RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H13 (Homo sapiens)

Ensembl gene IDs: ENSG00000123200

Ensembl transcript IDs: ENST00000242848.8, ENST00000282007.7, ENST00000428921.1, ENST00000464597.2, ENST00000470308.1, ENST00000679008.1

Found 697 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCTTGCCCTTTATCTATCTACACAATTCCTTATTACCAGCAGCTaGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAGCCG +
Preference number: 1 (lower is better)
Translates to: TLALYLSTQFLITSS*NPVVQLWQLDRPEP
Trigger: CGGCTCAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAAAGGGCAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR TCA 90 bp CAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTaGGCCGTCAGTTATGAGATAGATGACCTTTTAATTGTACTAGCA +
Preference number: 1 (lower is better)
Translates to: QQLESSCAIMATGQT*AVSYEIDDLLIVLA
Trigger: TGCTAGTACAATTAAAAGGTCATCTATCTCATAACTGACGGCTCAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR TCA 90 bp ATCACCAACAATAGTATGTACCTTAATCTTTACACAATTGGACAGTaGGGAGCAAAGTGGGAGATTCTACCAATGCCACTTACAGAACAG +
Preference number: 1 (lower is better)
Translates to: ITNNSMYLNLYTIGQ*GAKWEILPMPLTEQ
Trigger: CTGTTCTGTAAGTGGCATTGGTAGAATCTCCCACTTTGCTCCTCACTGTCCAATTGTGTAAAGATTAAGGTACATACTATTGTTGGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR GCA 90 bp TATTCCATCACTTTACAAATAAAATTGAGGCTCACAGGAGTTATTTaGTTAAGGTCACAGAACCAACCAAACAAGGCAGATACAGTAGGG +
Preference number: 1 (lower is better)
Translates to: YSITLQIKLRLTGVI*LRSQNQPNKADTVG
Trigger: CCCTACTGTATCTGCCTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTATTTGTAAAGTGATGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR CCA 90 bp CCTTCTTTTATTATTATCACTACTACTGTCTGCTCACAAATTCTGTaGCCAGAGTCCATTTCAAATCCTTCTAAGAGTCCACTTCATGAG +
Preference number: 1 (lower is better)
Translates to: PSFIIITTTVCSQIL*PESISNPSKSPLHE
Trigger: CTCATGAAGTGGACTCTTAGAAGGATTTGAAATGGACTCTGGCCACAGAATTTGTGAGCAGACAGTAGTAGTGATAATAATAAAAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CCA 90 bp GAACCAACCAAACAAGGCAGATACAGTAGGGCAAGAACTAAGTCTTaGGTCATTTTTCGGTTAATACACGTTAACAATTATATGTATTTT +
Preference number: 1 (lower is better)
Translates to: EPTKQGRYSRARTKS*VIFRLIHVNNYMYF
Trigger: AAAATACATATAATTGTTAACGTGTATTAACCGAAAAATGACCCAAGACTTAGTTCTTGCCCTACTGTATCTGCCTTGTTTGGTTGGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGCAGCCTCAATTTCCTaGGCTCCAGCAATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNAASIS*APAILL
Trigger: CAGCAGGATTGCTGGAGCCCAGGAAATTGAGGCTGC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR CAA 90 bp AAGCTCTTAATCACTTTGTTAAAGACTCAACCTACACACCTGCATTaGGGTAGATGTCTAGGGGAAAGGGCTGCCAAAATACCCAATTTC +
Preference number: 2 (lower is better)
Translates to: KLLITLLKTQPTHLH*GRCLGERAAKIPNF
Trigger: GAAATTGGGTATTTTGGCAGCCCTTTCCCCTAGACATCTACCCAAATGCAGGTGTGTAGGTTGAGTCTTTAACAAAGTGATTAAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGCAACTGGACAGACCTaGGCCGTCAGTTATGAGATA +
Preference number: 2 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYATGQT*AVSYEI
Trigger: TATCTCATAACTGACGGCTCAGGTCTGTCCAGTTGC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTAAGGTAGGTACTAGATaGGACAGAGACAGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCKVGTR*DRDSEN
Trigger: GTTTTCACTGTCTCTGTCTCATCTAGTACCTACCTT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAAAGGCTGGAAGAGCAGTaGCAACCATTTTCCAAAATC +
Preference number: 2 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDERLEEQ*QPFSKI
Trigger: GATTTTGGAAAATGGTTGTCACTGCTCTTCCAGCCT...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR GCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTCTAGGGGAAAGGGCTaGCAAAATACCCAATTTCTT +
Preference number: 2 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKSRGKG*QNTQFL
Trigger: AAGAAATTGGGTATTTTGGCAGCCCTTTCCCCTAGA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTCCGAACTGTATTTCATaGGTAGCAAAATCAAACCAG +
Preference number: 2 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCPNCIS*VAKSNQ
Trigger: CTGGTTTGATTTTGCTACCCATGAAATACAGTTCGG...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATCTGAATGCTGTGACTaGGTGAACAAAGGAATAGTT +
Preference number: 2 (lower is better)
Translates to: IYTIPYYQQLESSCAIMASECCD*VNKGIV
Trigger: AACTATTCCTTTGTTCACTCAGTCACAGCATTCAGA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CAA 90 bp GTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACACAATaGGACAGTGAGGAGCAAAGTGGGAGATTCTACCAATGCCACTTA +
Preference number: 2 (lower is better)
Translates to: VKASPTIVCTLIFTQ*DSEEQSGRFYQCHL
Trigger: TAAGTGGCATTGGTAGAATCTCCCACTTTGCTCCTCACTGTCCAATTGTGTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACAGGCTGGAAGAGCAGTaGCAACCATTTTCCAAAATC +
Preference number: 2 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYRLEEQ*QPFSKI
Trigger: GATTTTGGAAAATGGTTGTCACTGCTCTTCCAGCCT...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTGGTTCTGTATGGATaGTCCAGACATAAATCCATG +
Preference number: 2 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDELVLYG*SRHKSM
Trigger: CATGGATTTATGTCTGGATCATCCATACAGAACCAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR GCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTATAACTGAAAATTGCTaGAGTGAGGTCAAAAATCAG +
Preference number: 2 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCITENC*SEVKNQ
Trigger: CTGATTTTTGACCTCACTGCAGCAATTTTCAGTTAT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGCATTCCCTTTCACGTaGTCTGTACAACATAGTACT +
Preference number: 2 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYAFPFT*SVQHST
Trigger: AGTACTATGTTGTACAGACCACGTGAAAGGGAATGC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTTCCCAACTTTTCTGTaGGATAACTCTTCTTCTCAA +
Preference number: 2 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKFPTFL*DNSSSQ
Trigger: TTGAGAAGAAGAGTTATCCCACAGAAAAGTTGGGAA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR CAA 90 bp TTATTCCATCACTTTACAAATAAAATTGAGGCTCACAGGAGTTATTaGCTTAAGGTCACAGAACCAACCAAACAAGGCAGATACAGTAGG +
Preference number: 2 (lower is better)
Translates to: LFHHFTNKIEAHRSY*LKVTEPTKQGRYSR
Trigger: CCTACTGTATCTGCCTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTATTTGTAAAGTGATGGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTAAGAATATGCACTGCTaGAGGAAGACAGTACCAAAA +
Preference number: 2 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIKNMHC*RKTVPK
Trigger: TTTTGGTACTGTCTTCCTTCAGCAGTGCATATTCTT...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACAAGAATATGCACTGCTaGAGGAAGACAGTACCAAAA +
Preference number: 2 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYKNMHC*RKTVPK
Trigger: TTTTGGTACTGTCTTCCTTCAGCAGTGCATATTCTT...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACGTAAAATCTTAAGTTaGCCAAAACTAGTGTCTCTA +
Preference number: 2 (lower is better)
Translates to: IYTIPYYQQLESSCAIMARKILS*PKLVSL
Trigger: TAGAGACACTAGTTTTGGCCAACTTAAGATTTTACG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTTGGCTTCCTTCTGCTaGAATTCGCCTATAAACATA +
Preference number: 2 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYLASFC*NSPINI
Trigger: TATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR GCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACGGGAGATTCTACCAATaGCACTTACAGAACAGATTT +
Preference number: 2 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYGRFYQ*HLQNRF
Trigger: AAATCTGTTCTGTAAGTGGCATTGGTAGAATCTCCC...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTCACTCTTTTAGCATaGCTGATAAATCTTTTCTGC +
Preference number: 2 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEFTLLA*LINLFC
Trigger: GCAGAAAAGATTTATCAGCCATGCTAAAAGAGTGAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR GCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACAATGGTGAGGATAGCTaGCAAAATAATCAAAAGGCT +
Preference number: 2 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYNGEDS*QNNQKA
Trigger: AGCCTTTTGATTATTTTGGCAGCTATCCTCACCATT...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTTCACTCTTTTAGCATaGCTGATAAATCTTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIFTLLA*LINLFC
Trigger: GCAGAAAAGATTTATCAGCCATGCTAAAAGAGTGAA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCGTAAAATCTTAAGTTaGCCAAAACTAGTGTCTCTA +
Preference number: 2 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYRKILS*PKLVSL
Trigger: TAGAGACACTAGTTTTGGCCAACTTAAGATTTTACG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR TCA 72 bp TCCTGGGCTCCAGCAATCCTGCTGCCTCAACCTCCCTaGGTAGCTGTGACTACAGACATGCAACACCACGCC +
Preference number: 3 (lower is better)
Translates to: SWAPAILLPQPP*VAVTTDMQHHA
Trigger: GGCGTGGTGTTGCATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR CCA 72 bp CATACCACGCCAGCTAGACCAGCATTCCCTTTCACGTaGTCTGTACAACATAGTACTGCACAATGTGAGCAA +
Preference number: 3 (lower is better)
Translates to: HTTPARPAFPFT*SVQHSTAQCEQ
Trigger: TTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CCA 72 bp CTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATaGCAACTGGACAGACCTGAGCCGTCAGTTATGAGA +
Preference number: 3 (lower is better)
Translates to: LITSSWNPVVQL*QLDRPEPSVMR
Trigger: TCTCATAACTGACGGCTCAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR TCA 72 bp AGGATGGTGACGACAATCTGCAATTACTGGTCAGAGTaGAGCGAAGTGACAGGTCAGATTTTTCAGCATATC +
Preference number: 3 (lower is better)
Translates to: RMVTTICNYWSE*SEVTGQIFQHI
Trigger: GATATGCTGAAAAATCTGACCTGTCACTTCGCTTCACTCTGACCAGTAATTGCAGATTGTCGTCACCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CAA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGCTCACAGGAGTTATTaGCTTAAGGTCACAGAACCA +
Preference number: 3 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCAHRSY*LKVTEP
Trigger: TGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR TCA 72 bp GAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTaGGCCGTCAGTTATGAGATAGATGACCTTTTAATT +
Preference number: 3 (lower is better)
Translates to: ESSCAIMATGQT*AVSYEIDDLLI
Trigger: AATTAAAAGGTCATCTATCTCATAACTGACGGCTCAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR TCA 72 bp CGACAATCTGCAATTACTGGTCAGAGTGAAGCGAAGTaGCAGGTCAGATTTTTCAGCATATCAAGTTACTAC +
Preference number: 3 (lower is better)
Translates to: RQSAITGQSEAK*QVRFFSISSYY
Trigger: GTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTCGCTTCACTCTGACCAGTAATTGCAGATTGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CCA 72 bp CTTTATCTATCTACACAATTCCTTATTACCAGCAGCTaGAATCCAGTTGTGCAATTATGGCAACTGGACAGA +
Preference number: 3 (lower is better)
Translates to: LYLSTQFLITSS*NPVVQLWQLDR
Trigger: TCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACAGGTTACGTTAGGTTaGTTAACTCTTGATTTGCTT +
Preference number: 3 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAQVTLG*LTLDLL
Trigger: AAGCAAATCAAGAGTTAACAAACCTAACGTAACCTG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGCTTCTCCTGCTCTGTTaGCAATTATACATGCTTTCA +
Preference number: 3 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLLLLLC*QLYMLS
Trigger: TGAAAGCATGTATAATTGCAAACAGAGCAGGAGAAG...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CCA 72 bp CTACAGAGAACAATATTATCCACTAAAATCAGGAAGTaGCTTCCTGAAGGGTATTCATTCTCTGAGGTCATA +
Preference number: 3 (lower is better)
Translates to: LQRTILSTKIRK*LPEGYSFSEVI
Trigger: TATGACCTCAGAGAATGAATACCCTTCAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR GCA 72 bp ACTTTACAAATAAAATTGAGGCTCACAGGAGTTATTTaGTTAAGGTCACAGAACCAACCAAACAAGGCAGAT +
Preference number: 3 (lower is better)
Translates to: TLQIKLRLTGVI*LRSQNQPNKAD
Trigger: ATCTGCCTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTATTTGTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR-3UTR CAA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCAGGTTACGTTAGGTTaGTTAACTCTTGATTTGCTT +
Preference number: 3 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYQVTLG*LTLDLL
Trigger: AAGCAAATCAAGAGTTAACAAACCTAACGTAACCTG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR GCA 72 bp AAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTaGTCTGTTTGCAATTATACATGCTTTCAAAGTCAT +
Preference number: 3 (lower is better)
Translates to: KGHKEILIKVFS*SVCNYTCFQSH
Trigger: ATGACTTTGAAAGCATGTATAATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACCGGGAACCGGCTCTTaGCTAGCGAGGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPPGTGS*LARSPR
Trigger: CCGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCCGG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATTGTCTTGGAGGACTCTaGTTTCTCTGGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHCLGGL*FLWGDD
Trigger: GTCGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACA...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAAGCTCCCTTCGCAAGTaGAGTCCGGAGGCACCACCG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSSLRK*SPEAPP
Trigger: CGGTGGTGCCTCCGGACTGCACTTGCGAAGGGAGCT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGGAGGAGCCCCCGGGATaGCTGAGAAGCAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLEEPPG*LRSRTN
Trigger: GTTGGTTCTGCTTCTCAGCCATCCCGGGGGCTCCTC...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACTCTGTCCCCGCGCCTaGACCCAGGAGGACGACGAC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMALCPRA*TQEDDD
Trigger: GTCGTCGTCCTCCTGGGTCCAGGCGCGGGGACAGAG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATGGACTCTGCTTTCTCTaGGGAGACGACAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHGLCFL*GDDKEC
Trigger: ACATTCTTTGTCGTCTCCCCAGAGAAAGCAGAGTCC...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGCATGGGCATCACGAGTaGACCGAGAATCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLHGHHE*TENLWD
Trigger: ATCCCAGAGATTCTCGGTCCACTCGTGATGCCCATG...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGAGTAGCCACAGGCGGTaGAGGAGGAAGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLSSHRR*RRKKRR
Trigger: TCTTCTCTTCTTCCTCCTCCACCGCCTGTGGCTACT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCTCTTTCGACCACTTTaGTCATCTCCACTTCGATGG +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHLFRPL*SSPLRW
Trigger: CCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGACCTTTACCACGAGGTaGAGGGCCATGTACGAATCT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLTFTTR*RAMYES
Trigger: AGATTCGTACATGGCCCTTCACCTCGTGGTAAAGGT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGACGGCACTGTGTCTCTaGTGTACTGCCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLTALCL*CTASAG
Trigger: CCCAGCACTGGCAGTACAGCAGAGACACAGTGCCGT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGCTGTCTTCTGTGAGGTaGGAGGGACTAAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLLSSVR*EGLRER
Trigger: TCGTTCTCTTAGTCCCTCGCACCTCACAGAAGACAG...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATTCCATAGGCTTGCGATaGTGTGCATCTTCTATAGTC +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHSIGLR*CASSIV
Trigger: GACTATAGAAGATGCACAGCATCGCAAGCCTATGGA...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTACGGTTACTCCGATTaGTCCCGAGGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLYGYSD*SRGCCS
Trigger: GGAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCTTGAAGCCTGTCTCTaGTATCAAATGACCCAGATC +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHLEACL*YQMTQI
Trigger: GATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATTATCTCGATCCCTGTTaGGTGGCCAATCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHYLDPC*VANLYQ
Trigger: CTGATAAAGATTGGCCACGCAACAGGGATCGAGATA...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGCAGAGCGATATCTTCTaGTATAGGAGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLQSDIF*YRRGWT
Trigger: AGTCCACCCCCTCCTATACCAGAAGATATCGCTCTG...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCGATCTTCAGACTGGTaGTGTCCTATAATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHRSSDW*CPIMSC
Trigger: ACAGGACATTATAGGACACCACCAGTCTGAAGATCG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATTCTCGATCTTCAGACTaGTGGTGTCCTATAATGTCC +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHSRSSD*WCPIMS
Trigger: GGACATTATAGGACACCACCAGTCTGAAGATCGAGA...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCAAAAGTATTATTGGTaGTATTGGTGGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHQKYYW*YWWGWQ
Trigger: CTGCCACCCCCACCAATACCACCAATAATACTTTTG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTGCAATTATGGCAACTaGACAGACCTGAGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLCNYGN*TDLSRQ
Trigger: CTGACGGCTCAGGTCTGTCCAGTTGCCATAATTGCA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAAAGCCCCCGGGATGGCTaGGAAGCAGAACCAACCCGC +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDESPRDG*EAEPTR
Trigger: GCGGGTTGGTTCTGCTTCTCAGCCATCCCGGGGGCT...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGAGACGACTTCGGGCTTaGTTTTCGCTTCGGAGATTT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLRRLRA*FSLRRF
Trigger: AAATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGCTAGTTCGTCATCACTaGTTGGCTCGTATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLLVRHH*LARILL
Trigger: GAGAAGGATACGAGCCAATCAGTGATGACGAACTAG...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGACGAGGAGAAAGCGATaGGCGCGCGGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLTRRKR*ARGSRE
Trigger: TTCCCGGGAGCCGCGCGCGCATCGCTTTCTCCTCGT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGCTGCTGTACTGCCAGTaGTGGGTCCAAGCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLLYCQ*WVQASQ
Trigger: TTGAGAGGCTTGGACCCAGCACTGGCAGTACAGCAG...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCAGGGGAGAAGATACTaGAGATGTCTTCCTATCTTT +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHQGRRY*RCLPIF
Trigger: AAAGATAGGAAGACATCTGCAGTATCTTCTCCCCTG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATTCTAGGGGAAAGGGCTaGCAAAATACCCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHSRGKG*QNTQFL
Trigger: AAGAAATTGGGTATTTTGGCAGCCCTTTCCCCTAGA...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCTCTGTCCCCGCGCCTaGACCCAGGAGGACGACGAC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAILCPRA*TQEDDD
Trigger: GTCGTCGTCCTCCTGGGTCCAGGCGCGGGGACAGAG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTCTGTATTTCGTTTCTaGGGCTCAGTGTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLSVFRF*GSVSTS
