RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H3 (Homo sapiens)

Ensembl gene IDs: ENSG00000014164

Ensembl transcript IDs: ENST00000262577.6, ENST00000528401.1, ENST00000632165.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGGCGGCCAGGTGCAGCTGTCCTTGGCGGGCCCGCGACCCTCTaGACCTGTGCCACCCTTTGGGCTGGGTCATCGGCCCAGGACCCA +
Preference number: 1 (lower is better)
Translates to: ARRPGAAVLGGPATL*TCATLWAGSSAQDP
Trigger: TGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCTGGCCGCCTGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR GCA 90 bp GAGTGCCGAGTTCAGCTCGTCCGGCAGAGGTGCCAGGCGGCCAGGTaGAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCAC +
Preference number: 1 (lower is better)
Translates to: ECRVQLVRQRCQAAR*SCPWRARDPLHLCH
Trigger: GTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCTGGCCGCCTGGCACCTCTGCCGGACGAGCTGAACTCGGCACTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR GCA 90 bp GACTTCATGGCCCCGGAGTGCCGAGTTCAGCTCGTCCGGCAGAGGTaGCAGGCGGCCAGGTGCAGCTGTCCTTGGCGGGCCCGCGACCCT +
Preference number: 1 (lower is better)
Translates to: DFMAPECRVQLVRQR*QAARCSCPWRARDP
Trigger: AGGGTCGCGGGCCCGCCAAGGACAGCTGCACCTGGCCGCCTGGCACCTCTGCCGGACGAGCTGAACTCGGCACTCCGGGGCCATGAAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR CCA 90 bp GGCCAGGCAGGCAGAGCAGTGTCCCTGTGGCCCCCAGGTGAGGCTTaGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCC +
Preference number: 1 (lower is better)
Translates to: GQAGRAVSLWPPGEA*WRAALLWGRVVDRA
Trigger: GGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTGGGGGCCACAGGGACACTGCTCTGCCTGCCTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR GCA 90 bp GCCAGGTGCAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTaGCACCCTTTGGGCTGGGTCATCGGCCCAGGACCCACTCTGTCT +
Preference number: 1 (lower is better)
Translates to: ARCSCPWRARDPLHL*HPLGWVIGPGPTLS
Trigger: AGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR CCA 90 bp CAGGCAGGCAGAGCAGTGTCCCTGTGGCCCCCAGGTGAGGCTTGGTaGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCT +
Preference number: 1 (lower is better)
Translates to: QAGRAVSLWPPGEAW*RAALLWGRVVDRAS
Trigger: AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTGGGGGCCACAGGGACACTGCTCTGCCTGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR CCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATaGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCTGTGGCCC +
Preference number: 1 (lower is better)
Translates to: PGLGEEDQALRTRWS*KVEGQAGRAVSLWP
Trigger: GGGCCACAGGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR CCA 90 bp CCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTaGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAG +
Preference number: 1 (lower is better)
Translates to: PWRARDPLHLCHPLG*VIGPGPTLSVPATE
Trigger: CTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR CCA 90 bp GCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTaGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTA +
Preference number: 1 (lower is better)
Translates to: AVLGGPATLCTCATL*AGSSAQDPLCLCQL
Trigger: TAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR TCA 90 bp GGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTaGGGGGCAGGCTGGCCAGGAATCCTGCCTAGGCCCTCAAGGACC +
Preference number: 1 (lower is better)
Translates to: GLGHRPRTHSVCASY*GAGWPGILPRPSRT
Trigger: GGTCCTTGAGGGCCTAGGCAGGATTCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR-3UTR CCA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCCAGGTGAGGCTTGGTaGCGGGCGGCCCTCCTGTGG +
Preference number: 2 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWPGEAW*RAALLW
Trigger: CCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTGG...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR CAA 90 bp TGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTaGAGGGCCAGGCAGGCAGAGCAGTGTCCCTGTGGCCCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: WGRKTRPCAHAGHGR*RARQAEQCPCGPQV
Trigger: CACCTGGGGGCCACAGGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR CAA 90 bp AGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTaGGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: SCPWRARDPLHLCHP*GWVIGPGPTLSVPA
Trigger: AGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR-3UTR TCA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCCAAGGATGAGGGTCTaGGGTAGGTGCAGGCCGGTC +
Preference number: 2 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWPRMRV*GRCRPV
Trigger: GACCGGCCTGCACCTACCTCAGACCCTCATCCTTGG...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR-3UTR TCA 90 bp TGGGACTTCATGGCCCCGGAGTGCCGAGTTCAGCTCGTCCGGCAGAGGTGCCAGGTCTGTGCCAGCTACTaGGGGGCAGGCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: WDFMAPECRVQLVRQRCQVCASY*GAGWPG
Trigger: TCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGAC...CTGGCACCTCTGCCGGACGAGCTGAACTCGGCACTCCGGGGCCATGAAGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR-3UTR CCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCCGGGCGGCCCTCCTGTaGGGTAGAGTGGTGGACAGA +
Preference number: 2 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGRAALL*GRVVDR
Trigger: TCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCG...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR-3UTR GCA 90 bp ATTAGTGGGACTTCATGGCCCCGGAGTGCCGAGTTCAGCTCGTCCGGCAGAGGTGCTGGCCAGGAATCCTaGCTAGGCCCTCAAGGACCC +
Preference number: 2 (lower is better)
Translates to: ISGTSWPRSAEFSSSGRGAGQES*LGPQGP
Trigger: GGGTCCTTGAGGGCCTAGGCAGGATTCCTGGCCAGC...ACCTCTGCCGGACGAGCTGAACTCGGCACTCCGGGGCCATGAAGTCCCACTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR-3UTR CCA 90 bp ATTAGTGGGACTTCATGGCCCCGGAGTGCCGAGTTCAGCTCGTCCGGCAGAGGTACCTGTGCCACCCTTTaGGCTGGGTCATCGGCCCAG +
Preference number: 2 (lower is better)
Translates to: ISGTSWPRSAEFSSSGRGTCATL*AGSSAQ
Trigger: CTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGT...ACCTCTGCCGGACGAGCTGAACTCGGCACTCCGGGGCCATGAAGTCCCACTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR GCA 72 bp GCCCCGGAGTGCCGAGTTCAGCTCGTCCGGCAGAGGTaGCAGGCGGCCAGGTGCAGCTGTCCTTGGCGGGCC +
Preference number: 3 (lower is better)
Translates to: APECRVQLVRQR*QAARCSCPWRA
Trigger: GGCCCGCCAAGGACAGCTGCACCTGGCCGCCTGGCACCTCTGCCGGACGAGCTGAACTCGGCACTCCGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR GCA 72 bp GTTCAGCTCGTCCGGCAGAGGTGCCAGGCGGCCAGGTaGAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: VQLVRQRCQAAR*SCPWRARDPLH
Trigger: GTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCTGGCCGCCTGGCACCTCTGCCGGACGAGCTGAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR GCA 72 bp AGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTaGCACCCTTTGGGCTGGGTCATCGGCCCAGGACCC +
Preference number: 3 (lower is better)
Translates to: SCPWRARDPLHL*HPLGWVIGPGP
Trigger: GGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR CCA 72 bp GGCAGAGCAGTGTCCCTGTGGCCCCCAGGTGAGGCTTaGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTG +
Preference number: 3 (lower is better)
Translates to: GRAVSLWPPGEA*WRAALLWGRVV
Trigger: CACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTGGGGGCCACAGGGACACTGCTCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR CCA 72 bp GGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTaGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: GGPATLCTCATL*AGSSAQDPLCL
Trigger: CAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR CCA 72 bp CCCCCAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTaGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: PPGEAWWRAALL*GRVVDRASFLS
Trigger: GGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR CCA 72 bp GCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTaGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCA +
Preference number: 3 (lower is better)
Translates to: ARDPLHLCHPLG*VIGPGPTLSVP
Trigger: TGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR CCA 72 bp GGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATaGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: GEEDQALRTRWS*KVEGQAGRAVS
Trigger: GGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR CCA 72 bp GGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTaGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: GLGEEDQALRTR*SWKVEGQAGRA
Trigger: TGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
3UTR GCA 72 bp TGGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTaGCAGCTACTGAGGGGCAGGCTGGCCAGGAATCCT +
Preference number: 3 (lower is better)
Translates to: WAGSSAQDPLCL*QLLRGRLARNP
Trigger: AGGATTCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR-3UTR CAA 90 bp AGTATTAGTGGGACTTCATGGCCCCGGAGTGCCGAGTTCAGCTCGTCCGGCAGACAGGTGCAGCTGTCCTaGGCGGGCCCGCGACCCTCT +
Preference number: 3 (lower is better)
Translates to: SISGTSWPRSAEFSSSGRQVQLS*AGPRPS
Trigger: AGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCTG...TCTGCCGGACGAGCTGAACTCGGCACTCCGGGGCCATGAAGTCCCACTAATACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
3UTR CCA 72 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTaGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGG +
Preference number: 3 (lower is better)
Translates to: RLGGGRPSCGVE*WTEPLSSPRMR
Trigger: CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGCCTGTGGCCCCCAGGTaGGGCTTGGTGGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLPVAPR*GLVAGG
Trigger: GCCGCCCGCCACCAAGCCTCACCTGGGGGCCACAGG...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTGGGCTCGTCCGGCAGAGGTaGCAGGCGGCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AVLGGPATLCTCATLWAGLVRQR*QAARCS
Trigger: GCTGCACCTGGCCGCCTGGCACCTCTGCCGGACGAG...CCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR TCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGGCTGCTCTTCCCCCTaGGGGCCTGTCTCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLGCSSP*GPVSAG
Trigger: TCCGGCGGAGACAGGCCCTCAGGGGGAAGAGCAGCC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCGGAAGGGCGGGGCGCTaGGAGGCGAGGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSGRAGR*EARPAS
Trigger: AGACGCCGGCCTCGCCTCTCAGCGCCCCGCCCTTCC...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTGGCCAGGAAGGAAGGGCGGGGCGCTaGGAGGCGAGGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: GPGPTLSVPATEGQAGQEGRAGR*EARPAS
Trigger: AGACGCCGGCCTCGCCTCTCAGCGCCCCGCCCTTCC...TTCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR TCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCACGGCAGCCGCAGTaGGGGCAGCCGAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFPRQPQ*GQPSWA
