCAGACGTCCAGCCGACCCCCGGCTT...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACCAGAAGCCTCCACATaGCGGGTGAGTCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRPEAST*RVSLGS
Trigger: GGACCCCAGACTCACCCGCCATGTGGAGGCTTCTGG...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGTGGGGCCCACAGGGCTaGAATGAAGGCTGCCTTCGG +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQWGPQG*NEGCLR
Trigger: CCGAAGGCAGCCTTCATTCCAGCCCTGTGGGCCCCA...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCACGTCCTTCTTGATGTaGCTGAACTGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPTSFLM*LNCCSC
Trigger: ACAGCTGCAGCAGTTCAGCCACATCAAGAAGGACGT...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGCACTGCGTCCTGCTTaGGGATGGGTAGGGGGATCA +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQALRPA*GWVGGS
Trigger: TGATCCCCCTACCCATCCCCAAGCAGGACGCAGTGC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGGGAGCGGTGGCTGGTaGGGAGGCATCCCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPGSGGW*GGIPTR
Trigger: CCGAGTGGGGATGCCTCCCCACCAGCCACCGCTCCC...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTTCAGCACCCTTGGGCTaGGCACCCGTGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLSAPLG*APVSAA
Trigger: GGCTGCTGACACGGGTGCCCAGCCCAAGGGTGCTGA...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGGGCTGCAGCAGCCTTaGGCCGGGGCCGGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLGLQQP*AGAGCS
Trigger: GCTACAACCGGCCCCGGCCCAAGGCTGCTGCAGCCC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTTCCTGAGCCCGTCTTaGGTGTCTGCTTCACCGTCC +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKFLSPS*VSASPS
Trigger: GGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAA...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCTCACTGTCTCCTGAGTaGGTTGTTACAGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPSLSPE*VVTACT
Trigger: AGTGCAGGCTGTAACAACCCACTCAGGAGACAGTGA...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTGCTTCTGCTGCAGGCTaGGGGGCATCCGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVASAAG*GASACS
Trigger: AGAGCAAGCGGATGCCCCCCAGCCTGCAGCAGAAGC...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGACCAGGACAGACCCTaGTGTGGGCAAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACDQDRP*CGQAGC
Trigger: ACACCCTGCTTGCCCACACCAGGGTCTGTCCTGGTC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACAGGGTCCCCATTGTTaGGGCCTGGCGGCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGQGPHC*GLAAQP
Trigger: TGGCTGCGCCGCCAGGCCCCAACAATGGGGACCCTG...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGCTCAGCTCCCCAACTaGAGCCGGGGGTCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLAQLPN*SRGSAG
Trigger: TCCAGCCGACCCCCGGCTTCAGTTGGGGAGCTGAGC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGAACTGCTGCAGCTGTaGCCGTGGGTCCCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTELLQL*PWVPQR
Trigger: CCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTTC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGCAAATGGGCTTCCTaGGCCCGTCTTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQSKWAS*ARLGCL
Trigger: CAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCT...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGAGTGGTCTCCCCAGGTaGAGCGCCCTTCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQSGLPR*SALPRS
Trigger: ACTTCGTGGAAGGGCGCTGCACCTGGGGAGACCACT...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGAGTGGTCTCCCCAGGTaGAGCGCCCTTCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQSGLPR*SALPRS
Trigger: ACTTCGTGGAAGGGCGCTGCACCTGGGGAGACCACT...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGCTCGGCACCTGCTTCTaGATCATCGGCCAACATCTT +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWLGTCF*IIGQHL
Trigger: AAGATGTTGGCCGATGATGCAGAAGCAGGTGCCGAG...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGGAGAGGTTGGAGCCTaGGGGCCAGGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICGEVGA*GPGGRG
Trigger: TCCTCGGCCCCCTGGCCCGCAGGCTCCAACCTCTCC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTTGTTGTACATGTCCTaGTGCTGCAGCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKLLYMS*CCSCCG
Trigger: CCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAA...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTTCGGGCTCCAGAGGGTaGTCAGGGAAGAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLSGSRG*SGKRCS
Trigger: GGAGCACCTCTTCCCTGAGCACCCTCTGGAGCCCGA...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGTCCTCCTCCTCCTGCTaGTTCTGCTGGATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQSSSSC*FCWILR
Trigger: CCTGAGGATCCAGCAGAAGCAGCAGGAGGAGGAGGA...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGAGTCTGTGGGTTTCTaGAGCCGAGGGTCGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFESVGF*SRGSVG
Trigger: CCCCACCGACCCTCGGCTGCAGAAACCCACAGACTC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACCGGCTCTGTGGCTTTaGCCCCCGCGTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTPALWL*PPRWES
Trigger: GGACTCCCAACGCGGGGGGCAAAGCCACAGAGCCGG...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGTTCCAGGGCAGACTTaGGGACGAACGGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFVPGQT*GRTGAP
Trigger: AGGAGCCCCCGTTCGTCCGCAAGTCTGCCCTGGAAC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAATCTGTCCGTGGGGGTaGCCCCATCAGCACCGGCCT +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGICPWG*PHQHRP
Trigger: AGGCCGGTGCTGATGGGGGCACCCCCACGGACAGAT...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGTTCCCTACCCTGGGTaGTGCCCTGAATGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRVPYPG*CPECHP
Trigger: AGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAAC...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGGGGCTGGGCTGCAGTaGAGGCATAGCGGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTGAGLQ*RHSGCV
Trigger: CACGCACCCGCTATGCCTGCACTGCAGCCCAGCCCC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGTTTCCGGTGTCACCTaGATCCCCCAGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFVSGVT*IPQESG
Trigger: CCCGGACTCCTGGGGGATGCAGGTGACACCGGAAAC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCAGTTCCCAGTGGTGTaGTACAGCTTACACGGGAAA +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRQFPVV*YSLHGK
Trigger: TTTCCCGTGTAAGCTGTACCACACCACTGGGAACTG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGTCGGTCAGAGGGTCGTaGGAAAACATGCAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRSVRGS*ENMQSS
Trigger: TGACGACTGCATGTTTTCCCACGACCCTCTGACCGA...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGCATGGGCCTGCCGTTaGGAGAGGTTGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTAWACR*ERLEPA
Trigger: CGCAGGCTCCAACCTCTCCCAACGGCAGGCCCATGC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGCCAGGGCCCATGGGTaGGCCAGGATTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTARAHG*ARIHAR
Trigger: CCTGGCATGAATCCTGGCCCACCCATGGGCCCTGGC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAAAGCCGGGGGTCGGCTaGACGTCTGCTGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTKPGVG*TSAASR
Trigger: CCTTGAGGCAGCAGACGTCCAGCCGACCCCCGGCTT...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAGGGTCCCGAATCACCTaGGCCAGACCCGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGGSRIT*ARPARS
Trigger: GCTTCTGGCGGGTCTGGCCCAGGTGATTCGGGACCC...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCGTCCTGCTTGGGGATaGGTAGGGGGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQRPAWG*VGGSGP
Trigger: AGGACCTGATCCCCCTACCCATCCCCAAGCAGGACG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAGTGTGCTGGAATCCGTaGAGGCGCCCGGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVVCWNP*RRPGAA
Trigger: GGCAGCGCCCGGGCGCCTCCACGGATTCCAGCACAC...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCCAAAGTCGGGGAGGTTaGCGCCCTGTGTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACQSRGG*RPVCWN
Trigger: ATTCCAGCACACAGGGCGCCAACCTCCCCGACTTTG...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGCCCTGCCATGGTCTTaGTTCCGGGTCTCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFALPWS*FRVSSG
Trigger: GCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAGCTCTAGACGGAGGGTaGCAGGGAGGGCACGTGTGG +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGALDGG*QGGHVW
Trigger: CCACACGTGCCCTCCCTGCCACCCTCCGTCTAGAGC...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCAGGGTCCCCATTGTTaGGGCCTGGCGGCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLQGPHC*GLAAQP
Trigger: TGGCTGCGCCGCCAGGCCCCAACAATGGGGACCCTG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGCAGAGCAACACACCTTaGAACACCTGCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRQSNTP*NTCICW
Trigger: CCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTG...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTGGCCTGCAGCCACATaGTGGGCCAGGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLWPAAT*WARETG
Trigger: GCCCGTCTCCCTGGCCCACCATGTGGCTGCAGGCCA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGCTTTCTCACTGGGGCTaGAATCCGAGTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWLSHWG*NPSHLR
Trigger: TCTCAGATGACTCGGATTTCAGCCCCAGTGAGAAAG...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR TCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGCTCATCCTCATCACTTaGGTACCAGTTTCCGGTGTC +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRLILIT*VPVSGV
Trigger: GACACCGGAAACTGGTACTCAAGTGATGAGGATGAG...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAAGCAAATGGGCTTCCTaGGCCCGTCTTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRSKWAS*ARLGCL
Trigger: CAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCT...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCCTCAGCAGGAGCCCCTaGGCCCGCCACACTGACCAG +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICLSRSP*ARHTDQ
Trigger: CTGGTCAGTGTGGCGGGCTCAGGGGCTCCTGCTGAG...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTAAGCTGGAGGCCAGGTaGCGAGAGTCGGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLKLEAR*RESEVS
Trigger: GGAAACCTCCGACTCTCGGCACCTGGCCTCCAGCTT...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTCCTTTCTTGTCCGACTaGTGGTGGGGCTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSPFLSD*WWGLSW
Trigger: CCATGACAAGCCCCACCAGCAGTCGGACAAGAAAGG...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCCTTTCTTGTCCGACTaGTGGTGGGGCTTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQPFLSD*WWGLSW
Trigger: CCATGACAAGCCCCACCAGCAGTCGGACAAGAAAGG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGATGCTGCTGCAGCTGCTaGGGGGACAGTGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGCCCSC*GDSGSC
Trigger: GCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCA...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGTCTGCGTGCATGTCTaGGTGCATGTCAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQVCVHV*VHVRVH
Trigger: ATGCACCCTGACATGCACGCAGACATGCACGCAGAC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGGCCCATCGGCATGTCTaGGTGCATGTCTGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQAHRHV*VHVCVH
Trigger: ATGCACGCAGACATGCACGCAGACATGCCGATGGGC...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCCGGGCTCCATCTCCATaGCCTCCTGCTGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFRAPSP*PPAAGR
Trigger: TCTACCAGCAGCAGGAGGGCATGGAGATGGAGCCCG...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCGGCTGGACGTCTGCTaGCTCAAGGTCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVRLDVC*LKVFRM
Trigger: CATCCTGAAGACCTTGAGGCAGCAGACGTCCAGCCG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCAGACCCCTTGGAACTaGTGGGGCCCACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLQTPWN*WGPQGW
Trigger: CCAGCCCTGTGGGCCCCAGCAGTTCCAAGGGGTCTG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGATTCCAGAGCACGGTaGGGGCGAAGCTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTDSRAR*GRSWAC
Trigger: GCAAGCCCAGCTTCGCCCGCACCGTGCTCTGGAATC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGGTTGGCGCCCTGTGTaGTGGAATCCGTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLGWRPV*WNPWRR
Trigger: GCGCCTCCACGGATTCCAGCACACAGGGCGCCAACC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGGGTGCTGCCCTGAATaGCACCCTAGGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTGCCPE*HPRKGG
Trigger: GCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGGGCATGAGTCGGTTTaGTCAGCAGGAGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFGHESV*SAGAPE
Trigger: CTCAGGGGCTCCTGCTGAGCAAACCGACTCATGCCC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGGCTCTTCAGGACTCTaGCCCACACCGGCCCCCACT +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTGSSGL*PTPAPT
Trigger: AGTGGGGGCCGGTGTGGGGCAGAGTCCTGAAGAGCC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGTGGCGGCGCAGCCACTaGACGGATCCTGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEWRRSH*TDPGAV
Trigger: GACAGCTCCAGGATCCGTGCAGTGGCTGCGCCGCCA...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGCACATCAATACCTCATaGCCTGCAGGTCACACAGTG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRHINTS*PAGHTV
Trigger: CACTGTGTGACCTGCAGGGCATGAGGTATTGATGTG...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAATGAAGAGCTTGGCCTaGAGCCACATGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRMKSLA*SHMVGQ