Trigger: AGACGTGGACACTGAGCCCCAGAAACGAAATACAGA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATGGTATAGGAGGGGGTaGACTAGGAGTACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPWYRRG*TRSTWS
Trigger: GGACCACGTACTCCTAGTCCACCCCCTCCTATACCA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTCATGTCCTGGAGCATaGCAAGTAGTCTTCCGCTTA +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLSCPGA*QVVFRL
Trigger: TAAGCGGAAGACTACTTGCCATGCTCCAGGACATGA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACAGCCCCCGGGATGGCTaGGAAGCAGAACCAACCCGC +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYSPRDG*EAEPTR
Trigger: GCGGGTTGGTTCTGCTTCTCAGCCATCCCGGGGGCT...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGAGGCTGGAAGAGCAGTaGCAACCATTTTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLRLEEQ*QPFSKI
Trigger: GATTTTGGAAAATGGTTGTCACTGCTCTTCCAGCCT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACACGAGGAGAAAGCGATaGGCGCGCGGCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYTRRKR*ARGSRE
Trigger: TTCCCGGGAGCCGCGCGCGCATCGCTTTCTCCTCGT...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAGCTCCCTTCGCAAGTaGAGTCCGGAGGCACCACCG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNSSLRK*SPEAPP
Trigger: CGGTGGTGCCTCCGGACTGCACTTGCGAAGGGAGCT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTGTCTTGGAGGACTCTaGTTTCTCTGGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLCLGGL*FLWGDD
Trigger: GTCGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATAAAGGAAGAATCCCTTaGTTGATCTCTGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHKGRIP*LISVVS
Trigger: AGAGACAACAGAGATCAAGCAAGGGATTCTTCCTTT...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACGGTCCCATTCTCTCTaGCTCGTATCTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPRSHSL*LVSLLS
Trigger: AGAGAGGAGAGATACGAGGCAGAGAGAATGGGACCG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGCGTGGTTCTTTTGGATaGTTTGGCATAAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLRGSFG*FGIRPD
Trigger: GTCTGGTCTTATGCCAAAGCATCCAAAAGAACCACG...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGAGGGTCAAGCGAAACTaGGTCGCAGGAAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLRVKRN*VAGRKI
Trigger: TATTTTTCTTCCTGCGACCCAGTTTCGCTTGACCCT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATGGACCGAGAATCTCTaGGATCACGGCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPWTENL*DHGSLW
Trigger: CCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTGGACCGAGAATCTCTaGGATCACGGCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLWTENL*DHGSLW
Trigger: CCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATATCATGTCCATCTCTTaGATTCCTATCTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHIMSIS*IPIFSD
Trigger: ATCCGAGAAGATAGGAATCCAAGAGATGGACATGAT...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTCTCGATCTTCAGACTaGTGGTGTCCTATAATGTCC +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLSRSSD*WCPIMS
Trigger: GGACATTATAGGACACCACCAGTCTGAAGATCGAGA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCCGAACTGTATTTCATaGGTAGCAAAATCAAACCAG +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHPNCIS*VAKSNQ
Trigger: CTGGTTTGATTTTGCTACCCATGAAATACAGTTCGG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTGTAGGTCTTTCTGGTaGCCTTCTATAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLCRSFW*PSIIAA
Trigger: AGCAGCAATTATAGAAGGTCACCAGAAAGACCTACA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAGTATCCTCCTTTCGATaGGTATCTCGACCTTCACGG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPVSSFR*VSRPSR
Trigger: CCGTGAAGGTCGAGATACTCATCGAAAGGAGGATAC...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTTTTTCTCTATCTCTTaGGCCACTGTGCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLFFSIS*ATVQYS
Trigger: AGAGTACTGCACAGTGGCTCAAGAGATAGAGAAAAA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATTTCACAGACTCTATTTaGGAACTCTCAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHFTDSI*ELSKVL
Trigger: CAGAACTTTTGAGAGTTCTCAAATAGAGTCTGTGAA...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTGCAGAATCCCGTCTaGAGCACAACGCCTTACAAC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLQNPV*STTPYN
Trigger: GTTGTAAGGCGTTGTGCTTCAGACGGGATTCTGCAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAGCAACTGGACAGACCTaGGCCGTCAGTTATGAGATA +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPATGQT*AVSYEI
Trigger: TATCTCATAACTGACGGCTCAGGTCTGTCCAGTTGC...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTAGGACCGCCTCAAAATaGCGCCGGAAGTCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCRTASK*RRKSEV
Trigger: AACCTCTGACTTCCGGCGGCATTTTGAGGCGGTCCT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAGTGTCTCTGCTGTACTaGCAGTGCTGGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKVSLLY*QCWVQA
Trigger: GGCTTGGACCCAGCACTGGCAGTACAGCAGAGACAC...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAGTGTCTCTGCTGTACTaGCAGTGCTGGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAVSLLY*QCWVQA
Trigger: GGCTTGGACCCAGCACTGGCAGTACAGCAGAGACAC...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGACGGCACTGTGTCTCTaGTGTACTGCCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKTALCL*CTASAG
Trigger: CCCAGCACTGGCAGTACAGCAGAGACACAGTGCCGT...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAAGAATGATGCTGTCCTaGTGGGGAAGTAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPRMMLS*WGSRPW
Trigger: CCAAGGTCTACTTCCCCAGCAGGACAGCATCATTCT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATACGGTTACTCCGATTaGTCCCGAGGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKYGYSD*SRGCCS
Trigger: GGAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATGAGGAGCCCCCGGGATaGCTGAGAAGCAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNEEPPG*LRSRTN
Trigger: GTTGGTTCTGCTTCTCAGCCATCCCGGGGGCTCCTC...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACAGAGCGATATCTTCTaGTATAGGAGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPQSDIF*YRRGWT
Trigger: AGTCCACCCCCTCCTATACCAGAAGATATCGCTCTG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACAGGAGTCGTGGCGGTaGCAGTATGCTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKQESWR*QYALLL
Trigger: CAGAAGCAGAGCATACTGCCACCGCCACGACTCCTG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACAGGAGTCGTGGCGGTaGCAGTATGCTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAQESWR*QYALLL
Trigger: CAGAAGCAGAGCATACTGCCACCGCCACGACTCCTG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTACTACCAGGAGTCGTaGCGGTGGCAGTATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCYYQES*RWQYAL
Trigger: CAGAGCATACTGCCACCGCCACGACTCCTGGTAGTA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTATTATTGGTGGTATTaGTGGGGGTGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLYYWWY*WGWQRW
Trigger: CCACCTCTGCCACCCCCACCAATACCACCAATAATA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTTCATTGTCTACCATTaGAGCACTCGTGTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLFIVYH*STRVSL
Trigger: CAAGCTTACACGAGTGCTCCAATGGTAGACAATGAA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGACACACAGTTCCTGTTaGATACTGGACTGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLTHSSC*ILDCES
Trigger: ACTTTCACAGTCCAGTATCCAACAGGAACTGTGTGT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGCAGCCTCAATTTCCTaGGCTCCAGCAATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCAASIS*APAILL
Trigger: CAGCAGGATTGCTGGAGCCCAGGAAATTGAGGCTGC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGACTTTGGTTGGTTTTTaGATTTCTCTGCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLTLVGF*ISLLVQ
Trigger: TTGGACCAGCAGAGAAATTCAAAAACCAACCAAAGT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATCATGGCGTCGATCATaGGACTGTGAAGTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSWRRS*DCEVRS
Trigger: TGAACGAACTTCACAGTCTCATGATCGACGCCATGA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATTCTTCGTAGCGCCTTaGACTCTCTTTCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPFFVAP*TLFPFW
Trigger: CCAGAAAGGAAAGAGAGTTCAAGGCGCTACGAAGAA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTCTTCGTAGCGCCTTaGACTCTCTTTCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLFFVAP*TLFPFW
Trigger: CCAGAAAGGAAAGAGAGTTCAAGGCGCTACGAAGAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGCTGTGCACGCATTCTTaGGCTTTCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLCTHS*AFQDFC
Trigger: ACAGAAATCCTGGAAAGCTCAAGAATGCGTGCACAG...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTCCACTTCGATGGGCTaGATCATTGGATGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRSTSMG*IIGWGA
Trigger: CGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTCTCCACGCTTTAACTaGTCAATCCTAGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLSPRFN*SILDFL
Trigger: GAGAAAATCTAGGATTGATCAGTTAAAGCGTGGAGA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTCTGACATGTTTCTTTaGCTTTGGCAAAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLSDMFL*LWQRVQ
Trigger: CTGAACTCTTTGCCAAAGTCAAAGAAACATGTCAGA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTTGGTTCTGTATGGATaGTCCAGACATAAATCCATG +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLLVLYG*SRHKSM
Trigger: CATGGATTTATGTCTGGATCATCCATACAGAACCAA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACTGCTGTACTGCCAGTaGTGGGTCCAAGCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMALLYCQ*WVQASQ
Trigger: TTGAGAGGCTTGGACCCAGCACTGGCAGTACAGCAG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATGTGTCTCTGCTGTACTaGCAGTGCTGGGTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNVSLLY*QCWVQA
Trigger: GGCTTGGACCCAGCACTGGCAGTACAGCAGAGACAC...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATACGGCACTGTGTCTCTaGTGTACTGCCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNTALCL*CTASAG
Trigger: CCCAGCACTGGCAGTACAGCAGAGACACAGTGCCGT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATTCCATAGAGGCAGTTaGCAGTCTTCAGCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPFHRGS*QSSASY
Trigger: GTAACTGGCTGAAGACTGGCAACTGCCTCTATGGAA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGAAAGGAAGAATCCCTTaGTTGATCTCTGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLKGRIP*LISVVS
Trigger: AGAGACAACAGAGATCAAGCAAGGGATTCTTCCTTT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAAGGCTTGCGATGCTGTaGATCTTCTATAGTCACGTG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPRLAML*IFYSHV
Trigger: CACGTGACTATAGAAGATGCACAGCATCGCAAGCCT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGATTGCTCCCGAGGCTaGTGCTCCTCTTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCDCSRG*CSSFDP
Trigger: TGGATCAAAAGAGGAGCAGCAGCCTCGGGAGCAATC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTACGGTTACTCCGATTaGTCCCGAGGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNYGYSD*SRGCCS
Trigger: GGAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATCTCTTGAGCCACTGTaGAGTACTCTCTTTCGACCA +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSLEPL*STLFRP
Trigger: TGGTCGAAAGAGAGTACTGCACAGTGGCTCAAGAGA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTCTCTTGAGCCACTGTaGAGTACTCTCTTTCGACCA +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLSLEPL*STLFRP
Trigger: TGGTCGAAAGAGAGTACTGCACAGTGGCTCAAGAGA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGGGGAGATTCTACCAATaGCACTTACAGAACAGATTT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLGRFYQ*HLQNRF
Trigger: AAATCTGTTCTGTAAGTGGCATTGGTAGAATCTCCC...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGGCCTCTCAAATACACTaGGTCTTCGGGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLASQIH*VFGMCY
Trigger: ATAGCACATCCCGAAGACCCAGTGTATTTGAGAGGC...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATGGTATAGGAGGGGGTaGACTAGGAGTACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKWYRRG*TRSTWS
Trigger: GGACCACGTACTCCTAGTCCACCCCCTCCTATACCA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTCCCGCTCTCGATCGTaGTCTCGGTCTCTATCCCTT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRSRSRS*SRSLSL
Trigger: AAGGGATAGAGACCGAGACCACGATCGAGAGCGGGA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGACTCTCTTTCCTTTCTaGTTTACGATCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLTLFPF*FTILLF
Trigger: AAAGAGGAGGATCGTAAACCAGAAAGGAAAGAGAGT...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTAGTAGCCACAGGCGGTaGAGGAGGAAGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSSHRR*RRKKRR
Trigger: TCTTCTCTTCTTCCTCCTCCACCGCCTGTGGCTACT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGCTCTTTCGACCACTTTaGTCATCTCCACTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLFRPL*SSPLRW
Trigger: CCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAG...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAGACCCAGATCTTGAATaGACCTGTCGATCTGACTCT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPDPDLE*TCRSDS
Trigger: AGAGTCAGATCGACAGGTCCATTCAAGATCTGGGTC...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATCGATCCCTGTTGCGTaGCCAATCTTTATCAGCATC +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSIPVA*PIFISI
Trigger: GATGCTGATAAAGATTGGCCACGCAACAGGGATCGA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTCTCCTCATCCTGTTaGTCCTCCCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLFSSSC*SSLFSA
Trigger: TGCAGAAAAGAGGGAGGACCAACAGGATGAGGAGAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CAA 72 bp CTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTaGTGCAATTATGGCAACTGGACAGACCTGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LHNSLLPAAGIQ*CNYGNWTDLSR
Trigger: ACGGCTCAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAGACGACAAAGAATGTaGAGGATAAGGAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLRRQRM*RIRRGR
Trigger: TCTGCCTCTCCTTATCCTTCACATTCTTTGTCGTCT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGATCTCTCATCTCCCTTaGGTCCCGCATGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRISHLP*VPHVSG
Trigger: TCCAGAGACATGCGGGACTCAAGGGAGATGAGAGAT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGTATCCTCCTTTCGATaGGTATCTCGACCTTCACGG +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCVSSFR*VSRPSR
Trigger: CCGTGAAGGTCGAGATACTCATCGAAAGGAGGATAC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGCTGATGTCGAATTGGTaGGCTTGGTCTTTGATCTCT +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLMSNW*AWSLIS
Trigger: AGAGATCAAAGACCAAGCTCACCAATTCGACATCAG...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACTGCTGCTCCTCTTTTaGTCCATAGGCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKLLLLF*SIGLRC
Trigger: GCATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTCCACTTCGATGGGCTaGATCATTGGATGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSTSMG*IIGWGA
Trigger: CGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGCATAGGCTAGGATGGTaGCGACAATCTGCAATTACT +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLHRLGW*RQSAIT
Trigger: AGTAATTGCAGATTGTCGTCACCATCCTAGCCTATG...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATACACAATTGGACAGTaGGGAGCAAAGTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPYTIGQ*GAKWEI
Trigger: AATCTCCCACTTTGCTCCTCACTGTCCAATTGTGTA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACCTGCCTCAACCTCCCTaGGTAGCTGTGACTACAGAC +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNLPQPP*VAVTTD
Trigger: GTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAG...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAGGACCGCCTCAAAATaGCGCCGGAAGTCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLRTASK*RRKSEV
Trigger: AACCTCTGACTTCCGGCGGCATTTTGAGGCGGTCCT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACCTGCTGTACTGCCAGTaGTGGGTCCAAGCCTCTCAA +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNLLYCQ*WVQASQ
Trigger: TTGAGAGGCTTGGACCCAGCACTGGCAGTACAGCAG...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTAGTGGCAGCAAGAGTTaGAGGCACAGTTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSGSKS*RHSCSS
Trigger: ACTGCTACAACTGTGCCTGCAACTCTTGCTGCCACT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATCCATAGGCTTGCGATaGTGTGCATCTTCTATAGTC +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSIGLR*CASSIV
Trigger: GACTATAGAAGATGCACAGCATCGCAAGCCTATGGA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGGCTGGAATCCAGTTGTaGAATTATGGCAACTGGACA +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLAGIQL*NYGNWT
Trigger: TGTCCAGTTGCCATAATTGCACAACTGGATTCCAGC...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTCAGAGCGATATCTTCTaGTATAGGAGGGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCQSDIF*YRRGWT
Trigger: AGTCCACCCCCTCCTATACCAGAAGATATCGCTCTG...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATGGGGAAGTAGACCTTaGCTTGTCTCTCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPWGSRP*LVSLFS
Trigger: AGAGAAAAGAGAGACAAGCCAAGGTCTACTTCCCCA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGCCCTTTCTCTCGCATTaGAGAGCGATGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKPFLSH*RAMSWR
Trigger: CCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGG...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACCCTTTCTCTCGCATTaGAGAGCGATGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAPFLSH*RAMSWR
Trigger: CCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCATGGGCATCACGAGTaGACCGAGAATCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRHGHHE*TENLWD
Trigger: ATCCCAGAGATTCTCGGTCCACTCGTGATGCCCATG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACATGGGCATCACGAGTaGACCGAGAATCTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAHGHHE*TENLWD
Trigger: ATCCCAGAGATTCTCGGTCCACTCGTGATGCCCATG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAACTCCGGGATTCTTCTaGATATGTATCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPTPGFF*ICILLS
Trigger: CGAAAGGAGGATACATATCCAGAAGAATCCCGGAGT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGACTCCGGGATTCTTCTaGATATGTATCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLTPGFF*ICILLS
Trigger: CGAAAGGAGGATACATATCCAGAAGAATCCCGGAGT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTCCCGCTCTCGATCGTaGTCTCGGTCTCTATCCCTT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSRSRS*SRSLSL