Trigger: CGCCCAGCTCGGCTGCCCTCACTGCGGCTGCCGTGG...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGTTGGCCTCGAGGGCTaGAGCTGTCCCCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLVGLEG*SCPRGG
Trigger: GCCCCCTCGGGGACAGCTGCAGCCCTCGAGGCCAAC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GCAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTTGCCAGGCGGCCAGGTaGAGCTGTCCTTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AAVLGGPATLCTCATLWACQAAR*SCPWRA
Trigger: GGCCCGCCAAGGACAGCTGCACCTGGCCGCCTGGCA...AGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGTCCTTGGTGGGGAGGTaGGCCCGGCTCGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLSLVGR*ARLGGR
Trigger: CCTGCCACCGAGCCGGGCCCACCTCCCCACCAAGGA...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp TGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTGGGTCATCGGCGTCTGTGCCAGCTACTaGGGGGCAGGCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WRARDPLHLCHPLGWVIGVCASY*GAGWPG
Trigger: TCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGAC...GCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR GCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCCCAGGGCCACGCCAGTaGGTGGGGGCAGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGPGPRQ*VGAERR
Trigger: CCTCCGCTCTGCCCCCACGCACTGGCGTGGCCCTGG...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTGAGGCCTCCCGGGCCTaGCTGGGTCCTGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLEASRA*LGPEAG
Trigger: ACCGGCCTCAGGACCCAGGCAGGCCCGGGAGGCCTC...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGGATCCAGCCGGCCTGTaGGCAGGAGGGGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTEDPAGL*AGGACC
Trigger: GCAGCAGGCCCCTCCTGCGCACAGGCCGGCTGGATC...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTCTGCGCTGCCGCGCCTaGCGGATGATGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASLRCRA*RMMARL
Trigger: CAGCCTGGCCATCATCCGGCAGGCGCGGCAGCGCAG...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGGCTGGGGGCAGACCCTaGCTTGGAGGACGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWAGGRP*LGGRGW
Trigger: CCAGCCACGTCCTCCAAGCCAGGGTCTGCCCCCAGC...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCTGGAGCAGCTGGCACTaGGCGCCGCGGGGACACGCC +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGWSSWH*APRGHA
Trigger: GGCGTGTCCCCGCGGCGCCCAGTGCCAGCTGCTCCA...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTGTACGGTGGAGCAGCTaGCACTGGGCGCCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASVRWSS*HWAPRG
Trigger: TCCCCGCGGCGCCCAGTGCCAGCTGCTCCACCGTAC...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCGAGACCCTGCTCCTaGCGGTTGCGTCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTEPRPCS*RLRRWA
Trigger: GGCCCAGCGACGCAACCGCCAGGAGCAGGGTCTCGG...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTCCTGGGCCCGTGGCTaGCCGAGACCCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASSWARG*PRPCSW
Trigger: CCAGGAGCAGGGTCTCGGCCAGCCACGGGCCCAGGA...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCCCCAGGTGAGGCTTaGTGGCGGGCGGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFPPGEA*WRAALL
Trigger: CAGGAGGGCCGCCCGCCACCAAGCCTCACCTGGGGG...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGGCGGTGGCGGCAGGTaGGGTGCCGCTTTTCTTGTC +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLGGGGR*GAAFLV
Trigger: GACAAGAAAAGCGGCACCTCACCTGCCGCCACCGCC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCGTCTCCGCCGGAGGCTaGGGTGGCTCTTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFVSAGG*GGSWRW
Trigger: CCACCGCCAAGAGCCACCTCAGCCTCCGGCGGAGAC...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCGCCGCGCCTGCCGGATaGTGGCCAGGCTGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPAAPAG*WPGCAA
Trigger: TGCAGCGCAGCCTGGCCATCATCCGGCAGGCGCGGC...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTGGGGCGCTGGGATGCTaGAGGCTTCCTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLGALGC*RLPGPV
Trigger: CACGGGCCCAGGAAGCCTTCAGCATCCCAGCGCCCC...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTGCAGGAGGGGCCTGCTaGCCGCATCACTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLAGGAC*PHHWAG
Trigger: GCCAGCCCAGTGATGCGGGCAGCAGGCCCCTCCTGC...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCACAGGCTGCGCTGCACTaGCCGGCTGGCCAGGGAACG +
Preference number: 4 (lower is better)
Translates to: GGRPSCGVEWWTEPLSSPQAALH*PAGQGT
Trigger: CGTTCCCTGGCCAGCCGGGCAGTGCAGCGCAGCCTG...TGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTCCTTCCTCTTCTCCCTaGGCTGCCGCGCCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASPSSSP*AAAPAG
Trigger: TCCGGCAGGCGCGGCAGCGCAGGGAGAAGAGGAAGG...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCCTGCTCCTGGCGGTTaGGTCGCTGGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPPAPGG*VAGPWG
Trigger: GCCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTGCCGAGCTGGGCGTCTaGCTGGTGGGGCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLAELGV*LVGRWD
Trigger: ATCCCAGCGCCCCACCAGGCAGACGCCCAGCTCGGC...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCCTCCCGGGCCTGCCTaGGTCCTGAGGCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPPPGPA*VLRPVW
Trigger: CCAGACCGGCCTCAGGACCCAGGCAGGCCCGGGAGG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCGCCGGAGGCTGAGGTaGCTCTTGGCGGTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TRPCAHAGHGRLRARQAERRRLR*LLAVAA
Trigger: TGCCGCCACCGCCAAGAGCCACCTCAGCCTCCGGCG...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCCCAGGTGAGGCTTGGTaGCGGGCGGCCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGPGEAW*RAALLW
Trigger: CCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTGG...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGTCGGGGACAGGCCTaGAGGCCAGCCCTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGSRGQA*RPALPG
Trigger: GCCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACT...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp TGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTGGGTCATCGGCACCTGTGCCACCCTTTaGGCTGGGTCATCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WRARDPLHLCHPLGWVIGTCATL*AGSSAQ
Trigger: CTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGT...GCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp AGGTGCAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGAGGTGCAGCTGTCCTTaGCGGGCCCGCGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: RCSCPWRARDPLHLCHPLRCSCP*RARDPL
Trigger: CAGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCT...CAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR TCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCCAGCCACTCTGGGACTaGGGGCCCTCCGAGCAACCC +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGQPLWD*GPSEQP
Trigger: GGGTTGCTCGGAGGGCCCTCAGTCCCAGAGTGGCTG...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTCTGCCACCCAGAAGCTaGTGGGGTACCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLLPPRS*WGTRGR
Trigger: CCGGCCCCTGGTACCCCAGCAGCTTCTGGGTGGCAG...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCCACTGTGTCCTACTaGTGGTCTGTCCCCCGACGG +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLATVSY*WSVPRR
Trigger: CCGTCGGGGGACAGACCAGCAGTAGGACACAGTGGC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCAGTCCGCACGGCATaGAGGCTGGACGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLAVRTA*RLDASL
Trigger: CAAGGAAGCGTCCAGCCTGCATGCCGTGCGGACTGC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTGCGCAGGAGGGGCCTaGTGCCCGCATCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLCAGGA*CPHHWA
Trigger: AGCCCAGTGATGCGGGCAGCAGGCCCCTCCTGCGCA...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGGCGGGGGACGTGGCTaGCCGCCGACTGTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVGGGRG*PPTVAF
Trigger: AAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCC...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGGCTGGCCGAGACCCTaGTCCTGGCGGTTGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVGWPRP*SWRLRR
Trigger: GCGACGCAACCGCCAGGAGCAGGGTCTCGGCCAGCC...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGTGCAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGACCCTCTGCACCTGTaGCACCCTTTGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GAAVLGGPATLCTCATLWDPLHL*HPLGWV
Trigger: GACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTC...CCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR GCA 90 bp TGGGACTTCATGGCCCCGGAGTGCCGAGTTCAGCTCGTCCGGCAGAGGTGCCAGGGGCCCGCGACCCTCTaGACCTGTGCCACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: WDFMAPECRVQLVRQRCQGPATL*TCATLW
Trigger: CCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCC...CTGGCACCTCTGCCGGACGAGCTGAACTCGGCACTCCGGGGCCATGAAGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCCACCCAGAAGCTGCTaGGGTACCAGGGGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPPPRSC*GTRGRG
Trigger: GCCCCGGCCCCTGGTACCCCAGCAGCTTCTGGGTGG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCGGCCACGCCAGTGCGTaGGGGCAGAGCGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPGHASA*GQSGGW
Trigger: CCATCCTCCGCTCTGCCCCCACGCACTGGCGTGGCC...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGAGAGCTGGGAGGCATaGTCCTTGCTGCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLESWEA*SLLLAS
Trigger: GGAGGCCAGCAGCAAGGACCATGCCTCCCAGCTCTC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCTGGACGCTTCCTTGGTaGGGAGGTGGGCCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFWTLPW*GGGPGS
Trigger: CGAGCCGGGCCCACCTCCCCACCAAGGAAGCGTCCA...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGGGCTGGACGCTTCCTTaGTGGGGAGGTGGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRGWTLP*WGGGPG
Trigger: GCCGGGCCCACCTCCCCACCAAGGAAGCGTCCAGCC...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCACGGCATGCAGGCTaGACGCTTCCTTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLARHAG*TLPWWG
Trigger: TCCCCACCAAGGAAGCGTCCAGCCTGCATGCCGTGC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTACCCCCGCTGGCAACTaGACGCAGGCGGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASTPAGN*TQAVQH
Trigger: GTGCTGAACCGCCTGCGTCCAGTTGCCAGCGGGGGT...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCGCTGCACTGCCCGGCTaGCCAGGGAACGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSAALPG*PGNGYS
Trigger: GCTGTAGCCGTTCCCTGGCCAGCCGGGCAGTGCAGC...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCCCTGCGCACACGCTaGTCATGGAAGGTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLALRTR*SWKVEG