Trigger: CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCAT...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCATAGTTCCGAAAGCTaGAGGCCAGGTGCCGAGAGT +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQHSSES*RPGAES
Trigger: ACTCTCGGCACCTGGCCTCCAGCTTTCGGAACTATG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCATGGCGTTTGTGCTTaGATTTCCTCCTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRHGVCA*ISSSSS
Trigger: CGAAGAAGAGGAGGAAATCCAAGCACAAACGCCATG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTTTGTCCGACTGCTGGTaGGGCTTGTCATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSLSDCW*GLSWSR
Trigger: TCGTGACCATGACAAGCCCCACCAGCAGTCGGACAA...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTGGCTAAAATTACAGTaGTCTCCCCAGGTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKWLKLQ*SPQVQR
Trigger: GCGCTGCACCTGGGGAGACCACTGTAATTTTAGCCA...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACTGCTGCGGGGACAGTaGCTCATGCACCGGCATGGG +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTLLRGQ*LMHRHG
Trigger: CCCATGCCGGTGCATGAGCCACTGTCCCCGCAGCAG...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGCCAGGGCCCATGGGTaGGCCAGGATTCATGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLARAHG*ARIHAR
Trigger: CCTGGCATGAATCCTGGCCCACCCATGGGCCCTGGC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGGCCGCCAGGGCCCATaGGTGGGCCAGGATTCATGC +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICGRQGP*VGQDSC
Trigger: GCATGAATCCTGGCCCACCCATGGGCCCTGGCGGCC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGCATCATTCCAGAATGTaGGGAGTCTCCAGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKHHSRM*GVSRAV
Trigger: TACGGCCCTGGAGACTCCCCACATTCTGGAATGATG...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTTTCCTCCTCCTCCGTTaGGGGCGGCCCAGACCCCTT +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPFLLLR*GRPRPL
Trigger: AAGGGGTCTGGGCCGCCCCCAACGGAGGAGGAGGAA...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCGTCCTGCTTGGGGATaGGTAGGGGGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLRPAWG*VGGSGP
Trigger: AGGACCTGATCCCCCTACCCATCCCCAAGCAGGACG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTATGGCGCCCTGTGTGCTaGAATCCGTGGAGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVWRPVC*NPWRRP
Trigger: CGGGCGCCTCCACGGATTCCAGCACACAGGGCGCCA...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGCACCCGGGGGTCACTaGGTTTGTCGCTGGAACCGG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLAPGGH*VCRWNR
Trigger: CCGGTTCCAGCGACAAACCCAGTGACCCCCGGGTGC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTGTAGGGAGCGGTGGCTaGTGGGGAGGCATCCCCACT +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLVGSGG*WGGIPT
Trigger: AGTGGGGATGCCTCCCCACCAGCCACCGCTCCCTAC...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGGTCGTAGGGAGCGGTaGCTGGTGGGGAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICGRRER*LVGRHP
Trigger: GGGATGCCTCCCCACCAGCCACCGCTCCCTACGACC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGGGCCTTCCCTGTCTCTaGCTGTTCCAGGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQGLPCL*LFQGRL
Trigger: AAGTCTGCCCTGGAACAGCCAGAGACAGGGAAGGCC...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGCCCAGAAAACCCACTaGGCCTCCAGCAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTAQKTH*ASSKAR
Trigger: CCGGGCCTTGCTGGAGGCCCAGTGGGTTTTCTGGGC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGGTTCTAGAAACGCCTaGACCTGCTTCCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRGSRNA*TCFHAG
Trigger: GCCTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACC...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGGGCCCCCACTACCTTTaGGTCCAGTTCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQGPHYL*VQFSLW
Trigger: CCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCC...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGGCATAGCGGGTGCGTaGCTTGAGGACCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFGIAGA*LEDQDR
Trigger: TCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTAAAACAGAGAACACTTaGCCAGGAGCCACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSKTENT*PGATPG
Trigger: CCCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTT...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCCTGCAGCCACATaGTGGGCCAGGGAGACGGGC +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICWPAAT*WARETG
Trigger: GCCCGTCTCCCTGGCCCACCATGTGGCTGCAGGCCA...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCACAGGTTTGCGGGCATaGGTCGGTTTGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFTGLRA*VGLLSR
Trigger: CCTGCTGAGCAAACCGACTCATGCCCGCAAACCTGT...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGCACTGAAAAGACAGTaGTGGTGCACCCTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACALKRQ*WCTLGF
Trigger: GAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACTCTCACTGTCTCCTaGGTGGGTTGTTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQTLTVS*VGCYSL
Trigger: CAGGCTGTAACAACCCACTCAGGAGACAGTGAGAGT...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGATGAGGTTCTTAGGCTaGATATTCCAAGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWMRFLG*IFQEEG
Trigger: GCCCTCCTCTTGGAATATTCAGCCTAAGAACCTCAT...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGGTCCATCTTGGAGTATaGCTTCTTGGGCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQVHLGV*LLGQGR
Trigger: ACGCCCCTGCCCAAGAAGGCATACTCCAAGATGGAC...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTCACCCTGCATGGGCCTaGCGTTGGGAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPHPAWA*RWERLE
Trigger: CTCCAACCTCTCCCAACGGCAGGCCCATGCAGGGTG...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGCCCATCGGCATGTCTaGGTGCATGTCTGCGTGCAT +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFAHRHV*VHVCVH
Trigger: ATGCACGCAGACATGCACGCAGACATGCCGATGGGC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTATGTGGCTGAACTGCTaGAGCTGTGACCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLMWLNC*SCDRGS
Trigger: GGACCCACGGTCACAGCTGCAGCAGTTCAGCCACAT...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGTTGATGTGGCTGAACTaGTGCAGCTGTGACCGTGGG +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQLMWLN*CSCDRG
Trigger: CCCACGGTCACAGCTGCAGCAGTTCAGCCACATCAA...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGATTCCAGAGCACGGTaGGGGCGAAGCTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPDSRAR*GRSWAC
Trigger: GCAAGCCCAGCTTCGCCCGCACCGTGCTCTGGAATC...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAGTTCCCTACCCTGGGTaGTGCCCTGAATGCCACCCT +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTVPYPG*CPECHP
Trigger: AGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAAC...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGAATACTGACAGAACGTaGGTGCTCCTAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQNTDRT*VLLGAA
Trigger: GGCAGCCCCTAGGAGCACGCACGTTCTGTCAGTATT...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTCCCCATCCCCTGGCTaGAGGGTTCCCACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLSPSPG*RVPTQS
Trigger: GGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTCCCCCAGCACCCCTTaGGCCCATCTCTCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICSPSTP*AHLSGC
Trigger: ACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGAGGGAGACGGGCAGATaGAGCCACAAGCACACACTT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQRETGR*SHKHTL
Trigger: AAGTGTGTGCTTGTGGCTGCATCTGCCCGTCTCCCT...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTTTGTCCGACTGCTGGTaGGGCTTGTCATGGTCACGA +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVLSDCW*GLSWSR
Trigger: TCGTGACCATGACAAGCCCCACCAGCAGTCGGACAA...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGGGAGTTCGATGTCATaGCTAAAATTACAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPGSSMS*LKLQWS
Trigger: AGACCACTGTAATTTTAGCCATGACATCGAACTCCC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCTCGGTCAGAGGGTCGTaGGAAAACATGCAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACSVRGS*ENMQSS
Trigger: TGACGACTGCATGTTTTCCCACGACCCTCTGACCGA...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCCATGTCAGGATGCATTaGACCGCCCATTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFHVRMH*TAHWPW
Trigger: CCAGGGCCAATGGGCGGTCCAATGCATCCTGACATG...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAGCCGTAGGGCATCATTaGAGGGCCGCCAGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVAVGHH*RAARAH
Trigger: ATGGGCCCTGGCGGCCCTCCAATGATGCCCTACGGC...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGATAGAAGTTCTGGGCTaGCGGGATAGGGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQIEVLG*RDRGHH
Trigger: ATGATGCCCCCTATCCCGCCAGCCCAGAACTTCTAT...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACTCCCCAGGCTCCCCTaGCAGCTCTTCGTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVLPRLP*QLFVVP
Trigger: GGGCACTACGAAGAGCTGCCAGGGGAGCCTGGGGAG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTAGGGTGCCCGGGGAGTaGGTCCAGGGGAATGTTCAC +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPRVPGE*VQGNVH
Trigger: GTGAACATTCCCCTGGACCCACTCCCCGGGCACCCT...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTAACACCTGCATCTGCTaGCTTGGGAAAGGAAACCCG +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSNTCIC*LGKGNP
Trigger: CGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTT...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGAGGCTCCCCATCCCCTaGCTGCAGGGTTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GNPNTSIPHALQVTQCKERLPIP*LQGSHS
Trigger: TGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCT...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGAAGGGGAATCCCTTaGCAGGTAACTAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGRGIP*QVTRSL
Trigger: AAGAGACCTAGTTACCTGCCAAGGGATTCCCCTTCC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGACACCCTGCCTCCTaGCTCCAAACTATGAGTTTT +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGHPAS*LQTMSF
Trigger: AAAACTCATAGTTTGGAGCCAGGAGGCAGGGTGTCC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCAAGGCCAACACTGGTaGCTGAAGACAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRQGQHW*LKTNLI
Trigger: AATGAGATTTGTCTTCAGCCACCAGTGTTGGCCTTG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCTCTTCGGGCACAGGGTaGGGAGCGTTCAATACCTTC +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFSSGTG*GAFNTF
Trigger: GAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGA...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGCGGCCTGATGGCAAATaGGAATTTCGGGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKRPDGK*EFRVNS
Trigger: TGAATTCACCCGAAATTCTCATTTGCCATCAGGCCG...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTTTAAAAGCTCGGCCTaGTGGCAAATGAGAATTTCG +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRFKSSA*WQMRIS
Trigger: CGAAATTCTCATTTGCCATCAGGCCGAGCTTTTAAA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGAAGCATGGCGTTTGTaGTTGGATTTCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKEAWRL*LDFLLF
Trigger: GAAGAGGAGGAAATCCAAGCACAAACGCCATGCTTC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTGTACTCTCTGTACTTaGGGTGACCTTTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKCTLCT*GDLSHW
Trigger: CCAGTGAGAAAGGTCACCGCAAGTACAGAGAGTACA...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCTCGGCACCTGCTTCTaGATCATCGGCCAACATCTT +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQLGTCF*IIGQHL
Trigger: AAGATGTTGGCCGATGATGCAGAAGCAGGTGCCGAG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTAGGGGGTTGATGCCCTaGTTCTTCAGTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLRGLMP*FFSSST
Trigger: GGTGGAGGAACTGAAGAAGCAGGGCATCAACCCCCT...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGGGCCAGGATTCATaGCAGGGCCCATCGGCATGT +
Preference number: 4 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEVGQDS*QGPSAC
Trigger: ACATGCCGATGGGCCCTGGCATGAATCCTGGCCCAC...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGGGCGAAGCTGGGCTTaGTCAGGGTCACGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPGRSWA*SGSRPS
Trigger: AGAAGGACGTGACCCTGAGCAAGCCCAGCTTCGCCC...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTAACATCCTTCAGGGATaGCGCATCCTGCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLNILQG*RILLTL
Trigger: GAGGGTGAGCAGGATGCGGCATCCCTGAAGGATGTT...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGTGGGTTGTTACAGCCTaGACTGAAAAGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRWVVTA*TEKTVM
Trigger: CATCACTGTCTTTTCAGTGCAGGCTGTAACAACCCA...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCCAATACCTCATGCCCTaGAGGTCACACAGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACQYLMP*RSHSVR
Trigger: CCTTACACTGTGTGACCTGCAGGGCATGAGGTATTG...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCACATCAATACCTCATaGCCTGCAGGTCACACAGTG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQHINTS*PAGHTV
Trigger: CACTGTGTGACCTGCAGGGCATGAGGTATTGATGTG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCAAGGGCTGTGCCCTCTaGTTCAAGGCCAACACTGGT +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFKGCAL*FKANTG
Trigger: ACCAGTGTTGGCCTTGAAGCAGAGGGCACAGCCCTT...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCGCTTCAGTCTCCTGTaGGACTTCTCCTCATCCGAA +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVRFSLL*DFSSSE
Trigger: TTCGGATGAGGAGAAGTCCCACAGGAGACTGAAGCG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGTCGCTAGAAGAAGCATaGCGTTTGTGCTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWSLEEA*RLCLDF