Trigger: AAGGGATAGAGACCGAGACCACGATCGAGAGCGGGA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTACTACCAGGAGTCGTaGCGGTGGCAGTATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLYYQES*RWQYAL
Trigger: CAGAGCATACTGCCACCGCCACGACTCCTGGTAGTA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATACTACCAGGAGTCGTaGCGGTGGCAGTATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEYYQES*RWQYAL
Trigger: CAGAGCATACTGCCACCGCCACGACTCCTGGTAGTA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAGATGGGCTGAATCATTaGATGGGGAGCGAAGACGAC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKDGLNH*MGSEDD
Trigger: GTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATC...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAGTGCATCATCTAACTTaGACTCGTCATCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPVHHLT*TRHLLP
Trigger: TGGAAGGAGATGACGAGTCCAAGTTAGATGATGCAC...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242848.8
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACTCTCGTGGTTCTTTTaGATGCTTTGGCATAAGACC +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPLSWFF*MLWHKT
Trigger: GGTCTTATGCCAAAGCATCCAAAAGAACCACGAGAG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTGTAGGTCTTTCTGGTaGCCTTCTATAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLCRSFW*PSIIAA
Trigger: AGCAGCAATTATAGAAGGTCACCAGAAAGACCTACA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATGTGAAGTTCGTTCATaGTCATGTCTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPCEVRS*SCLPFS
Trigger: AGAGAAAGGGAGACATGATCATGAACGAACTTCACA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTCATGGCGTCGATCATaGGACTGTGAAGTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSWRRS*DCEVRS
Trigger: TGAACGAACTTCACAGTCTCATGATCGACGCCATGA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGATCTCTCATCTCCCTTaGGTCCCGCATGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLISHLP*VPHVSG
Trigger: TCCAGAGACATGCGGGACTCAAGGGAGATGAGAGAT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATATCTCTCATCTCCCTTaGGTCCCGCATGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNISHLP*VPHVSG
Trigger: TCCAGAGACATGCGGGACTCAAGGGAGATGAGAGAT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTCGTCATTCCTTCCCTaGTGTCGAATTGGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSSFLP*CRIGEL
Trigger: AAGCTCACCAATTCGACATCAGGGAAGGAATGACGA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTTCTTCGTAGCGCCTTaGACTCTCTTTCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCFFVAP*TLFPFW
Trigger: CCAGAAAGGAAAGAGAGTTCAAGGCGCTACGAAGAA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAAGAAACTTTCTCCTTaGGTTCCTGTTCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLKKLSP*VPVLRS
Trigger: GCTACGAAGAACAGGAACTCAAGGAGAAAGTTTCTT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATCTGCTGCTCCTCTTTTaGTCCATAGGCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNLLLLF*SIGLRC
Trigger: GCATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAG...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGAGACGACCAGACGTATaGCTACGGTTACTCCGATTG +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRRRPDV*LRLLRL
Trigger: CAATCGGAGTAACCGTAGTCATACGTCTGGTCGTCT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAAGACGACCAGACGTATaGCTACGGTTACTCCGATTG +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMARRPDV*LRLLRL
Trigger: CAATCGGAGTAACCGTAGTCATACGTCTGGTCGTCT...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTCTAGTTCGTCATCACTaGTTGGCTCGTATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCLVRHH*LARILL
Trigger: GAGAAGGATACGAGCCAATCAGTGATGACGAACTAG...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATTGCAGAATCCCGTCTaGAGCACAACGCCTTACAAC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMALQNPV*STTPYN
Trigger: GTTGTAAGGCGTTGTGCTTCAGACGGGATTCTGCAA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACAGGACCGCCTCAAAATaGCGCCGGAAGTCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNRTASK*RRKSEV
Trigger: AACCTCTGACTTCCGGCGGCATTTTGAGGCGGTCCT...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGAGAATGATGCTGTCCTaGTGGGGAAGTAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRRMMLS*WGSRPW
Trigger: CCAAGGTCTACTTCCCCAGCAGGACAGCATCATTCT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATGTCTTGGAGGACTCTaGTTTCTCTGGGGAGACGAC +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDECLGGL*FLWGDD
Trigger: GTCGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACTGTCTTCTGTGAGGTaGGAGGGACTAAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKLSSVR*EGLRER
Trigger: TCGTTCTCTTAGTCCCTCGCACCTCACAGAAGACAG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACTGTCTTCTGTGAGGTaGGAGGGACTAAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMALSSVR*EGLRER
Trigger: TCGTTCTCTTAGTCCCTCGCACCTCACAGAAGACAG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAAGTGGCAGCAAGAGTTaGAGGCACAGTTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMASGSKS*RHSCSS
Trigger: ACTGCTACAACTGTGCCTGCAACTCTTGCTGCCACT...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTCTCTTGAGCCACTGTaGAGTACTCTCTTTCGACCA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSLEPL*STLFRP
Trigger: TGGTCGAAAGAGAGTACTGCACAGTGGCTCAAGAGA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACCGGTCCCATTCTCTCTaGCTCGTATCTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNRSHSL*LVSLLS
Trigger: AGAGAGGAGAGATACGAGGCAGAGAGAATGGGACCG...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATTCACCTTCCAGTTTTaGTTCACAGCGTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPFTFQF*FTAFHR
Trigger: TCTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACTGTACTGCCAGTGCTaGGTCCAAGCCTCTCAAATA +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKLYCQC*VQASQI
Trigger: TATTTGAGAGGCTTGGACCCAGCACTGGCAGTACAG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTCTGTATTTCGTTTCTaGGGCTCAGTGTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSVFRF*GSVSTS
Trigger: AGACGTGGACACTGAGCCCCAGAAACGAAATACAGA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTGGTATAGGAGGGGGTaGACTAGGAGTACGTGGTCC +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYWYRRG*TRSTWS
Trigger: GGACCACGTACTCCTAGTCCACCCCCTCCTATACCA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGATGATGCTGTCCTGCTaGGGAAGTAGACCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRMMLSC*GSRPWL
Trigger: AAGCCAAGGTCTACTTCCCCAGCAGGACAGCATCAT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTGGAGAGCGATGTCTTaGAGGACTCTGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKWRAMS*RTLLSL
Trigger: CAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATCCCTTTCTCTCGCATTaGAGAGCGATGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNPFLSH*RAMSWR
Trigger: CCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGG...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTGGACCGAGAATCTCTaGGATCACGGCTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNWTENL*DHGSLW
Trigger: CCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTCCCGCTCTCGATCGTaGTCTCGGTCTCTATCCCTT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNSRSRS*SRSLSL
Trigger: AAGGGATAGAGACCGAGACCACGATCGAGAGCGGGA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCAGGAGTCGTGGCGGTaGCAGTATGCTCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYQESWR*QYALLL
Trigger: CAGAAGCAGAGCATACTGCCACCGCCACGACTCCTG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAGTAGCCACAGGCGGTaGAGGAGGAAGAAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSSHRR*RRKKRR
Trigger: TCTTCTCTTCTTCCTCCTCCACCGCCTGTGGCTACT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTATTATTGGTGGTATTaGTGGGGGTGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRYYWWY*WGWQRW
Trigger: CCACCTCTGCCACCCCCACCAATACCACCAATAATA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTCATCTCCACTTCGATaGGCTGAATCATTGGATGGG +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSSPLR*AESLDG
Trigger: CCCATCCAATGATTCAGCCCATCGAAGTGGAGATGA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAAAGAAGTACTTCGACTaGGTTCTCCACGCTTTAACT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPKKYFD*VLHALT
Trigger: AGTTAAAGCGTGGAGAACCCAGTCGAAGTACTTCTT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGACCCAGATCTTGAATaGACCTGTCGATCTGACTCT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCDPDLE*TCRSDS
Trigger: AGAGTCAGATCGACAGGTCCATTCAAGATCTGGGTC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAGCCCCAGGCTCTCGTaGTTCTTTTGGATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNSPRLS*FFWMLW
Trigger: CCAAAGCATCCAAAAGAACCACGAGAGCCTGGGGCT...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAGCCCCAGGCTCTCGTaGTTCTTTTGGATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNSPRLS*FFWMLW
Trigger: CCAAAGCATCCAAAAGAACCACGAGAGCCTGGGGCT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGGATTGTCTGCATCTTTaGGTTTTTCTAAAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLDCLHL*VFLKVS
Trigger: AGAGACTTTTAGAAAAACCCAAAGATGCAGACAATC...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACAACGCCTTACAACATaGGCCAAGATTACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPQRLTT*AKITKK
Trigger: CTTCTTAGTAATCTTGGCCCATGTTGTAAGGCGTTG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACACCTTTACCACGAGGTaGAGGGCCATGTACGAATCT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNTFTTR*RAMYES
Trigger: AGATTCGTACATGGCCCTTCACCTCGTGGTAAAGGT...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGAGACGACTTCGGGCTTaGTTTTCGCTTCGGAGATTT +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKRRLRA*FSLRRF
Trigger: AAATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCT...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTGTGAGGAAGATGAGTaGTGTCTAGAAGATATAGGA +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLCEEDE*CLEDIG
Trigger: TCCTATATCTTCTAGACATCACTCATCTTCCTCACA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCCGCTGATAAGATGGTaGAGGAGTTCTTTTTCGACG +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRPLIRW*RSSFST
Trigger: CGTCGAAAAAGAACTCCTTCACCATCTTATCAGCGG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGGTATCCTCCTTTCGATaGGTATCTCGACCTTCACGG +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLVSSFR*VSRPSR
Trigger: CCGTGAAGGTCGAGATACTCATCGAAAGGAGGATAC...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAAGAGAACGAGATTCTTaGGGTCGTACAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKRERDS*GRTTWL
Trigger: GAGCCAAGTTGTACGACCTCAAGAATCTCGTTCTCT...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCTGTGCACGCATTCTTaGGCTTTCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRLCTHS*AFQDFC
Trigger: ACAGAAATCCTGGAAAGCTCAAGAATGCGTGCACAG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATTCTTGTTTTCATCATaGGCTCGATCAGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPFLFSS*ARSDVS
Trigger: AGAGACATCTGATCGAGCTCATGATGAAAACAAGAA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCTGCTGCTCCTCTTTTaGTCCATAGGCTTGCGATGC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAILLLLF*SIGLRC
Trigger: GCATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAGACGACCAGACGTATaGCTACGGTTACTCCGATTG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNRRPDV*LRLLRL
Trigger: CAATCGGAGTAACCGTAGTCATACGTCTGGTCGTCT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTCCACTTCGATGGGCTaGATCATTGGATGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYSTSMG*IIGWGA
Trigger: CGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATCTCCACGCTTTAACTaGTCAATCCTAGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSPRFN*SILDFL
Trigger: GAGAAAATCTAGGATTGATCAGTTAAAGCGTGGAGA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGATGGACCTGTCGATCTaGCTCTGGAGAACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKMDLSI*LWRTSS
Trigger: AGAAGAAGTTCTCCAGAGTCAGATCGACAGGTCCAT...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATTGGTTCTGTATGGATaGTCCAGACATAAATCCATG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPLVLYG*SRHKSM
Trigger: CATGGATTTATGTCTGGATCATCCATACAGAACCAA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTCTGAATGCTGTGACTaGGTGAACAAAGGAATAGTT +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLSECCD*VNKGIV
Trigger: AACTATTCCTTTGTTCACTCAGTCACAGCATTCAGA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACAGAGTGAAGCGAAGTaGCAGGTCAGATTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAQSEAK*QVRFFS
Trigger: GCTGAAAAATCTGACCTGTCACTTCGCTTCACTCTG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTTCCATAGAGGCAGTTaGCAGTCTTCAGCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKFHRGS*QSSASY
Trigger: GTAACTGGCTGAAGACTGGCAACTGCCTCTATGGAA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAGAATGATGCTGTCCTaGTGGGGAAGTAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNRMMLS*WGSRPW
Trigger: CCAAGGTCTACTTCCCCAGCAGGACAGCATCATTCT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTCTCTTTGGTATCTCTaGTATAATCTCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLSLWYL*YNLSSP
Trigger: GGGAGATGAGAGATTATAGCAGAGATACCAAAGAGA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCGGTCCCATTCTCTCTaGCTCGTATCTCTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNRSHSL*LVSLLS
Trigger: AGAGAGGAGAGATACGAGGCAGAGAGAATGGGACCG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTCGTGGTTCTTTTGGATaGTTTGGCATAAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCRGSFG*FGIRPD
Trigger: GTCTGGTCTTATGCCAAAGCATCCAAAAGAACCACG...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGGCCTCTCAAATACACTaGGTCTTCGGGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKASQIH*VFGMCY
Trigger: ATAGCACATCCCGAAGACCCAGTGTATTTGAGAGGC...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACTGTACTGCCAGTGCTaGGTCCAAGCCTCTCAAATA +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDELYCQC*VQASQI
Trigger: TATTTGAGAGGCTTGGACCCAGCACTGGCAGTACAG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTACTCCGGGATTCTTCTaGATATGTATCCTCCTTTCG +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCTPGFF*ICILLS
Trigger: CGAAAGGAGGATACATATCCAGAAGAATCCCGGAGT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATTCGAGACTCATTTCTaGACTCATTCCTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPFETHF*THSLFP
Trigger: CGGAAATAAGGAATGAGTCCAGAAATGAGTCTCGAA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTGATGGGCTGAATCATTaGATGGGGAGCGAAGACGAC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIDGLNH*MGSEDD
Trigger: GTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATC...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATCGATCCCTGTTGCGTaGCCAATCTTTATCAGCATC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMASIPVA*PIFISI
Trigger: GATGCTGATAAAGATTGGCCACGCAACAGGGATCGA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTCGATCCCTGTTGCGTaGCCAATCTTTATCAGCATC +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRSIPVA*PIFISI
Trigger: GATGCTGATAAAGATTGGCCACGCAACAGGGATCGA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTTCTCCTCATCCTGTTaGTCCTCCCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRFSSSC*SSLFSA
Trigger: TGCAGAAAAGAGGGAGGACCAACAGGATGAGGAGAA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACAGCCCCAGGCTCTCGTaGTTCTTTTGGATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYSPRLS*FFWMLW
Trigger: CCAAAGCATCCAAAAGAACCACGAGAGCCTGGGGCT...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATGCAATTATGGCAACTaGACAGACCTGAGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDECNYGN*TDLSRQ
Trigger: CTGACGGCTCAGGTCTGTCCAGTTGCCATAATTGCA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CAA 72 bp ATCACTTTGTTAAAGACTCAACCTACACACCTGCATTaGGGTAGATGTCTAGGGGAAAGGGCTGCCAAAATA +
Preference number: 4 (lower is better)
Translates to: ITLLKTQPTHLH*GRCLGERAAKI
Trigger: TATTTTGGCAGCCCTTTCCCCTAGACATCTACCCAAATGCAGGTGTGTAGGTTGAGTCTTTAACAAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTACCTTTACCACGAGGTaGAGGGCCATGTACGAATCT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAITFTTR*RAMYES
Trigger: AGATTCGTACATGGCCCTTCACCTCGTGGTAAAGGT...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCCTATGTCTCCCTCTTaGAGATTCTTTCCTAACAGG +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRPMSPS*RFFPNR
Trigger: CCTGTTAGGAAAGAATCTTCAAGAGGGAGACATAGG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATCCCTCTGTATCTTCTaGCGCTTCATTTCCAATGAC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKSLCIF*RFISND
Trigger: GTCATTGGAAATGAAGCGTCAGAAGATACAGAGGGA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAGAAGGAGAATGTCTTTaGATAGATGATCCTGATTGT +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPEGECL*IDDPDC
Trigger: ACAATCAGGATCATCTATTCAAAGACATTCTCCTTC...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAAGACGACAAAGAATGTaGAGGATAAGGAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKRRQRM*RIRRGR
Trigger: TCTGCCTCTCCTTATCCTTCACATTCTTTGTCGTCT...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGAATTTGAGAACCTCTTaGGCCTCGACTTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRNLRTS*ASTSLF
Trigger: GAAAAGGGAAGTCGAGGCTCAAGAGGTTCTCAAATT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAAATTTGAGAACCTCTTaGGCCTCGACTTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMANLRTS*ASTSLF
Trigger: GAAAAGGGAAGTCGAGGCTCAAGAGGTTCTCAAATT...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCTGATGTCGAATTGGTaGGCTTGGTCTTTGATCTCT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRLMSNW*AWSLIS
Trigger: AGAGATCAAAGACCAAGCTCACCAATTCGACATCAG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTCGTCATTCCTTCCCTaGTGTCGAATTGGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSSFLP*CRIGEL
Trigger: AAGCTCACCAATTCGACATCAGGGAAGGAATGACGA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTCTATAGCGCTTCTTTaGTTTTCTTTCATCATGTCC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLSIALL*FSFIMS
Trigger: GGACATGATGAAAGAAAATCAAAGAAGCGCTATAGA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAGAGAACGAGATTCTTaGGGTCGTACAACTTGGCTC +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNRERDS*GRTTWL