Trigger: GCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGGGCCACTGTTGCCAATaGCAGTCGGGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWGHCCQ*QSGTGL
Trigger: CAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGTCAAGGACATGCTGCTaGGGGACAGGAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTESRTCC*GTGGWP
Trigger: GGGCCAGCCTCCTGTCCCGCAGCAGCATGTCCTTGA...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGGCTGTCGCCCACACTaGCCACTGACTTCACCATCC +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLGCRPH*PLTSPS
Trigger: GGATGGTGAAGTCAGTGGGCAGTGTGGGCGACAGCC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGAGGCATGGTCCTTGCTaGTGGCCTCCGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWRHGPC*WPPTAN
Trigger: GTTGGCAGTCGGAGGCCAGCAGCAAGGACCATGCCT...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTCACCTTGCTGGTGGGTaGAGTCCGCACGGCATGCAG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASHLAGG*SPHGMQ
Trigger: CTGCATGCCGTGCGGACTGCACCCACCAGCAAGGTG...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTTGGGCAGTGGGGAGGTaGAGCCACGGCAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVWAVGR*SHGSRS
Trigger: ACTGCGGCTGCCGTGGCTGCACCTCCCCACTGCCCA...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CGACCCTCTGCACCTGTGCCACCCTTTGGGCTGGGTCATCGGCCCAGGACCCACGCTGGCCAGGAATCCTaGCTAGGCCCTCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: RPSAPVPPFGLGHRPRTHAGQES*LGPQGP
Trigger: GGGTCCTTGAGGGCCTAGGCAGGATTCCTGGCCAGC...GTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR GCA 90 bp GCAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTGACCCACTCTGTCTGTaGCAGCTACTGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AAVLGGPATLCTCATLWADPLCL*QLLRGR
Trigger: CCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTC...AGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCGTAGCCCCTCCGGCTTaGACGAGGGTAGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSVAPPA*TRVAGT
Trigger: AGTGCCCGCTACCCTCGTCCAAGCCGGAGGGGCTAC...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGAACGGCCGCACAGCATaGTCGGCAGGAGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTENGRTA*SAGGSE
Trigger: CTCAGACCCTCCTGCCGACCATGCTGTGCGGCCGTT...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCCCCCTGGCTCTTGTTaGCCTCGAGGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TRPCAHAGHGRLRARQAEPPGSC*PRGLQL
Trigger: CAGCTGCAGCCCTCGAGGCCAACAAGAGCCAGGGGG...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCTGGCTTGGAGGACGTaGCTGGCTTCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTELAWRT*LASWAW
Trigger: CCAAGCCCAGGAAGCCAGCCACGTCCTCCAAGCCAG...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCGGGCAGACCCTGGCTTaGAGGACGTGGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFGQTLA*RTWLAS
Trigger: GGAAGCCAGCCACGTCCTCCAAGCCAGGGTCTGCCC...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTTTCCCACCCCCGCTaGCAACTGGACGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFLSHPR*QLDAGG
Trigger: ACCGCCTGCGTCCAGTTGCCAGCGGGGGTGGGAAAG...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCAAGGGGAGCCCGGTTaGGCTTTCCCACCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPQGEPG*AFPPPL
Trigger: CAGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCGTTTCTGGGTACGGTaGAGCAGCTGGCACTGGGCG +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTERFWVR*SSWHWA
Trigger: CGCCCAGTGCCAGCTGCTCCACCGTACCCAGAAACG...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGCGACTGTGGCGTTTCTaGGTACGGTGGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLRLWRF*VRWSSW
Trigger: CCAGCTGCTCCACCGTACCCAGAAACGCCACAGTCG...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCTGGGCGTCTGCCTGGTaGGGCGCTGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGWASAW*GAGMLK
Trigger: CTTCAGCATCCCAGCGCCCCACCAGGCAGACGCCCA...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCGTGCAGGCCGGTCCCTaGGGTCCTCACAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFVQAGP*GPHRRG
Trigger: ACCACGTCTGTGAGGACCCCAGGGACCGGCCTGCAC...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCGGGAGGCCTGGCCAGTaGCCTCTTCACTGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFGRPGQ*PLHWAE
Trigger: TTCGGCCCAGTGAAGAGGCCACTGGCCAGGCCTCCC...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTGTGCCACCCTTTGGGCTaGGTCATCGGCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GSSAQDPLCLCQLLRGRLCHPLG*VIGPGP
Trigger: GGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCA...CAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR TCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGCAGCTGGCCACGGAATaGGAACCCAGCTTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRQLATE*EPSFRP
Trigger: GGGCCGGAAGCTGGGTTCTCATTCCGTGGCCAGCTG...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGTGCGGTAGCGGGTCTTaGTCACCTTGCTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTECGSGS*SPCWWV
Trigger: CACCCACCAGCAAGGTGATCAAGACCCGCTACCGCA...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCCAAGGATGAGGGTCTaGGGTAGGTGCAGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSPRMRV*GRCRPV
Trigger: GACCGGCCTGCACCTACCTCAGACCCTCATCCTTGG...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCTCTCAAGGACATGCTaGTGCGGGACAGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTELSRTC*CGTGGW
Trigger: CCAGCCTCCTGTCCCGCAGCAGCATGTCCTTGAGAG...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCGGGAGGCATGGTCCTTaGTGCTGGCCTCCGACTGCC +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPGRHGP*CWPPTA
Trigger: GGCAGTCGGAGGCCAGCAGCAAGGACCATGCCTCCC...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGGGGAACGGCTACAGCTaGCTGCAGGATCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRGNGYS*LQDPAG
Trigger: GCCGGCTGGATCCTGCAGGCAGCTGTAGCCGTTCCC...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCAGCGCTCGCCACGGTTaGACCTGCCGAAGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSSARHG*TCRSGC
Trigger: ACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCT...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAGGGCTCGGCGAGGACTaGAGGGAGATGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GGRPSCGVEWWTEPLSSPGLGED*REMKEG
Trigger: GCCTTCCTTCATCTCCCTGCAGTCCTCGCCGAGCCC...TGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTTCCAAAGAGCCCCGCTaGGCCCCTGAGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVSKEPR*APEALA
Trigger: TGCCAGTGCCTCAGGGGCCCAGCGGGGCTCTTTGGA...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCTTCCCGGGGCCTTTaGTCACTCCAGGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFPSRGL*SLQGVS
Trigger: GGAAACCCCCTGGAGTGACCAAAGGCCCCGGGAAGG...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCACACTGCAGGTCCCCCTaGCTCTTGTTGGCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: GGRPSCGVEWWTEPLSSPHCRSP*LLLASR
Trigger: CCTCGAGGCCAACAAGAGCCAGGGGGACCTGCAGTG...TGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCGGGCAGAGCGGAGGATaGGAAGCTCGCCTTGACGGC +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPGQSGG*EARLDG
Trigger: GCCGTCAAGGCGAGCTTCCCATCCTCCGCTCTGCCC...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCTGTGGAGCACAGCTaGCCACGGAATGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLAVEHS*PRNENP
Trigger: TGGGTTCTCATTCCGTGGCCAGCTGTGCTCCACAGC...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCTTGGAGGACGTGGCTaGCTTCCTGGGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSLGGRG*LPGLGL
Trigger: GAGCCCAAGCCCAGGAAGCCAGCCACGTCCTCCAAG...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGTCCACTTGTACTTGCTaGGGGCAGACCCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLSTCTC*GQTLAW
Trigger: CCAAGCCAGGGTCTGCCCCCAGCAAGTACAAGTGGA...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTAGGACTGGGGAGAGCTaGGAGGCATGGTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASRTGES*EAWSLL
Trigger: CAGCAAGGACCATGCCTCCCAGCTCTCCCCAGTCCT...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTGGACCTAGACAGGACTaGGGAGAGCTGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASGPRQD*GELGGM
Trigger: CATGCCTCCCAGCTCTCCCCAGTCCTGTCTAGGTCC...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTACTGTGTCCTACTGCTaGTCTGTCCCCCGACGGGGA +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASTVSYC*SVPRRG
Trigger: TCCCCGTCGGGGGACAGACCAGCAGTAGGACACAGT...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGTCAGCACCAGGGACCTaGATAGTGAGAGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: TRPCAHAGHGRLRARQAESAPGT*IVRAAG
Trigger: CCCGGCGGCTCTCACTATCCAGGTCCCTGGTGCTGA...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGGCTTGCAGAGCCTGTTaGAGCACGCTGCTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWACRAC*STLLLR
Trigger: CCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGC...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCGGGCGGCCCTCCTGTaGGGTAGAGTGGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPRAALL*GRVVDR
Trigger: TCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTCAGTGGCCTCTTCACTaGGCCGAAAACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASQWPLH*AENLGG
Trigger: CCCACCCAGGTTTTCGGCCCAGTGAAGAGGCCACTG...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCCTGCCTGGGAGGCCTaGCCAGTGGCCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPPAWEA*PVASSL
Trigger: CAGTGAAGAGGCCACTGGCCAGGCCTCCCAGGCAGG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCTTTGGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGCCCACTCCCAGGCCCTaGGACAGCCCCTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: PLGWVIGPGPTLSVPATEPTPRP*DSPSED
Trigger: GTCTTCGGAGGGGCTGTCCCAGGGCCTGGGAGTGGG...CTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR TCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGCGTTCTGACCCTGACTaGGCTGGACCTGTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLRSDPD*AGPVSQ
Trigger: TTGAGAGACAGGTCCAGCTCAGTCAGGGTCAGAACG...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCAATCACACTCTCACTaGCTGTCCGGCGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPQSHSH*LSGGAP
Trigger: GGGAGCCCCGCCGGACAGTCAGTGAGAGTGTGATTG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCGCTCTGGGTCAGCTATaGGCTGCGGCTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGALGQL*AAASPP
Trigger: AGGTGGAGAAGCCGCAGCTCATAGCTGACCCAGAGC...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCAGGCCGGCGTCTTCTTaGCAATGCGGTAGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSRPASS*QCGSGS