Trigger: GAAATCCAAGCACAAACGCCATGCTTCTTCTAGCGA...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACATGTCAGGATGCATTaGACCGCCCATTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGHVRMH*TAHWPW
Trigger: CCAGGGCCAATGGGCGGTCCAATGCATCCTGACATG...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACATCCTGCTGCTTCTGCTaGATCCTCAGGTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTSCCFC*ILRYRA
Trigger: GGCCCTGTACCTGAGGATCCAGCAGAAGCAGCAGGA...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGCACTGCGTCCTGCTTaGGGATGGGTAGGGGGATCA +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTALRPA*GWVGGS
Trigger: TGATCCCCCTACCCATCCCCAAGCAGGACGCAGTGC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAGGCCTTCCCTGTCTCTaGCTGTTCCAGGGCAGACTT +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGGLPCL*LFQGRL
Trigger: AAGTCTGCCCTGGAACAGCCAGAGACAGGGAAGGCC...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTTCTGAGGCCAGGCACTaGCGAAAGTTCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVSEARH*RKFTGL
Trigger: CAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGA...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGACCAGGACAGACCCTaGTGTGGGCAAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTDQDRP*CGQAGC
Trigger: ACACCCTGCTTGCCCACACCAGGGTCTGTCCTGGTC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCAGAGCAACACACCTTaGAACACCTGCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQQSNTP*NTCICW
Trigger: CCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGGACACCCTGCCTCCTaGCTCCAAACTATGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACGHPAS*LQTMSF
Trigger: AAAACTCATAGTTTGGAGCCAGGAGGCAGGGTGTCC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCTGAGCCCGCCACACTaGCCAGAACTTAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLLSPPH*PELKMV
Trigger: AACCATCTTAAGTTCTGGTCAGTGTGGCGGGCTCAG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGAGCCCACAGAGTCTaGGGCCAGGCACTGGCGAAA +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVRAHRV*GQALAK
Trigger: TTTCGCCAGTGCCTGGCCTCAGACTCTGTGGGCTCT...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCGCACTGAAAAGACAGTaGTGGTGCACCCTAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFALKRQ*WCTLGF
Trigger: GAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGC...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTACTCTCACTGTCTCCTaGGTGGGTTGTTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLTLTVS*VGCYSL
Trigger: CAGGCTGTAACAACCCACTCAGGAGACAGTGAGAGT...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTATGAGGTTCTTAGGCTaGATATTCCAAGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSMRFLG*IFQEEG
Trigger: GCCCTCCTCTTGGAATATTCAGCCTAAGAACCTCAT...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACGGGCTCCATCTCCATaGCCTCCTGCTGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVRAPSP*PPAAGR
Trigger: TCTACCAGCAGCAGGAGGGCATGGAGATGGAGCCCG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCGGCTGGACGTCTGCTaGCTCAAGGTCTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLRLDVC*LKVFRM
Trigger: CATCCTGAAGACCTTGAGGCAGCAGACGTCCAGCCG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACATTGATGTGGCTGAACTaGTGCAGCTGTGACCGTGGG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTLMWLN*CSCDRG
Trigger: CCCACGGTCACAGCTGCAGCAGTTCAGCCACATCAA...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAAACATCCTTCAGGGATaGCGCATCCTGCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGNILQG*RILLTL
Trigger: GAGGGTGAGCAGGATGCGGCATCCCTGAAGGATGTT...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAAGGGAGACGGGCAGATaGAGCCACAAGCACACACTT +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGRETGR*SHKHTL
Trigger: AAGTGTGTGCTTGTGGCTGCATCTGCCCGTCTCCCT...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCAAAAACCACAACACTaGCACACTGTGTATTCATAC +
Preference number: 4 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRQKPQH*HTVYSY
Trigger: GTATGAATACACAGTGTGGCAGTGTTGTGGTTTTTG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCTCTTGCTGTCCATCTTaGAGTATGCCTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GCGPPDRTGGVILTERACSCCPS*SMPSWA
Trigger: TGCCCAAGAAGGCATACTCCAAGATGGACAGCAAGA...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCCATTGGACCGCCCATTaGCCCTGGGGGTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICHWTAH*PWGSHV
Trigger: AACATGGGACCCCCAGGGCCAATGGGCGGTCCAATG...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCATCATTCCAGAATGTaGGGAGTCTCCAGGGCCGTA +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLHHSRM*GVSRAV
Trigger: TACGGCCCTGGAGACTCCCCACATTCTGGAATGATG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTTGTTGTATCTGTCCGTaGGGGTGCCCCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPCCICP*GCPHQH
Trigger: GTGCTGATGGGGGCACCCCCACGGACAGATACAACA...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACATGTTGTATCTGTCCGTaGGGGTGCCCCCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTCCICP*GCPHQH
Trigger: GTGCTGATGGGGGCACCCCCACGGACAGATACAACA...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGGCCCCCACTACCTTTaGGTCCAGTTCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPGPHYL*VQFSLW
Trigger: CCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCC...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTCTCTGTACTTGCGGTaGCCTTTCTCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLSLYLR*PFSLGL
Trigger: CAGCCCCAGTGAGAAAGGTCACCGCAAGTACAGAGA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR TCA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTCGAAGTACTTGCAAATaGCTTTGCCTTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSRSTCK*LCLSCP
Trigger: CGGACAAGAAAGGCAAAGTCATTTGCAAGTACTTCG...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGATCTTCAGGATGGAGGTaGCACTGCTTCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGSSGWR*HCFHPH
Trigger: ATGAGGGTGGAAGCAGTGTCACCTCCATCCTGAAGA...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAATCATCCCTCCTCGGCTaGCACCTCGGCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKSSLLG*HLGLGP
Trigger: GGGGCCGAGGCCGAGGTGGCAGCCGAGGAGGGATGA...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGCTCATCCTCGGCACCTaGTTCTGCATCATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: GNPNTSIPHALQVTQCKELILGT*FCIIGQ
Trigger: TTGGCCGATGATGCAGAAGCAGGTGCCGAGGATGAG...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTCTCATCCTCGGCACCTaGTTCTGCATCATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPLILGT*FCIIGQ
Trigger: TTGGCCGATGATGCAGAAGCAGGTGCCGAGGATGAG...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTAGGGGGTTGATGCCCTaGTTCTTCAGTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLRGLMP*FFSSST
Trigger: GGTGGAGGAACTGAAGAAGCAGGGCATCAACCCCCT...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTTGTTGTACATGTCCTaGTGCTGCAGCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLLLYMS*CCSCCG
Trigger: CCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTCTGCGTGCATGTCTaGGTGCATGTCAGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEVCVHV*VHVRVH
Trigger: ATGCACCCTGACATGCACGCAGACATGCACGCAGAC...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTTCCTCCTGCTGCTTCTaGTGGATCCTCAGGTACAGG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLSSCCF*WILRYR
Trigger: CCTGTACCTGAGGATCCAGCAGAAGCAGCAGGAGGA...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGAATACTGACAGAACGTaGGTGCTCCTAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GNPNTSIPHALQVTQCKENTDRT*VLLGAA
Trigger: GGCAGCCCCTAGGAGCACGCACGTTCTGTCAGTATT...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCACAGTGTAAGGAGGTaGGAGGAAAACAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: TVMVHPRVLETPGPASTQHSVRR*EENREH
Trigger: GTGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGCACAGTGTAAGGAGGTaGGAGGAAAACAGAGAACAC +
Preference number: 4 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQHSVRR*EENREH
Trigger: GTGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTG...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCATGAAGAGCTTGGCCTaGAGCCACATGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICMKSLA*SHMVGQ
Trigger: CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCAT...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTAAGGGCTGTGCCCTCTaGTTCAAGGCCAACACTGGT +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLKGCAL*FKANTG
Trigger: ACCAGTGTTGGCCTTGAAGCAGAGGGCACAGCCCTT...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAAAACACCAAGGGCTGTaGCCTCTGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTKHQGL*PLLQGQ
Trigger: TTGGCCTTGAAGCAGAGGGCACAGCCCTTGGTGTTT...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCAGTTCCCAGTGGTGTaGTACAGCTTACACGGGAAA +
Preference number: 4 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLQFPVV*YSLHGK
Trigger: TTTCCCGTGTAAGCTGTACCACACCACTGGGAACTG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAGGGGGCCACCCTGCATaGGCCTGCCGTTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKGGHPA*ACRWER
Trigger: CCTCTCCCAACGGCAGGCCCATGCAGGGTGGCCCCC...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAATAGAAGTTCTGGGCTaGCGGGATAGGGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGIEVLG*RDRGHH
Trigger: ATGATGCCCCCTATCCCGCCAGCCCAGAACTTCTAT...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAACTTCGGGCTTGGAGGTaGGCAGGGCGCGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKLRAWR*AGREPA
Trigger: GGCTGGCTCGCGCCCTGCCCACCTCCAAGCCCGAAG...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACAAAGTCGGGGAGGTTaGCGCCCTGTGTGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVQSRGG*RPVCWN
Trigger: ATTCCAGCACACAGGGCGCCAACCTCCCCGACTTTG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACATCTTCAGGATGGAGGTaGCACTGCTTCCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTSSGWR*HCFHPH
Trigger: ATGAGGGTGGAAGCAGTGTCACCTCCATCCTGAAGA...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTCTGAGCCCGCCACACTaGCCAGAACTTAAGATGGTT +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPLSPPH*PELKMV
Trigger: AACCATCTTAAGTTCTGGTCAGTGTGGCGGGCTCAG...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCCGTCATAGTCCTCCTTaGCCATGTCCTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICRHSPP*PCPPPR
Trigger: ACGAGGAGGAGGACATGGGCAAGGAGGACTATGACG...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCAAAGGGGCCATGCTTTaGCCAGAAAACCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICKGAML*PENPLG
Trigger: GCCCAGTGGGTTTTCTGGGCAAAGCATGGCCCCTTT...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAAAGGGGCCATGCTTTaGCCAGAAAACCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVKGAML*PENPLG
Trigger: GCCCAGTGGGTTTTCTGGGCAAAGCATGGCCCCTTT...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTAAACACCAAGGGCTGTaGCCTCTGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPKHQGL*PLLQGQ
Trigger: TTGGCCTTGAAGCAGAGGGCACAGCCCTTGGTGTTT...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACATTGGCACGCCGGTACTaGTTCAGCTCTTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTLARRY*FSSLVK
Trigger: CTTCACCAAAGAGCTGAACCAGTACCGGCGTGCCAA...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAGCTCATGCACCGGCATaGGCATCTGAGGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKAHAPA*ASEGAR
Trigger: CCGGGCCCCCTCAGATGCCCATGCCGGTGCATGAGC...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAACCGCCCATTGGCCCTaGGGGTCCCATGTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKTAHWP*GSHVGP
Trigger: GGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGT...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAACGTCCTTCTTGATGTaGCTGAACTGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGTSFLM*LNCCSC
Trigger: ACAGCTGCAGCAGTTCAGCCACATCAAGAAGGACGT...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTTCTGAGGCCAGGCACTaGCGAAAGTTCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPSEARH*RKFTGL
Trigger: CAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGA...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTAACACCTGCATCTGCTaGCTTGGGAAAGGAAACCCG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLNTCIC*LGKGNP
Trigger: CGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTT...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAATGAGAATTTCGGGTaGATTCATAGTCCTATGAGG +
Preference number: 4 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQNENFG*IHSPMR
Trigger: CCTCATAGGACTATGAATTCACCCGAAATTCTCATT...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACGTAGTCCTCGTACATaGCATAACTCTTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGRSPRT*HNSCCP
Trigger: TGGACAGCAAGAGTTATGGCATGTACGAGGACTACG...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAACAGACCCCTTGGAACTaGTGGGGCCCACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKQTPWN*WGPQGW
Trigger: CCAGCCCTGTGGGCCCCAGCAGTTCCAAGGGGTCTG...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAATGTCCGGGGCTGGGCTaGAGTGCAGGCATAGCGGGT +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKCPGLG*SAGIAG
Trigger: ACCCGCTATGCCTGCACTGCAGCCCAGCCCCGGACA...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCAATACCTCATGCCCTaGAGGTCACACAGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLQYLMP*RSHSVR