Trigger: GAGCCAAGTTGTACGACCTCAAGAATCTCGTTCTCT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTAAGAAACTTTCTCCTTaGGTTCCTGTTCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCKKLSP*VPVLRS
Trigger: GCTACGAAGAACAGGAACTCAAGGAGAAAGTTTCTT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTCTTCTATAGTCACGTaGGGCGTCTCTACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSSIVT*GVSTFS
Trigger: AGAAAAAGTAGAGACGCCTCACGTGACTATAGAAGA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATATGGACCTGTCGATCTaGCTCTGGAGAACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNMDLSI*LWRTSS
Trigger: AGAAGAAGTTCTCCAGAGTCAGATCGACAGGTCCAT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATATCGATCTCGTTCTTaGAGCCTGTCTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKYRSRS*SLSLLS
Trigger: TGATAGCAGAGACAGGCTTCAAGAACGAGATCGATA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAATTACTGGTCAGAGTaGAGCGAAGTGACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLNYWSE*SEVTGQ
Trigger: CTGACCTGTCACTTCGCTTCACTCTGACCAGTAATT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAGTGACCTTCTATAATTaGTGCTATAACCTTTACCAC +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPVTFYN*CYNLYH
Trigger: GTGGTAAAGGTTATAGCAGCAATTATAGAAGGTCAC...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTAGTGGCAGCAAGAGTTaGAGGCACAGTTGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISGSKS*RHSCSS
Trigger: ACTGCTACAACTGTGCCTGCAACTCTTGCTGCCACT...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAGGCTTGCGATGCTGTaGATCTTCTATAGTCACGTG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNRLAML*IFYSHV
Trigger: CACGTGACTATAGAAGATGCACAGCATCGCAAGCCT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAGGCTTGCGATGCTGTaGATCTTCTATAGTCACGTG +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNRLAML*IFYSHV
Trigger: CACGTGACTATAGAAGATGCACAGCATCGCAAGCCT...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACGATTGCTCCCGAGGCTaGTGCTCCTCTTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYDCSRG*CSSFDP
Trigger: TGGATCAAAAGAGGAGCAGCAGCCTCGGGAGCAATC...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAGAGAGTCTCGGGAAGTaGTTTCTAGATCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAESLGK*FLDPFH
Trigger: ATGAAAGGGATCTAGAAAGCACTTCCCGAGACTCTC...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAGAGAGTCTCGGGAAGTaGTTTCTAGATCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKESLGK*FLDPFH
Trigger: ATGAAAGGGATCTAGAAAGCACTTCCCGAGACTCTC...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTCTGTATTTCGTTTCTaGGGCTCAGTGTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSVFRF*GSVSTS
Trigger: AGACGTGGACACTGAGCCCCAGAAACGAAATACAGA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATGGGGAAGTAGACCTTaGCTTGTCTCTCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKWGSRP*LVSLFS
Trigger: AGAGAAAAGAGAGACAAGCCAAGGTCTACTTCCCCA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACATGATGCTGTCCTGCTaGGGAAGTAGACCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNMMLSC*GSRPWL
Trigger: AAGCCAAGGTCTACTTCCCCAGCAGGACAGCATCAT...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTGGAGAGCGATGTCTTaGAGGACTCTGCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYWRAMS*RTLLSL
Trigger: CAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGATCACGGCTCTCTTTaGTATCTCTGCTATAATCTC +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCDHGSL*YLCYNL
Trigger: GAGATTATAGCAGAGATACCAAAGAGAGCCGTGATC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATGTGTGAGTCTTCATTaGCAAAAGTATTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPCVSLH*QKYYWW
Trigger: CCACCAATAATACTTTTGCCAATGAAGACTCACACA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACGATGGGCTGAATCATTaGATGGGGAGCGAAGACGAC +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYDGLNH*MGSEDD
Trigger: GTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATC...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTCTTCTTCTTGAACTATaGCTTCTTGAATCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCLLLEL*LLESWR
Trigger: TCGCCAGGATTCAAGAAGCCATAGTTCAAGAAGAAG...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTCGTCATCACTGATTaGCTCGTATCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEFVITD*LVSFSS
Trigger: GCTGGAGAAGGATACGAGCCAATCAGTGATGACGAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTTCGTCATCACTGATTaGCTCGTATCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNFVITD*LVSFSS
Trigger: GCTGGAGAAGGATACGAGCCAATCAGTGATGACGAA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTTCTCCTCATCCTGTTaGTCCTCCCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNFSSSC*SSLFSA
Trigger: TGCAGAAAAGAGGGAGGACCAACAGGATGAGGAGAA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCTCTCGTGGTTCTTTTaGATGCTTTGGCATAAGACC +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRLSWFF*MLWHKT
Trigger: GGTCTTATGCCAAAGCATCCAAAAGAACCACGAGAG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACTCTCGTGGTTCTTTTaGATGCTTTGGCATAAGACC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMALSWFF*MLWHKT
Trigger: GGTCTTATGCCAAAGCATCCAAAAGAACCACGAGAG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTCATGTCCTGGAGCATaGCAAGTAGTCTTCCGCTTA +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNSCPGA*QVVFRL
Trigger: TAAGCGGAAGACTACTTGCCATGCTCCAGGACATGA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAGTGCATCATCTAACTTaGACTCGTCATCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAVHHLT*TRHLLL
Trigger: AAGCAGGAGATGACGAGTCCAAGTTAGATGATGCAC...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679008.1
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACCTATGTCTCCCTCTTaGAGATTCTTTCCTAACAGG +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEPMSPS*RFFPNR
Trigger: CCTGTTAGGAAAGAATCTTCAAGAGGGAGACATAGG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACAGACGACTTCGGGCTTaGTTTTCGCTTCGGAGATTT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNRRLRA*FSLRRF
Trigger: AAATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCT...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTGTGAGGAAGATGAGTaGTGTCTAGAAGATATAGGA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCCEEDE*CLEDIG
Trigger: TCCTATATCTTCTAGACATCACTCATCTTCCTCACA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCCGCTGATAAGATGGTaGAGGAGTTCTTTTTCGACG +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNPLIRW*RSSFST
Trigger: CGTCGAAAAAGAACTCCTTCACCATCTTATCAGCGG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAAAGACGACAAAGAATGTaGAGGATAAGGAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDERRQRM*RIRRGR
Trigger: TCTGCCTCTCCTTATCCTTCACATTCTTTGTCGTCT...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTCGATCATGAGACTGTaGAGTTCGTTCATGATCATG +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKSIMRL*SSFMIM
Trigger: CATGATCATGAACGAACTTCACAGTCTCATGATCGA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCATGGCGTCGATCATaGGACTGTGAAGTTCGTTCA +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISWRRS*DCEVRS
Trigger: TGAACGAACTTCACAGTCTCATGATCGACGCCATGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACTGATGTCGAATTGGTaGGCTTGGTCTTTGATCTCT +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDELMSNW*AWSLIS
Trigger: AGAGATCAAAGACCAAGCTCACCAATTCGACATCAG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCTGTGCACGCATTCTTaGGCTTTCCAGGATTTCTGT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYLCTHS*AFQDFC
Trigger: ACAGAAATCCTGGAAAGCTCAAGAATGCGTGCACAG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATCTTCTATAGTCACGTaGGGCGTCTCTACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMASSIVT*GVSTFS
Trigger: AGAAAAAGTAGAGACGCCTCACGTGACTATAGAAGA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATTTTTCTCTATCTCTTaGGCCACTGTGCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKFFSIS*ATVQYS
Trigger: AGAGTACTGCACAGTGGCTCAAGAGATAGAGAAAAA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACATGGACCTGTCGATCTaGCTCTGGAGAACTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYMDLSI*LWRTSS
Trigger: AGAAGAAGTTCTCCAGAGTCAGATCGACAGGTCCAT...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTATCGATCTCGTTCTTaGAGCCTGTCTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNYRSRS*SLSLLS
Trigger: TGATAGCAGAGACAGGCTTCAAGAACGAGATCGATA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCTAGTTCGTCATCACTaGTTGGCTCGTATCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAILVRHH*LARILL
Trigger: GAGAAGGATACGAGCCAATCAGTGATGACGAACTAG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACTTGTGAAATATCCCTaGAGTCAGTGGACAAATGGG +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDELVKYP*SQWTNG
Trigger: CCCATTTGTCCACTGACTTCAGGGATATTTCACAAG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGCTTGTGAAATATCCCTaGAGTCAGTGGACAAATGGG +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLLVKYP*SQWTNG
Trigger: CCCATTTGTCCACTGACTTCAGGGATATTTCACAAG...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACGCAACTGGACAGACCTaGGCCGTCAGTTATGAGATA +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYATGQT*AVSYEI
Trigger: TATCTCATAACTGACGGCTCAGGTCTGTCCAGTTGC...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCAGAGTGAAGCGAAGTaGCAGGTCAGATTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYQSEAK*QVRFFS
Trigger: GCTGAAAAATCTGACCTGTCACTTCGCTTCACTCTG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTAATTACTGGTCAGAGTaGAGCGAAGTGACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAINYWSE*SEVTGQ
Trigger: CTGACCTGTCACTTCGCTTCACTCTGACCAGTAATT...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATCATAGGCTAGGATGGTaGCGACAATCTGCAATTACT +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNHRLGW*RQSAIT
Trigger: AGTAATTGCAGATTGTCGTCACCATCCTAGCCTATG...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTAGGAAGTTGGTGGTATaGTTATTCCTGACTTACAGA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCRKLVV*LFLTYR
Trigger: TCTGTAAGTCAGGAATAATCATACCACCAACTTCCT...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTTCCATAGAGGCAGTTaGCAGTCTTCAGCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIFHRGS*QSSASY
Trigger: GTAACTGGCTGAAGACTGGCAACTGCCTCTATGGAA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACAGGGGAGAAGATACTaGAGATGTCTTCCTATCTTT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAQGRRY*RCLPIF
Trigger: AAAGATAGGAAGACATCTGCAGTATCTTCTCCCCTG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAGTTTTTGAATTTCTCTaGTGGTCCAACAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAVFEFL*WSNRGE
Trigger: TTCTCCCCTGTTGGACCAGCAGAGAAATTCAAAAAC...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTCTCTTTGGTATCTCTaGTATAATCTCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCSLWYL*YNLSSP
Trigger: GGGAGATGAGAGATTATAGCAGAGATACCAAAGAGA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTATCTCGATCCCTGTTaGGTGGCCAATCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLYLDPC*VANLYQ
Trigger: CTGATAAAGATTGGCCACGCAACAGGGATCGAGATA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTTCACCTTCCAGTTTTaGTTCACAGCGTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKFTFQF*FTAFHR
Trigger: TCTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAAGCTGCTTTCGAATTaGAGAATCCCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLKLLSN*RIPSEA
Trigger: TGCTTCAGACGGGATTCTGCAATTCGAAAGCAGCTT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGGCTGGAATCCAGTTGTaGAATTATGGCAACTGGACA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLAGIQL*NYGNWT
Trigger: TGTCCAGTTGCCATAATTGCACAACTGGATTCCAGC...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAGGGTCAAGCGAAACTaGGTCGCAGGAAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLRVKRN*VAGRKI
Trigger: TATTTTTCTTCCTGCGACCCAGTTTCGCTTGACCCT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGCCTCTCAAATACACTaGGTCTTCGGGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYASQIH*VFGMCY
Trigger: ATAGCACATCCCGAAGACCCAGTGTATTTGAGAGGC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCTGTACTGCCAGTGCTaGGTCCAAGCCTCTCAAATA +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYLYCQC*VQASQI
Trigger: TATTTGAGAGGCTTGGACCCAGCACTGGCAGTACAG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTCAGTGTCCACGTCTTaGCGCTTGTTCTTCATTCTT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSVSTS*RLFFIL
Trigger: AAGAATGAAGAACAAGCGCCAAGACGTGGACACTGA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTCAGTGTCCACGTCTTaGCGCTTGTTCTTCATTCTT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNSVSTS*RLFFIL
Trigger: AAGAATGAAGAACAAGCGCCAAGACGTGGACACTGA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATTTGAATTTCTCTGCTaGTCCAACAGGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAFEFLC*SNRGED
Trigger: ATCTTCTCCCCTGTTGGACCAGCAGAGAAATTCAAA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTGGACTAGGAGTACGTaGTCCTTTCTTTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCWTRST*SFLFTL
Trigger: CAAAGTAAAAAGAAAGGACCACGTACTCCTAGTCCA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTGGACTCTGCTTTCTCTaGGGAGACGACAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIGLCFL*GDDKEC
Trigger: ACATTCTTTGTCGTCTCCCCAGAGAAAGCAGAGTCC...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACGGACTCTGCTTTCTCTaGGGAGACGACAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNGLCFL*GDDKEC
Trigger: ACATTCTTTGTCGTCTCCCCAGAGAAAGCAGAGTCC...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACAAAAGTATTATTGGTaGTATTGGTGGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEQKYYW*YWWGWQ
Trigger: CTGCCACCCCCACCAATACCACCAATAATACTTTTG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTGGCAAAAGTATTATTaGTGGTATTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNWQKYY*WYWWGW
Trigger: CCACCCCCACCAATACCACCAATAATACTTTTGCCA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTCATCTCCACTTCGATaGGCTGAATCATTGGATGGG +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYSSPLR*AESLDG
Trigger: CCCATCCAATGATTCAGCCCATCGAAGTGGAGATGA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCATCTCCACTTCGATaGGCTGAATCATTGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISSPLR*AESLDG
Trigger: CCCATCCAATGATTCAGCCCATCGAAGTGGAGATGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCTCTTTCGACCACTTTaGTCATCTCCACTTCGATGG +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYLFRPL*SSPLRW
Trigger: CCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGAAGAAGTACTTCGACTaGGTTCTCCACGCTTTAACT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRKKYFD*VLHALT
Trigger: AGTTAAAGCGTGGAGAACCCAGTCGAAGTACTTCTT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTGGCTTCTTGAATCCTaGCGATCTGAAGAAGTACTT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRWLLES*RSEEVL
Trigger: AAGTACTTCTTCAGATCGCCAGGATTCAAGAAGCCA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACGACCCAGATCTTGAATaGACCTGTCGATCTGACTCT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNDPDLE*TCRSDS
Trigger: AGAGTCAGATCGACAGGTCCATTCAAGATCTGGGTC...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGGTTCCTGTTGGATACTaGACTGTGAAAGTTTATTAT +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLVPVGY*TVKVYY
Trigger: ATAATAAACTTTCACAGTCCAGTATCCAACAGGAAC...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTCACTCTTTTAGCATaGCTGATAAATCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLFTLLA*LINLFC
Trigger: GCAGAAAAGATTTATCAGCCATGCTAAAAGAGTGAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAGCATTCCCTTTCACGTaGTCTGTACAACATAGTACT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAAFPFT*SVQHST
Trigger: AGTACTATGTTGTACAGACCACGTGAAAGGGAATGC...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCCAGTTGTGCAATTATaGCAACTGGACAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNPVVQL*QLDRPE
Trigger: CTCAGGTCTGTCCAGTTGCCATAATTGCACAACTGG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGTGCATCATCTAACTTaGACTCGTCATCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNVHHLT*TRHLLL
Trigger: AAGCAGGAGATGACGAGTCCAAGTTAGATGATGCAC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTGTAGGTCTTTCTGGTaGCCTTCTATAATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNCRSFW*PSIIAA
Trigger: AGCAGCAATTATAGAAGGTCACCAGAAAGACCTACA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTCCCTCTGTATCTTCTaGCGCTTCATTTCCAATGAC +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYSLCIF*RFISND
Trigger: GTCATTGGAAATGAAGCGTCAGAAGATACAGAGGGA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGACTTTGGTTGGTTTTTaGATTTCTCTGCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRTLVGF*ISLLVQ
Trigger: TTGGACCAGCAGAGAAATTCAAAAACCAACCAAAGT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGAAGGAGAATGTCTTTaGATAGATGATCCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCEGECL*IDDPDC
Trigger: ACAATCAGGATCATCTATTCAAAGACATTCTCCTTC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCCGCTGATAAGATGGTaGAGGAGTTCTTTTTCGACG +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYPLIRW*RSSFST
Trigger: CGTCGAAAAAGAACTCCTTCACCATCTTATCAGCGG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTGTGAAGTTCGTTCATaGTCATGTCTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLCEVRS*SCLPFS
Trigger: AGAGAAAGGGAGACATGATCATGAACGAACTTCACA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTGTGAAGTTCGTTCATaGTCATGTCTCCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNCEVRS*SCLPFS
Trigger: AGAGAAAGGGAGACATGATCATGAACGAACTTCACA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTCGATCATGAGACTGTaGAGTTCGTTCATGATCATG +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNSIMRL*SSFMIM
Trigger: CATGATCATGAACGAACTTCACAGTCTCATGATCGA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATCGATCATGAGACTGTaGAGTTCGTTCATGATCATG +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDESIMRL*SSFMIM
Trigger: CATGATCATGAACGAACTTCACAGTCTCATGATCGA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTAATTTGAGAACCTCTTaGGCCTCGACTTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAINLRTS*ASTSLF