Trigger: AGACCCGCTACCGCATTGTCAAGAAGACGCCGGCCT...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCGGGGGCAGTAGCCTTTaGGGAAGTCGCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGGGSSL*GSRCRP
Trigger: AGGTCTGCAGCGACTTCCTCAAAGGCTACTGCCCCC...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GCAGCTGTCCTTGGCGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTCCTGGAAAGGCGTGGTaGCCTCAGCAAACTTCATGC +
Preference number: 4 (lower is better)
Translates to: AAVLGGPATLCTCATLWAPGKAW*PQQTSC
Trigger: GCATGAAGTTTGCTGAGGTCACCACGCCTTTCCAGG...AGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCGCCAAGGACAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTGAGGATCTTCCACACTaGAGGTCCCCCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASEDLPH*RSPWLL
Trigger: CAAGAGCCAGGGGGACCTGCAGTGTGGAAGATCCTC...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTAGGCGACATAGTCGGTaGGTGGTGACCTGTACCAGG +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASRRHSR*VVTCTR
Trigger: CCTGGTACAGGTCACCACGCACCGACTATGTCGCCT...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGAGGACCCCTCCGATaGAGCGGTAGCCTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GGRPSCGVEWWTEPLSSPRGPLR*SGSLCS
Trigger: GGAGCAAAGGCTACCGCTGCATCGGAGGGGTCCTCT...TGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTCGCCACGGTTGCACCTaGCGAAGCGGTTGTAGTACA +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASRHGCT*RSGCST
Trigger: TGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCG...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTCCCGGACAAACCTGGTaGACACGGCCACCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVPGQTW*TRPPSR
Trigger: CCGAGAAGGTGGCCGTGTGCACCAGGTTTGTCCGGG...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCGTTTTCTTGCAGGTaGCCCGGACAAACCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTEPFSCR*PGQTWC
Trigger: GCACCAGGTTTGTCCGGGGCACCTGCAAGAAAACGG...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGTCCCATCCGTTTTCTTaGAGGTGCCCCGGACAAACC +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLSHPFS*RCPGQT
Trigger: GGTTTGTCCGGGGCACCTGCAAGAAAACGGATGGGA...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTTGCAGACCTCGGCCTTaGGGGACACGTACACGTGGC +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVCRPRP*GTRTRG
Trigger: GCCACGTGTACGTGTCCCGCAAGGCCGAGGTCTGCA...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTCTCCTGGAGAGATGGTaGCTCGTGGTCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASLLERW*LVVQGS
Trigger: GCTTCCTTGGACCACGAGGCACCATCTCTCCAGGAG...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCTGCAGGGCCACTGTTaGCAATGGCAGTCGGGGACA +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSLQGHC*QWQSGT
Trigger: TGTCCCCGACTGCCATTGGCAACAGTGGCCCTGCAG...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCGGGCCCCTGAGGCACTaGCAGAGCCAGACTTTGATG +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFGPLRH*QSQTLM
Trigger: CATCAAAGTCTGGCTCTGCCAGTGCCTCAGGGGCCC...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGCCTGGGCTTGGGCTCTaGGTCAGCTATGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRPGLGL*VSYELR
Trigger: CCGCAGCTCATAGCTGACCCAGAGCCCAAGCCCAGG...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGAGGAGGCAGAGGGGCTaGAGGCCTTCCACTTGTACT +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTERRQRG*RPSTCT
Trigger: AGTACAAGTGGAAGGCCTCCAGCCCCTCTGCCTCCT...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCATGGTCCTTGCTGCTaGCCTCCGACTGCCAACGGA +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSHGPCC*PPTANG
Trigger: TCCGTTGGCAGTCGGAGGCCAGCAGCAAGGACCATG...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCTGCCCCGGACAAACCTaGTGCACACGGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFCPGQT*CTRPPS
Trigger: AGAAGGTGGCCGTGTGCACCAGGTTTGTCCGGGGCA...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTTGCCTGGTGGGGCGCTaGGATGCTGAAGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVCLVGR*DAEGFL
Trigger: CAGGAAGCCTTCAGCATCCCAGCGCCCCACCAGGCA...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCAGAGATGGTGCCTCGTaGTCCAAGGAAGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSRDGAS*SKEAGG
Trigger: CCCTCCCGCTTCCTTGGACCACGAGGCACCATCTCT...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCGCTAAGGCAGCCTCCTaGAGAGATGGTGCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGAKAAS*RDGASW
Trigger: CCACGAGGCACCATCTCTCCAGGAGGCTGCCTTAGC...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCCAGACGGAACTGGCTaGTCTGTGTGGCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TRPCAHAGHGRLRARQAEPDGTG*SVWPAS
Trigger: AGATGCTGGCCACACAGATCAGCCAGTTCCGTCTGG...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTGCTGCGTCTCCGGATaGTCTTGGTGCGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLCCVSG*SWCGSS
Trigger: TGAAGAGCCGCACCAAGATCATCCGGAGACGCAGCA...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCATAGTCGGTGCGTGGTaGCCTGTACCAGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFIVGAW*PVPGPC
Trigger: ACAAGGGCCTGGTACAGGTCACCACGCACCGACTAT...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTGTCTCTCAAGGACATaGTGCTGCGGGACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSCLSRT*CCGTGG
Trigger: GCCTCCTGTCCCGCAGCAGCATGTCCTTGAGAGACA...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTGCCAGCAGAGGCCTTaGACACATTCTCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASCQQRP*THSLQP
Trigger: TGGCTGCAGAGAATGTGTGCAAGGCCTCTGCTGGCA...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGCTTCTCCACCTTGTTTaGCATGCCAGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLLLHLV*HASRGL
Trigger: AAGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAG...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCCTTCCACTTGTACTTaGTGGGGGCAGACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFPSTCT*WGQTLA
Trigger: AGCCAGGGTCTGCCCCCAGCAAGTACAAGTGGAAGG...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGCTGCTGGCCTCCGACTaGCAACGGAAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRLLASD*QRKEEE
Trigger: CTCTTCCTCCTTCCGTTGGCAGTCGGAGGCCAGCAG...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGAGGAAGACCAGGCCCTaGGCACACGCTGGTCATGGA +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRRKTRP*AHAGHG
Trigger: TCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCT...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCTTTGGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGTTCATGGCCCCGGAGTaGCGAGTTCAGCTCGTCCGG +
Preference number: 4 (lower is better)
Translates to: PLGWVIGPGPTLSVPATEFMAPE*RVQLVR
Trigger: CCGGACGAGCTGAACTCGGCACTCCGGGGCCATGAA...CTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCACTGTGGTAAGTGGGTaGCTGCCACCCAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFTVVSG*LPPRSC
Trigger: GCAGCTTCTGGGTGGCAGCCACCCACTTACCACAGT...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCTCCTTGGACACATGGTaGGAGAAGGGGCAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFSLDTW*EKGQVP
Trigger: TGGGACCTGCCCCTTCTCCCACCATGTGTCCAAGGA...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCAGCCTCCTGGAGAGATaGTGCCTCGTGGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: AWWRAALLWGRVVDRASFSLLER*CLVVQG
Trigger: TCCTTGGACCACGAGGCACCATCTCTCCAGGAGGCT...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGTCCTGTGGGGTAGAGTaGTGGACAGAGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTESCGVE*WTEPLS
Trigger: GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGA...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGGAGGCCAGCCCTGCCTaGCACCCTGGAAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMREASPA*HPGRWW
Trigger: CCACCACCTTCCAGGGTGCCAGGCAGGGCTGGCCTC...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CGGGCCCGCGACCCTCTGCACCTGTGCCACCCTTTGGGCTGGGTCATCGGCCCACCCTTGCAAGGACAGTaGTATCTGGATAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: RARDPLHLCHPLGWVIGPPLQGQ*YLDSES
Trigger: GCTCTCACTATCCAGATACCACTGTCCTTGCAAGGG...TGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGCAGAGGGTCGCGGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR TCA 90 bp GGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAATGGGAAGCTCGCCTTaGCGGCAATCACACTCTCAC +
Preference number: 4 (lower is better)
Translates to: GGRPSCGVEWWTEPLSSPMGSSP*RQSHSH
Trigger: GTGAGAGTGTGATTGCCGTCAAGGCGAGCTTCCCAT...TGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGTTTCCTCTCCAAGGATaGGGGTCTGAGGTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTEFPLQG*GSEVGA
Trigger: TGCACCTACCTCAGACCCTCATCCTTGGAGAGGAAA...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCCGAGGGAGTATTTCTTaGGCCACGAAGGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGRGSIS*ATKAHG
Trigger: ACCATGGGCCTTCGTGGCGCAAGAAATACTCCCTCG...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGTGGCGGCAGGTGAGGTaGCGCTTTTCTTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRWRQVR*RFSCLQ
Trigger: CTGGAGACAAGAAAAGCGGCACCTCACCTGCCGCCA...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGCTCTTCTCCCTGCGCTaGCGCGCCTGCCGGATGATG +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRLFSLR*RACRMM
Trigger: CATCATCCGGCAGGCGCGGCAGCGCAGGGAGAAGAG...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTTCTTCTTGCACTTTaGACCCAGGGGGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASFLLAL*TQGAVA
Trigger: GGCTACTGCCCCCTGGGTGCAAAGTGCAAGAAGAAA...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGTGCCACTGTGGTAAGTaGGTGGCTGCCACCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRCHCGK*VAATQK
Trigger: CTTCTGGGTGGCAGCCACCCACTTACCACAGTGGCA...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTCTGACTTCACCATCCTaGGCTTACCAGGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASLTSPS*AYQAPS
Trigger: AGAAGGAGCCTGGTAAGCCCAGGATGGTGAAGTCAG...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGGTACCAGGCCCTTGTTaGGGGTCTTCTTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: TRPCAHAGHGRLRARQAEVPGPC*GSSSGQ
Trigger: CTGTCCTGAAGAAGACCCCCAACAAGGGCCTGGTAC...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGCCCGCATCACTGGGCTaGCCGGAGGTCTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRPASLG*PEVLES
Trigger: GCTCTCCAAGACCTCCGGCCAGCCCAGTGATGCGGG...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGTGCTGCCCGCATCACTaGGCTGGCCGGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRCCPHH*AGRRSW
Trigger: CCAAGACCTCCGGCCAGCCCAGTGATGCGGGCAGCA...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGGCTGCCCGCCGACTGTaGCGTTTCTGGGTACGGTGG +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRAARRL*RFWVRW