Trigger: CCTTACACTGTGTGACCTGCAGGGCATGAGGTATTG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAGGGCGTGGCATGCGATaGGGGGTACTGCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKGRGMR*GVLLVG
Trigger: TCCCACCAGCAGTACCCCCCATCGCATGCCACGCCC...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAGGACAGACCCTGGTGTaGGCAAGCAGGGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKGQTLV*ASRVWP
Trigger: GGGCCACACCCTGCTTGCCCACACCAGGGTCTGTCC...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGGAAGGGGAATCCCTTaGCAGGTAACTAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTGRGIP*QVTRSL
Trigger: AAGAGACCTAGTTACCTGCCAAGGGATTCCCCTTCC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACACGAAGTACTTGCAAATaGCTTTGCCTTTCTTGTCCG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTRSTCK*LCLSCP
Trigger: CGGACAAGAAAGGCAAAGTCATTTGCAAGTACTTCG...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCGGCCTGATGGCAAATaGGAATTTCGGGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLRPDGK*EFRVNS
Trigger: TGAATTCACCCGAAATTCTCATTTGCCATCAGGCCG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAATGCTGCTGCAGCTGCTaGGGGGACAGTGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKCCCSC*GDSGSC
Trigger: GCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCA...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTTCTCGCTTCTTTaGGAGTTCGATGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTQFSLL*EFDVMA
Trigger: AGCCATGACATCGAACTCCCAAAGAAGCGAGAACTG...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAGCCCTGCCATGGTCTTaGTTCCGGGTCTCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKALPWS*FRVSSG
Trigger: GCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGC...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTCACTGTCTCCTGAGTaGGTTGTTACAGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICSLSPE*VVTACT
Trigger: AGTGCAGGCTGTAACAACCCACTCAGGAGACAGTGA...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACTTCAAGGCCAACACTaGTGGCTGAAGACAAATCTC +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTLQGQH*WLKTNL
Trigger: GAGATTTGTCTTCAGCCACCAGTGTTGGCCTTGAAG...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTCTTCAAGGCCAACACTaGTGGCTGAAGACAAATCTC +
Preference number: 4 (lower is better)
Translates to: LHLLAWERKPEHINTSCPLQGQH*WLKTNL
Trigger: GAGATTTGTCTTCAGCCACCAGTGTTGGCCTTGAAG...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
3UTR CAA 72 bp AGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTaGGGAAAGGAAACCCGAACACATCAATACCTCATG +
Preference number: 4 (lower is better)
Translates to: RATHLGTPASAG*GKETRTHQYLM
Trigger: CATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGATTTAAAAGCTCGGCCTaGTGGCAAATGAGAATTTCG +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGFKSSA*WQMRIS
Trigger: CGAAATTCTCATTTGCCATCAGGCCGAGCTTTTAAA...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAAGTATAAAAAGGGTGTaGAATAGTCATGCGGCGATC +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTSIKRV*NSHAAI
Trigger: GATCGCCGCATGACTATTTCACACCCTTTTTATACT...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAAGTATAAAAAGGGTGTaGAATAGTCATGCGGCGATC +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGSIKRV*NSHAAI
Trigger: GATCGCCGCATGACTATTTCACACCCTTTTTATACT...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCCAGTTCTCGCTTCTTTaGGAGTTCGATGTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICQFSLL*EFDVMA
Trigger: AGCCATGACATCGAACTCCCAAAGAAGCGAGAACTG...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAACATTGGACCGCCCATTaGCCCTGGGGGTCCCATGTT +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKHWTAH*PWGSHV
Trigger: AACATGGGACCCCCAGGGCCAATGGGCGGTCCAATG...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGCAAGGCCAACACTGGTaGCTGAAGACAAATCTCATT +
Preference number: 4 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEQGQHW*LKTNLI
Trigger: AATGAGATTTGTCTTCAGCCACCAGTGTTGGCCTTG...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR TCA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACAAATGAGAATTTCGGGTaGATTCATAGTCCTATGAGG +
Preference number: 4 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTNENFG*IHSPMR
Trigger: CCTCATAGGACTATGAATTCACCCGAAATTCTCATT...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAATTGTACATGTCCTGCTaGTGCAGCTGCTGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKLYMSC*CSCCGD
Trigger: GTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAA...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCATTATATACATATTTaGACCACCAACTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: SLRPGTGESSQVCGHESVHYIHI*TTNSQL
Trigger: GAGTTGAGAGTTGGTGGTGCAAATATGTATATAATG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CCA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGGGAGTTCGATGTCATaGCTAAAATTACAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTGSSMS*LKLQWS
Trigger: AGACCACTGTAATTTTAGCCATGACATCGAACTCCC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAACATGCCATAACTCTTaGTGTCCATCTTGGAGTATG +
Preference number: 4 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVTCHNS*CPSWSM
Trigger: CATACTCCAAGATGGACAGCAAGAGTTATGGCATGT...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR GCA 90 bp TGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGCTTCAAAAACCACAACACTaGCACACTGTGTATTCATAC +
Preference number: 4 (lower is better)
Translates to: CPQIPQSNTPWNTCICWLQKPQH*HTVYSY
Trigger: GTATGAATACACAGTGTGGCAGTGTTGTGGTTTTTG...AAGCCAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR GCA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACATTATATACATATTTaGACCACCAACTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGHYIHI*TTNSQL
Trigger: GAGTTGAGAGTTGGTGGTGCAAATATGTATATAATG...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp CCTGTGTGCTGGAATCCGTGGAGGCGCCCGGGCGCTGCCGGGCGTTaGGGGGCCCTGCCGTGGCAGCGCGGTGCAGCCGGGGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PVCWNPWRRPGAAGR*GALPWQRGAAGGPG
Trigger: CCCTGGACCCCCGGCTGCACCGCGCTGCCACGGCAGGGCCCCCCAACGCCCGGCAGCGCCCGGGCGCCTCCACGGATTCCAGCACACAGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CCA 90 bp TCCACCGGCCGCCAGCACGCGGGGGTCGTAGGGAGCGGTGGCTGGTaGGGAGGCATCCCCACTCGGGCTGGCGGTGGGAGAGGGCGCCTC +
Preference number: 5 (lower is better)
Translates to: STGRQHAGVVGSGGW*GGIPTRAGGGRGRL
Trigger: GAGGCGCCCTCTCCCACCGCCAGCCCGAGTGGGGATGCCTCCCCACCAGCCACCGCTCCCTACGACCCCCGCGTGCTGGCGGCCGGTGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS GCA 90 bp CCGGGCTTGGCAGCCCGGGAGGAGGCCGTAGAGTCTGTGGGTTTCTaGAGCCGAGGGTCGGTGGGGGCCTTCCGCACCCGGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: PGLAAREEAVESVGF*SRGSVGAFRTRGSL
Trigger: CAGTGACCCCCGGGTGCGGAAGGCCCCCACCGACCCTCGGCTGCAGAAACCCACAGACTCTACGGCCTCCTCCCGGGCTGCCAAGCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS TCA 90 bp GGCGGCCCAGACCCCTTGGAACTGCTGGGGCCCACAGGGCTGGAATaGAGGCTGCCTTCGGGCTTGGAGGTGGGCAGGGCGCGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GGPDPLELLGPTGLE*RLPSGLEVGRARAS
Trigger: GCTGGCTCGCGCCCTGCCCACCTCCAAGCCCGAAGGCAGCCTTCATTCCAGCCCTGTGGGCCCCAGCAGTTCCAAGGGGTCTGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GGCCTCGGCCCCGACCCATTCCTTTCCCTCGACCTCGGGAGCCCCTaGCACGGCCTCGACTTAGCCCTCGGCCTCGGCTGTCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: GLGPDPFLSLDLGSP*HGLDLALGLGCPWS
Trigger: GCTCCAAGGACAGCCGAGGCCGAGGGCTAAGTCGAGGCCGTGGCAGGGGCTCCCGAGGTCGAGGGAAAGGAATGGGTCGGGGCCGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp GGGCAGGGCGCGAGCCAGCCGAGGATCGGAGGGTCCCGAATCACCTaGGCCAGACCCGCCAGAAGCCTCCACATGGCGGGTGAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: GQGASQPRIGGSRIT*ARPARSLHMAGESG
Trigger: CCCAGACTCACCCGCCATGTGGAGGCTTCTGGCGGGTCTGGCCCAGGTGATTCGGGACCCTCCGATCCTCGGCTGGCTCGCGCCCTGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GTCCTCGGCCCCGACCCATTCCTTTCCCTCGACCTCGGGAGCCCCTaGCACGGCCTCGACTTAGCCCTCGGCCTCGGCTGTCCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: VLGPDPFLSLDLGSP*HGLDLALGLGCPWS
Trigger: GCTCCAAGGACAGCCGAGGCCGAGGGCTAAGTCGAGGCCGTGGCAGGGGCTCCCGAGGTCGAGGGAAAGGAATGGGTCGGGGCCGAGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594019.5
CDS CCA 90 bp ACCGCCCATTGGCCCTGGGGGTCCCATGTTGGGCCCAGGGCCCATTaGCCCTGGGGGTCCACCGGGTCCAGGGAACCTCACACCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TAHWPWGSHVGPRAH*PWGSTGSREPHTQL
Trigger: AAGCTGGGTGTGAGGTTCCCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp GAGGGTCCCGAATCACCTGGGCCAGACCCGCCAGAAGCCTCCACATaGCGGGTGAGTCTGGGGTCCCGGCTGAGGCGAGGGTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: EGPESPGPDPPEAST*RVSLGSRLRRGSAS
Trigger: GCTGGCTGACCCTCGCCTCAGCCGGGACCCCAGACTCACCCGCCATGTGGAGGCTTCTGGCGGGTCTGGCCCAGGTGATTCGGGACCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCGAGGAGGCGAAGGCGTaGATGGCGGCGGCGGCGATG +
Preference number: 5 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASEEAKA*MAAAAM
Trigger: CATCGCCGCCGCCGCCATCAACGCCTTCGCCTCCTC...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCCCTGGGGGTCCCATGTaGGGCCCAGGGCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASPGGPM*GPGPIG
Trigger: GCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGG...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS TCA 90 bp CTCCTGCTGCTTCTGCTGGATCCTCAGGTACAGGGCCCTCTGGGCTaGGGGCAGGAAGTCAGGGACACCGGCGCCTGGCTTCGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LLLLLLDPQVQGPLG*GQEVRDTGAWLRPA
Trigger: GGCCGGCCGAAGCCAGGCGCCGGTGTCCCTGACTTCCTGCCCTCAGCCCAGAGGGCCCTGTACCTGAGGATCCAGCAGAAGCAGCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 90 bp GGATGCGAGACAGAAGTTCAAAGTCGGGGAGGTTGGCGCCCTGTGTaGTGGAATCCGTGGAGGCGCCCGGGCGCTGCCGGGCGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GCETEVQSRGGWRPV*WNPWRRPGAAGRWG
Trigger: CCCCCAACGCCCGGCAGCGCCCGGGCGCCTCCACGGATTCCAGCACACAGGGCGCCAACCTCCCCGACTTTGAACTTCTGTCTCGCATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CCA 90 bp TGTCAGGATGCATTGGACCGCCCATTGGCCCTGGGGGTCCCATGTTaGGCCCAGGGCCCATTGGCCCTGGGGGTCCACCGGGTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: CQDALDRPLALGVPC*AQGPLALGVHRVQG
Trigger: TCCCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCCGGCCTCGGCTGTCCTaGGAGCGGCGGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASRPRLS*ERRYWF
Trigger: GAACCAGTACCGCCGCTCCAAGGACAGCCGAGGCCG...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp CAGACCCCTTGGAACTGCTGGGGCCCACAGGGCTGGAATGAAGGCTaGCTTCGGGCTTGGAGGTGGGCAGGGCGCGAGCCAGCCGAGGAT +
Preference number: 5 (lower is better)
Translates to: QTPWNCWGPQGWNEG*LRAWRWAGREPAED
Trigger: ATCCTCGGCTGGCTCGCGCCCTGCCCACCTCCAAGCCCGAAGGCAGCCTTCATTCCAGCCCTGTGGGCCCCAGCAGTTCCAAGGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp CGGGTGCATGTCGGGGTGCATGTCAGGATGCATTGGACCGCCCATTaGCCCTGGGGGTCCCATGTTGGGCCCAGGGCCCATTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RVHVGVHVRMHWTAH*PWGSHVGPRAHWPW
Trigger: CCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCTGCATGGGCCTGCCGTaGGGAGAGGTTGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASCMGLP*GEVGAC
Trigger: GCAGGCTCCAACCTCTCCCAACGGCAGGCCCATGCA...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTGGGCCCAGGGCCCATaGGCCCTGGGGGTCCACCGG +
Preference number: 5 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKWAQGP*ALGVHR
Trigger: CCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCA...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCTGTTCCAGGGCAGACTaGCGGACGAACGGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASCSRAD*RTNGGS
Trigger: GGAGCCCCCGTTCGTCCGCAAGTCTGCCCTGGAACA...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp ATGTGGCTGAACTGCTGCAGCTGTGACCGTGGGTCCCGCAGAGGGTaGCCGGGGAGTGGGTCCAGGGGAATGTTCACGGCCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: MWLNCCSCDRGSRRG*PGSGSRGMFTAFSR
Trigger: GCGGGAGAAGGCCGTGAACATTCCCCTGGACCCACTCCCCGGGCACCCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTTCAGCCACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp AGGGTGCATGTCCGGGTGCATGTCGGGGTGCATGTCAGGATGCATTaGACCGCCCATTGGCCCTGGGGGTCCCATGTTGGGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RVHVRVHVGVHVRMH*TAHWPWGSHVGPRA
Trigger: GGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCACCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp AGTCTCCAGGGCCGTAGGGCATCATTGGAGGGCCGCCAGGGCCCATaGGTGGGCCAGGATTCATGCCAGGGCCCATCGGCATGTCTGCGT +
Preference number: 5 (lower is better)
Translates to: SLQGRRASLEGRQGP*VGQDSCQGPSACLR
Trigger: ACGCAGACATGCCGATGGGCCCTGGCATGAATCCTGGCCCACCCATGGGCCCTGGCGGCCCTCCAATGATGCCCTACGGCCCTGGAGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp CGCGGGCCGGACTGTTCCCAGCAAATGGGCTTCCTGAGCCCGTCTTaGGTGTCTGCTTCACCGTCCCGAAGAGGGTGGGCACGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: RGPDCSQQMGFLSPS*VSASPSRRGWARAG
Trigger: ACCTGCCCGTGCCCACCCTCTTCGGGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCTGGGAACAGTCCGGCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS-3UTR CAA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGTGCCGTTGGGAGAGGTaGGAGCCTGCGGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWCRWER*EPAGQG
Trigger: CCCCTGGCCCGCAGGCTCCAACCTCTCCCAACGGCA...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGGGGGCTCCTTAGCCTaGGAGGCCGAGCTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPGGSLA*EAELLP