Trigger: GAAAAGGGAAGTCGAGGCTCAAGAGGTTCTCAAATT...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACATCAGACCAGTCACTaGATGCTGTATCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKHQTSH*MLYLLF
Trigger: AAAAAGAAGATACAGCATTCAGTGACTGGTCTGATG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTTTTCTCTATCTCTTaGGCCACTGTGCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEFFSIS*ATVQYS
Trigger: AGAGTACTGCACAGTGGCTCAAGAGATAGAGAAAAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTCTCCACGCTTTAACTaGTCAATCCTAGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKSPRFN*SILDFL
Trigger: GAGAAAATCTAGGATTGATCAGTTAAAGCGTGGAGA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATCTGACATGTTTCTTTaGCTTTGGCAAAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMASDMFL*LWQRVQ
Trigger: CTGAACTCTTTGCCAAAGTCAAAGAAACATGTCAGA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTCTGACATGTTTCTTTaGCTTTGGCAAAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKSDMFL*LWQRVQ
Trigger: CTGAACTCTTTGCCAAAGTCAAAGAAACATGTCAGA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTGTAATGCAGCCATATTaGGAGCCCCCAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIVMQPY*EPPIHV
Trigger: AACATGAATTGGGGGCTCTCAATATGGCTGCATTAC...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGTAATGCAGCCATATTaGGAGCCCCCAATTCATGTT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYVMQPY*EPPIHV
Trigger: AACATGAATTGGGGGCTCTCAATATGGCTGCATTAC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGTTTTTGAATTTCTCTaGTGGTCCAACAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNVFEFL*WSNRGE
Trigger: TTCTCCCCTGTTGGACCAGCAGAGAAATTCAAAAAC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCTTGAAGCCTGTCTCTaGTATCAAATGACCCAGATC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAILEACL*YQMTQI
Trigger: GATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCTTGAAGCCTGTCTCTaGTATCAAATGACCCAGATC +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYLEACL*YQMTQI
Trigger: GATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTATCTCGATCCCTGTTaGGTGGCCAATCTTTATCAG +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNYLDPC*VANLYQ
Trigger: CTGATAAAGATTGGCCACGCAACAGGGATCGAGATA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTTCACCTTCCAGTTTTaGTTCACAGCGTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNFTFQF*FTAFHR
Trigger: TCTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGAGAGTCTCGGGAAGTaGTTTCTAGATCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYESLGK*FLDPFH
Trigger: ATGAAAGGGATCTAGAAAGCACTTCCCGAGACTCTC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAGTTTCTTCAAATCCCTaGACAGATCCCAGATCTTTA +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKVSSNP*TDPRSL
Trigger: TAAAGATCTGGGATCTGTGCAGGGATTTGAAGAAAC...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCGTGGTTCTTTTGGATaGTTTGGCATAAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNRGSFG*FGIRPD
Trigger: GTCTGGTCTTATGCCAAAGCATCCAAAAGAACCACG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCAGTGTCCACGTCTTaGCGCTTGTTCTTCATTCTT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISVSTS*RLFFIL
Trigger: AAGAATGAAGAACAAGCGCCAAGACGTGGACACTGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTTTGAATTTCTCTGCTaGTCCAACAGGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNFEFLC*SNRGED
Trigger: ATCTTCTCCCCTGTTGGACCAGCAGAGAAATTCAAA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTTGAATTTCTCTGCTaGTCCAACAGGGGAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEFEFLC*SNRGED
Trigger: ATCTTCTCCCCTGTTGGACCAGCAGAGAAATTCAAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTGGGGAAGTAGACCTTaGCTTGTCTCTCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYWGSRP*LVSLFS
Trigger: AGAGAAAAGAGAGACAAGCCAAGGTCTACTTCCCCA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATTCGAGACTCATTTCTaGACTCATTCCTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKFETHF*THSLFP
Trigger: CGGAAATAAGGAATGAGTCCAGAAATGAGTCTCGAA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGACTCTCTTTCCTTTCTaGTTTACGATCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRTLFPF*FTILLF
Trigger: AAAGAGGAGGATCGTAAACCAGAAAGGAAAGAGAGT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCGATCTTCAGACTGGTaGTGTCCTATAATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNRSSDW*CPIMSC
Trigger: ACAGGACATTATAGGACACCACCAGTCTGAAGATCG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCTCGATCTTCAGACTaGTGGTGTCCTATAATGTCC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISRSSD*WCPIMS
Trigger: GGACATTATAGGACACCACCAGTCTGAAGATCGAGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTGGCAAAAGTATTATTaGTGGTATTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYWQKYY*WYWWGW
Trigger: CCACCCCCACCAATACCACCAATAATACTTTTGCCA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTGGCAAAAGTATTATTaGTGGTATTGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIWQKYY*WYWWGW
Trigger: CCACCCCCACCAATACCACCAATAATACTTTTGCCA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAAAAGAAGTACTTCGACTaGGTTCTCCACGCTTTAACT +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEKKYFD*VLHALT
Trigger: AGTTAAAGCGTGGAGAACCCAGTCGAAGTACTTCTT...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTGGCTTCTTGAATCCTaGCGATCTGAAGAAGTACTT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLWLLES*RSEEVL
Trigger: AAGTACTTCTTCAGATCGCCAGGATTCAAGAAGCCA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTTCGTCATCACTGATTaGCTCGTATCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYFVITD*LVSFSS
Trigger: GCTGGAGAAGGATACGAGCCAATCAGTGATGACGAA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTCATTGTCTACCATTaGAGCACTCGTGTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEFIVYH*STRVSL
Trigger: CAAGCTTACACGAGTGCTCCAATGGTAGACAATGAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAGTCTTTTCATGTCCTaGAGCATGGCAAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSLFMS*SMASSL
Trigger: AAGACTACTTGCCATGCTCCAGGACATGAAAAGACT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAAGCATTCCCTTTCACGTaGTCTGTACAACATAGTACT +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEAFPFT*SVQHST
Trigger: AGTACTATGTTGTACAGACCACGTGAAAGGGAATGC...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCCAGTTGTGCAATTATaGCAACTGGACAGACCTGAG +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYPVVQL*QLDRPE
Trigger: CTCAGGTCTGTCCAGTTGCCATAATTGCACAACTGG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTTCCCAACTTTTCTGTaGGATAACTCTTCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCFPTFL*DNSSSQ
Trigger: TTGAGAAGAAGAGTTATCCCACAGAAAAGTTGGGAA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCCTATGTCTCCCTCTTaGAGATTCTTTCCTAACAGG +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYPMSPS*RFFPNR
Trigger: CCTGTTAGGAAAGAATCTTCAAGAGGGAGACATAGG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATCTAACCACTTCTGGTaGAACCTCCTTTTTAATGAT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMASNHFW*NLLFND
Trigger: ATCATTAAAAAGGAGGTTTCACCAGAAGTGGTTAGA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTCTAACCACTTCTGGTaGAACCTCCTTTTTAATGAT +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKSNHFW*NLLFND
Trigger: ATCATTAAAAAGGAGGTTTCACCAGAAGTGGTTAGA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGACTTTGGTTGGTTTTTaGATTTCTCTGCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLTLVGF*ISLLVQ
Trigger: TTGGACCAGCAGAGAAATTCAAAAACCAACCAAAGT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTGTGAGGAAGATGAGTaGTGTCTAGAAGATATAGGA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLCEEDE*CLEDIG
Trigger: TCCTATATCTTCTAGACATCACTCATCTTCCTCACA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATCTATAGCGCTTCTTTaGTTTTCTTTCATCATGTCC +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKSIALL*FSFIMS
Trigger: GGACATGATGAAAGAAAATCAAAGAAGCGCTATAGA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTAAGAAACTTTCTCCTTaGGTTCCTGTTCTTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIKKLSP*VPVLRS
Trigger: GCTACGAAGAACAGGAACTCAAGGAGAAAGTTTCTT...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTTCTTGTTTTCATCATaGGCTCGATCAGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNFLFSS*ARSDVS
Trigger: AGAGACATCTGATCGAGCTCATGATGAAAACAAGAA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATTTGGTGAAAATACTTaGCCATCTTCAGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAFGENT*PSSDVV
Trigger: GACAACATCTGAAGATGGTCAAGTATTTTCACCAAA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACATCAGACCAGTCACTaGATGCTGTATCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEHQTSH*MLYLLF
Trigger: AAAAAGAAGATACAGCATTCAGTGACTGGTCTGATG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTATCGATCTCGTTCTTaGAGCCTGTCTCTGCTATCA +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYYRSRS*SLSLLS
Trigger: TGATAGCAGAGACAGGCTTCAAGAACGAGATCGATA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATTCACAGACTCTATTTaGGAACTCTCAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAFTDSI*ELSKVL
Trigger: CAGAACTTTTGAGAGTTCTCAAATAGAGTCTGTGAA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAAGAATATGCACTGCTaGAGGAAGACAGTACCAAAA +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNKNMHC*RKTVPK
Trigger: TTTTGGTACTGTCTTCCTTCAGCAGTGCATATTCTT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTTGGCTTCCTTCTGCTaGAATTCGCCTATAAACATA +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLLASFC*NSPINI
Trigger: TATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATGACACAAGGAAATTCTaGTTAAAGTCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNDTRKF*LKSSPA
Trigger: AGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTC...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCAGGGGAGAAGATACTaGAGATGTCTTCCTATCTTT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYQGRRY*RCLPIF
Trigger: AAAGATAGGAAGACATCTGCAGTATCTTCTCCCCTG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAAAGGAAGAATCCCTTaGTTGATCTCTGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLKGRIP*LISVVS
Trigger: AGAGACAACAGAGATCAAGCAAGGGATTCTTCCTTT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTCCATAGGCTTGCGATaGTGTGCATCTTCTATAGTC +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYSIGLR*CASSIV
Trigger: GACTATAGAAGATGCACAGCATCGCAAGCCTATGGA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATGTTTCTTCAAATCCCTaGACAGATCCCAGATCTTTA +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNVSSNP*TDPRSL
Trigger: TAAAGATCTGGGATCTGTGCAGGGATTTGAAGAAAC...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACAAGCTGCTTTCGAATTaGAGAATCCCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYKLLSN*RIPSEA
Trigger: TGCTTCAGACGGGATTCTGCAATTCGAAAGCAGCTT...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGATCACGGCTCTCTTTaGTATCTCTGCTATAATCTC +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYDHGSL*YLCYNL
Trigger: GAGATTATAGCAGAGATACCAAAGAGAGCCGTGATC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATATCATGTCCATCTCTTaGATTCCTATCTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNIMSIS*IPIFSD
Trigger: ATCCGAGAAGATAGGAATCCAAGAGATGGACATGAT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCGATCTTCAGACTGGTaGTGTCCTATAATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYRSSDW*CPIMSC
Trigger: ACAGGACATTATAGGACACCACCAGTCTGAAGATCG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCAAAAGTATTATTGGTaGTATTGGTGGGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYQKYYW*YWWGWQ
Trigger: CTGCCACCCCCACCAATACCACCAATAATACTTTTG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTGTGTGAGTCTTCATTaGCAAAAGTATTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKCVSLH*QKYYWW
Trigger: CCACCAATAATACTTTTGCCAATGAAGACTCACACA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTGGCTTCTTGAATCCTaGCGATCTGAAGAAGTACTT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNWLLES*RSEEVL
Trigger: AAGTACTTCTTCAGATCGCCAGGATTCAAGAAGCCA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCTTCTTCTTGAACTATaGCTTCTTGAATCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNLLLEL*LLESWR
Trigger: TCGCCAGGATTCAAGAAGCCATAGTTCAAGAAGAAG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCAACGCCTTACAACATaGGCCAAGATTACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIQRLTT*AKITKK
Trigger: CTTCTTAGTAATCTTGGCCCATGTTGTAAGGCGTTG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTACACACAGTTCCTGTTaGATACTGGACTGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAITHSSC*ILDCES
Trigger: ACTTTCACAGTCCAGTATCCAACAGGAACTGTGTGT...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CAA 72 bp TCACCAACAATAGTATGTACCTTAATCTTTACACAATaGGACAGTGAGGAGCAAAGTGGGAGATTCTACCAA +
Preference number: 4 (lower is better)
Translates to: SPTIVCTLIFTQ*DSEEQSGRFYQ
Trigger: TTGGTAGAATCTCCCACTTTGCTCCTCACTGTCCAATTGTGTAAAGATTAAGGTACATACTATTGTTGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CAA 72 bp CACTTTACAAATAAAATTGAGGCTCACAGGAGTTATTaGCTTAAGGTCACAGAACCAACCAAACAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HFTNKIEAHRSY*LKVTEPTKQGR
Trigger: TCTGCCTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTATTTGTAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTTCTTGTTTTCATCATaGGCTCGATCAGATGTCTCT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYFLFSS*ARSDVS
Trigger: AGAGACATCTGATCGAGCTCATGATGAAAACAAGAA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTTTGGTGAAAATACTTaGCCATCTTCAGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLFGENT*PSSDVV
Trigger: GACAACATCTGAAGATGGTCAAGTATTTTCACCAAA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTTTGGTGAAAATACTTaGCCATCTTCAGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNFGENT*PSSDVV
Trigger: GACAACATCTGAAGATGGTCAAGTATTTTCACCAAA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCATCAGACCAGTCACTaGATGCTGTATCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIHQTSH*MLYLLF
Trigger: AAAAAGAAGATACAGCATTCAGTGACTGGTCTGATG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTCTTCTATAGTCACGTaGGGCGTCTCTACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYSSIVT*GVSTFS
Trigger: AGAAAAAGTAGAGACGCCTCACGTGACTATAGAAGA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTTCACAGACTCTATTTaGGAACTCTCAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLFTDSI*ELSKVL
Trigger: CAGAACTTTTGAGAGTTCTCAAATAGAGTCTGTGAA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATCCAAAAATACCATATTaGACTTCGGTCTTAAGACAC +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNPKIPY*TSVLRH
Trigger: GTGTCTTAAGACCGAAGTTCAATATGGTATTTTTGG...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTTGGCTTCCTTCTGCTaGAATTCGCCTATAAACATA +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAILASFC*NSPINI
Trigger: TATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACGACACAAGGAAATTCTaGTTAAAGTCTTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNDTRKF*LKSSPA
Trigger: AGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTC...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTCTGAATGCTGTGACTaGGTGAACAAAGGAATAGTT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYSECCD*VNKGIV
Trigger: AACTATTCCTTTGTTCACTCAGTCACAGCATTCAGA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTGGTATGATTATTCCTaGCTTACAGATGATGACACT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNWYDYS*LTDDDT
Trigger: AGTGTCATCATCTGTAAGTCAGGAATAATCATACCA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGTGACCTTCTATAATTaGTGCTATAACCTTTACCAC +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNVTFYN*CYNLYH
Trigger: GTGGTAAAGGTTATAGCAGCAATTATAGAAGGTCAC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGGTGACCTTCTATAATTaGTGCTATAACCTTTACCAC +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLVTFYN*CYNLYH
Trigger: GTGGTAAAGGTTATAGCAGCAATTATAGAAGGTCAC...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACGTTTTTGAATTTCTCTaGTGGTCCAACAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYVFEFL*WSNRGE
Trigger: TTCTCCCCTGTTGGACCAGCAGAGAAATTCAAAAAC...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCTCTTTGGTATCTCTaGTATAATCTCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISLWYL*YNLSSP
Trigger: GGGAGATGAGAGATTATAGCAGAGATACCAAAGAGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATACCATTCTTACCATTaGACATTTCAACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAYHSYH*TFQPIP
Trigger: AGGAATTGGTTGAAATGTGCAATGGTAAGAATGGTA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAATGGTGAGGATAGCTaGCAAAATAATCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLNGEDS*QNNQKA
Trigger: AGCCTTTTGATTATTTTGGCAGCTATCCTCACCATT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGGGAGATTCTACCAATaGCACTTACAGAACAGATTT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYGRFYQ*HLQNRF
Trigger: AAATCTGTTCTGTAAGTGGCATTGGTAGAATCTCCC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGGGAATAACTGAAAATTaGTGCAGTGAGGTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKGITEN*CSEVKN
Trigger: ATTTTTGACCTCACTGCAGCAATTTTCAGTTATTCC...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTGGACTAGGAGTACGTaGTCCTTTCTTTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYWTRST*SFLFTL
Trigger: CAAAGTAAAAAGAAAGGACCACGTACTCCTAGTCCA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTGGACTAGGAGTACGTaGTCCTTTCTTTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIWTRST*SFLFTL
Trigger: CAAAGTAAAAAGAAAGGACCACGTACTCCTAGTCCA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACGATCACGGCTCTCTTTaGTATCTCTGCTATAATCTC +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYDHGSL*YLCYNL
Trigger: GAGATTATAGCAGAGATACCAAAGAGAGCCGTGATC...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTTCGAGACTCATTTCTaGACTCATTCCTTATTTCCG +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYFETHF*THSLFP
Trigger: CGGAAATAAGGAATGAGTCCAGAAATGAGTCTCGAA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACATCATGTCCATCTCTTaGATTCCTATCTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYIMSIS*IPIFSD
Trigger: ATCCGAGAAGATAGGAATCCAAGAGATGGACATGAT...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACACTCTCTTTCCTTTCTaGTTTACGATCCTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNTLFPF*FTILLF