Trigger: CCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGC...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTGGGTCCTCACAGACGTaGTTTGATGTGCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASGSSQT*FDVQRL
Trigger: AAGCCTCTGCACATCAAACCACGTCTGTGAGGACCC...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTGGCCAGGAAAAGGACAGTGGTATCTaGATAGTGAGAGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GPGPTLSVPATEGQAGQEKDSGI*IVRAAG
Trigger: CCCGGCGGCTCTCACTATCCAGATACCACTGTCCTT...TTCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp GGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTGGCCAGGAAATTAGTGGGACTTCATaGCCCCGGAGTGCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: GPGPTLSVPATEGQAGQEISGTS*PRSAEF
Trigger: GAACTCGGCACTCCGGGGCCATGAAGTCCCACTAAT...TTCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR GCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGTCATCAATCAGACCCTaGAGTAGGCGGATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRSSIRP*SRRICR
Trigger: GCGGCAGATCCGCCTACTGCAGGGTCTGATTGATGA...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGTGCAGCGGTAGCCTTTaGTCCGCCACCAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRCSGSL*SATKGS
Trigger: GCTCCCCTTGGTGGCGGAGCAAAGGCTACCGCTGCA...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGACGGCTACAGCTGCCTaGAGGATCCAGCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRTATAA*RIQPAC
Trigger: ACAGGCCGGCTGGATCCTGCAGGCAGCTGTAGCCGT...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTGCTGTTGCTGCAGATaGCCTTCAGGAAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLCCCCR*PSGSRS
Trigger: GCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCA...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTAGGGACAGTTGCTGTTaGTGCAGATGCCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLRDSCC*CRCPSG
Trigger: TCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCT...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGGGCTATAGGGACAGTTaGTGTTGCTGCAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: TRPCAHAGHGRLRARQAEGYRDS*CCCRCP
Trigger: AGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCC...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCAGACGTGGTTTGATGTaGAGAGGCTTCCCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGGGRPSCGVEWWTEPLSRRGLM*RGFPES
Trigger: GGACTCAGGGAAGCCTCTGCACATCAAACCACGTCT...GGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGGCTGGCCGGAGGTCTTaGAGAGCTTGTTGGCAGATA +
Preference number: 4 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRAGRRS*RACWQI
Trigger: TATCTGCCAACAAGCTCTCCAAGACCTCCGGCCAGC...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTCCGGCATCTTCTCCTTaGACACATGGTGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVPASSP*THGGRR
Trigger: CCTTCTCCCACCATGTGTCCAAGGAGAAGATGCCGG...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGATGCTGAAGGCTTCCTaGGCCCGTGGCTGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRMLKAS*ARGWPR
Trigger: TCTCGGCCAGCCACGGGCCCAGGAAGCCTTCAGCAT...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR TCA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTGGCAGAGCCAGACTTTaGTGGCGGTTTAACTTTGAT +
Preference number: 4 (lower is better)
Translates to: EAWWRAALLWGRVVDRASGRARL*WRFNFD
Trigger: ATCAAAGTTAAACCGCCATCAAAGTCTGGCTCTGCC...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCATGCAGTAGGCGGATCTaGCGCCGTAATATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GGRPSCGVEWWTEPLSSPCSRRI*RRNISF
Trigger: AAAGGAGATATTACGGCGGCAGATCCGCCTACTGCA...TGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGGGTCAGCTATGAGCTaGGGCTTCTCCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVGSAMS*GFSTLF
Trigger: AAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCC...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCGACAGTTGCTGTTGCTaGAGATGCCCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: EDQALRTRWSWKVEGQAGDSCCC*RCPSGS
Trigger: ACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTC...GCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp GCACCTGTGCCACCCTTTGGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTACTTCATGCGGCCCTTaGAAGGACAGTGGTATCTGG +
Preference number: 4 (lower is better)
Translates to: APVPPFGLGHRPRTHSVCTSCGP*KDSGIW
Trigger: CCAGATACCACTGTCCTTGCAAGGGCCGCATGAAGT...ACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR GCA 90 bp TGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTCCTCAGCAAACTTCATaGGGCCCTTGCAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: WVIGPGPTLSVPATEGQAPQQTS*GPCKDS
Trigger: ACTGTCCTTGCAAGGGCCGCATGAAGTTTGCTGAGG...AGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGCGCACACGCTGGTCATaGAAGGTTGAGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRRTRWS*KVEGQA
Trigger: TGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCG...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp TGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTGACCCCTCAGGTCACTaGTGTCTAAAGAGACTCACA +
Preference number: 4 (lower is better)
Translates to: WVIGPGPTLSVPATEGQADPSGH*CLKRLT
Trigger: TGTGAGTCTCTTTAGACAGCAGTGACCTGAGGGGTC...AGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS-3UTR CCA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTTTACCAGGCTCCTTCTaGCAGACCAGAAGAGGATCT +
Preference number: 4 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVLPGSF*QTRRGS
Trigger: AGATCCTCTTCTGGTCTGCCAGAAGGAGCCTGGTAA...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGCCACCTTGTTTGCCATaGCAGCAGAGGCCTTGCACA +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRPPCLP*QQRPCT
Trigger: TGTGCAAGGCCTCTGCTGGCATGGCAAACAAGGTGG...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR GCA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGAGCGGTTGTAGTACATaGAGTACTCCTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRPCAHAGHGRLRARQAESGCST*STPSSS
Trigger: AGAAGAGGAAGGAGTACTGCATGTACTACAACCGCT...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CCA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGTTCTCCTTGGACACATaGTGGGAGAAGGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRFSLDT*WEKGQV
Trigger: GACCTGCCCCTTCTCCCACCATGTGTCCAAGGAGAA...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 90 bp GCGTCGCTGGGCCCTGGGGCGGGGGACGTGGCTGCCCGCCGACTGTaGCGTTTCTGGGTACGGTGGAGCAGCTGGCACTGGGCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: ASLGPGAGDVAARRL*RFWVRWSSWHWAPR
Trigger: CCGCGGCGCCCAGTGCCAGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp GCTCCTGGCGGTTGCGTCGCTGGGCCCTGGGGCGGGGGACGTGGCTaGCCGCCGACTGTGGCGTTTCTGGGTACGGTGGAGCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: APGGCVAGPWGGGRG*PPTVAFLGTVEQLA
Trigger: TGCCAGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 90 bp CCCTGCTCCTGGCGGTTGCGTCGCTGGGCCCTGGGGCGGGGGACGTaGCTGCCCGCCGACTGTGGCGTTTCTGGGTACGGTGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PCSWRLRRWALGRGT*LPADCGVSGYGGAA
Trigger: AGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTCCCTGCTCCTGGCGGTaGCGTCGCTGGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLPCSWR*RRWALG
Trigger: CCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGGG...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGAGTAGCCCCTCCGGCTaGGACGAGGGTAGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWSSPSG*DEGSGH
Trigger: GTGCCCGCTACCCTCGTCCAAGCCGGAGGGGCTACT...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGGGGGCAGACCCTGGCTaGGAGGACGTGGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTEGADPG*EDVAGF
Trigger: GAAGCCAGCCACGTCCTCCAAGCCAGGGTCTGCCCC...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTAGGCTGAGGTGGCTCTaGGCGGTGGCGGCAGGTGAG +
Preference number: 5 (lower is better)
Translates to: EAWWRAALLWGRVVDRASRLRWL*AVAAGE
Trigger: CTCACCTGCCGCCACCGCCAAGAGCCACCTCAGCCT...AGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCAGGCTGGACGCTTCCTaGGTGGGGAGGTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: AWWRAALLWGRVVDRASFRLDAS*VGRWAR
Trigger: CCGGGCCCACCTCCCCACCAAGGAAGCGTCCAGCCT...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTCCAAGGGGAGCCCGGTaGGGCTTTCCCACCCCCGCT +
Preference number: 5 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLPRGAR*GFPTPA
Trigger: AGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTGG...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGCTGCAGACCTCGGCCTaGCGGGACACGTACACGTGG +
Preference number: 5 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLLQTSA*RDTYTW
Trigger: CCACGTGTACGTGTCCCGCAAGGCCGAGGTCTGCAG...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 90 bp GGGCTGCTCTTCCCCCTGAGGGCCTGTCTCCGCCGGAGGCTGAGGTaGCTCTTGGCGGTGGCGGCAGGTGAGGTGCCGCTTTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GLLFPLRACLRRRLR*LLAVAAGEVPLFLS
Trigger: AGACAAGAAAAGCGGCACCTCACCTGCCGCCACCGCCAAGAGCCACCTCAGCCTCCGGCGGAGACAGGCCCTCAGGGGGAAGAGCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 90 bp TGCTCCGCCACCAAGGGGAGCCCGGTTGGGCTTTCCCACCCCCGCTaGCAACTGGACGCAGGCGGTTCAGCACCAGGGACCTGGATAGTG +
Preference number: 5 (lower is better)
Translates to: CSATKGSPVGLSHPR*QLDAGGSAPGTWIV
Trigger: CACTATCCAGGTCCCTGGTGCTGAACCGCCTGCGTCCAGTTGCCAGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTGGTGGCGGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CAGGCTGGCCAGGAATCCTGCCTAGGCCCTCAAGGACCCCTCAGGTCACTGCTGCAGGTGCAGCTGTCCTaGGCGGGCCCGCGACCCTCT +
Preference number: 5 (lower is better)
Translates to: QAGQESCLGPQGPLRSLLQVQLS*AGPRPS
Trigger: AGAGGGTCGCGGGCCCGCCAAGGACAGCTGCACCTG...CAGCAGTGACCTGAGGGGTCCTTGAGGGCCTAGGCAGGATTCCTGGCCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS TCA 90 bp GGAGGTGGGCCCGGCTCGGTGGCAGGCGACATAGTCGGTGCGTGGTaGCCTGTACCAGGCCCTTGTTGGGGGTCTTCTTCAGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: GGGPGSVAGDIVGAW*PVPGPCWGSSSGQG
Trigger: GCCCTGTCCTGAAGAAGACCCCCAACAAGGGCCTGGTACAGGTCACCACGCACCGACTATGTCGCCTGCCACCGAGCCGGGCCCACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 90 bp CTTCCGGCCCAGGGCCACGCCAGTGCGTGGGGGCAGAGCGGAGGATaGGAAGCTCGCCTTGACGGCAATCACACTCTCACTGACTGTCCG +
Preference number: 5 (lower is better)
Translates to: LPAQGHASAWGQSGG*EARLDGNHTLTDCP
Trigger: CGGACAGTCAGTGAGAGTGTGATTGCCGTCAAGGCGAGCTTCCCATCCTCCGCTCTGCCCCCACGCACTGGCGTGGCCCTGGGCCGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 90 bp CACGGAATGAGAACCCAGCTTCCGGCCCAGGGCCACGCCAGTGCGTaGGGGCAGAGCGGAGGATGGGAAGCTCGCCTTGACGGCAATCAC +