Trigger: TGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGCTCCCCCAGCACCCCTaGCGCCCATCTCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWLPQHP*RPSLGL
Trigger: CAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGAG...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS TCA 90 bp CTGCTCACCCTCGCGGGCCGGACTGTTCCCAGCAAATGGGCTTCCTaGGCCCGTCTTGGGTGTCTGCTTCACCGTCCCGAAGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LLTLAGRTVPSKWAS*ARLGCLLHRPEEGG
Trigger: CCCACCCTCTTCGGGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCTGGGAACAGTCCGGCCCGCGAGGGTGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS GCA 90 bp CTGGGCTTGCTCAGGGTCACGTCCTTCTTGATGTGGCTGAACTGCTaGAGCTGTGACCGTGGGTCCCGCAGAGGGTGCCCGGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: LGLLRVTSFLMWLNC*SCDRGSRRGCPGSG
Trigger: CCCACTCCCCGGGCACCCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTTCAGCCACATCAAGAAGGACGTGACCCTGAGCAAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp CCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTaGAGCCGCAGCTCTGGCTGGACACTACTGGCAAAAGGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PYPGCCPECHPRKGG*SRSSGWTLLAKGGG
Trigger: GCCTCCCCCTTTTGCCAGTAGTGTCCAGCCAGAGCTGCGGCTCCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS-3UTR CAA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGCCGTAGGGCATCATaGGAGGGCCGCCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGRRAS*EGRQGP
Trigger: TGGGCCCTGGCGGCCCTCCAATGATGCCCTACGGCC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGCGGGCGAAGCTGGGCTaGCTCAGGGTCACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRRAKLG*LRVTSF
Trigger: GAAGGACGTGACCCTGAGCAAGCCCAGCTTCGCCCG...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTTGCCCTCAGCACCCTaGGGCTGGGCACCCGTGTCA +
Preference number: 5 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRLPSAP*GWAPVS
Trigger: TGACACGGGTGCCCAGCCCAAGGGTGCTGAGGGCAA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGTGGGCACGGGCAGGTaGTGCACCCCGGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GCGPPDRTGGVILTERACVGTGR*CTPGWG
Trigger: ACCCCAGCCCGGGGTGCACAACCTGCCCGTGCCCAC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GCATCATTGGAGGGCCGCCAGGGCCCATGGGTGGGCCAGGATTCATaGCAGGGCCCATCGGCATGTCTGCGTGCATGTCTGCGTGCATGT +
Preference number: 5 (lower is better)
Translates to: ASLEGRQGPWVGQDS*QGPSACLRACLRAC
Trigger: ACATGCACGCAGACATGCACGCAGACATGCCGATGGGCCCTGGCATGAATCCTGGCCCACCCATGGGCCCTGGCGGCCCTCCAATGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp TTGCTGCTCTCAGCCAGCCTCCTCGCTCTCTCCTCCTCCTCCTGCTaGTTCTGCTGGATCCTCAGGTACAGGGCCCTCTGGGCTGAGGGC +
Preference number: 5 (lower is better)
Translates to: LLLSASLLALSSSSC*FCWILRYRALWAEG
Trigger: GCCCTCAGCCCAGAGGGCCCTGTACCTGAGGATCCAGCAGAAGCAGCAGGAGGAGGAGGAGAGAGCGAGGAGGCTGGCTGAGAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp CAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGTTGCCGTTGGGAGAGGTaGGAGCCTGCGGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: QRLPIPWLQGSHSVRFLSCRWER*EPAGQG
Trigger: CCCCTGGCCCGCAGGCTCCAACCTCTCCCAACGGCA...ACTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGTGCATGGGCCTGCCGTaGGGAGAGGTTGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWCMGLP*GEVGAC
Trigger: GCAGGCTCCAACCTCTCCCAACGGCAGGCCCATGCA...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCCTTCCTCCTCCTCCGTaGGGGGCGGCCCAGACCCCT +
Preference number: 5 (lower is better)
Translates to: GCGPPDRTGGVILTERACLPPPP*GAAQTP
Trigger: AGGGGTCTGGGCCGCCCCCAACGGAGGAGGAGGAAG...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCAGGGTGGGCATGGATaGCAGGGCCGCGGGCACGGG +
Preference number: 5 (lower is better)
Translates to: SLRPGTGESSQVCGHESVQGGHG*QGRGHG
Trigger: CCCGTGCCCGCGGCCCTGCAATCCATGCCCACCCTG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCCGGGGGTCACTGGGTTaGTCGCTGGAACCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: GCGPPDRTGGVILTERACRGSLG*SLEPGA
Trigger: CGCCCCCGGTTCCAGCGACAAACCCAGTGACCCCCG...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGGCCGAGCTCTTGCCATaGCCCTCAGCACCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRAELLP*PSAPLG
Trigger: GCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGC...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTTGGAGGCCGAGCTCTaGCCATTGCCCTCAGCACCC +
Preference number: 5 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRLEAEL*PLPSAP
Trigger: GGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGGTGGGCACGGGCAGGTaGTGCACCCCGGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TVMVHPRVLETPGPASTQVGTGR*CTPGWG
Trigger: ACCCCAGCCCGGGGTGCACAACCTGCCCGTGCCCAC...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACCAGGGTCCCCATTGTaGGGGCCTGGCGGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRPGSPL*GPGGAA
Trigger: GGCTGCGCCGCCAGGCCCCAACAATGGGGACCCTGG...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp ATGTCAGGGTGCATGTCCGGGTGCATGTCGGGGTGCATGTCAGGATaGATTGGACCGCCCATTGGCCCTGGGGGTCCCATGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: MSGCMSGCMSGCMSG*IGPPIGPGGPMLGP
Trigger: TGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCACCCTGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp ATGTCTGCGTGCATGTCAGGGTGCATGTCCGGGTGCATGTCGGGGTaGATGTCAGGATGCATTGGACCGCCCATTGGCCCTGGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: MSACMSGCMSGCMSG*MSGCIGPPIGPGGP
Trigger: GGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCACCCTGACATGCACGCAGACAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GCCCATGGGTGGGCCAGGATTCATGCCAGGGCCCATCGGCATGTCTaGGTGCATGTCTGCGTGCATGTCAGGGTGCATGTCCGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: AHGWARIHARAHRHV*VHVCVHVRVHVRVH
Trigger: ATGCACCCGGACATGCACCCTGACATGCACGCAGACATGCACGCAGACATGCCGATGGGCCCTGGCATGAATCCTGGCCCACCCATGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp TGCTTGCTGCTCTCAGCCAGCCTCCTCGCTCTCTCCTCCTCCTCCTaGTGCTTCTGCTGGATCCTCAGGTACAGGGCCCTCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: CLLLSASLLALSSSS*CFCWILRYRALWAE
Trigger: CTCAGCCCAGAGGGCCCTGTACCTGAGGATCCAGCAGAAGCAGCAGGAGGAGGAGGAGAGAGCGAGGAGGCTGGCTGAGAGCAGCAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 90 bp CTGCTGCTCAGCTCCCCAACTGAAGCCGGGGGTCGGCTGGACGTCTaGTGCCTCAAGGTCTTCAGGATGGAGGTGACACTGCTTCCACCC +
Preference number: 5 (lower is better)
Translates to: LLLSSPTEAGGRLDV*CLKVFRMEVTLLPP
Trigger: GGGTGGAAGCAGTGTCACCTCCATCCTGAAGACCTTGAGGCAGCAGACGTCCAGCCGACCCCCGGCTTCAGTTGGGGAGCTGAGCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp AAGCTGGGCTTGCTCAGGGTCACGTCCTTCTTGATGTGGCTGAACTaGTGCAGCTGTGACCGTGGGTCCCGCAGAGGGTGCCCGGGGAGT +
Preference number: 5 (lower is better)
Translates to: KLGLLRVTSFLMWLN*CSCDRGSRRGCPGS
Trigger: ACTCCCCGGGCACCCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTTCAGCCACATCAAGAAGGACGTGACCCTGAGCAAGCCCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GGACTGTTCCCAGCAAATGGGCTTCCTGAGCCCGTCTTGGGTGTCTaGTTCACCGTCCCGAAGAGGGTGGGCACGGGCAGGTTGTGCACC +
Preference number: 5 (lower is better)
Translates to: GLFPANGLPEPVLGV*FTVPKRVGTGRLCT
Trigger: GGTGCACAACCTGCCCGTGCCCACCCTCTTCGGGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCTGGGAACAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS-3UTR CAA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGGTTTGGGCAGGGGGTaGATGCCCTGCTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPGLGRG*MPCFFS
Trigger: ACTGAAGAAGCAGGGCATCAACCCCCTGCCCAAACC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCACACCAGGGGGCGGTTaGGGCAGGGGGTTGATGCCC +
Preference number: 5 (lower is better)
Translates to: GCGPPDRTGGVILTERACTPGGG*GRGLMP
Trigger: GGGCATCAACCCCCTGCCCAAACCGCCCCCTGGTGT...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCAGGGTGGGCATGGATaGCAGGGCCGCGGGCACGGG +
Preference number: 5 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLQGGHG*QGRGHG
Trigger: CCCGTGCCCGCGGCCCTGCAATCCATGCCCACCCTG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGAGGAGCCGGTGGCATaGACTGTCTTGAGGATGCGA +
Preference number: 5 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPEEPVA*TVLRMR
Trigger: TCGCATCCTCAAGACAGTCAATGCCACCGGCTCCTC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ACTCTGCCCCACACCGGCCCCCACTACCTTTGGGTCCAGTTCTCACTGTGGAGGTTGGAGGCCGAGCTCTaGCCATTGCCCTCAGCACCC +
Preference number: 5 (lower is better)
Translates to: TLPHTGPHYLWVQFSLWRLEAEL*PLPSAP
Trigger: GGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAA...CCTCCACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCGGTGTGGGGCAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGCCCTGCCATGGTCTaGGTTCCGGGTCTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGPAMV*VPGLFG
Trigger: CCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TCCCCCAGCACCCCTTGCGCCCATCTCTCGGGCTGTGTCCATAGGTGGGCCTCCCCTGCATCTGCTGGCTaGGGAAAGGAAACCCGAACA +
Preference number: 5 (lower is better)
Translates to: SPSTPCAHLSGCVHRWASPASAG*GKETRT
Trigger: TGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGG...GGAGGCCCACCTATGGACACAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp AGTCTTCGTCATCGTTCATTCCGCCCTTGTTCATCCCTCCTCGGCTaGCACCTCGGCCTCGGCCCCGACCCATTCCTTTCCCTCGACCTC +
Preference number: 5 (lower is better)
Translates to: SLRHRSFRPCSSLLG*HLGLGPDPFLSLDL
Trigger: GAGGTCGAGGGAAAGGAATGGGTCGGGGCCGAGGCCGAGGTGGCAGCCGAGGAGGGATGAACAAGGGCGGAATGAACGATGACGAAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp CTGCTCAGCTCCCCAACTGAAGCCGGGGGTCGGCTGGACGTCTGCTaGCTCAAGGTCTTCAGGATGGAGGTGACACTGCTTCCACCCTCA +
Preference number: 5 (lower is better)
Translates to: LLSSPTEAGGRLDVC*LKVFRMEVTLLPPS
Trigger: TGAGGGTGGAAGCAGTGTCACCTCCATCCTGAAGACCTTGAGGCAGCAGACGTCCAGCCGACCCCCGGCTTCAGTTGGGGAGCTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGCGGCCTCGGCTGTCCTaGGAGCGGCGGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQRPRLS*ERRYWF
Trigger: GAACCAGTACCGCCGCTCCAAGGACAGCCGAGGCCG...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTCGTTCATTCCGCCCTaGTTCATCCCTCCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRSFIPP*FIPPRL
Trigger: CAGCCGAGGAGGGATGAACAAGGGCGGAATGAACGA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGCATTGGACCGCCCATaGGCCCTGGGGGTCCCATGT +
Preference number: 5 (lower is better)
Translates to: GCGPPDRTGGVILTERACALDRP*ALGVPC
Trigger: ACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGGGCACTGCGTCCTGCTaGGGGATGGGTAGGGGGATC +
Preference number: 5 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQGTASC*GMGRGI
Trigger: GATCCCCCTACCCATCCCCAAGCAGGACGCAGTGCC...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGTCAAAGTCGGGGAGGTaGGCGCCCTGTGTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWSKSGR*APCVLE
Trigger: TTCCAGCACACAGGGCGCCAACCTCCCCGACTTTGA...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGCCGAGCTCTTGCCATaGCCCTCAGCACCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GCGPPDRTGGVILTERACAELLP*PSAPLG
Trigger: GCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCAGGGTCCCCATTGTaGGGGCCTGGCGGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGPGSPL*GPGGAA
Trigger: GGCTGCGCCGCCAGGCCCCAACAATGGGGACCCTGG...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCTCCCCCAGCACCCCTaGCGCCCATCTCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLLPQHP*RPSLGL
Trigger: CAGCCCGAGAGATGGGCGCAAGGGGTGCTGGGGGAG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GGGCCCATCGGCATGTCTGCGTGCATGTCTGCGTGCATGTCAGGGTaGATGTCCGGGTGCATGTCGGGGTGCATGTCAGGATGCATTGGA +
Preference number: 5 (lower is better)
Translates to: GPIGMSACMSACMSG*MSGCMSGCMSGCIG
Trigger: TCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCACCCTGACATGCACGCAGACATGCACGCAGACATGCCGATGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GGATTCATGCCAGGGCCCATCGGCATGTCTGCGTGCATGTCTGCGTaGATGTCAGGGTGCATGTCCGGGTGCATGTCGGGGTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: GFMPGPIGMSACMSA*MSGCMSGCMSGCMS
Trigger: TGACATGCACCCCGACATGCACCCGGACATGCACCCTGACATGCACGCAGACATGCACGCAGACATGCCGATGGGCCCTGGCATGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp ATAGAAGTTCTGGGCTGGCGGGATAGGGGGCATCATTCCAGAATGTaGGGAGTCTCCAGGGCCGTAGGGCATCATTGGAGGGCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: IEVLGWRDRGHHSRM*GVSRAVGHHWRAAR
Trigger: CCTGGCGGCCCTCCAATGATGCCCTACGGCCCTGGAGACTCCCCACATTCTGGAATGATGCCCCCTATCCCGCCAGCCCAGAACTTCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp GGCCCCAGAGCTCAGCAGTGCATGCCAGTCACTCACCGGCGCATATaGGGGGCTGTACTCTCTGTACTTGCGGTGACCTTTCTCACTGGG +
Preference number: 5 (lower is better)
Translates to: GPRAQQCMPVTHRRI*GAVLSVLAVTFLTG
Trigger: CCCAGTGAGAAAGGTCACCGCAAGTACAGAGAGTACAGCCCCCCATATGCGCCGGTGAGTGACTGGCATGCACTGCTGAGCTCTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595341.1
CDS-3UTR CAA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGATGACTTTGCCTTTCTaGTCCGACTGCTGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRMTLPF*SDCWWG
Trigger: GCCCCACCAGCAGTCGGACAAGAAAGGCAAAGTCAT...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCACACCAGGGGGCGGTTaGGGCAGGGGGTTGATGCCC +
Preference number: 5 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFTPGGG*GRGLMP
Trigger: GGGCATCAACCCCCTGCCCAAACCGCCCCCTGGTGT...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCTGGGCCCAGGGCCCATaGGCCCTGGGGGTCCACCGG +