Trigger: AAAGAGGAGGATCGTAAACCAGAAAGGAAAGAGAGT...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACAGTCTTTTCATGTCCTaGAGCATGGCAAGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYSLFMS*SMASSL
Trigger: AAGACTACTTGCCATGCTCCAGGACATGAAAAGACT...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAGCAAGAACTAAGTCTTaGGTCATTTTTCGGTTAATA +
Preference number: 4 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKARTKS*VIFRLI
Trigger: TATTAACCGAAAAATGACCCAAGACTTAGTTCTTGC...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282007.7
3UTR CAA 72 bp CACTCTTTTAGCATGGCTGATAAATCTTTTCTGCCTTaGTCACTAATGCTTGTCAAACCAAAGAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: HSFSMADKSFLP*SLMLVKPKNFA
Trigger: TGCAAAGTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCATGCTAAAAGAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
3UTR CAA 72 bp GGAACTGTTCTAAGTGTTTTGCCTGTAATAACTCATTaGCTCCTAATTACCATAGGAAGTTGGTGGTATGAT +
Preference number: 4 (lower is better)
Translates to: GTVLSVLPVITH*LLITIGSWWYD
Trigger: ATCATACCACCAACTTCCTATGGTAATTAGGAGCAAATGAGTTATTACAGGCAAAACACTTAGAACAGTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR TCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGAAGGAGAATGTCTTTaGATAGATGATCCTGATTGT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYEGECL*IDDPDC
Trigger: ACAATCAGGATCATCTATTCAAAGACATTCTCCTTC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCTATAGCGCTTCTTTaGTTTTCTTTCATCATGTCC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISIALL*FSFIMS
Trigger: GGACATGATGAAAGAAAATCAAAGAAGCGCTATAGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR TCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCCAAAAATACCATATTaGACTTCGGTCTTAAGACAC +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIPKIPY*TSVLRH
Trigger: GTGTCTTAAGACCGAAGTTCAATATGGTATTTTTGG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTACCATTCTTACCATTaGACATTTCAACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNYHSYH*TFQPIP
Trigger: AGGAATTGGTTGAAATGTGCAATGGTAAGAATGGTA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTACCATTCTTACCATTaGACATTTCAACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNYHSYH*TFQPIP
Trigger: AGGAATTGGTTGAAATGTGCAATGGTAAGAATGGTA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR GCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTTGCAGACATACTCTTaGCCTTTATCTATCTACACA +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNLQTYS*PLSIYT
Trigger: TGTGTAGATAGATAAAGGGCAAGAGTATGTCTGCAA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTTGCAGACATACTCTTaGCCTTTATCTATCTACACA +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAILQTYS*PLSIYT
Trigger: TGTGTAGATAGATAAAGGGCAAGAGTATGTCTGCAA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTCATTTATTTTGGATTaGAGACATACTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNSFILD*RHTLAL
Trigger: AAGGGCAAGAGTATGTCTGCAATCCAAAATAAATGA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATCATTTATTTTGGATTaGAGACATACTCTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDESFILD*RHTLAL
Trigger: AAGGGCAAGAGTATGTCTGCAATCCAAAATAAATGA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR GCA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACAATGGTGAGGATAGCTaGCAAAATAATCAAAAGGCT +
Preference number: 4 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYNGEDS*QNNQKA
Trigger: AGCCTTTTGATTATTTTGGCAGCTATCCTCACCATT...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTGTGTGAGTCTTCATTaGCAAAAGTATTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYCVSLH*QKYYWW
Trigger: CCACCAATAATACTTTTGCCAATGAAGACTCACACA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACGATTGTCTGCATCTTTaGGTTTTTCTAAAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNDCLHL*VFLKVS
Trigger: AGAGACTTTTAGAAAAACCCAAAGATGCAGACAATC...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTGTTCCTGTTGGATACTaGACTGTGAAAGTTTATTAT +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIVPVGY*TVKVYY
Trigger: ATAATAAACTTTCACAGTCCAGTATCCAACAGGAAC...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCGTAAAATCTTAAGTTaGCCAAAACTAGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIRKILS*PKLVSL
Trigger: TAGAGACACTAGTTTTGGCCAACTTAAGATTTTACG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CCA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTTCACTCTTTTAGCATaGCTGATAAATCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYFTLLA*LINLFC
Trigger: GCAGAAAAGATTTATCAGCCATGCTAAAAGAGTGAA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CCA 90 bp CGCCGCCGCTCCGAGGAGCGGGGGAGGCGACTCTGTCCCCGCGCCTaGACCCAGGAGGACGACGACGAGGAGAAAGCGATGCGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: RRRSEERGRRLCPRA*TQEDDDEEKAMRAR
Trigger: CCGCGCGCGCATCGCTTTCTCCTCGTCGTCGTCCTCCTGGGTCCAGGCGCGGGGACAGAGTCGCCTCCCCCGCTCCTCGGAGCGGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS CCA 90 bp GCGGCTCCCGGGAACCGGCTCTTGGCTAGCGAGGAGCCCCCGGGATaGCTGAGAAGCAGAACCAACCCGCCCGCCGCCTCTCCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: AAPGNRLLASEEPPG*LRSRTNPPAASPGS
Trigger: TGACCCTGGAGAGGCGGCGGGCGGGTTGGTTCTGCTTCTCAGCCATCCCGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCCGGGAGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS TCA 90 bp CTCCCGGGAACCGGCTCTTGGCTAGCGAGGAGCCCCCGGGATGGCTaGGAAGCAGAACCAACCCGCCCGCCGCCTCTCCAGGGTCAAGCG +
Preference number: 5 (lower is better)
Translates to: LPGTGSWLARSPRDG*EAEPTRPPPLQGQA
Trigger: CGCTTGACCCTGGAGAGGCGGCGGGCGGGTTGGTTCTGCTTCTCAGCCATCCCGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS-3UTR CAA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGCCCGGGAACCGGCTCTaGGCTAGCGAGGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLPGNRL*ASEEPP
Trigger: CGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCCGGG...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACCCGGGAACCGGCTCTaGGCTAGCGAGGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPPGNRL*ASEEPP
Trigger: CGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCCGGG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCTACGGTTACTCCGATaGCTCCCGAGGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHLRLLR*LPRLLL
Trigger: GAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTAG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS GCA 90 bp AGGAGAAGGGGTACTACCAGGAGTCGTGGCGGTGGCAGTATGCTCTaGTTCTGTCACCTCTGTACGGTCAGGGACATCCTCATCAGACCA +
Preference number: 5 (lower is better)
Translates to: RRRGTTRSRGGGSML*FCHLCTVRDILIRP
Trigger: TGGTCTGATGAGGATGTCCCTGACCGTACAGAGGTGACAGAAGCAGAGCATACTGCCACCGCCACGACTCCTGGTAGTACCCCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 90 bp CGATGGGCTGAATCATTGGATGGGGAGCGAAGACGACCAGACGTATaGCTACGGTTACTCCGATTGCTCCCGAGGCTGCTGCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: RWAESLDGERRRPDV*LRLLRLLPRLLLLF
Trigger: AAAGAGGAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTAGTCATACGTCTGGTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATCGATGGGCTGAATCATaGGATGGGGAGCGAAGACGA +
Preference number: 5 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHRWAES*DGERRR
Trigger: TCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCG...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS CCA 90 bp GAGTATCTCGACCTTCACGGTCCCTGTAGTCATGGGCATCACGAGTaGACCGAGAATCTCTGGGATCACGGCTCTCTTTGGTATCTCTGC +
Preference number: 5 (lower is better)
Translates to: EYLDLHGPCSHGHHE*TENLWDHGSLWYLC
Trigger: GCAGAGATACCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCACTCGTGATGCCCATGACTACAGGGACCGTGAAGGTCGAGATACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp GAAGAGAAGATAGAGGAGAAGGGGTACTACCAGGAGTCGTGGCGGTaGCAGTATGCTCTGCTTCTGTCACCTCTGTACGGTCAGGGACAT +
Preference number: 5 (lower is better)
Translates to: EEKIEEKGYYQESWR*QYALLLSPLYGQGH
Trigger: ATGTCCCTGACCGTACAGAGGTGACAGAAGCAGAGCATACTGCCACCGCCACGACTCCTGGTAGTACCCCTTCTCCTCTATCTTCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 90 bp CTGTTGCGTGGCCAATCTTTATCAGCATCTCGGTCCCATTCTCTCTaGCTCGTATCTCTCCTCTCTCTCTCGCGCTCTCTGTCGTGTTCA +
Preference number: 5 (lower is better)
Translates to: LLRGQSLSASRSHSL*LVSLLSLSRSLSCS
Trigger: TGAACACGACAGAGAGCGCGAGAGAGAGAGGAGAGATACGAGGCAGAGAGAATGGGACCGAGATGCTGATAAAGATTGGCCACGCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp GGGCATCACGAGTGGACCGAGAATCTCTGGGATCACGGCTCTCTTTaGTATCTCTGCTATAATCTCTCATCTCCCTTGAGTCCCGCATGT +
Preference number: 5 (lower is better)
Translates to: GHHEWTENLWDHGSL*YLCYNLSSPLSPAC
Trigger: ACATGCGGGACTCAAGGGAGATGAGAGATTATAGCAGAGATACCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCACTCGTGATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATTCTCTTTCGACCACTTaGGTCATCTCCACTTCGATG +
Preference number: 5 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHSLSTT*VISTSM
Trigger: CATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAGA...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS TCA 90 bp CAGTACTCTCTTTCGACCACTTTGGTCATCTCCACTTCGATGGGCTaGATCATTGGATGGGGAGCGAAGACGACCAGACGTATGACTACG +
Preference number: 5 (lower is better)
Translates to: QYSLSTTLVISTSMG*IIGWGAKTTRRMTT
Trigger: CGTAGTCATACGTCTGGTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAGAGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 90 bp GTGAAGGGCCATGTACGAATCTACATGTGTTTCCATAGAGGCAGTTaGCAGTCTTCAGCCAGTTACGGCACTGTGTCTCTGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: VKGHVRIYMCFHRGS*QSSASYGTVSLLYC
Trigger: GCAGTACAGCAGAGACACAGTGCCGTAACTGGCTGAAGACTGGCAACTGCCTCTATGGAAACACATGTAGATTCGTACATGGCCCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS GCA 90 bp GAGTGGACCGAGAATCTCTGGGATCACGGCTCTCTTTGGTATCTCTaGTATAATCTCTCATCTCCCTTGAGTCCCGCATGTCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EWTENLWDHGSLWYL*YNLSSPLSPACLWS
Trigger: ACTCCAGAGACATGCGGGACTCAAGGGAGATGAGAGATTATAGCAGAGATACCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 90 bp CCCGAGGCTGCTGCTCCTCTTTTGATCCATAGGCTTGCGATGCTGTaGATCTTCTATAGTCACGTGAGGCGTCTCTACTTTTTCTACTCG +
Preference number: 5 (lower is better)
Translates to: PEAAAPLLIHRLAML*IFYSHVRRLYFFYS
Trigger: CGAGTAGAAAAAGTAGAGACGCCTCACGTGACTATAGAAGATGCACAGCATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAGCCTCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp CACGGTCCCTGTAGTCATGGGCATCACGAGTGGACCGAGAATCTCTaGGATCACGGCTCTCTTTGGTATCTCTGCTATAATCTCTCATCT +
Preference number: 5 (lower is better)
Translates to: HGPCSHGHHEWTENL*DHGSLWYLCYNLSS
Trigger: AGATGAGAGATTATAGCAGAGATACCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCACTCGTGATGCCCATGACTACAGGGACCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp TCTTTCGACCACTTTGGTCATCTCCACTTCGATGGGCTGAATCATTaGATGGGGAGCGAAGACGACCAGACGTATGACTACGGTTACTCC +
Preference number: 5 (lower is better)
Translates to: SFDHFGHLHFDGLNH*MGSEDDQTYDYGYS
Trigger: GGAGTAACCGTAGTCATACGTCTGGTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp TCTCTCTCGTTCTCGTTCTCGCAATCTATCTCGATCCCTGTTGCGTaGCCAATCTTTATCAGCATCTCGGTCCCATTCTCTCTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: SLSFSFSQSISIPVA*PIFISISVPFSLPR
Trigger: ACGAGGCAGAGAGAATGGGACCGAGATGCTGATAAAGATTGGCCACGCAACAGGGATCGAGATAGATTGCGAGAACGAGAACGAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATATATCGATCTCGTTCTaGAAGCCTGTCTCTGCTATC +
Preference number: 5 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHISISF*KPVSAI
Trigger: GATAGCAGAGACAGGCTTCAAGAACGAGATCGATAT...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp GGCTCCAGCAATCCTGCTGCCTCAACCTCCCTGAGTAGCTGTGACTACAGACATGCTCACAGGAGTTATTaGCTTAAGGTCACAGAACCA +
Preference number: 5 (lower is better)
Translates to: GSSNPAASTSLSSCDYRHAHRSY*LKVTEP
Trigger: TGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGC...ATGTCTGTAGTCACAGCTACTCAGGGAGGTTGAGGCAGCAGGATTGCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS CCA 90 bp TCTCTATCTCTTGAGCCACTGTGCAGTACTCTCTTTCGACCACTTTaGTCATCTCCACTTCGATGGGCTGAATCATTGGATGGGGAGCGA +
Preference number: 5 (lower is better)
Translates to: SLSLEPLCSTLFRPL*SSPLRWAESLDGER
Trigger: TCGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAGAGTACTGCACAGTGGCTCAAGAGATAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGTCTCTTTCGACCACTTaGGTCATCTCCACTTCGATG +
Preference number: 5 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLSLSTT*VISTSM
Trigger: CATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAGA...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS TCA 90 bp GCCCCTAGTATCTTCCCTCCTTTCATGGCGTCGATCATGAGACTGTaGAGTTCGTTCATGATCATGTCTCCCTTTCTCTCGCATTGGAGA +
Preference number: 5 (lower is better)
Translates to: APSIFPPFMASIMRL*SSFMIMSPFLSHWR
Trigger: TCTCCAATGCGAGAGAAAGGGAGACATGATCATGAACGAACTTCACAGTCTCATGATCGACGCCATGAAAGGAGGGAAGATACTAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 90 bp CTCTCTCTCTCGCGCTCTCTGTCGTGTTCATATCGATCTCGTTCTTaGAGCCTGTCTCTGCTATCAAATGACCCAGATCTTGAATGGACC +
Preference number: 5 (lower is better)
Translates to: LSLSRSLSCSYRSRS*SLSLLSNDPDLEWT
Trigger: GGTCCATTCAAGATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAGAACGAGATCGATATGAACACGACAGAGAGCGCGAGAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAATCTCTCATCTCCCTaGAGTCCCGCATGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLNLSSP*SPACLW
Trigger: CCAGAGACATGCGGGACTCAAGGGAGATGAGAGATT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAGCTGCTGCTCCTCTTTaGATCCATAGGCTTGCGATG +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPAAAPL*IHRLAM
Trigger: CATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAGC...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CCA 90 bp GATGACTCCTCTGTATTTCGTTTCTGGGGCTCAGTGTCCACGTCTTaGCGCTTGTTCTTCATTCTTTCTCTAAGATCCCCTGTAGGTCTT +
Preference number: 5 (lower is better)
Translates to: DDSSVFRFWGSVSTS*RLFFILSLRSPVGL
Trigger: AAGACCTACAGGGGATCTTAGAGAAAGAATGAAGAACAAGCGCCAAGACGTGGACACTGAGCCCCAGAAACGAAATACAGAGGAGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACTCAGTGTCCACGTCTaGGCGCTTGTTCTTCATTCT +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPLSVHV*ALVLHS
Trigger: AGAATGAAGAACAAGCGCCAAGACGTGGACACTGAG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTGGAGAGCGATGTCTaGGAGGACTCTGCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLESDV*EDSAFS
Trigger: AGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACTACGGTTACTCCGATaGCTCCCGAGGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDELRLLR*LPRLLL
Trigger: GAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTAG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTGCTCTGTCACCTAGGTaGGAGTGTGGTGGCTCAATC +
Preference number: 5 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCALSPR*ECGGSI
Trigger: GATTGAGCCACCACACTCCAACCTAGGTGACAGAGC...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS GCA 90 bp GCTCTCTGTCGTGTTCATATCGATCTCGTTCTTGAAGCCTGTCTCTaGTATCAAATGACCCAGATCTTGAATGGACCTGTCGATCTGACT +
Preference number: 5 (lower is better)
Translates to: ALCRVHIDLVLEACL*YQMTQILNGPVDLT
Trigger: AGTCAGATCGACAGGTCCATTCAAGATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAGAACGAGATCGATATGAACACGACAGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp GATTCTTTCCTAACAGGTGAGGATGACTCCTCTGTATTTCGTTTCTaGGGCTCAGTGTCCACGTCTTGGCGCTTGTTCTTCATTCTTTCT +
Preference number: 5 (lower is better)
Translates to: DSFLTGEDDSSVFRF*GSVSTSWRLFFILS
Trigger: AGAAAGAATGAAGAACAAGCGCCAAGACGTGGACACTGAGCCCCAGAAACGAAATACAGAGGAGTCATCCTCACCTGTTAGGAAAGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAAGACGACTTCGGGCTaGATTTTCGCTTCGGAGATT +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLKTTSG*IFASEI
Trigger: AATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCTT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGGTCGAATTGGTGAGCTaGGTCTTTGATCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLVELVS*VFDLSL
Trigger: GAGAGAGAGATCAAAGACCAAGCTCACCAATTCGAC...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCTACGGTTACTCCGATaGCTCCCGAGGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNLRLLR*LPRLLL
Trigger: GAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTAG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACGATGGGCTGAATCATaGGATGGGGAGCGAAGACGA +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMARWAES*DGERRR
Trigger: TCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTCTCTTTCGACCACTTaGGTCATCTCCACTTCGATG +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLSLSTT*VISTSM
Trigger: CATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAGA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTGTGCATCATCTAACTaGGACTCGTCATCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLCASSN*DSSSPS
Trigger: GGAAGGAGATGACGAGTCCAAGTTAGATGATGCACA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242848.8
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAGCACTCGTGTAAGCTaGTTTTATGGTGCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLSTRVS*FYGALL
Trigger: GAGAAGGGCACCATAAAACAAGCTTACACGAGTGCT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS TCA 90 bp CCATCTCGAGGTTCTCTGTCATCTCTGTGGTCTCTAGAAGAGCTCTaGTCCTGTTCATATTCTCGTTCTTCTCTTGAGTCCTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PSRGSLSSLWSLEEL*SCSYSRSSLESFSL
Trigger: CAGAGAAAAGGACTCAAGAGAAGAACGAGAATATGAACAGGATCAGAGCTCTTCTAGAGACCACAGAGATGACAGAGAACCTCGAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 90 bp TCTTTTCTGCATCACCTGCCAGAATTTCATCTAGTTCGTCATCACTaGTTGGCTCGTATCCTTCTCCAGCACCAGAGCCTAATGAATGTG +
Preference number: 5 (lower is better)
Translates to: SFLHHLPEFHLVRHH*LARILLQHQSLMNV
Trigger: CACATTCATTAGGCTCTGGTGCTGGAGAAGGATACGAGCCAATCAGTGATGACGAACTAGATGAAATTCTGGCAGGTGATGCAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp ACTTTCTTCTCTCAAATGGTTTCGGCCATAACTCCGGGATTCTTCTaGATATGTATCCTCCTTTCGATGAGTATCTCGACCTTCACGGTC +
Preference number: 5 (lower is better)
Translates to: TFFSQMVSAITPGFF*ICILLSMSISTFTV
Trigger: GACCGTGAAGGTCGAGATACTCATCGAAAGGAGGATACATATCCAGAAGAATCCCGGAGTTATGGCCGAAACCATTTGAGAGAAGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 90 bp GCACATTTCAACCAATTCCTCTTTAGTTGTTATAGGGGGAGTCCGTaGGCCTCTTTTCTTCTTACTTTGCTGGGCTGCTTCTTCATCAGA +