Preference number: 5 (lower is better)
Translates to: HGMRTQLPAQGHASA*GQSGGWEARLDGNH
Trigger: GTGATTGCCGTCAAGGCGAGCTTCCCATCCTCCGCTCTGCCCCCACGCACTGGCGTGGCCCTGGGCCGGAAGCTGGGTTCTCATTCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS-3UTR CAA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGTCCCCCTGGCTCTTGTaGGCCTCGAGGGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TRPCAHAGHGRLRARQAESPWLL*ASRAAA
Trigger: AGCTGCAGCCCTCGAGGCCAACAAGAGCCAGGGGGA...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCAGGTCCCCCTGGCTCTaGTTGGCCTCGAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: AWWRAALLWGRVVDRASFRSPWL*LASRAA
Trigger: TGCAGCCCTCGAGGCCAACAAGAGCCAGGGGGACCT...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCCAGCGCTCGCCACGGTaGCACCTGCCGAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPQRSPR*HLPKRL
Trigger: CAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTG...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTGGCCAGGAACACCTGTGCCACCCTTaGGGCTGGGTCATCGGCCCA +
Preference number: 5 (lower is better)
Translates to: GPGPTLSVPATEGQAGQEHLCHP*GWVIGP
Trigger: TGGGCCGATGACCCAGCCCAAAGGGTGGCACAGGTG...TTCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS TCA 90 bp CTGTCTCCGCCGGAGGCTGAGGTGGCTCTTGGCGGTGGCGGCAGGTaGGGTGCCGCTTTTCTTGTCTCCAGGAAGGCTTGTGCTGCTGCG +
Preference number: 5 (lower is better)
Translates to: LSPPEAEVALGGGGR*GAAFLVSRKACAAA
Trigger: CGCAGCAGCACAAGCCTTCCTGGAGACAAGAAAAGCGGCACCTCACCTGCCGCCACCGCCAAGAGCCACCTCAGCCTCCGGCGGAGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 90 bp TTGGTGGGGAGGTGGGCCCGGCTCGGTGGCAGGCGACATAGTCGGTaGGTGGTGACCTGTACCAGGCCCTTGTTGGGGGTCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LVGRWARLGGRRHSR*VVTCTRPLLGVFFR
Trigger: CCTGAAGAAGACCCCCAACAAGGGCCTGGTACAGGTCACCACGCACCGACTATGTCGCCTGCCACCGAGCCGGGCCCACCTCCCCACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 90 bp GGCAGCGCTCGCCACGGTTGCACCTGCCGAAGCGGTTGTAGTACATaGAGTACTCCTTCCTCTTCTCCCTGCGCTGCCGCGCCTGCCGGA +
Preference number: 5 (lower is better)
Translates to: GSARHGCTCRSGCST*STPSSSPCAAAPAG
Trigger: TCCGGCAGGCGCGGCAGCGCAGGGAGAAGAGGAAGGAGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 90 bp GTGTCCTACTGCTGGTCTGTCCCCCGACGGGGACCTAGACAGGACTaGGGAGAGCTGGGAGGCATGGTCCTTGCTGCTGGCCTCCGACTG +
Preference number: 5 (lower is better)
Translates to: VSYCWSVPRRGPRQD*GELGGMVLAAGLRL
Trigger: CAGTCGGAGGCCAGCAGCAAGGACCATGCCTCCCAGCTCTCCCCAGTCCTGTCTAGGTCCCCGTCGGGGGACAGACCAGCAGTAGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS-3UTR CAA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGACGAGGGAGTATTTCTaGCGCCACGAAGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWTREYF*RHEGPW
Trigger: CCATGGGCCTTCGTGGCGCAAGAAATACTCCCTCGT...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGACCTTCCCGGGGCCTTaGGTCACTCCAGGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: TRPCAHAGHGRLRARQAETFPGP*VTPGGF
Trigger: GAAACCCCCTGGAGTGACCAAAGGCCCCGGGAAGGT...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGTGCGGCTTCTCCACCTaGTTTGCCATGCCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWCGFST*FAMPAE
Trigger: CTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCA...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCGGGTCTTGATCACCTaGCTGGTGGGTGCAGTCCGC +
Preference number: 5 (lower is better)
Translates to: AWWRAALLWGRVVDRASFRVLIT*LVGAVR
Trigger: GCGGACTGCACCCACCAGCAAGGTGATCAAGACCCG...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp GAGGGTCTGAGGGTCCCGGGGGCCGATTCACGAGGGAGTATTTCTTaGGCCACGAAGGCCCATGGTGGGAAGAGTAGCCCCTCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: EGLRVPGADSRGSIS*ATKAHGGKSSPSGL
Trigger: CAAGCCGGAGGGGCTACTCTTCCCACCATGGGCCTTCGTGGCGCAAGAAATACTCCCTCGTGAATCGGCCCCCGGGACCCTCAGACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 90 bp GATCCAGCCGGCCTGTGCGCAGGAGGGGCCTGCTGCCCGCATCACTaGGCTGGCCGGAGGTCTTGGAGAGCTTGTTGGCAGATACTTTGT +
Preference number: 5 (lower is better)
Translates to: DPAGLCAGGACCPHH*AGRRSWRACWQILC
Trigger: ACAAAGTATCTGCCAACAAGCTCTCCAAGACCTCCGGCCAGCCCAGTGATGCGGGCAGCAGGCCCCTCCTGCGCACAGGCCGGCTGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 90 bp GAGCACGCTGCTGCTAAGGCAGCCTCCTGGAGAGATGGTGCCTCGTaGTCCAAGGAAGCGGGAGGGGATGAGGAGGAGGAGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: EHAAAKAASWRDGAS*SKEAGGDEEEEEEE
Trigger: CTCCTCCTCCTCCTCCTCCTCATCCCCTCCCGCTTCCTTGGACCACGAGGCACCATCTCTCCAGGAGGCTGCCTTAGCAGCAGCGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGGCCTTCCACTTGTACTaGCTGGGGGCAGACCCTGGC +
Preference number: 5 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRAFHLY*LGADPG
Trigger: GCCAGGGTCTGCCCCCAGCAAGTACAAGTGGAAGGC...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGGCGTCTCCGGATGATCTaGGTGCGGCTCTTCACTTTG +
Preference number: 5 (lower is better)
Translates to: GHCCQWQSGTGLEASPAWRLRMI*VRLFTL
Trigger: CAAAGTGAAGAGCCGCACCAAGATCATCCGGAGACG...CCAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGGCCACTGTTGCCAATGGCAGTCGGGGACAGGCCTGGAGGCCAGCCCTGCCTGTGTACCAGGCCCTTGTaGGGGGTCTTCTTCAGGACA +
Preference number: 5 (lower is better)
Translates to: GPLLPMAVGDRPGGQPCLCTRPL*GVFFRT
Trigger: TGTCCTGAAGAAGACCCCCAACAAGGGCCTGGTACA...CAGGCAGGGCTGGCCTCCAGGCCTGTCCCCGACTGCCATTGGCAACAGTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 90 bp CCACTTGTACTTGCTGGGGGCAGACCCTGGCTTGGAGGACGTGGCTaGCTTCCTGGGCTTGGGCTCTGGGTCAGCTATGAGCTGCGGCTT +
Preference number: 5 (lower is better)
Translates to: PLVLAGGRPWLGGRG*LPGLGLWVSYELRL
Trigger: AAGCCGCAGCTCATAGCTGACCCAGAGCCCAAGCCCAGGAAGCCAGCCACGTCCTCCAAGCCAGGGTCTGCCCCCAGCAAGTACAAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 90 bp GCAGGAGGGGCCTGCTGCCCGCATCACTGGGCTGGCCGGAGGTCTTaGAGAGCTTGTTGGCAGATACTTTGTAGAGGACCCCTCCGATGC +
Preference number: 5 (lower is better)
Translates to: AGGACCPHHWAGRRS*RACWQILCRGPLRC
Trigger: GCATCGGAGGGGTCCTCTACAAAGTATCTGCCAACAAGCTCTCCAAGACCTCCGGCCAGCCCAGTGATGCGGGCAGCAGGCCCCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTATGCCAGCAGAGGCCTaGCACACATTCTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLMPAEA*HTFSAA
Trigger: GGCTGCAGAGAATGTGTGCAAGGCCTCTGCTGGCAT...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CAGGTGAGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGGAGGTGCCGCTTTTCTaGTCTCCAGGAAGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: QVRLGGGRPSCGVEWWTEEVPLF*SPGRLV
Trigger: CACAAGCCTTCCTGGAGACAAGAAAAGCGGCACCTC...CTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCACCTGTACCAGGCCCTaGTTGGGGGTCTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AWWRAALLWGRVVDRASFTCTRP*LGVFFR
Trigger: CCTGAAGAAGACCCCCAACAAGGGCCTGGTACAGGT...GAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCGGCTGGCCGGAGGTCTaGGAGAGCTTGTTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPGWPEV*ESLLAD
Trigger: ATCTGCCAACAAGCTCTCCAAGACCTCCGGCCAGCC...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGGTCCCATCCGTTTTCTaGCAGGTGCCCCGGACAAAC +
Preference number: 5 (lower is better)
Translates to: TRPCAHAGHGRLRARQAEVPSVF*QVPRTN
Trigger: GTTTGTCCGGGGCACCTGCAAGAAAACGGATGGGAC...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 90 bp CTTGCGCCACGAAGGCCCATGGTGGGAAGAGTAGCCCCTCCGGCTTaGACGAGGGTAGCGGGCACTAAAGGCTCTGCCACTGTGGTAAGT +
Preference number: 5 (lower is better)
Translates to: LAPRRPMVGRVAPPA*TRVAGTKGSATVVS
Trigger: ACTTACCACAGTGGCAGAGCCTTTAGTGCCCGCTACCCTCGTCCAAGCCGGAGGGGCTACTCTTCCCACCATGGGCCTTCGTGGCGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 90 bp AGACCCTGGCTTGGAGGACGTGGCTGGCTTCCTGGGCTTGGGCTCTaGGTCAGCTATGAGCTGCGGCTTCTCCACCTTGTTTGCCATGCC +
Preference number: 5 (lower is better)
Translates to: RPWLGGRGWLPGLGL*VSYELRLLHLVCHA
Trigger: GGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCAGAGCCCAAGCCCAGGAAGCCAGCCACGTCCTCCAAGCCAGGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 90 bp AGCTTGCAGAGCCTGTTGGAGCACGCTGCTGCTAAGGCAGCCTCCTaGAGAGATGGTGCCTCGTGGTCCAAGGAAGCGGGAGGGGATGAG +
Preference number: 5 (lower is better)
Translates to: SLQSLLEHAAAKAAS*RDGASWSKEAGGDE
Trigger: CTCATCCCCTCCCGCTTCCTTGGACCACGAGGCACCATCTCTCCAGGAGGCTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAGATGGGAAGCTCGCCTaGACGGCAATCACACTCTCA +
Preference number: 5 (lower is better)
Translates to: GGRPSCGVEWWTEPLSSPDGKLA*TAITLS
Trigger: TGAGAGTGTGATTGCCGTCAAGGCGAGCTTCCCATC...TGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGGCTTCTCCACCTTGTTaGCCATGCCAGCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GRPSCGVEWWTEPLSSPRASPPC*PCQQRP
Trigger: AGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAGC...CCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTACCGGCATCTTCTCCTaGGACACATGGTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLTGIFS*DTWWEK
Trigger: CTTCTCCCACCATGTGTCCAAGGAGAAGATGCCGGT...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGGTTTCTTCTTGCACTTaGCACCCAGGGGGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: TRPCAHAGHGRLRARQAEVSSCT*HPGGSS
Trigger: GCTACTGCCCCCTGGGTGCAAAGTGCAAGAAGAAAC...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp AGGCTTGGTGGCGGGCGGCCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTAGCGTGTGTTTCTTCTaGCACTTTGCACCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RLGGGRPSCGVEWWTEPLSVCFF*HFAPRG
Trigger: CCCCCTGGGTGCAAAGTGCAAGAAGAAACACACGCT...AAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGGCCGCCCGCCACCAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp TGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCCCAGCTTGCAGAGCCTGTaGGAGCACGCTGCTGCTAAG +
Preference number: 5 (lower is better)
Translates to: CAHAGHGRLRARQAEQCPSLQSL*EHAAAK
Trigger: CTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCT...GGGACACTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp ACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGATGAAGGAAGGCAGCTaGCAGAGCCTGTTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: TRPCAHAGHGRLRARQAEMKEGS*QSLLEH
Trigger: GTGCTCCAACAGGCTCTGCAAGCTGCCTTCCTTCAT...CTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp GCTTACCAGGCTCCTTCTGGCAGACCAGAAGAGGATCTTCCACACTaGAGGTCCCCCTGGCTCTTGTTGGCCTCGAGGGCTGCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: AYQAPSGRPEEDLPH*RSPWLLLASRAAAV
Trigger: GACAGCTGCAGCCCTCGAGGCCAACAAGAGCCAGGGGGACCTGCAGTGTGGAAGATCCTCTTCTGGTCTGCCAGAAGGAGCCTGGTAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 90 bp CTTCTTGACAATGCGGTAGCGGGTCTTGATCACCTTGCTGGTGGGTaGAGTCCGCACGGCATGCAGGCTGGACGCTTCCTTGGTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LLDNAVAGLDHLAGG*SPHGMQAGRFLGGE