Preference number: 5 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICWAQGP*ALGVHR
Trigger: CCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCA...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGGGGGTCCCATGTaGGGCCCAGGGCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGPGGPM*GPGPIG
Trigger: GCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGG...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTGCATTGGACCGCCCATaGGCCCTGGGGGTCCCATGT +
Preference number: 5 (lower is better)
Translates to: SLRPGTGESSQVCGHESVALDRP*ALGVPC
Trigger: ACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGC...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGGAGGAGCCGGTGGCATaGACTGTCTTGAGGATGCGA +
Preference number: 5 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWEEPVA*TVLRMR
Trigger: TCGCATCCTCAAGACAGTCAATGCCACCGGCTCCTC...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGGCCCTGCCATGGTCTaGGTTCCGGGTCTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRGPAMV*VPGLFG
Trigger: CCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCC...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp ATGTCTGCGTGCATGTCTGCGTGCATGTCAGGGTGCATGTCCGGGTaGATGTCGGGGTGCATGTCAGGATGCATTGGACCGCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: MSACMSACMSGCMSG*MSGCMSGCIGPPIG
Trigger: GCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCACCCTGACATGCACGCAGACATGCACGCAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp AGTACCAGTTTCCGGTGTCACCTTCCTCATTCTCCCGGTCCTGCTTaGTGCTCTCAGCCAGCCTCCTCGCTCTCTCCTCCTCCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: STSFRCHLPHSPGPA*CSQPASSLSPPPPA
Trigger: AGCAGGAGGAGGAGGAGAGAGCGAGGAGGCTGGCTGAGAGCAGCAAGCAGGACCGGGAGAATGAGGAAGGTGACACCGGAAACTGGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGAAGAAGCATGGCGTTaGTGCTTGGATTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPEEAWR*CLDFLL
Trigger: GAGGAGGAAATCCAAGCACAAACGCCATGCTTCTTC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGACTGCTGGTGGGGCTaGTCATGGTCACGACTCCGG +
Preference number: 5 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRDCWWG*SWSRLR
Trigger: CCGGAGTCGTGACCATGACAAGCCCCACCAGCAGTC...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GCAGAGGCTCCCCATCCCCTGGCTGCAGGGTTCCCACTCAGTCCGTTTCTTAAGGGTTTGGGCAGGGGGTaGATGCCCTGCTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: AEAPHPLAAGFPLSPFLKGLGRG*MPCFFS
Trigger: ACTGAAGAAGCAGGGCATCAACCCCCTGCCCAAACC...CTTAAGAAACGGACTGAGTGGGAACCCTGCAGCCAGGGGATGGGGAGCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGTTCTCCCGGTCCTGCTaGCTGCTCTCAGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQFSRSC*LLSASL
Trigger: GAGGCTGGCTGAGAGCAGCAAGCAGGACCGGGAGAA...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACTTCCTCCTCCTCCGTaGGGGGCGGCCCAGACCCCT +
Preference number: 5 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTLPPPP*GAAQTP
Trigger: AGGGGTCTGGGCCGCCCCCAACGGAGGAGGAGGAAG...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTGGGCTGCAGTGCAGGCATAGCGGGTGCGTGGCTTGAGGACCAGGACAGACCCGTGGCATTGACTGTCTaGAGGATGCGAGACAGAAGT +
Preference number: 5 (lower is better)
Translates to: LGCSAGIAGAWLEDQDRPVALTV*RMRDRS
Trigger: ACTTCTGTCTCGCATCCTCAAGACAGTCAATGCCAC...GGGTCTGTCCTGGTCCTCAAGCCACGCACCCGCTATGCCTGCACTGCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp GCCCGTAGTCCTCTGCATCCCCCAGGAGTCCGGGCTCCATCTCCATaGCCTCCTGCTGCTGGTAGAAGTTTTCATAGAAGTTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ARSPLHPPGVRAPSP*PPAAGRSFHRSSGL
Trigger: CAGCCCAGAACTTCTATGAAAACTTCTACCAGCAGCAGGAGGGCATGGAGATGGAGCCCGGACTCCTGGGGGATGCAGAGGACTACGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 90 bp GTGGGGTCGAAGCCTTTAAAAACATCCTTCAGGGATGCCGCATCCTaGTCACCCTCGCGGGCCGGACTGTTCCCAGCAAATGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: VGSKPLKTSFRDAAS*SPSRAGLFPANGLP
Trigger: AGGAAGCCCATTTGCTGGGAACAGTCCGGCCCGCGAGGGTGAGCAGGATGCGGCATCCCTGAAGGATGTTTTTAAAGGCTTCGACCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS-3UTR CAA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTTTGGAGTATGCCTTCTaGGGCAGGGGCGTGGCATGC +
Preference number: 5 (lower is better)
Translates to: SLRPGTGESSQVCGHESVLEYAF*GRGVAC
Trigger: GCATGCCACGCCCCTGCCCAAGAAGGCATACTCCAA...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACGGCTGCTGCCCTCCTaGGCACGCCGGTACTGGTTC +
Preference number: 5 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTRLLPS*ARRYWF
Trigger: GAACCAGTACCGGCGTGCCAAGGAGGGCAGCAGCCG...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTGACTGCTGGTGGGGCTaGTCATGGTCACGACTCCGG +
Preference number: 5 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLDCWWG*SWSRLR
Trigger: CCGGAGTCGTGACCATGACAAGCCCCACCAGCAGTC...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGCATGTCAGGATGCATaGGACCGCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRACQDA*DRPLAL
Trigger: CAGGGCCAATGGGCGGTCCAATGCATCCTGACATGC...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGGCCGTAGGGCATCATaGGAGGGCCGCCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICGRRAS*EGRQGP
Trigger: TGGGCCCTGGCGGCCCTCCAATGATGCCCTACGGCC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GCCTGCACTGAAAAGACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGAGGCACTGCGTCCTGCTaGGGGATGGGTAGGGGGATC +
Preference number: 5 (lower is better)
Translates to: ACTEKTVMVHPRVLETPGGTASC*GMGRGI
Trigger: GATCCCCCTACCCATCCCCAAGCAGGACGCAGTGCC...TCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGTCTTTTCAGTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACGGGGGTCACTGGGTTaGTCGCTGGAACCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVRGSLG*SLEPGA
Trigger: CGCCCCCGGTTCCAGCGACAAACCCAGTGACCCCCG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TGCTTCCACGCAGGCCCTGCCATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGTGTCTCCTGAGTGGGTaGTTACAGCCTGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: CFHAGPAMVLVPGLFGHRCLLSG*LQPALK
Trigger: TTTCAGTGCAGGCTGTAACAACCCACTCAGGAGACA...CCTGTGCCCGAAGAGACCCGGAACCAAGACCATGGCAGGGCCTGCGTGGAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGCGGCCCCCACTACCTTaGGGTCCAGTTCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: TVMVHPRVLETPGPASTQRPPLP*GPVLTV
Trigger: CACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCG...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGGTGTGGCCCACCTGATAGGACAGGTGGGGTAATACTGACAGAACGTGCGTGCGAAAACAGAGAACACTaGGCCAGGAGCCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: GCGPPDRTGGVILTERACENREH*ARSHPR
Trigger: CCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTTC...GCACGCACGTTCTGTCAGTATTACCCCACCTGTCCTATCAGGTGGGCCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CAAGTTCCCTACCCTGGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTGGACAGAGCAACACACCTaGGAACACCTGCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: QVPYPGCCPECHPRKGGWTEQHT*EHLHLL
Trigger: CAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGT...CCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCCAGGGTAGGGAACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp ACGATCTCAAACAAGGAGGGGATCTTCTTGTTGTACATGTCCTGCTaGTGCAGCTGCTGCGGGGACAGTGGCTCATGCACCGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: TISNKEGIFLLYMSC*CSCCGDSGSCTGMG
Trigger: GCCCATGCCGGTGCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAAGAAGATCCCCTCCTTGTTTGAGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp TTCCGGTGTCACCTGCATCCCCCAGGAGTCCGGGCTCCATCTCCATaGCCTCCTGCTGCTGGTAGAAGTTTTCATAGAAGTTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: FRCHLHPPGVRAPSP*PPAAGRSFHRSSGL
Trigger: CAGCCCAGAACTTCTATGAAAACTTCTACCAGCAGCAGGAGGGCATGGAGATGGAGCCCGGACTCCTGGGGGATGCAGGTGACACCGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601973.1
CDS-3UTR CAA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTTCGTTCATTCCGCCCTaGTTCATCCCTCCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: SLRPGTGESSQVCGHESVSFIPP*FIPPRL
Trigger: CAGCCGAGGAGGGATGAACAAGGGCGGAATGAACGA...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGAGGGTCACGTCCTTCTaGATGTGGCTGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQRVTSF*MWLNCC
Trigger: GCAGCAGTTCAGCCACATCAAGAAGGACGTGACCCT...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGACACCAACTGTTCTCAAAGTCGGGGAGGTaGGCGCCCTGTGTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LFGHRVRSVQYLPRHQLFSKSGR*APCVLE
Trigger: TTCCAGCACACAGGGCGCCAACCTCCCCGACTTTGA...GAACAGTTGGTGTCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGGGGGCTCCTTAGCCTaGGAGGCCGAGCTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LHLLAWERKPEHINTSCPGGSLA*EAELLP
Trigger: TGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCC...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTTGTTCCAGGGCAGACTaGCGGACGAACGGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LHLLAWERKPEHINTSCPCSRAD*RTNGGS
Trigger: GGAGCCCCCGTTCGTCCGCAAGTCTGCCCTGGAACA...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp ATCTCAAACAAGGAGGGGATCTTCTTGTTGTACATGTCCTGCTGCTaGAGCTGCTGCGGGGACAGTGGCTCATGCACCGGCATGGGCATC +
Preference number: 5 (lower is better)
Translates to: ISNKEGIFLLYMSCC*SCCGDSGSCTGMGI
Trigger: GATGCCCATGCCGGTGCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAAGAAGATCCCCTCCTTGTTTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 90 bp ACCACGATCTCAAACAAGGAGGGGATCTTCTTGTTGTACATGTCCTaGTGCTGCAGCTGCTGCGGGGACAGTGGCTCATGCACCGGCATG +
Preference number: 5 (lower is better)
Translates to: TTISNKEGIFLLYMS*CCSCCGDSGSCTGM
Trigger: CATGCCGGTGCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAAGAAGATCCCCTCCTTGTTTGAGATCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGAGGGTCACGTCCTTCTaGATGTGGCTGAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQRVTSF*MWLNCC
Trigger: GCAGCAGTTCAGCCACATCAAGAAGGACGTGACCCT...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACGGGCGAAGCTGGGCTaGCTCAGGGTCACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVRAKLG*LRVTSF
Trigger: GAAGGACGTGACCCTGAGCAAGCCCAGCTTCGCCCG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTATTGCCCTCAGCACCCTaGGGCTGGGCACCCGTGTCA +
Preference number: 5 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVLPSAP*GWAPVS
Trigger: TGACACGGGTGCCCAGCCCAAGGGTGCTGAGGGCAA...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGATCAGCAATGAAGAGCTaGGCCTGCAGCCACATGGTG +
Preference number: 5 (lower is better)
Translates to: LVPGLFGHRVRSVQYLPRSAMKS*ACSHMV
Trigger: CACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGA...TCTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS TCA 90 bp AGTGGTCTCCCCAGGTGCAGCGCCCTTCCACGAAGTACTTGCAAATaGCTTTGCCTTTCTTGTCCGACTGCTGGTGGGGCTTGTCATGGT +
Preference number: 5 (lower is better)
Translates to: SGLPRCSALPRSTCK*LCLSCPTAGGACHG
Trigger: ACCATGACAAGCCCCACCAGCAGTCGGACAAGAAAGGCAAAGTCATTTGCAAGTACTTCGTGGAAGGGCGCTGCACCTGGGGAGACCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGCATGTCAGGATGCATaGGACCGCCCATTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTACQDA*DRPLAL
Trigger: CAGGGCCAATGGGCGGTCCAATGCATCCTGACATGC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGCTTCCTGAGCCCGTCTaGGGTGTCTGCTTCACCGTC +
Preference number: 5 (lower is better)
Translates to: GNPNTSIPHALQVTQCKELPEPV*GVCFTV
Trigger: GACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAG...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCTGCATCTGCTGGCTaGGGAAAGGAAACCCGAACA +
Preference number: 5 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLPASAG*GKETRT
Trigger: TGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAGG...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGACAGTTCTCGCTTCTTaGGGAGTTCGATGTCATGGC +
Preference number: 5 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQTVLAS*GVRCHG
Trigger: GCCATGACATCGAACTCCCAAAGAAGCGAGAACTGT...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp AGTCTGAGGCCAGGCACTGGCGAAAGTTCACAGGTTTGCGGGCATGAGTCGGTTCCTCATCCTCATCACTaGAGTACCAGTTTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: SLRPGTGESSQVCGHESVPHPHH*STSFRC
Trigger: ACACCGGAAACTGGTACTCAAGTGATGAGGATGAGG...AACCGACTCATGCCCGCAAACCTGTGAACTTTCGCCAGTGCCTGGCCTCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GTCTCTTCATGGTCAGCAATGAAGAGCTTGGCCTGCAGCCACATGGTGGGCCAGGTGGCATTGACTGTCTaGAGGATGCGAGACAGAAGT +
Preference number: 5 (lower is better)
Translates to: VSSWSAMKSLACSHMVGQVALTV*RMRDRS
Trigger: ACTTCTGTCTCGCATCCTCAAGACAGTCAATGCCAC...CTGGCCCACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGACCATGAAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCCTTCCTGAGCCCGTCTaGGGTGTCTGCTTCACCGTC +
Preference number: 5 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICLPEPV*GVCFTV
Trigger: GACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAG...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ACAGTGATGGTGCACCCTAGGGTTCTAGAAACGCCTGGACCTGCTTCCACGCAGTGTCTCCTGAGTGGGTaGTTACAGCCTGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: TVMVHPRVLETPGPASTQCLLSG*LQPALK
Trigger: TTTCAGTGCAGGCTGTAACAACCCACTCAGGAGACA...CTGCGTGGAAGCAGGTCCAGGCGTTTCTAGAACCCTAGGGTGCACCATCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTACGGCCCCCACTACCTTaGGGTCCAGTTCTCACTGTG +