Preference number: 5 (lower is better)
Translates to: AHFNQFLFSCYRGSP*ASFLLTLLGCFFIR
Trigger: TCTGATGAAGAAGCAGCCCAGCAAAGTAAGAAGAAAAGAGGCCCACGGACTCCCCCTATAACAACTAAAGAGGAATTGGTTGAAATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTCTCAGTGTCCACGTCTaGGCGCTTGTTCTTCATTCT +
Preference number: 5 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCLSVHV*ALVLHS
Trigger: AGAATGAAGAACAAGCGCCAAGACGTGGACACTGAG...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATCCCTTTCTCTCGCATaGGAGAGCGATGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKSLSLA*ESDVLE
Trigger: CTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGAATCTCTCATCTCCCTaGAGTCCCGCATGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRNLSSP*SPACLW
Trigger: CCAGAGACATGCGGGACTCAAGGGAGATGAGAGATT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCACAAAGGAAGAATCCCTaGCTTGATCTCTGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPQRKNP*LDLCCL
Trigger: GAGACAACAGAGATCAAGCAAGGGATTCTTCCTTTG...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATTCCCTGATGTCGAATaGGTGAGCTTGGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPFPDVE*VSLVFD
Trigger: ATCAAAGACCAAGCTCACCAATTCGACATCAGGGAA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGCATCATGTCCATCTCTaGGATTCCTATCTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLHHVHL*DSYLLG
Trigger: TCCGAGAAGATAGGAATCCAAGAGATGGACATGATG...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTGAGGTCGTACAACTaGGCTCAAGAGTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLRSYN*AQESVF
Trigger: AAACACAGACTCTTGAGCCAAGTTGTACGACCTCAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGGCTGCTGCTCCTCTTTaGATCCATAGGCTTGCGATG +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRAAAPL*IHRLAM
Trigger: CATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAGC...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAAGTAATGCAGCCATATaGAGAGCCCCCAATTCATGT +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSNAAI*RAPNSC
Trigger: ACATGAATTGGGGGCTCTCAATATGGCTGCATTACT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CCACGCCAGCTAGACCAGCATTCCCTTTCACGTGGTCTGTACAACATAGTACTGGTAAGACCATTTCCTTaGGCAGGTATCTTGTATAAA +
Preference number: 5 (lower is better)
Translates to: PRQLDQHSLSRGLYNIVLVRPFP*AGILYK
Trigger: TTTATACAAGATACCTGCCAAAGGAAATGGTCTTAC...CAGTACTATGTTGTACAGACCACGTGAAAGGGAATGCTGGTCTAGCTGGCGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS GCA 90 bp TTGTTTTATGGTGCCCTTCTCATTTTTAACAAGCTGCTTTCGAATTaGAGAATCCCGTCTGAAGCACAACGCCTTACAACATGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LFYGALLIFNKLLSN*RIPSEAQRLTTWAK
Trigger: CTTGGCCCATGTTGTAAGGCGTTGTGCTTCAGACGGGATTCTGCAATTCGAAAGCAGCTTGTTAAAAATGAGAAGGGCACCATAAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATTGGAGAGCGATGTCTaGGAGGACTCTGCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKLESDV*EDSAFS
Trigger: AGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAATCTCTCATCTCCCTaGAGTCCCGCATGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLNLSSP*SPACLW
Trigger: CCAGAGACATGCGGGACTCAAGGGAGATGAGAGATT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCGGTCATCTCGTCCTTaGTCTTTGTCTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRRSSRP*SLSSQS
Trigger: GGATTGGGAAGACAAAGACAAAGGACGAGATGACCG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACCTGTGCACGCATTCTaGAGCTTTCCAGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKPVHAF*SFPGFL
Trigger: CAGAAATCCTGGAAAGCTCAAGAATGCGTGCACAGG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGGCTGCTGCTCCTCTTTaGATCCATAGGCTTGCGATG +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLAAAPL*IHRLAM
Trigger: CATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAGC...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS GCA 90 bp TTAGTTGTTATAGGGGGAGTCCGTGGGCCTCTTTTCTTCTTACTTTaGTGGGCTGCTTCTTCATCAGAAATATCAGAATCACCTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LVVIGGVRGPLFFLL*WAASSSEISESPLD
Trigger: ATCCAAAGGTGATTCTGATATTTCTGATGAAGAAGCAGCCCAGCAAAGTAAGAAGAAAAGAGGCCCACGGACTCCCCCTATAACAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 90 bp CTTTATCCATTCTCTCTTTATCCAAGGCTAGAGAGTCTCGGGAAGTaGTTTCTAGATCCCTTTCATGTTCACCTTCCAGTTTTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LYPFSLYPRLESLGK*FLDPFHVHLPVLLH
Trigger: GTGAAGCAAAACTGGAAGGTGAACATGAAAGGGATCTAGAAAGCACTTCCCGAGACTCTCTAGCCTTGGATAAAGAGAGAATGGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGAAGACGACTTCGGGCTaGATTTTCGCTTCGGAGATT +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRKTTSG*IFASEI
Trigger: AATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCTT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTACTTTGGTTGGTTTTaGAATTTCTCTGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLYFGWF*NFSAGP
Trigger: TGGACCAGCAGAGAAATTCAAAAACCAACCAAAGTA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTTGGAGAGCGATGTCTaGGAGGACTCTGCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLLESDV*EDSAFS
Trigger: AGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCCCTTTCTCTCGCATaGGAGAGCGATGTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISLSLA*ESDVLE
Trigger: CTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTTTTCTCTGTCTCGTTaGCCCCTAGTATCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRFSLSR*PLVSSL
Trigger: GAGGGAAGATACTAGGGGCAAACGAGACAGAGAAAA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGGTCGAATTGGTGAGCTaGGTCTTTGATCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRVELVS*VFDLSL
Trigger: GAGAGAGAGATCAAAGACCAAGCTCACCAATTCGAC...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGCGGTCATCTCGTCCTTaGTCTTTGTCTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLRSSRP*SLSSQS
Trigger: GGATTGGGAAGACAAAGACAAAGGACGAGATGACCG...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATCGGTCATCTCGTCCTTaGTCTTTGTCTTCCCAATCC +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNRSSRP*SLSSQS
Trigger: GGATTGGGAAGACAAAGACAAAGGACGAGATGACCG...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCGATGGGCTGAATCATaGGATGGGGAGCGAAGACGA +
Preference number: 5 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYRWAES*DGERRR
Trigger: TCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACAAATGACCCAGATCTaGAATGGACCTGTCGATCTG +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKQMTQI*NGPVDL
Trigger: CAGATCGACAGGTCCATTCAAGATCTGGGTCATTTG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCACTATCTCGATCCCTGTaGCGTGGCCAATCTTTATCA +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMALSRSL*RGQSLS
Trigger: TGATAAAGATTGGCCACGCAACAGGGATCGAGATAG...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCTATCTCGATCCCTGTaGCGTGGCCAATCTTTATCA +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRLSRSL*RGQSLS
Trigger: TGATAAAGATTGGCCACGCAACAGGGATCGAGATAG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAATCGAAGTAATTCATaGTCTACCATTGGAGCACTC +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLNRSNS*STIGAL
Trigger: GAGTGCTCCAATGGTAGACAATGAATTACTTCGATT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAAATCGAAGTAATTCATaGTCTACCATTGGAGCACTC +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPNRSNS*STIGAL
Trigger: GAGTGCTCCAATGGTAGACAATGAATTACTTCGATT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCAATTGCAGACATACTCTaGCCCTTTATCTATCTACAC +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPIADIL*PFIYLH
Trigger: GTGTAGATAGATAAAGGGCAAGAGTATGTCTGCAAT...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTGTGCATCATCTAACTaGGACTCGTCATCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKCASSN*DSSSPA
Trigger: AGCAGGAGATGACGAGTCCAAGTTAGATGATGCACA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACCCTACACACCTGCATTaGGGTAGATGTCTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNPTHLH*GRCLGE
Trigger: TTCCCCTAGACATCTACCCAAATGCAGGTGTGTAGG...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS TCA 90 bp ACTTCGGTCTTAAGACACACACAGTTCCTGTTGGATACTGGACTGTaGAAGTTTATTATCTTCAGTCTTTTCATGTCCTGGAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: TSVLRHTQFLLDTGL*KFIIFSLFMSWSMA
Trigger: TGCCATGCTCCAGGACATGAAAAGACTGAAGATAATAAACTTTCACAGTCCAGTATCCAACAGGAACTGTGTGTGTCTTAAGACCGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS GCA 90 bp CTCTTTCAGGATAGCTACTTCGAGTTTCCCAGCTGTCATGATAGTTaGTATTACTACTGTGACTATCAATTTGAGAACCTCTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LFQDSYFEFPSCHDS*YYYCDYQFENLLSL
Trigger: GAGGCTCAAGAGGTTCTCAAATTGATAGTCACAGTAGTAATAGCAACTATCATGACAGCTGGGAAACTCGAAGTAGCTATCCTGAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAAGTCTTCCTATCTTTCTaGCTAGCTGAAGACGACTTC +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKVFLSF*LAEDDF
Trigger: GAAGTCGTCTTCAGCTAGCAAGAAAGATAGGAAGAC...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTTTCTCTGTCTCGTTaGCCCCTAGTATCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEFSLSR*PLVSSL
Trigger: GAGGGAAGATACTAGGGGCAAACGAGACAGAGAAAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGCAATTTGAGAACCTCTaGAGCCTCGACTTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKQFENL*SLDFPF
Trigger: AAAAGGGAAGTCGAGGCTCAAGAGGTTCTCAAATTG...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAACAAAGGAAGAATCCCTaGCTTGATCTCTGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKQRKNP*LDLCCL
Trigger: GAGACAACAGAGATCAAGCAAGGGATTCTTCCTTTG...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTTCCCTGATGTCGAATaGGTGAGCTTGGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKFPDVE*VSLVFD
Trigger: ATCAAAGACCAAGCTCACCAATTCGACATCAGGGAA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTCTCGTCCTTTGTCTTaGTCTTCCCAATCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNSRPLS*SSQSLW
Trigger: CCAAAGGGATTGGGAAGACAAAGACAAAGGACGAGA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTTGAGGTCGTACAACTaGGCTCAAGAGTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRLRSYN*AQESVF
Trigger: AAACACAGACTCTTGAGCCAAGTTGTACGACCTCAA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGAAGAGAACGAGATTCTaGAGGTCGTACAACTTGGCT +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRKRTRF*RSYNLA
Trigger: AGCCAAGTTGTACGACCTCAAGAATCTCGTTCTCTT...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAAAGAGAACGAGATTCTaGAGGTCGTACAACTTGGCT +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAKRTRF*RSYNLA
Trigger: AGCCAAGTTGTACGACCTCAAGAATCTCGTTCTCTT...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATGTTCTTCGTAGCGCCTaGAACTCTCTTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNVLRSA*NSLSFL
Trigger: CAGAAAGGAAAGAGAGTTCAAGGCGCTACGAAGAAC...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGTTCTTCGTAGCGCCTaGAACTCTCTTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNVLRSA*NSLSFL
Trigger: CAGAAAGGAAAGAGAGTTCAAGGCGCTACGAAGAAC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGGTTCTTCGTAGCGCCTaGAACTCTCTTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLVLRSA*NSLSFL
Trigger: CAGAAAGGAAAGAGAGTTCAAGGCGCTACGAAGAAC...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACCCTGTGCACGCATTCTaGAGCTTTCCAGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYPVHAF*SFPGFL
Trigger: CAGAAATCCTGGAAAGCTCAAGAATGCGTGCACAGG...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCCTGTGCACGCATTCTaGAGCTTTCCAGGATTTCTG +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNPVHAF*SFPGFL
Trigger: CAGAAATCCTGGAAAGCTCAAGAATGCGTGCACAGG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGTTGGCAAAAGTATTATaGGTGGTATTGGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRLAKVL*VVLVGV
Trigger: CACCCCCACCAATACCACCAATAATACTTTTGCCAA...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGCAAATGACCCAGATCTaGAATGGACCTGTCGATCTG +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLQMTQI*NGPVDL
Trigger: CAGATCGACAGGTCCATTCAAGATCTGGGTCATTTG...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACAAATGACCCAGATCTaGAATGGACCTGTCGATCTG +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEQMTQI*NGPVDL
Trigger: CAGATCGACAGGTCCATTCAAGATCTGGGTCATTTG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAATATCGATCTCGTTCTaGAAGCCTGTCTCTGCTATC +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAISISF*KPVSAI
Trigger: GATAGCAGAGACAGGCTTCAAGAACGAGATCGATAT...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGTTCACCTTCCAGTTTaGCTTCACAGCGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNVHLPV*LHSVSQ
Trigger: CTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAAC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTCTCTCGGATTTATTaGTTTCTTCAAATCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLFSRIY*FLQIPA
Trigger: TGCAGGGATTTGAAGAAACAAATAAATCCGAGAGAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGAGATTGTCTGCATCTTaGGGTTTTTCTAAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLRLSAS*GFSKSL
Trigger: GAGACTTTTAGAAAAACCCAAAGATGCAGACAATCT...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTTGGCTTCCTTCTGCTGAAATTCGCCTATAAACATACCACGCCAGCTAGACCATCATGTTCAAAGAGATaGTCTGCATCTTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: FGFLLLKFAYKHTTPARPSCSKR*SASLGF
Trigger: AAAACCCAAAGATGCAGACAATCTCTTTGAACATGA...TGGTCTAGCTGGCGTGGTATGTTTATAGGCGAATTTCAGCAGAAGGAAGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAGCACTCGTGTAAGCTaGTTTTATGGTGCCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLSTRVS*FYGALL
Trigger: GAGAAGGGCACCATAAAACAAGCTTACACGAGTGCT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGCAGCTGGAATCCAGTaGTGCAATTATGGCAACTGG +
Preference number: 5 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYAAGIQ*CNYGNW
Trigger: CCAGTTGCCATAATTGCACAACTGGATTCCAGCTGC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTGCAGCTGGAATCCAGTaGTGCAATTATGGCAACTGG +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIAAGIQ*CNYGNW
Trigger: CCAGTTGCCATAATTGCACAACTGGATTCCAGCTGC...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAACTGGACAGACCTGTTAATCTTTACACAATaGGACAGTGAGGAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: LLPAAGIQLCNYGNWTDLLIFTQ*DSEEQS
Trigger: ACTTTGCTCCTCACTGTCCAATTGTGTAAAGATTAA...CAGGTCTGTCCAGTTGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATGTGCATCATCTAACTaGGACTCGTCATCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDECASSN*DSSSPA
Trigger: AGCAGGAGATGACGAGTCCAAGTTAGATGATGCACA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679008.1
CDS TCA 90 bp TTTCTGTCTGTTCTCTCTGTTTATCTACAGAAGAAACTTTCTCCTTaGGTTCCTGTTCTTCGTAGCGCCTTGAACTCTCTTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: FLSVLSVYLQKKLSP*VPVLRSALNSLSFL
Trigger: CAGAAAGGAAAGAGAGTTCAAGGCGCTACGAAGAACAGGAACTCAAGGAGAAAGTTTCTTCTGTAGATAAACAGAGAGAACAGACAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTCCACGTCTTGGCGCTaGTTCTTCATTCTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNSTSWR*FFILSL
Trigger: TAGAGAAAGAATGAAGAACAAGCGCCAAGACGTGGA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp AGTCTGATTGTTAAGCCACATCACCCCACCCTTTACAGTGCATATTTTCACTGTTACTTTGGTTGGTTTTaGAATTTCTCTGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SLIVKPHHPTLYSAYFHCYFGWF*NFSAGP
Trigger: TGGACCAGCAGAGAAATTCAAAAACCAACCAAAGTA...ACAGTGAAAATATGCACTGTAAAGGGTGGGGTGATGTGGCTTAACAATCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTTTTCTCTGTCTCGTTaGCCCCTAGTATCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYFSLSR*PLVSSL
Trigger: GAGGGAAGATACTAGGGGCAAACGAGACAGAGAAAA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATCAATTTGAGAACCTCTaGAGCCTCGACTTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNQFENL*SLDFPF
Trigger: AAAAGGGAAGTCGAGGCTCAAGAGGTTCTCAAATTG...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGTCGAATTGGTGAGCTaGGTCTTTGATCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYVELVS*VFDLSL
Trigger: GAGAGAGAGATCAAAGACCAAGCTCACCAATTCGAC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAATTCCCTGATGTCGAATaGGTGAGCTTGGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEFPDVE*VSLVFD
Trigger: ATCAAAGACCAAGCTCACCAATTCGACATCAGGGAA...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTCTCGTCCTTTGTCTTaGTCTTCCCAATCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNSRPLS*SSQSLW
Trigger: CCAAAGGGATTGGGAAGACAAAGACAAAGGACGAGA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCTCGTCCTTTGTCTTaGTCTTCCCAATCCCTTTGG +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISRPLS*SSQSLW
Trigger: CCAAAGGGATTGGGAAGACAAAGACAAAGGACGAGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACCATCATGTCCATCTCTaGGATTCCTATCTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNHHVHL*DSYLLG
Trigger: TCCGAGAAGATAGGAATCCAAGAGATGGACATGATG...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGTTGAGGTCGTACAACTaGGCTCAAGAGTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLLRSYN*AQESVF
Trigger: AAACACAGACTCTTGAGCCAAGTTGTACGACCTCAA...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATAAGAGAACGAGATTCTaGAGGTCGTACAACTTGGCT +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNKRTRF*RSYNLA
Trigger: AGCCAAGTTGTACGACCTCAAGAATCTCGTTCTCTT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATGACCATCTTCAGATGTaGTCTCTATGTTACCCCTCT +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNDHLQM*SLCYPS
Trigger: AGAGGGGTAACATAGAGACAACATCTGAAGATGGTC...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGACCATCTTCAGATGTaGTCTCTATGTTACCCCTCT +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNDHLQM*SLCYPS
Trigger: AGAGGGGTAACATAGAGACAACATCTGAAGATGGTC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGGACCATCTTCAGATGTaGTCTCTATGTTACCCCTCT +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLDHLQM*SLCYPS
Trigger: AGAGGGGTAACATAGAGACAACATCTGAAGATGGTC...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACAAGTCTTTTCTTCTTACTTaGCTGGGCTGCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: KLRLTGVICLRSQNQPNKSFLLT*LGCFFI
Trigger: GATGAAGAAGCAGCCCAGCAAAGTAAGAAGAAAAGA...CTTGTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTTGAACTATGGCTTCTaGAATCCTGGCGATCTGAAG +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNLNYGF*NPGDLK