Trigger: CTCCCCACCAAGGAAGCGTCCAGCCTGCATGCCGTGCGGACTGCACCCACCAGCAAGGTGATCAAGACCCGCTACCGCATTGTCAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp GGCCCAGGACCCACTCTGTCTGTGCCAGCTACTGAGGGGCAGGCTGGCCAGGAAAACTTCATGCGGCCCTaGCAAGGACAGTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: GPGPTLSVPATEGQAGQENFMRP*QGQWYL
Trigger: CAGATACCACTGTCCTTGCAAGGGCCGCATGAAGTT...TTCCTGGCCAGCCTGCCCCTCAGTAGCTGGCACAGACAGAGTGGGTCCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS TCA 90 bp GTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGGTCTaGGGTAGGTGCAGGCCGGTCCCTGGGGTCCTCACAGACGTGGTT +
Preference number: 5 (lower is better)
Translates to: VEWWTEPLSSPRMRV*GRCRPVPGVLTDVV
Trigger: AACCACGTCTGTGAGGACCCCAGGGACCGGCCTGCACCTACCTCAGACCCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp TCTTGGAGAGCTTGTTGGCAGATACTTTGTAGAGGACCCCTCCGATaGAGCGGTAGCCTTTGCTCCGCCACCAAGGGGAGCCCGGTTGGG +
Preference number: 5 (lower is better)
Translates to: SWRACWQILCRGPLR*SGSLCSATKGSPVG
Trigger: CCCAACCGGGCTCCCCTTGGTGGCGGAGCAAAGGCTACCGCTGCATCGGAGGGGTCCTCTACAAAGTATCTGCCAACAAGCTCTCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp TCTCGGGATCGTGGATGTAGGGGCAGCGCTCGCCACGGTTGCACCTaGCGAAGCGGTTGTAGTACATGCAGTACTCCTTCCTCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SRDRGCRGSARHGCT*RSGCSTCSTPSSSP
Trigger: GGGAGAAGAGGAAGGAGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACGATCCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp CCACCTTCTCGGGATCGTGGATGTAGGGGCAGCGCTCGCCACGGTTaGACCTGCCGAAGCGGTTGTAGTACATGCAGTACTCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: PPSRDRGCRGSARHG*TCRSGCSTCSTPSS
Trigger: AGAGGAAGGAGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACGATCCCGAGAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGCTGGAGGCCTTCCACTaGTACTTGCTGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRLEAFH*YLLGAD
Trigger: GTCTGCCCCCAGCAAGTACAAGTGGAAGGCCTCCAG...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CCCTCCTGTGGGGTAGAGTGGTGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGTGTCTCCAGGAAGGCTaGTGCTGCTGCGTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: PSCGVEWWTEPLSSPRMRCLQEG*CCCVSG
Trigger: TCCGGAGACGCAGCAGCACAAGCCTTCCTGGAGACA...CCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCACCACTCTACCCCACAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp AGACCTCGGCCTTGCGGGACACGTACACGTGGCTATAGGGACAGTTaGTGTTGCTGCAGATGCCCTTCAGGAAGTAGGAGCACACCGGCA +
Preference number: 5 (lower is better)
Translates to: RPRPCGTRTRGYRDS*CCCRCPSGSRSTPA
Trigger: TGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCCGCAAGGCCGAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp CTTGGGCTCTGGGTCAGCTATGAGCTGCGGCTTCTCCACCTTGTTTaGCATGCCAGCAGAGGCCTTGCACACATTCTCTGCAGCCACTCT +
Preference number: 5 (lower is better)
Translates to: LGLWVSYELRLLHLV*HASRGLAHILCSHS
Trigger: AGAGTGGCTGCAGAGAATGTGTGCAAGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCAGAGCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 90 bp CGGCCTTGCGGGACACGTACACGTGGCTATAGGGACAGTTGCTGTTaGTGCAGATGCCCTTCAGGAAGTAGGAGCACACCGGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: RPCGTRTRGYRDSCC*CRCPSGSRSTPASS
Trigger: AGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCCGCAAGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS TCA 90 bp GAAGACCACACAGCAAATCCGGCTCAGCTCCCTGGAAAGGCGTGGTaGCCTCAGCAAACTTCATGCGGCCCTTGCAAGGACAGTGGTATC +
Preference number: 5 (lower is better)
Translates to: EDHTANPAQLPGKAW*PQQTSCGPCKDSGI
Trigger: GATACCACTGTCCTTGCAAGGGCCGCATGAAGTTTGCTGAGGTCACCACGCCTTTCCAGGGAGCTGAGCCGGATTTGCTGTGTGGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS GCA 90 bp CCTTGCGGGACACGTACACGTGGCTATAGGGACAGTTGCTGTTGCTaGAGATGCCCTTCAGGAAGTAGGAGCACACCGGCATCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PCGTRTRGYRDSCCC*RCPSGSRSTPASSP
Trigger: AGGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCCGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 90 bp GGGACACGTACACGTGGCTATAGGGACAGTTGCTGTTGCTGCAGATaGCCTTCAGGAAGTAGGAGCACACCGGCATCTTCTCCTTGGACA +
Preference number: 5 (lower is better)
Translates to: GTRTRGYRDSCCCCR*PSGSRSTPASSPWT
Trigger: TGTCCAAGGAGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTTTGTTTTTCCGGAACTaGTTAGTTCGACAGGTCACA +
Preference number: 5 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVLFFRN*LVRQVT
Trigger: TGTGACCTGTCGAACTAACAAGTTCCGGAAAAACAA...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTCGGATAGAACCTTTATaGCTGAACATAAAACACCTG +
Preference number: 5 (lower is better)
Translates to: PGLGEEDQALRTRWSWKVRIEPL*LNIKHL
Trigger: CAGGTGTTTTATGTTCAGCAATAAAGGTTCTATCCG...AACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS-3UTR CAA 90 bp CACCCTTTGGGCTGGGTCATCGGCCCAGGACCCACTCTGTCTGTGCCAGCTACTTTTCAGCTGAAGCTATaGGTGTTTTGTATGTCAGCT +
Preference number: 5 (lower is better)
Translates to: HPLGWVIGPGPTLSVPATFQLKL*VFCMSA
Trigger: AGCTGACATACAAAACACCAATAGCTTCAGCTGAAA...AGTAGCTGGCACAGACAGAGTGGGTCCTGGGCCGATGACCCAGCCCAAAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS GCA 72 bp GGGCCCGTGGCTGGCCGAGACCCTGCTCCTGGCGGTTaGGTCGCTGGGCCCTGGGGCGGGGGACGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GPVAGRDPAPGG*VAGPWGGGRGC
Trigger: GCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGGGTCTCGGCCAGCCACGGGCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp GCTTCCTGGGCCCGTGGCTGGCCGAGACCCTGCTCCTaGCGGTTGCGTCGCTGGGCCCTGGGGCGGGGGACG +
Preference number: 6 (lower is better)
Translates to: ASWARGWPRPCS*RLRRWALGRGT
Trigger: CGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGGGTCTCGGCCAGCCACGGGCCCAGGAAGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CAA 72 bp TGGGCCCGTGGCTGGCCGAGACCCTGCTCCTGGCGGTaGCGTCGCTGGGCCCTGGGGCGGGGGACGTGGCTG +
Preference number: 6 (lower is better)
Translates to: WARGWPRPCSWR*RRWALGRGTWL
Trigger: CAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCAGGAGCAGGGTCTCGGCCAGCCACGGGCCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp GCGGGGGACGTGGCTGCCCGCCGACTGTGGCGTTTCTaGGTACGGTGGAGCAGCTGGCACTGGGCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: AGDVAARRLWRF*VRWSSWHWAPR
Trigger: CCGCGGCGCCCAGTGCCAGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp GGCCCTGGGGCGGGGGACGTGGCTGCCCGCCGACTGTaGCGTTTCTGGGTACGGTGGAGCAGCTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: GPGAGDVAARRL*RFWVRWSSWHW
Trigger: CCAGTGCCAGCTGCTCCACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp TGGCGGTTGCGTCGCTGGGCCCTGGGGCGGGGGACGTaGCTGCCCGCCGACTGTGGCGTTTCTGGGTACGGT +
Preference number: 6 (lower is better)
Translates to: WRLRRWALGRGT*LPADCGVSGYG
Trigger: ACCGTACCCAGAAACGCCACAGTCGGCGGGCAGCCACGTCCCCCGCCCCAGGGCCCAGCGACGCAACCGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp CACTGCCCGGCTGGCCAGGGAACGGCTACAGCTGCCTaGAGGATCCAGCCGGCCTGTGCGCAGGAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: HCPAGQGTATAA*RIQPACAQEGP
Trigger: AGGCCCCTCCTGCGCACAGGCCGGCTGGATCCTGCAGGCAGCTGTAGCCGTTCCCTGGCCAGCCGGGCAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp GCTGCACTGCCCGGCTGGCCAGGGAACGGCTACAGCTaGCTGCAGGATCCAGCCGGCCTGTGCGCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: AALPGWPGNGYS*LQDPAGLCAGG
Trigger: CCCTCCTGCGCACAGGCCGGCTGGATCCTGCAGGCAGCTGTAGCCGTTCCCTGGCCAGCCGGGCAGTGCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp TTCCCCCTGAGGGCCTGTCTCCGCCGGAGGCTGAGGTaGCTCTTGGCGGTGGCGGCAGGTGAGGTGCCGCTT +
Preference number: 6 (lower is better)
Translates to: FPLRACLRRRLR*LLAVAAGEVPL
Trigger: AAGCGGCACCTCACCTGCCGCCACCGCCAAGAGCCACCTCAGCCTCCGGCGGAGACAGGCCCTCAGGGGGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CAA 90 bp GCCACGCCAGTGCGTGGGGGCAGAGCGGAGGATGGGAAGCTCGCCTaGACGGCAATCACACTCTCACTGACTGTCCGGCGGGGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: ATPVRGGRAEDGKLA*TAITLSLTVRRGSR
Trigger: CCGGGAGCCCCGCCGGACAGTCAGTGAGAGTGTGATTGCCGTCAAGGCGAGCTTCCCATCCTCCGCTCTGCCCCCACGCACTGGCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp CTGTCCGGCGGGGCTCCCGGGGGCTGTCGCCCACACTaGCCACTGACTTCACCATCCTGGGCTTACCAGGCT +
Preference number: 6 (lower is better)
Translates to: LSGGAPGGCRPH*PLTSPSWAYQA
Trigger: AGCCTGGTAAGCCCAGGATGGTGAAGTCAGTGGGCAGTGTGGGCGACAGCCCCCGGGAGCCCCGCCGGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 72 bp ACCAAGGGGAGCCCGGTTGGGCTTTCCCACCCCCGCTaGCAACTGGACGCAGGCGGTTCAGCACCAGGGACC +
Preference number: 6 (lower is better)
Translates to: TKGSPVGLSHPR*QLDAGGSAPGT
Trigger: GGTCCCTGGTGCTGAACCGCCTGCGTCCAGTTGCCAGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp GGCCTGTGCGCAGGAGGGGCCTGCTGCCCGCATCACTaGGCTGGCCGGAGGTCTTGGAGAGCTTGTTGGCAG +
Preference number: 6 (lower is better)
Translates to: GLCAGGACCPHH*AGRRSWRACWQ
Trigger: CTGCCAACAAGCTCTCCAAGACCTCCGGCCAGCCCAGTGATGCGGGCAGCAGGCCCCTCCTGCGCACAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CAA 72 bp GCGGTAGCCTTTGCTCCGCCACCAAGGGGAGCCCGGTaGGGCTTTCCCACCCCCGCTGGCAACTGGACGCAG +
Preference number: 6 (lower is better)
Translates to: AVAFAPPPRGAR*GFPTPAGNWTQ
Trigger: CTGCGTCCAGTTGCCAGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTGGTGGCGGAGCAAAGGCTACCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CAA 90 bp TCCGATGCAGCGGTAGCCTTTGCTCCGCCACCAAGGGGAGCCCGGTaGGGCTTTCCCACCCCCGCTGGCAACTGGACGCAGGCGGTTCAG +
Preference number: 6 (lower is better)
Translates to: SDAAVAFAPPPRGAR*GFPTPAGNWTQAVQ
Trigger: CTGAACCGCCTGCGTCCAGTTGCCAGCGGGGGTGGGAAAGCCCAACCGGGCTCCCCTTGGTGGCGGAGCAAAGGCTACCGCTGCATCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp AGGTGGGCCCGGCTCGGTGGCAGGCGACATAGTCGGTaGGTGGTGACCTGTACCAGGCCCTTGTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: RWARLGGRRHSR*VVTCTRPLLGV
Trigger: GACCCCCAACAAGGGCCTGGTACAGGTCACCACGCACCGACTATGTCGCCTGCCACCGAGCCGGGCCCACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 72 bp TGCTGGTCTGTCCCCCGACGGGGACCTAGACAGGACTaGGGAGAGCTGGGAGGCATGGTCCTTGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: CWSVPRRGPRQD*GELGGMVLAAG
Trigger: GCCAGCAGCAAGGACCATGCCTCCCAGCTCTCCCCAGTCCTGTCTAGGTCCCCGTCGGGGGACAGACCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 72 bp GGACTGGGGAGAGCTGGGAGGCATGGTCCTTGCTGCTaGCCTCCGACTGCCAACGGAAGGAGGAAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GLGRAGRHGPCC*PPTANGRRKRR