Preference number: 5 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVRPPLP*GPVLTV
Trigger: CACAGTGAGAACTGGACCCAAAGGTAGTGGGGGCCG...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp TGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACAGAAAACAGAGAACACTaGGCCAGGAGCCACCCCAGG +
Preference number: 5 (lower is better)
Translates to: WLGKGNPNTSIPHALQVTENREH*ARSHPR
Trigger: CCTGGGGTGGCTCCTGGCCAAGTGTTCTCTGTTTTC...TGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTGCATGGCGTTTGTGCTaGGATTTCCTCCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLAWRLC*DFLLFF
Trigger: GAAGAAGAGGAGGAAATCCAAGCACAAACGCCATGC...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp CTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTCCCAGCCTTCCACGAAGTACTaGCAAATGACTTTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LGSGSLRAQGEERSIPSQPSTKY*QMTLPF
Trigger: GAAAGGCAAAGTCATTTGCAAGTACTTCGTGGAAGG...CTGGGAAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ATGGTCTTGGTTCCGGGTCTCTTCGGGCACAGGGTGAGGAGCGTTCAATACCTTACAGTTCTCGCTTCTTaGGGAGTTCGATGTCATGGC +
Preference number: 5 (lower is better)
Translates to: MVLVPGLFGHRVRSVQYLTVLAS*GVRCHG
Trigger: GCCATGACATCGAACTCCCAAAGAAGCGAGAACTGT...AAGGTATTGAACGCTCCTCACCCTGTGCCCGAAGAGACCCGGAACCAAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 90 bp AACATCTTATCCAAGAGCTCCCTCGTCTCTTCGGTCAGAGGGTCGTaGGAAAACATGCAGTCGTCACCATTGATGCAGTTCCCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: NILSKSSLVSSVRGS*ENMQSSPLMQFPVV
Trigger: CACCACTGGGAACTGCATCAATGGTGACGACTGCATGTTTTCCCACGACCCTCTGACCGAAGAGACGAGGGAGCTCTTGGATAAGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGCTCTTGCTGTCCATCTaGGAGTATGCCTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GNPNTSIPHALQVTQCKELLLSI*EYAFLG
Trigger: GCCCAAGAAGGCATACTCCAAGATGGACAGCAAGAG...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS-3UTR CAA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAATGACTTTGCCTTTCTaGTCCGACTGCTGGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVMTLPF*SDCWWG
Trigger: GCCCCACCAGCAGTCGGACAAGAAAGGCAAAGTCAT...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGAGGGGATCTTCTTGTaGTACATGTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GNPNTSIPHALQVTQCKEEGIFL*YMSCCC
Trigger: GCAGCAGCAGGACATGTACAACAAGAAGATCCCCTC...CTCCTTACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CCTCATGCCCTGCAGGTCACACAGTGTAAGGAGGTGCGAGGAAAACAGAGAACACCTCATCCTCATCACTaGAGTACCAGTTTCCGGTGT +
Preference number: 5 (lower is better)
Translates to: PHALQVTQCKEVRGKQRTPHPHH*STSFRC
Trigger: ACACCGGAAACTGGTACTCAAGTGATGAGGATGAGG...TGTTCTCTGTTTTCCTCGCACCTCCTTACACTGTGTGACCTGCAGGGCATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp GGAAAGGAAACCCGAACACATCAATACCTCATGCCCTGCAGGTCACACAGTGTATCAGCAATGAAGAGCTaGGCCTGCAGCCACATGGTG +
Preference number: 5 (lower is better)
Translates to: GKETRTHQYLMPCRSHSVSAMKS*ACSHMV
Trigger: CACCATGTGGCTGCAGGCCAAGCTCTTCATTGCTGA...TACACTGTGTGACCTGCAGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCGAGGGGATCTTCTTGTaGTACATGTCCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICEGIFL*YMSCCC
Trigger: GCAGCAGCAGGACATGTACAACAAGAAGATCCCCTC...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS TCA 90 bp GTACTTGCGGTGACCTTTCTCACTGGGGCTGAAATCCGAGTCATCTaGGAAGTCAGAGAAGTCATCGCTAGAAGAAGCATGGCGTTTGTG +
Preference number: 5 (lower is better)
Translates to: VLAVTFLTGAEIRVI*EVREVIARRSMAFV
Trigger: CACAAACGCCATGCTTCTTCTAGCGATGACTTCTCTGACTTCTCAGATGACTCGGATTTCAGCCCCAGTGAGAAAGGTCACCGCAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000595341.1
ENST00000597069.1
CDS GCA 90 bp CGCCCTCATATTCCCCATACTGCTCATTCTCGTAGTCCTCGTACATaGCATAACTCTTGCTGTCCATCTTGGAGTATGCCTTCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: RPHIPHTAHSRSPRT*HNSCCPSWSMPSWA
Trigger: TGCCCAAGAAGGCATACTCCAAGATGGACAGCAAGAGTTATGGCATGTACGAGGACTACGAGAATGAGCAGTATGGGGAATATGAGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000597069.1
CDS-3UTR CAA 90 bp CTTAAGTGTCCACAAATCCCACAGAGCAACACACCTTGGAACACCTGCATCTGCAAGGAGGGGATCTTCTaGTTGTACATGTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LKCPQIPQSNTPWNTCICKEGIF*LYMSCC
Trigger: GCAGCAGGACATGTACAACAAGAAGATCCCCTCCTT...GCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGTGGGATTTGTGGACACTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp CTGCATCTGCTGGCTTGGGAAAGGAAACCCGAACACATCAATACCTCATGCCCTCCTTCCACGAAGTACTaGCAAATGACTTTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LHLLAWERKPEHINTSCPPSTKY*QMTLPF
Trigger: GAAAGGCAAAGTCATTTGCAAGTACTTCGTGGAAGG...AGGGCATGAGGTATTGATGTGTTCGGGTTTCCTTTCCCAAGCCAGCAGATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS TCA 90 bp CACCGTGCATATAAGGGCAGTTCTCAGCTCTGGCGCAAAATCCAGTaGTGTAAAACTTGCACAGTTCTCGCTTCTTTGGGAGTTCGATGT +
Preference number: 5 (lower is better)
Translates to: HRAYKGSSQLWRKIQ*CKTCTVLASLGVRC
Trigger: ACATCGAACTCCCAAAGAAGCGAGAACTGTGCAAGTTTTACATCACTGGATTTTGCGCCAGAGCTGAGAACTGCCCTTATATGCACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS-3UTR CAA 90 bp ATATTCCAAGAGGAGGGCTCCAGCTTCTATTTCATCCACAGATTTCGGTTTAAAACAGAGCAACACACCTaGGAACACCTGCATCTGCTG +
Preference number: 5 (lower is better)
Translates to: IFQEEGSSFYFIHRFRFKTEQHT*EHLHLL
Trigger: CAGCAGATGCAGGTGTTCCAAGGTGTGTTGCTCTGT...TTTAAACCGAAATCTGTGGATGAAATAGAAGCTGGAGCCCTCCTCTTGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 90 bp CCACTCGGGCTGGCGGTGGGAGAGGGCGCCTCAGCAGGGCCGGGCTaGGCAGCCCGGGAGGAGGCCGTAGAGTCTGTGGGTTTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PLGLAVGEGASAGPG*AAREEAVESVGFCS
Trigger: GCTGCAGAAACCCACAGACTCTACGGCCTCCTCCCGGGCTGCCAAGCCCGGCCCTGCTGAGGCGCCCTCTCCCACCGCCAGCCCGAGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS GCA 72 bp GCAGCCCGGGAGGAGGCCGTAGAGTCTGTGGGTTTCTaGAGCCGAGGGTCGGTGGGGGCCTTCCGCACCCGG +
Preference number: 6 (lower is better)
Translates to: AAREEAVESVGF*SRGSVGAFRTR
Trigger: CCGGGTGCGGAAGGCCCCCACCGACCCTCGGCTGCAGAAACCCACAGACTCTACGGCCTCCTCCCGGGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp GACCGCCCATTGGCCCTGGGGGTCCCATGTTGGGCCCAGGGCCCATaGGCCCTGGGGGTCCACCGGGTCCAGGGAACCTCACACCCAGCT +
Preference number: 6 (lower is better)
Translates to: DRPLALGVPCWAQGP*ALGVHRVQGTSHPA
Trigger: AGCTGGGTGTGAGGTTCCCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp GCTGGGCACCCGTGTCAGCAGCCGGCTCTGTGGCTTTaGCCCCCGCGTTGGGAGTCCTCGGGTCGTAGAGGC +
Preference number: 6 (lower is better)
Translates to: AGHPCQQPALWL*PPRWESSGRRG
Trigger: GCCTCTACGACCCGAGGACTCCCAACGCGGGGGGCAAAGCCACAGAGCCGGCTGCTGACACGGGTGCCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CCA 72 bp TGGGGGTCCCATGTTGGGCCCAGGGCCCATTGGCCCTaGGGGTCCACCGGGTCCAGGGAACCTCACACCCAG +
Preference number: 6 (lower is better)
Translates to: WGSHVGPRAHWP*GSTGSREPHTQ
Trigger: CTGGGTGTGAGGTTCCCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp GGCCCACAGGGCTGGAATGAAGGCTGCCTTCGGGCTTaGAGGTGGGCAGGGCGCGAGCCAGCCGAGGATCGG +
Preference number: 6 (lower is better)
Translates to: GPQGWNEGCLRA*RWAGREPAEDR
Trigger: CCGATCCTCGGCTGGCTCGCGCCCTGCCCACCTCCAAGCCCGAAGGCAGCCTTCATTCCAGCCCTGTGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp TTGGCCCTGGGGGTCCCATGTTGGGCCCAGGGCCCATaGGCCCTGGGGGTCCACCGGGTCCAGGGAACCTCA +
Preference number: 6 (lower is better)
Translates to: LALGVPCWAQGP*ALGVHRVQGTS
Trigger: TGAGGTTCCCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp TGCATTGGACCGCCCATTGGCCCTGGGGGTCCCATGTaGGGCCCAGGGCCCATTGGCCCTGGGGGTCCACCG +
Preference number: 6 (lower is better)
Translates to: CIGPPIGPGGPM*GPGPIGPGGPP
Trigger: CGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 90 bp ATGTCAGGATGCATTGGACCGCCCATTGGCCCTGGGGGTCCCATGTaGGGCCCAGGGCCCATTGGCCCTGGGGGTCCACCGGGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: MSGCIGPPIGPGGPM*GPGPIGPGGPPGPG
Trigger: CCCTGGACCCGGTGGACCCCCAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 90 bp CGGACGAACGGGGGCTCCTTAGCCTTGGAGGCCGAGCTCTTGCCATaGCCCTCAGCACCCTTGGGCTGGGCACCCGTGTCAGCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: RTNGGSLALEAELLP*PSAPLGWAPVSAAG
Trigger: GCCGGCTGCTGACACGGGTGCCCAGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCCGTTCGTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CCA 72 bp GAATCACCTGGGCCAGACCCGCCAGAAGCCTCCACATaGCGGGTGAGTCTGGGGTCCCGGCTGAGGCGAGGG +
Preference number: 6 (lower is better)
Translates to: ESPGPDPPEAST*RVSLGSRLRRG
Trigger: CCCTCGCCTCAGCCGGGACCCCAGACTCACCCGCCATGTGGAGGCTTCTGGCGGGTCTGGCCCAGGTGATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp GCGAGCCAGCCGAGGATCGGAGGGTCCCGAATCACCTaGGCCAGACCCGCCAGAAGCCTCCACATGGCGGGT +
Preference number: 6 (lower is better)
Translates to: ASQPRIGGSRIT*ARPARSLHMAG
Trigger: ACCCGCCATGTGGAGGCTTCTGGCGGGTCTGGCCCAGGTGATTCGGGACCCTCCGATCCTCGGCTGGCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp GAAGTTCAAAGTCGGGGAGGTTGGCGCCCTGTGTGCTaGAATCCGTGGAGGCGCCCGGGCGCTGCCGGGCGT +
Preference number: 6 (lower is better)
Translates to: EVQSRGGWRPVC*NPWRRPGAAGR
Trigger: ACGCCCGGCAGCGCCCGGGCGCCTCCACGGATTCCAGCACACAGGGCGCCAACCTCCCCGACTTTGAACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CCA 72 bp GGGGGTGCCCCCATCAGCACCGGCCTTCCCTGTCTCTaGCTGTTCCAGGGCAGACTTGCGGACGAACGGGGG +
Preference number: 6 (lower is better)
Translates to: GGAPISTGLPCL*LFQGRLADERG
Trigger: CCCCCGTTCGTCCGCAAGTCTGCCCTGGAACAGCCAGAGACAGGGAAGGCCGGTGCTGATGGGGGCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CCA 72 bp CCGTCTTGGGTGTCTGCTTCACCGTCCCGAAGAGGGTaGGCACGGGCAGGTTGTGCACCCCGGGCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: PSWVSASPSRRG*ARAGCAPRAGV
Trigger: CACCCCAGCCCGGGGTGCACAACCTGCCCGTGCCCACCCTCTTCGGGACGGTGAAGCAGACACCCAAGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp CCGGGTGCATGTCGGGGTGCATGTCAGGATGCATTGGACCGCCCATaGGCCCTGGGGGTCCCATGTTGGGCCCAGGGCCCATTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PGACRGACQDALDRP*ALGVPCWAQGPLAL
Trigger: CAGGGCCAATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp GAGGGCCGCCAGGGCCCATGGGTGGGCCAGGATTCATaGCAGGGCCCATCGGCATGTCTGCGTGCATGTCTG +
Preference number: 6 (lower is better)
Translates to: EGRQGPWVGQDS*QGPSACLRACL
Trigger: CAGACATGCACGCAGACATGCCGATGGGCCCTGGCATGAATCCTGGCCCACCCATGGGCCCTGGCGGCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp AACTGCTGCAGCTGTGACCGTGGGTCCCGCAGAGGGTaGCCGGGGAGTGGGTCCAGGGGAATGTTCACGGCC +
Preference number: 6 (lower is better)
Translates to: NCCSCDRGSRRG*PGSGSRGMFTA
Trigger: GGCCGTGAACATTCCCCTGGACCCACTCCCCGGGCACCCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp ACAGAAGTTCAAAGTCGGGGAGGTTGGCGCCCTGTGTaGTGGAATCCGTGGAGGCGCCCGGGCGCTGCCGGG +
Preference number: 6 (lower is better)
Translates to: TEVQSRGGWRPV*WNPWRRPGAAG
Trigger: CCCGGCAGCGCCCGGGCGCCTCCACGGATTCCAGCACACAGGGCGCCAACCTCCCCGACTTTGAACTTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp CAGGGTGCATGTCCGGGTGCATGTCGGGGTGCATGTCAGGATGCATaGGACCGCCCATTGGCCCTGGGGGTCCCATGTTGGGCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: QGACPGACRGACQDA*DRPLALGVPCWAQG
Trigger: GCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 90 bp TCGCGGGCCGGACTGTTCCCAGCAAATGGGCTTCCTGAGCCCGTCTaGGGTGTCTGCTTCACCGTCCCGAAGAGGGTGGGCACGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SRAGLFPANGLPEPV*GVCFTVPKRVGTGR
Trigger: CCTGCCCGTGCCCACCCTCTTCGGGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCTGGGAACAGTCCGGCCCGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CCA 72 bp GTCGGGGTGCATGTCAGGATGCATTGGACCGCCCATTaGCCCTGGGGGTCCCATGTTGGGCCCAGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: VGVHVRMHWTAH*PWGSHVGPRAH
Trigger: ATGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp GCCGAGCTCTTGCCATTGCCCTCAGCACCCTTGGGCTaGGCACCCGTGTCAGCAGCCGGCTCTGTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: AELLPLPSAPLG*APVSAAGSVAL
Trigger: CAAAGCCACAGAGCCGGCTGCTGACACGGGTGCCCAGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 72 bp TGTCGGGGTGCATGTCAGGATGCATTGGACCGCCCATaGGCCCTGGGGGTCCCATGTTGGGCCCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: CRGACQDALDRP*ALGVPCWAQGP
Trigger: TGGGCCCTGGGCCCAACATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp GGGGGCTCCTTAGCCTTGGAGGCCGAGCTCTTGCCATaGCCCTCAGCACCCTTGGGCTGGGCACCCGTGTCA +
Preference number: 6 (lower is better)
Translates to: GGSLALEAELLP*PSAPLGWAPVS
Trigger: TGACACGGGTGCCCAGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 72 bp ACGAACGGGGGCTCCTTAGCCTTGGAGGCCGAGCTCTaGCCATTGCCCTCAGCACCCTTGGGCTGGGCACCC +
Preference number: 6 (lower is better)
Translates to: TNGGSLALEAEL*PLPSAPLGWAP
Trigger: GGGTGCCCAGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCCGTTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp TCCTTAGCCTTGGAGGCCGAGCTCTTGCCATTGCCCTCAGCACCCTaGGGCTGGGCACCCGTGTCAGCAGCCGGCTCTGTGGCTTTGCCC +
Preference number: 6 (lower is better)
Translates to: SLALEAELLPLPSAP*GWAPVSAAGSVALP
Trigger: GGGCAAAGCCACAGAGCCGGCTGCTGACACGGGTGCCCAGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAAGGCTAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp GACTTGCGGACGAACGGGGGCTCCTTAGCCTTGGAGGCCGAGCTCTaGCCATTGCCCTCAGCACCCTTGGGCTGGGCACCCGTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: DLRTNGGSLALEAEL*PLPSAPLGWAPVSA
Trigger: TGCTGACACGGGTGCCCAGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCCGTTCGTCCGCAAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp GGCTGTTCCAGGGCAGACTTGCGGACGAACGGGGGCTCCTTAGCCTaGGAGGCCGAGCTCTTGCCATTGCCCTCAGCACCCTTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: GCSRADLRTNGGSLA*EAELLPLPSAPLGW
Trigger: CCAGCCCAAGGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCCGTTCGTCCGCAAGTCTGCCCTGGAACAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS GCA 72 bp CCAGGGCCCATCGGCATGTCTGCGTGCATGTCTGCGTaGATGTCAGGGTGCATGTCCGGGTGCATGTCGGGG +
Preference number: 6 (lower is better)
Translates to: PGPIGMSACMSA*MSGCMSGCMSG
Trigger: CCCCGACATGCACCCGGACATGCACCCTGACATGCACGCAGACATGCACGCAGACATGCCGATGGGCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp GTAGGGGGATCAGGTCCTCGGGATTCCAGAGCACGGTaGGGGCGAAGCTGGGCTTGCTCAGGGTCACGTCCT +
Preference number: 6 (lower is better)
Translates to: VGGSGPRDSRAR*GRSWACSGSRP
Trigger: AGGACGTGACCCTGAGCAAGCCCAGCTTCGCCCGCACCGTGCTCTGGAATCCCGAGGACCTGATCCCCCTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp AGGGCAGACTTGCGGACGAACGGGGGCTCCTTAGCCTaGGAGGCCGAGCTCTTGCCATTGCCCTCAGCACCC +
Preference number: 6 (lower is better)
Translates to: RADLRTNGGSLA*EAELLPLPSAP
Trigger: GGGTGCTGAGGGCAATGGCAAGAGCTCGGCCTCCAAGGCTAAGGAGCCCCCGTTCGTCCGCAAGTCTGCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp TCGCTGGAACCGGGGGCGGCCGAGGAGCCGGTGGCATTGACTGTCTaGAGGATGCGAGACAGAAGTTCAAAGTCGGGGAGGTTGGCGCCC +
Preference number: 6 (lower is better)
Translates to: SLEPGAAEEPVALTV*RMRDRSSKSGRLAP
Trigger: GGGCGCCAACCTCCCCGACTTTGAACTTCTGTCTCGCATCCTCAAGACAGTCAATGCCACCGGCTCCTCGGCCGCCCCCGGTTCCAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS TCA 72 bp CTCGCGGGCCGGACTGTTCCCAGCAAATGGGCTTCCTaGGCCCGTCTTGGGTGTCTGCTTCACCGTCCCGAA +
Preference number: 6 (lower is better)
Translates to: LAGRTVPSKWAS*ARLGCLLHRPE
Trigger: TTCGGGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCTGGGAACAGTCCGGCCCGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS GCA 72 bp CATCGTTCATTCCGCCCTTGTTCATCCCTCCTCGGCTaGCACCTCGGCCTCGGCCCCGACCCATTCCTTTCC +
Preference number: 6 (lower is better)
Translates to: HRSFRPCSSLLG*HLGLGPDPFLS
Trigger: GGAAAGGAATGGGTCGGGGCCGAGGCCGAGGTGGCAGCCGAGGAGGGATGAACAAGGGCGGAATGAACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp TGCATGTCCGGGTGCATGTCGGGGTGCATGTCAGGATaGATTGGACCGCCCATTGGCCCTGGGGGTCCCATG +
Preference number: 6 (lower is better)
Translates to: CMSGCMSGCMSG*IGPPIGPGGPM
Trigger: CATGGGACCCCCAGGGCCAATGGGCGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp CTCAGGGTCACGTCCTTCTTGATGTGGCTGAACTGCTaGAGCTGTGACCGTGGGTCCCGCAGAGGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: LRVTSFLMWLNC*SCDRGSRRGCP
Trigger: CGGGCACCCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTTCAGCCACATCAAGAAGGACGTGACCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp TGCTGCTCAGCTCCCCAACTGAAGCCGGGGGTCGGCTaGACGTCTGCTGCCTCAAGGTCTTCAGGATGGAGG +
Preference number: 6 (lower is better)
Translates to: CCSAPQLKPGVG*TSAASRSSGWR
Trigger: CCTCCATCCTGAAGACCTTGAGGCAGCAGACGTCCAGCCGACCCCCGGCTTCAGTTGGGGAGCTGAGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp CCGGGGGCGGCCGAGGAGCCGGTGGCATTGACTGTCTaGAGGATGCGAGACAGAAGTTCAAAGTCGGGGAGG +
Preference number: 6 (lower is better)
Translates to: PGAAEEPVALTV*RMRDRSSKSGR
Trigger: CCTCCCCGACTTTGAACTTCTGTCTCGCATCCTCAAGACAGTCAATGCCACCGGCTCCTCGGCCGCCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp AGCACGGTGCGGGCGAAGCTGGGCTTGCTCAGGGTCACGTCCTTCTaGATGTGGCTGAACTGCTGCAGCTGTGACCGTGGGTCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: STVRAKLGLLRVTSF*MWLNCCSCDRGSRR
Trigger: TCTGCGGGACCCACGGTCACAGCTGCAGCAGTTCAGCCACATCAAGAAGGACGTGACCCTGAGCAAGCCCAGCTTCGCCCGCACCGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 90 bp TTGACTGTCTTGAGGATGCGAGACAGAAGTTCAAAGTCGGGGAGGTaGGCGCCCTGTGTGCTGGAATCCGTGGAGGCGCCCGGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: LTVLRMRDRSSKSGR*APCVLESVEAPGRC
Trigger: GCAGCGCCCGGGCGCCTCCACGGATTCCAGCACACAGGGCGCCAACCTCCCCGACTTTGAACTTCTGTCTCGCATCCTCAAGACAGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp CTGGGTTTGTCGCTGGAACCGGGGGCGGCCGAGGAGCCGGTGGCATaGACTGTCTTGAGGATGCGAGACAGAAGTTCAAAGTCGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LGLSLEPGAAEEPVA*TVLRMRDRSSKSGR
Trigger: CCTCCCCGACTTTGAACTTCTGTCTCGCATCCTCAAGACAGTCAATGCCACCGGCTCCTCGGCCGCCCCCGGTTCCAGCGACAAACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS GCA 72 bp CGGTGTCACCTTCCTCATTCTCCCGGTCCTGCTTGCTaGTCTCAGCCAGCCTCCTCGCTCTCTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RCHLPHSPGPAC*SQPASSLSPPP
Trigger: AGGAGGAGGAGAGAGCGAGGAGGCTGGCTGAGAGCAGCAAGCAGGACCGGGAGAATGAGGAAGGTGACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 72 bp AGCTCCCCAACTGAAGCCGGGGGTCGGCTGGACGTCTaGTGCCTCAAGGTCTTCAGGATGGAGGTGACACTG +
Preference number: 6 (lower is better)
Translates to: SSPTEAGGRLDV*CLKVFRMEVTL
Trigger: CAGTGTCACCTCCATCCTGAAGACCTTGAGGCAGCAGACGTCCAGCCGACCCCCGGCTTCAGTTGGGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp CTGGGCTGGCGGGATAGGGGGCATCATTCCAGAATGTaGGGAGTCTCCAGGGCCGTAGGGCATCATTGGAGG +
Preference number: 6 (lower is better)
Translates to: LGWRDRGHHSRM*GVSRAVGHHWR
Trigger: CCTCCAATGATGCCCTACGGCCCTGGAGACTCCCCACATTCTGGAATGATGCCCCCTATCCCGCCAGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp GGGTGCTGCCCTGAATGCCACCCTAGGAAGGGTGGCTaGAGCCGCAGCTCTGGCTGGACACTACTGGCAAAA +
Preference number: 6 (lower is better)
Translates to: GCCPECHPRKGG*SRSSGWTLLAK
Trigger: TTTTGCCAGTAGTGTCCAGCCAGAGCTGCGGCTCCAGCCACCCTTCCTAGGGTGGCATTCAGGGCAGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 90 bp GAGTACCAGTTTCCGGTGTCACCTTCCTCATTCTCCCGGTCCTGCTaGCTGCTCTCAGCCAGCCTCCTCGCTCTCTCCTCCTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: EYQFPVSPSSFSRSC*LLSASLLALSSSSC
Trigger: GCAGGAGGAGGAGGAGAGAGCGAGGAGGCTGGCTGAGAGCAGCAAGCAGGACCGGGAGAATGAGGAAGGTGACACCGGAAACTGGTACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 72 bp GGGATCTTCTTGTTGTACATGTCCTGCTGCTGCAGCTaGTGCGGGGACAGTGGCTCATGCACCGGCATGGGC +
Preference number: 6 (lower is better)
Translates to: GIFLLYMSCCCS*CGDSGSCTGMG
Trigger: GCCCATGCCGGTGCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAAGAAGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp TTCCGGTGTCACCTTCCTCATTCTCCCGGTCCTGCTTaGTGCTCTCAGCCAGCCTCCTCGCTCTCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: FRCHLPHSPGPA*CSQPASSLSPP
Trigger: AGGAGGAGAGAGCGAGGAGGCTGGCTGAGAGCAGCAAGCAGGACCGGGAGAATGAGGAAGGTGACACCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 72 bp CAGTTTCCGGTGTCACCTTCCTCATTCTCCCGGTCCTaGTTGCTGCTCTCAGCCAGCCTCCTCGCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: QFPVSPSSFSRS*LLLSASLLALS
Trigger: GGAGAGAGCGAGGAGGCTGGCTGAGAGCAGCAAGCAGGACCGGGAGAATGAGGAAGGTGACACCGGAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 72 bp TCCCCAACTGAAGCCGGGGGTCGGCTGGACGTCTGCTaGCTCAAGGTCTTCAGGATGGAGGTGACACTGCTT +
Preference number: 6 (lower is better)
Translates to: SPTEAGGRLDVC*LKVFRMEVTLL
Trigger: AAGCAGTGTCACCTCCATCCTGAAGACCTTGAGGCAGCAGACGTCCAGCCGACCCCCGGCTTCAGTTGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp TTGCTCAGGGTCACGTCCTTCTTGATGTGGCTGAACTaGTGCAGCTGTGACCGTGGGTCCCGCAGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: LLRVTSFLMWLN*CSCDRGSRRGC
Trigger: GCACCCTCTGCGGGACCCACGGTCACAGCTGCAGCAGTTCAGCCACATCAAGAAGGACGTGACCCTGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp GACTGTTCCCAGCAAATGGGCTTCCTGAGCCCGTCTTaGGTGTCTGCTTCACCGTCCCGAAGAGGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: DCSQQMGFLSPS*VSASPSRRGWA
Trigger: TGCCCACCCTCTTCGGGACGGTGAAGCAGACACCCAAGACGGGCTCAGGAAGCCCATTTGCTGGGAACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 72 bp TCGGGATTCCAGAGCACGGTGCGGGCGAAGCTGGGCTaGCTCAGGGTCACGTCCTTCTTGATGTGGCTGAAC +
Preference number: 6 (lower is better)
Translates to: SGFQSTVRAKLG*LRVTSFLMWLN
Trigger: GTTCAGCCACATCAAGAAGGACGTGACCCTGAGCAAGCCCAGCTTCGCCCGCACCGTGCTCTGGAATCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp TTGAGGATGCGAGACAGAAGTTCAAAGTCGGGGAGGTaGGCGCCCTGTGTGCTGGAATCCGTGGAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: LRMRDRSSKSGR*APCVLESVEAP
Trigger: GGGCGCCTCCACGGATTCCAGCACACAGGGCGCCAACCTCCCCGACTTTGAACTTCTGTCTCGCATCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS CAA 72 bp TCGCTGGAACCGGGGGCGGCCGAGGAGCCGGTGGCATaGACTGTCTTGAGGATGCGAGACAGAAGTTCAAAG +
Preference number: 6 (lower is better)
Translates to: SLEPGAAEEPVA*TVLRMRDRSSK
Trigger: CTTTGAACTTCTGTCTCGCATCCTCAAGACAGTCAATGCCACCGGCTCCTCGGCCGCCCCCGGTTCCAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000601973.1
CDS GCA 72 bp AAGGAGGGGATCTTCTTGTTGTACATGTCCTGCTGCTaGAGCTGCTGCGGGGACAGTGGCTCATGCACCGGC +
Preference number: 6 (lower is better)
Translates to: KEGIFLLYMSCC*SCCGDSGSCTG
Trigger: GCCGGTGCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAAGAAGATCCCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp TGCATGTCTGCGTGCATGTCAGGGTGCATGTCCGGGTaGATGTCGGGGTGCATGTCAGGATGCATTGGACCG +
Preference number: 6 (lower is better)
Translates to: CMSACMSGCMSG*MSGCMSGCIGP
Trigger: CGGTCCAATGCATCCTGACATGCACCCCGACATGCACCCGGACATGCACCCTGACATGCACGCAGACATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CCA 72 bp GCTCAGCAGTGCATGCCAGTCACTCACCGGCGCATATaGGGGGCTGTACTCTCTGTACTTGCGGTGACCTTT +
Preference number: 6 (lower is better)
Translates to: AQQCMPVTHRRI*GAVLSVLAVTF
Trigger: AAAGGTCACCGCAAGTACAGAGAGTACAGCCCCCCATATGCGCCGGTGAGTGACTGGCATGCACTGCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595341.1
CDS GCA 72 bp AACAAGGAGGGGATCTTCTTGTTGTACATGTCCTGCTaGTGCAGCTGCTGCGGGGACAGTGGCTCATGCACC +
Preference number: 6 (lower is better)
Translates to: NKEGIFLLYMSC*CSCCGDSGSCT
Trigger: GGTGCATGAGCCACTGTCCCCGCAGCAGCTGCAGCAGCAGGACATGTACAACAAGAAGATCCCCTCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS GCA 72 bp CCTCTGCATCCCCCAGGAGTCCGGGCTCCATCTCCATaGCCTCCTGCTGCTGGTAGAAGTTTTCATAGAAGT +
Preference number: 6 (lower is better)
Translates to: PLHPPGVRAPSP*PPAAGRSFHRS
Trigger: ACTTCTATGAAAACTTCTACCAGCAGCAGGAGGGCATGGAGATGGAGCCCGGACTCCTGGGGGATGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS GCA 72 bp CACCTGCATCCCCCAGGAGTCCGGGCTCCATCTCCATaGCCTCCTGCTGCTGGTAGAAGTTTTCATAGAAGT +
Preference number: 6 (lower is better)
Translates to: HLHPPGVRAPSP*PPAAGRSFHRS
Trigger: ACTTCTATGAAAACTTCTACCAGCAGCAGGAGGGCATGGAGATGGAGCCCGGACTCCTGGGGGATGCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601973.1
CDS CCA 72 bp AGTCCTCGTACATGCCATAACTCTTGCTGTCCATCTTaGAGTATGCCTTCTTGGGCAGGGGCGTGGCATGCG +
Preference number: 6 (lower is better)
Translates to: SPRTCHNSCCPS*SMPSWAGAWHA
Trigger: CGCATGCCACGCCCCTGCCCAAGAAGGCATACTCCAAGATGGACAGCAAGAGTTATGGCATGTACGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000597069.1
CDS CCA 72 bp TCCAAGAGCTCCCTCGTCTCTTCGGTCAGAGGGTCGTaGGAAAACATGCAGTCGTCACCATTGATGCAGTTC +
Preference number: 6 (lower is better)
Translates to: SKSSLVSSVRGS*ENMQSSPLMQF
Trigger: GAACTGCATCAATGGTGACGACTGCATGTTTTCCCACGACCCTCTGACCGAAGAGACGAGGGAGCTCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp GCTCCTTGGAGTACTCGTCATAGTCGTCGTCTCCCATaGGCTCCTCACTCTCTCCATAGTCCATCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: APWSTRHSRRLP*APHSLHSPSLP
Trigger: AGGAAGAGATGGACTATGGAGAGAGTGAGGAGCCAATGGGAGACGACGACTATGACGAGTACTCCAAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253048.10
CDS CAA 72 bp GTCAGAGGGTCGTGGGAAAACATGCAGTCGTCACCATaGATGCAGTTCCCAGTGGTGTGGTACAGCTTACAC +
Preference number: 6 (lower is better)
Translates to: VRGSWENMQSSP*MQFPVVWYSLH
Trigger: GTGTAAGCTGTACCACACCACTGGGAACTGCATCAATGGTGACGACTGCATGTTTTCCCACGACCCTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 90 bp GTCTCTTCGGTCAGAGGGTCGTGGGAAAACATGCAGTCGTCACCATaGATGCAGTTCCCAGTGGTGTGGTACAGCTTACACGGGAAATCA +
Preference number: 6 (lower is better)
Translates to: VSSVRGSWENMQSSP*MQFPVVWYSLHGKS
Trigger: TGATTTCCCGTGTAAGCTGTACCACACCACTGGGAACTGCATCAATGGTGACGACTGCATGTTTTCCCACGACCCTCTGACCGAAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS CAA 72 bp CCTTCCACGAAGTACTTGCAAATGACTTTGCCTTTCTaGTCCGACTGCTGGTGGGGCTTGTCATGGTCACGA +
Preference number: 6 (lower is better)
Translates to: PSTKYLQMTLPF*SDCWWGLSWSR
Trigger: TCGTGACCATGACAAGCCCCACCAGCAGTCGGACAAGAAAGGCAAAGTCATTTGCAAGTACTTCGTGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1
CDS TCA 72 bp ACTCTCTGTACTTGCGGTGACCTTTCTCACTGGGGCTaGAATCCGAGTCATCTGAGAAGTCAGAGAAGTCAT +
Preference number: 6 (lower is better)
Translates to: TLCTCGDLSHWG*NPSHLRSQRSH
Trigger: ATGACTTCTCTGACTTCTCAGATGACTCGGATTTCAGCCCCAGTGAGAAAGGTCACCGCAAGTACAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000595341.1
ENST00000597069.1
CDS GCA 72 bp ATTCCCCATACTGCTCATTCTCGTAGTCCTCGTACATaGCATAACTCTTGCTGTCCATCTTGGAGTATGCCT +
Preference number: 6 (lower is better)
Translates to: IPHTAHSRSPRT*HNSCCPSWSMP
Trigger: AGGCATACTCCAAGATGGACAGCAAGAGTTATGGCATGTACGAGGACTACGAGAATGAGCAGTATGGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253048.10
ENST00000594019.5
ENST00000597069.1
CDS CCA 72 bp TCCAGTGATGTAAAACTTGCACAGTTCTCGCTTCTTTaGGAGTTCGATGTCATGGCTAAAATTACAGTGGTC +
Preference number: 6 (lower is better)
Translates to: SSDVKLAQFSLL*EFDVMAKITVV
Trigger: GACCACTGTAATTTTAGCCATGACATCGAACTCCCAAAGAAGCGAGAACTGTGCAAGTTTTACATCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253048.10
ENST00000601973.1