Trigger: CCTCCTCTTCCTCCTTCCGTTGGCAGTCGGAGGCCAGCAGCAAGGACCATGCCTCCCAGCTCTCCCCAGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CAA 72 bp GTGCGTGGGGGCAGAGCGGAGGATGGGAAGCTCGCCTaGACGGCAATCACACTCTCACTGACTGTCCGGCGG +
Preference number: 6 (lower is better)
Translates to: VRGGRAEDGKLA*TAITLSLTVRR
Trigger: CCGCCGGACAGTCAGTGAGAGTGTGATTGCCGTCAAGGCGAGCTTCCCATCCTCCGCTCTGCCCCCACGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CAA 90 bp GACGGGGACCTAGACAGGACTGGGGAGAGCTGGGAGGCATGGTCCTaGCTGCTGGCCTCCGACTGCCAACGGAAGGAGGAAGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: DGDLDRTGESWEAWS*LLASDCQRKEEEEE
Trigger: CTCCTCCTCTTCCTCCTTCCGTTGGCAGTCGGAGGCCAGCAGCAAGGACCATGCCTCCCAGCTCTCCCCAGTCCTGTCTAGGTCCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CAA 90 bp GCTCCTGGGCTCGGCGAGGACTGCAGGGAGATGAAGGAAGGCAGCTaGCAGAGCCTGTTGGAGCACGCTGCTGCTAAGGCAGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: APGLGEDCREMKEGS*QSLLEHAAAKAASW
Trigger: CCAGGAGGCTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCTGCCTTCCTTCATCTCCCTGCAGTCCTCGCCGAGCCCAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS TCA 72 bp CCGGAGGCTGAGGTGGCTCTTGGCGGTGGCGGCAGGTaGGGTGCCGCTTTTCTTGTCTCCAGGAAGGCTTGT +
Preference number: 6 (lower is better)
Translates to: PEAEVALGGGGR*GAAFLVSRKAC
Trigger: ACAAGCCTTCCTGGAGACAAGAAAAGCGGCACCTCACCTGCCGCCACCGCCAAGAGCCACCTCAGCCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS TCA 72 bp CCCGGCTCGGTGGCAGGCGACATAGTCGGTGCGTGGTaGCCTGTACCAGGCCCTTGTTGGGGGTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PGSVAGDIVGAW*PVPGPCWGSSS
Trigger: TGAAGAAGACCCCCAACAAGGGCCTGGTACAGGTCACCACGCACCGACTATGTCGCCTGCCACCGAGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp AGGGTCCCGGGGGCCGATTCACGAGGGAGTATTTCTTaGGCCACGAAGGCCCATGGTGGGAAGAGTAGCCCC +
Preference number: 6 (lower is better)
Translates to: RVPGADSRGSIS*ATKAHGGKSSP
Trigger: GGGGCTACTCTTCCCACCATGGGCCTTCGTGGCGCAAGAAATACTCCCTCGTGAATCGGCCCCCGGGACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp CTTTGTAGAGGACCCCTCCGATGCAGCGGTAGCCTTTaGTCCGCCACCAAGGGGAGCCCGGTTGGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: LCRGPLRCSGSL*SATKGSPVGLS
Trigger: GGAAAGCCCAACCGGGCTCCCCTTGGTGGCGGAGCAAAGGCTACCGCTGCATCGGAGGGGTCCTCTACAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp CGAAGGCCCATGGTGGGAAGAGTAGCCCCTCCGGCTTaGACGAGGGTAGCGGGCACTAAAGGCTCTGCCACT +
Preference number: 6 (lower is better)
Translates to: RRPMVGRVAPPA*TRVAGTKGSAT
Trigger: AGTGGCAGAGCCTTTAGTGCCCGCTACCCTCGTCCAAGCCGGAGGGGCTACTCTTCCCACCATGGGCCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CAA 90 bp GGCGAGGACTGCAGGGAGATGAAGGAAGGCAGCTTGCAGAGCCTGTaGGAGCACGCTGCTGCTAAGGCAGCCTCCTGGAGAGATGGTGCC +
Preference number: 6 (lower is better)
Translates to: GEDCREMKEGSLQSL*EHAAAKAASWRDGA
Trigger: GGCACCATCTCTCCAGGAGGCTGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCTGCCTTCCTTCATCTCCCTGCAGTCCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS TCA 72 bp AGATGGTGCCTCGTGGTCCAAGGAAGCGGGAGGGGATaGGGAGGAGGAGGAGGAGGAGGAAGCCTTCGAGGA +
Preference number: 6 (lower is better)
Translates to: RWCLVVQGSGRG*GGGGGGGSLRG
Trigger: TCCTCGAAGGCTTCCTCCTCCTCCTCCTCCTCCTCATCCCCTCCCGCTTCCTTGGACCACGAGGCACCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp CGCCACGGTTGCACCTGCCGAAGCGGTTGTAGTACATaGAGTACTCCTTCCTCTTCTCCCTGCGCTGCCGCG +
Preference number: 6 (lower is better)
Translates to: RHGCTCRSGCST*STPSSSPCAAA
Trigger: CGCGGCAGCGCAGGGAGAAGAGGAAGGAGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp GGGAGAAGGGGCAGGTCCCATCCGTTTTCTTGCAGGTaGCCCGGACAAACCTGGTGCACACGGCCACCTTCT +
Preference number: 6 (lower is better)
Translates to: GRRGRSHPFSCR*PGQTWCTRPPS
Trigger: AGAAGGTGGCCGTGTGCACCAGGTTTGTCCGGGGCACCTGCAAGAAAACGGATGGGACCTGCCCCTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp AGACCAGAAGAGGATCTTCCACACTGCAGGTCCCCCTaGCTCTTGTTGGCCTCGAGGGCTGCAGCTGTCCCC +
Preference number: 6 (lower is better)
Translates to: RPEEDLPHCRSP*LLLASRAAAVP
Trigger: GGGGACAGCTGCAGCCCTCGAGGCCAACAAGAGCCAGGGGGACCTGCAGTGTGGAAGATCCTCTTCTGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 72 bp AGCCTGTTGGAGCACGCTGCTGCTAAGGCAGCCTCCTaGAGAGATGGTGCCTCGTGGTCCAAGGAAGCGGGA +
Preference number: 6 (lower is better)
Translates to: SLLEHAAAKAAS*RDGASWSKEAG
Trigger: TCCCGCTTCCTTGGACCACGAGGCACCATCTCTCCAGGAGGCTGCCTTAGCAGCAGCGTGCTCCAACAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS TCA 72 bp TGGACAGAGCCTCTTTCCTCTCCAAGGATGAGGGTCTaGGGTAGGTGCAGGCCGGTCCCTGGGGTCCTCACA +
Preference number: 6 (lower is better)
Translates to: WTEPLSSPRMRV*GRCRPVPGVLT
Trigger: TGTGAGGACCCCAGGGACCGGCCTGCACCTACCTCAGACCCTCATCCTTGGAGAGGAAAGAGGCTCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp GCTCCTTCTGGCAGACCAGAAGAGGATCTTCCACACTaGAGGTCCCCCTGGCTCTTGTTGGCCTCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: APSGRPEEDLPH*RSPWLLLASRA
Trigger: AGCCCTCGAGGCCAACAAGAGCCAGGGGGACCTGCAGTGTGGAAGATCCTCTTCTGGTCTGCCAGAAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp GGCTTCCTGGGCTTGGGCTCTGGGTCAGCTATGAGCTaGGGCTTCTCCACCTTGTTTGCCATGCCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GFLGLGSGSAMS*GFSTLFAMPAE
Trigger: CTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCAGAGCCCAAGCCCAGGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp AATGCGGTAGCGGGTCTTGATCACCTTGCTGGTGGGTaGAGTCCGCACGGCATGCAGGCTGGACGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: NAVAGLDHLAGG*SPHGMQAGRFL
Trigger: AAGGAAGCGTCCAGCCTGCATGCCGTGCGGACTGCACCCACCAGCAAGGTGATCAAGACCCGCTACCGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp CGTGGATGTAGGGGCAGCGCTCGCCACGGTTGCACCTaGCGAAGCGGTTGTAGTACATGCAGTACTCCTTCC +
Preference number: 6 (lower is better)
Translates to: RGCRGSARHGCT*RSGCSTCSTPS
Trigger: GGAAGGAGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp CGGGATCGTGGATGTAGGGGCAGCGCTCGCCACGGTTaGACCTGCCGAAGCGGTTGTAGTACATGCAGTACT +
Preference number: 6 (lower is better)
Translates to: RDRGCRGSARHG*TCRSGCSTCST
Trigger: AGTACTGCATGTACTACAACCGCTTCGGCAGGTGCAACCGTGGCGAGCGCTGCCCCTACATCCACGATCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp GGCTGTCGCCCACACTGCCCACTGACTTCACCATCCTaGGCTTACCAGGCTCCTTCTGGCAGACCAGAAGAG +
Preference number: 6 (lower is better)
Translates to: GCRPHCPLTSPS*AYQAPSGRPEE
Trigger: CTCTTCTGGTCTGCCAGAAGGAGCCTGGTAAGCCCAGGATGGTGAAGTCAGTGGGCAGTGTGGGCGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS CCA 72 bp GCCTGCTGCCCGCATCACTGGGCTGGCCGGAGGTCTTaGAGAGCTTGTTGGCAGATACTTTGTAGAGGACCC +
Preference number: 6 (lower is better)
Translates to: ACCPHHWAGRRS*RACWQILCRGP
Trigger: GGGTCCTCTACAAAGTATCTGCCAACAAGCTCTCCAAGACCTCCGGCCAGCCCAGTGATGCGGGCAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CAA 72 bp CTCGGCGAGGACTGCAGGGAGATGAAGGAAGGCAGCTaGCAGAGCCTGTTGGAGCACGCTGCTGCTAAGGCA +
Preference number: 6 (lower is better)
Translates to: LGEDCREMKEGS*QSLLEHAAAKA
Trigger: TGCCTTAGCAGCAGCGTGCTCCAACAGGCTCTGCAAGCTGCCTTCCTTCATCTCCCTGCAGTCCTCGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CAA 90 bp CTGGGCTTGGGCTCTGGGTCAGCTATGAGCTGCGGCTTCTCCACCTaGTTTGCCATGCCAGCAGAGGCCTTGCACACATTCTCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: LGLGSGSAMSCGFST*FAMPAEALHTFSAA
Trigger: GGCTGCAGAGAATGTGTGCAAGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCAGAGCCCAAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS TCA 72 bp TCTTCTTGCACTTTGCACCCAGGGGGCAGTAGCCTTTaGGGAAGTCGCTGCAGACCTCGGCCTTGCGGGACA +
Preference number: 6 (lower is better)
Translates to: SSCTLHPGGSSL*GSRCRPRPCGT
Trigger: TGTCCCGCAAGGCCGAGGTCTGCAGCGACTTCCTCAAAGGCTACTGCCCCCTGGGTGCAAAGTGCAAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp GCTTGTTGGCAGATACTTTGTAGAGGACCCCTCCGATaGAGCGGTAGCCTTTGCTCCGCCACCAAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: ACWQILCRGPLR*SGSLCSATKGS
Trigger: GCTCCCCTTGGTGGCGGAGCAAAGGCTACCGCTGCATCGGAGGGGTCCTCTACAAAGTATCTGCCAACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS TCA 72 bp ACAGCAAATCCGGCTCAGCTCCCTGGAAAGGCGTGGTaGCCTCAGCAAACTTCATGCGGCCCTTGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: TANPAQLPGKAW*PQQTSCGPCKD
Trigger: GTCCTTGCAAGGGCCGCATGAAGTTTGCTGAGGTCACCACGCCTTTCCAGGGAGCTGAGCCGGATTTGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528401.1
CDS CAA 72 bp GGCTCTGGGTCAGCTATGAGCTGCGGCTTCTCCACCTaGTTTGCCATGCCAGCAGAGGCCTTGCACACATTC +
Preference number: 6 (lower is better)
Translates to: GSGSAMSCGFST*FAMPAEALHTF
Trigger: GAATGTGTGCAAGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp TGGGTCAGCTATGAGCTGCGGCTTCTCCACCTTGTTTaGCATGCCAGCAGAGGCCTTGCACACATTCTCTGC +
Preference number: 6 (lower is better)
Translates to: WVSYELRLLHLV*HASRGLAHILC
Trigger: GCAGAGAATGTGTGCAAGGCCTCTGCTGGCATGGCAAACAAGGTGGAGAAGCCGCAGCTCATAGCTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp GGGACACGTACACGTGGCTATAGGGACAGTTGCTGTTaGTGCAGATGCCCTTCAGGAAGTAGGAGCACACCG +
Preference number: 6 (lower is better)
Translates to: GTRTRGYRDSCC*CRCPSGSRSTP
Trigger: CGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS GCA 72 bp CCTTGCGGGACACGTACACGTGGCTATAGGGACAGTTaGTGTTGCTGCAGATGCCCTTCAGGAAGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: PCGTRTRGYRDS*CCCRCPSGSRS
Trigger: GCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGTCCCGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS TCA 72 bp TGTCTCCAGGAAGGCTTGTGCTGCTGCGTCTCCGGATaGTCTTGGTGCGGCTCTTCACTTTGTAAGCCGAGA +
Preference number: 6 (lower is better)
Translates to: CLQEGLCCCVSG*SWCGSSLCKPR
Trigger: TCTCGGCTTACAAAGTGAAGAGCCGCACCAAGATCATCCGGAGACGCAGCAGCACAAGCCTTCCTGGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp ACACGTACACGTGGCTATAGGGACAGTTGCTGTTGCTaGAGATGCCCTTCAGGAAGTAGGAGCACACCGGCA +
Preference number: 6 (lower is better)
Translates to: TRTRGYRDSCCC*RCPSGSRSTPA
Trigger: TGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGTACGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6
CDS CCA 72 bp ACTGACTTCACCATCCTGGGCTTACCAGGCTCCTTCTaGCAGACCAGAAGAGGATCTTCCACACTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: TDFTILGLPGSF*QTRRGSSTLQV
Trigger: GACCTGCAGTGTGGAAGATCCTCTTCTGGTCTGCCAGAAGGAGCCTGGTAAGCCCAGGATGGTGAAGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262577.6
ENST00000632165.1
CDS GCA 72 bp ACACGTGGCTATAGGGACAGTTGCTGTTGCTGCAGATaGCCTTCAGGAAGTAGGAGCACACCGGCATCTTCT +
Preference number: 6 (lower is better)
Translates to: TRGYRDSCCCCR*PSGSRSTPASS
Trigger: AGAAGATGCCGGTGTGCTCCTACTTCCTGAAGGGCATCTGCAGCAACAGCAACTGTCCCTATAGCCACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262577.6