Trigger: CTTCAGATCGCCAGGATTCAAGAAGCCATAGTTCAA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACTTGAACTATGGCTTCTaGAATCCTGGCGATCTGAAG +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNLNYGF*NPGDLK
Trigger: CTTCAGATCGCCAGGATTCAAGAAGCCATAGTTCAA...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACGTTCACCTTCCAGTTTaGCTTCACAGCGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYVHLPV*LHSVSQ
Trigger: CTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAAC...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACGTTCACCTTCCAGTTTaGCTTCACAGCGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNVHLPV*LHSVSQ
Trigger: CTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAAC...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTTCCACGTCTTGGCGCTaGTTCTTCATTCTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAISTSWR*FFILSL
Trigger: TAGAGAAAGAATGAAGAACAAGCGCCAAGACGTGGA...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATTTCGCTTCGGAGATTaGCTAGACTTTCTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAFRFGD*LDFLRE
Trigger: TTCTCTAAGAAAGTCTAGCAAATCTCCGAAGCGAAA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATTTCGCTTCGGAGATTaGCTAGACTTTCTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKFRFGD*LDFLRE
Trigger: TTCTCTAAGAAAGTCTAGCAAATCTCCGAAGCGAAA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACAAGACGACTTCGGGCTaGATTTTCGCTTCGGAGATT +
Preference number: 5 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYKTTSG*IFASEI
Trigger: AATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCTT...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACGTCTTCCTATCTTTCTaGCTAGCTGAAGACGACTTC +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNVFLSF*LAEDDF
Trigger: GAAGTCGTCTTCAGCTAGCAAGAAAGATAGGAAGAC...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTGTCTTCCTATCTTTCTaGCTAGCTGAAGACGACTTC +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIVFLSF*LAEDDF
Trigger: GAAGTCGTCTTCAGCTAGCAAGAAAGATAGGAAGAC...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATGAAGTAGACCTTGGCTaGTCTCTCTTTTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNEVDLG*SLFSLC
Trigger: ACAAAGAGAAAAGAGAGACAAGCCAAGGTCTACTTC...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACGAAGTAGACCTTGGCTaGTCTCTCTTTTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNEVDLG*SLFSLC
Trigger: ACAAAGAGAAAAGAGAGACAAGCCAAGGTCTACTTC...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAAGAAGTAGACCTTGGCTaGTCTCTCTTTTCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEEVDLG*SLFSLC
Trigger: ACAAAGAGAAAAGAGAGACAAGCCAAGGTCTACTTC...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCAATTTGAGAACCTCTaGAGCCTCGACTTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIQFENL*SLDFPF
Trigger: AAAAGGGAAGTCGAGGCTCAAGAGGTTCTCAAATTG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACCAAAGGAAGAATCCCTaGCTTGATCTCTGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNQRKNP*LDLCCL
Trigger: GAGACAACAGAGATCAAGCAAGGGATTCTTCCTTTG...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCATCATGTCCATCTCTaGGATTCCTATCTTCTCGGA +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIHHVHL*DSYLLG
Trigger: TCCGAGAAGATAGGAATCCAAGAGATGGACATGATG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTTGGCAAAAGTATTATaGGTGGTATTGGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNLAKVL*VVLVGV
Trigger: CACCCCCACCAATACCACCAATAATACTTTTGCCAA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTTGAACTATGGCTTCTaGAATCCTGGCGATCTGAAG +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNLNYGF*NPGDLK
Trigger: CTTCAGATCGCCAGGATTCAAGAAGCCATAGTTCAA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CAGACATGCAACACCACGCCTGGCCTGTTAATAAGTAATTTTCATACAAAAAGGCATGTTTCTTTGACTTaGGCAAAGAGTTCAGAACCT +
Preference number: 5 (lower is better)
Translates to: QTCNTTPGLLISNFHTKRHVSLT*AKSSEP
Trigger: AGGTTCTGAACTCTTTGCCAAAGTCAAAGAAACATG...CCTTTTTGTATGAAAATTACTTATTAACAGGCCAGGCGTGGTGTTGCATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATATTCATTGTCTACCATaGGAGCACTCGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNIHCLP*EHSCKL
Trigger: AAGCTTACACGAGTGCTCCAATGGTAGACAATGAAT...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCAATTGCAGACATACTCTaGCCCTTTATCTATCTACAC +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAIADIL*PFIYLH
Trigger: GTGTAGATAGATAAAGGGCAAGAGTATGTCTGCAAT...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS GCA 90 bp ATGTCTTTTTCCAATGTCTTGTCACATATGGCTTTAGAACTCCAGTaGGTGCAGATCAGGTATTTACATAATCTTCCAGTATTCCTAGCT +
Preference number: 5 (lower is better)
Translates to: MSFSNVLSHMALELQ*VQIRYLHNLPVFLA
Trigger: AGCTAGGAATACTGGAAGATTATGTAAATACCTGATCTGCACGCACTGGAGTTCTAAAGCCATATGTGACAAGACATTGGAAAAAGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470308.1
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGCTAATTTTTGACATTTaGTATTCCTCCCCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLLIFDI*YSSPSS
Trigger: GGAGCTTGGGGAGGAATACAAAATGTCAAAAATTAG...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242848.8
CDS-3UTR CAA 90 bp GAAGTGACAGGTCAGATTTTTCAGCATATCAAGTTACTACTTAGGTATGCTTACTCTTTTCTTCTTACTTaGCTGGGCTGCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: EVTGQIFQHIKLLLRYAYSFLLT*LGCFFI
Trigger: GATGAAGAAGCAGCCCAGCAAAGTAAGAAGAAAAGA...GTAAGCATACCTAAGTAGTAACTTGATATGCTGAAAAATCTGACCTGTCACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTCTTTTCTTCTTACTTaGCTGGGCTGCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNSFLLT*LGCFFI
Trigger: GATGAAGAAGCAGCCCAGCAAAGTAAGAAGAAAAGA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTTGGCAAAAGTATTATaGGTGGTATTGGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYLAKVL*VVLVGV
Trigger: CACCCCCACCAATACCACCAATAATACTTTTGCCAA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp CTGAAATCCAGATCATCCGGCCTTACAGACCAAGCTCTTAATCACTTTGTTAAATTCTCTCGGATTTATTaGTTTCTTCAAATCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LKSRSSGLTDQALNHFVKFSRIY*FLQIPA
Trigger: TGCAGGGATTTGAAGAAACAAATAAATCCGAGAGAA...TTTAACAAAGTGATTAAGAGCTTGGTCTGTAAGGCCGGATGATCTGGATTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATTCTCTCGGATTTATTaGTTTCTTCAAATCCCTGCA +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMAFSRIY*FLQIPA
Trigger: TGCAGGGATTTGAAGAAACAAATAAATCCGAGAGAA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATCATGTTTCTTTGACTTaGGCAAAGAGTTCAGAACCT +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNHVSLT*AKSSEP
Trigger: AGGTTCTGAACTCTTTGCCAAAGTCAAAGAAACATG...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACAGTAATGCAGCCATATaGAGAGCCCCCAATTCATGT +
Preference number: 5 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYSNAAI*RAPNSC
Trigger: ACATGAATTGGGGGCTCTCAATATGGCTGCATTACT...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACATTCATTGTCTACCATaGGAGCACTCGTGTAAGCTT +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNIHCLP*EHSCKL
Trigger: AAGCTTACACGAGTGCTCCAATGGTAGACAATGAAT...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTATGGCATCAAACCAAAGAACTTaGCAAAAGAATATGCACTGC +
Preference number: 5 (lower is better)
Translates to: IYTIPYYQQLESSCAIMASNQRT*QKNMHC
Trigger: GCAGTGCATATTCTTTTGCAAAGTTCTTTGGTTTGA...TGCCATAATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACTTCTCCTGCTCTGTTaGCAATTATACATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDELLLLC*QLYMLS
Trigger: TGAAAGCATGTATAATTGCAAACAGAGCAGGAGAAG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATAAAATTGAGGCTCACAGGAGTTATTTGCTTAAGGTCACAGAACCAACCAAACCTAATTTTTGACATTTaGTACTACAGGCCGCTAGGA +
Preference number: 5 (lower is better)
Translates to: IKLRLTGVICLRSQNQPNLIFDI*YYRPLG
Trigger: TCCTAGCGGCCTGTAGTACAAAATGTCAAAAATTAG...GTTTGGTTGGTTCTGTGACCTTAAGCAAATAACTCCTGTGAGCCTCAATTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282007.7
CDS-3UTR CAA 90 bp TTATCTATCTACACAATTCCTTATTACCAGCAGCTGGAATCCAGTTGTGCAATTCATGTTTCTTTGACTTaGGCAAAGAGTTCAGAACCT +
Preference number: 5 (lower is better)
Translates to: LSIYTIPYYQQLESSCAIHVSLT*AKSSEP
Trigger: AGGTTCTGAACTCTTTGCCAAAGTCAAAGAAACATG...AATTGCACAACTGGATTCCAGCTGCTGGTAATAAGGAATTGTGTAGATAGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGAGATTGTCTGCATCTTaGGGTTTTTCTAAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLRLSAS*GFSKSL
Trigger: GAGACTTTTAGAAAAACCCAAAGATGCAGACAATCT...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp GGAAAAGGACACAAGGAAATTCTGATTAAAGTCTTCTCCTGCTCTGTTTGCAATTCAAACCAAAGAACTTaGCAAAAGAATATGCACTGC +
Preference number: 5 (lower is better)
Translates to: GKGHKEILIKVFSCSVCNSNQRT*QKNMHC
Trigger: GCAGTGCATATTCTTTTGCAAAGTTCTTTGGTTTGA...ATTGCAAACAGAGCAGGAGAAGACTTTAATCAGAATTTCCTTGTGTCCTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCACGTGGTCTGTACAACATAGTACTGCACAATGTGAGCAATTACTTTGATGAACAGGTTACGTTAGGTTaGTTAACTCTTGATTTGCTT +
Preference number: 5 (lower is better)
Translates to: SRGLYNIVLHNVSNYFDEQVTLG*LTLDLL
Trigger: AAGCAAATCAAGAGTTAACAAACCTAACGTAACCTG...TTCATCAAAGTAATTGCTCACATTGTGCAGTACTATGTTGTACAGACCACGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp TCTTTGTGCTACAGAGAACAATATTATCCACTAAAATCAGGAAGTGGCTTCCTGCTAATTTTTGACATTTaGTACTATTCCTCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: SLCYREQYYPLKSGSGFLLIFDI*YYSSPS
Trigger: GCTTGGGGAGGAATAGTACAAAATGTCAAAAATTAG...CAGGAAGCCACTTCCTGATTTTAGTGGATAATATTGTTCTCTGTAGCACAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACGTAAGACCATTTCCTTaGGCAGGTATCTTGTATAAA +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNVRPFP*AGILYK
Trigger: TTTATACAAGATACCTGCCAAAGGAAATGGTCTTAC...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp ATGGCTGATAAATCTTTTCTGCCTTTGTCACTAATGCTTGTCAAACCAAAGAACTTAATCTTTACACAATaGGACAGTGAGGAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: MADKSFLPLSLMLVKPKNLIFTQ*DSEEQS
Trigger: ACTTTGCTCCTCACTGTCCAATTGTGTAAAGATTAA...GTTCTTTGGTTTGACAAGCATTAGTGACAAAGGCAGAAAAGATTTATCAGCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACTCATGTTCAAAGAGATaGTCTGCATCTTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYSCSKR*SASLGF
Trigger: AAAACCCAAAGATGCAGACAATCTCTTTGAACATGA...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS-3UTR CAA 90 bp AGCAAGTTGAGGTGTAAAAGCATCACCAACAATAGTATGTACCTTAATCTTTACCAGGTTACGTTAGGTTaGTTAACTCTTGATTTGCTT +
Preference number: 5 (lower is better)
Translates to: SKLRCKSITNNSMYLNLYQVTLG*LTLDLL
Trigger: AAGCAAATCAAGAGTTAACAAACCTAACGTAACCTG...GTAAAGATTAAGGTACATACTATTGTTGGTGATGCTTTTACACCTCAACTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CAA 72 bp GAAAGCGATGCGCGCGCGGCTCCCGGGAACCGGCTCTaGGCTAGCGAGGAGCCCCCGGGATGGCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: ESDARAAPGNRL*ASEEPPGWLRS
Trigger: GCTTCTCAGCCATCCCGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCCGGGAGCCGCGCGCGCATCGCTTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS TCA 72 bp ACCGGCTCTTGGCTAGCGAGGAGCCCCCGGGATGGCTaGGAAGCAGAACCAACCCGCCCGCCGCCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: TGSWLARSPRDG*EAEPTRPPPLQ
Trigger: CTGGAGAGGCGGCGGGCGGGTTGGTTCTGCTTCTCAGCCATCCCGGGGGCTCCTCGCTAGCCAAGAGCCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS CCA 72 bp GGGAACCGGCTCTTGGCTAGCGAGGAGCCCCCGGGATaGCTGAGAAGCAGAACCAACCCGCCCGCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: GNRLLASEEPPG*LRSRTNPPAAS
Trigger: AGAGGCGGCGGGCGGGTTGGTTCTGCTTCTCAGCCATCCCGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS CCA 72 bp TCCGAGGAGCGGGGGAGGCGACTCTGTCCCCGCGCCTaGACCCAGGAGGACGACGACGAGGAGAAAGCGATG +
Preference number: 6 (lower is better)
Translates to: SEERGRRLCPRA*TQEDDDEEKAM
Trigger: CATCGCTTTCTCCTCGTCGTCGTCCTCCTGGGTCCAGGCGCGGGGACAGAGTCGCCTCCCCCGCTCCTCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS CAA 90 bp CGACGAGGAGAAAGCGATGCGCGCGCGGCTCCCGGGAACCGGCTCTaGGCTAGCGAGGAGCCCCCGGGATGGCTGAGAAGCAGAACCAAC +
Preference number: 6 (lower is better)
Translates to: RRGESDARAAPGNRL*ASEEPPGWLRSRTN
Trigger: GTTGGTTCTGCTTCTCAGCCATCCCGGGGGCTCCTCGCTAGCCAAGAGCCGGTTCCCGGGAGCCGCGCGCGCATCGCTTTCTCCTCGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000428921.1
ENST00000679008.1
CDS CCA 72 bp GACCTTCACGGTCCCTGTAGTCATGGGCATCACGAGTaGACCGAGAATCTCTGGGATCACGGCTCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: DLHGPCSHGHHE*TENLWDHGSLW
Trigger: CCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCACTCGTGATGCCCATGACTACAGGGACCGTGAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp GAATCATTGGATGGGGAGCGAAGACGACCAGACGTATaGCTACGGTTACTCCGATTGCTCCCGAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ESLDGERRRPDV*LRLLRLLPRLL
Trigger: CAGCAGCCTCGGGAGCAATCGGAGTAACCGTAGTCATACGTCTGGTCGTCTTCGCTCCCCATCCAATGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp GCCAGTTACGGCACTGTGTCTCTGCTGTACTGCCAGTaGTGGGTCCAAGCCTCTCAAATACACTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: ASYGTVSLLYCQ*WVQASQIHWVF
Trigger: GAAGACCCAGTGTATTTGAGAGGCTTGGACCCAGCACTGGCAGTACAGCAGAGACACAGTGCCGTAACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS GCA 72 bp GGCCAATCTTTATCAGCATCTCGGTCCCATTCTCTCTaGCTCGTATCTCTCCTCTCTCTCTCGCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: GQSLSASRSHSL*LVSLLSLSRSL
Trigger: CAGAGAGCGCGAGAGAGAGAGGAGAGATACGAGGCAGAGAGAATGGGACCGAGATGCTGATAAAGATTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp CTTTCGACCACTTTGGTCATCTCCACTTCGATGGGCTaGATCATTGGATGGGGAGCGAAGACGACCAGACGT +
Preference number: 6 (lower is better)
Translates to: LSTTLVISTSMG*IIGWGAKTTRR
Trigger: ACGTCTGGTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGAGATGACCAAAGTGGTCGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp CATGTCTCCCTTTCTCTCGCATTGGAGAGCGATGTCTaGGAGGACTCTGCTTTCTCTGGGGAGACGACAAAG +
Preference number: 6 (lower is better)
Translates to: HVSLSLALESDV*EDSAFSGETTK
Trigger: CTTTGTCGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp GAGACTGTGAAGTTCGTTCATGATCATGTCTCCCTTTCTCTCGCATaGGAGAGCGATGTCTTGGAGGACTCTGCTTTCTCTGGGGAGACG +
Preference number: 6 (lower is better)
Translates to: ETVKFVHDHVSLSLA*ESDVLEDSAFSGET
Trigger: CGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGAGACATGATCATGAACGAACTTCACAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp GATCACGGCTCTCTTTGGTATCTCTGCTATAATCTCTCATCTCCCTaGAGTCCCGCATGTCTCTGGAGTCTCTTAGTTCCCTTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: DHGSLWYLCYNLSSP*SPACLWSLLVPFGP
Trigger: GGGACCGAAGGGAACTAAGAGACTCCAGAGACATGCGGGACTCAAGGGAGATGAGAGATTATAGCAGAGATACCAAAGAGAGCCGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp ATGACTACGGTTACTCCGATTGCTCCCGAGGCTGCTGCTCCTCTTTaGATCCATAGGCTTGCGATGCTGTGCATCTTCTATAGTCACGTG +
Preference number: 6 (lower is better)
Translates to: MTTVTPIAPEAAAPL*IHRLAMLCIFYSHV
Trigger: CACGTGACTATAGAAGATGCACAGCATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAGCCTCGGGAGCAATCGGAGTAACCGTAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp CTAACAGGTGAGGATGACTCCTCTGTATTTCGTTTCTaGGGCTCAGTGTCCACGTCTTGGCGCTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LTGEDDSSVFRF*GSVSTSWRLFF
Trigger: GAAGAACAAGCGCCAAGACGTGGACACTGAGCCCCAGAAACGAAATACAGAGGAGTCATCCTCACCTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS CCA 72 bp ATGTCTCCCTTTCTCTCGCATTGGAGAGCGATGTCTTaGAGGACTCTGCTTTCTCTGGGGAGACGACAAAGA +
Preference number: 6 (lower is better)
Translates to: MSPFLSHWRAMS*RTLLSLGRRQR
Trigger: TCTTTGTCGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp CACTTTGGTCATCTCCACTTCGATGGGCTGAATCATTaGATGGGGAGCGAAGACGACCAGACGTATGACTAC +
Preference number: 6 (lower is better)
Translates to: HFGHLHFDGLNH*MGSEDDQTYDY
Trigger: GTAGTCATACGTCTGGTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGAGATGACCAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp ACTCTCTTTCGACCACTTTGGTCATCTCCACTTCGATaGGCTGAATCATTGGATGGGGAGCGAAGACGACCA +
Preference number: 6 (lower is better)
Translates to: TLFRPLWSSPLR*AESLDGERRRP
Trigger: TGGTCGTCTTCGCTCCCCATCCAATGATTCAGCCCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp GTTACTCCGATTGCTCCCGAGGCTGCTGCTCCTCTTTaGATCCATAGGCTTGCGATGCTGTGCATCTTCTAT +
Preference number: 6 (lower is better)
Translates to: VTPIAPEAAAPL*IHRLAMLCIFY
Trigger: ATAGAAGATGCACAGCATCGCAAGCCTATGGATCAAAAGAGGAGCAGCAGCCTCGGGAGCAATCGGAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp TTCTCTCGCATTGGAGAGCGATGTCTTGGAGGACTCTaGTTTCTCTGGGGAGACGACAAAGAATGTGAAGGA +
Preference number: 6 (lower is better)
Translates to: FSRIGERCLGGL*FLWGDDKECEG
Trigger: TCCTTCACATTCTTTGTCGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAATGCGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp CTCGTTCTCGTTCTCGCAATCTATCTCGATCCCTGTTaGGTGGCCAATCTTTATCAGCATCTCGGTCCCATT +
Preference number: 6 (lower is better)
Translates to: LVLVLAIYLDPC*VANLYQHLGPI
Trigger: AATGGGACCGAGATGCTGATAAAGATTGGCCACGCAACAGGGATCGAGATAGATTGCGAGAACGAGAACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp AAGAGTGCAGCCCCAGGCTCTCGTGGTTCTTTTGGATaGTTTGGCATAAGACCAGACCAATCCACATCTATC +
Preference number: 6 (lower is better)
Translates to: KSAAPGSRGSFG*FGIRPDQSTSI
Trigger: GATAGATGTGGATTGGTCTGGTCTTATGCCAAAGCATCCAAAAGAACCACGAGAGCCTGGGGCTGCACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp GCTCGTCATTCCTTCCCTGATGTCGAATTGGTGAGCTaGGTCTTTGATCTCTCTCTCTGTTGTCACGACGGT +
Preference number: 6 (lower is better)
Translates to: ARHSFPDVELVS*VFDLSLCCHDG
Trigger: ACCGTCGTGACAACAGAGAGAGAGATCAAAGACCAAGCTCACCAATTCGACATCAGGGAAGGAATGACGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp TCTCGTTCTCGTTCTCGCAATCTATCTCGATCCCTGTaGCGTGGCCAATCTTTATCAGCATCTCGGTCCCAT +
Preference number: 6 (lower is better)
Translates to: SRSRSRNLSRSL*RGQSLSASRSH
Trigger: ATGGGACCGAGATGCTGATAAAGATTGGCCACGCAACAGGGATCGAGATAGATTGCGAGAACGAGAACGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp GTTCATGATCATGTCTCCCTTTCTCTCGCATTGGAGAGCGATGTCTaGGAGGACTCTGCTTTCTCTGGGGAGACGACAAAGAATGTGAAG +
Preference number: 6 (lower is better)
Translates to: VHDHVSLSLALESDV*EDSAFSGETTKNVK
Trigger: CTTCACATTCTTTGTCGTCTCCCCAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGAGACATGATCATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp CATCACCTGCCAGAATTTCATCTAGTTCGTCATCACTaGTTGGCTCGTATCCTTCTCCAGCACCAGAGCCTA +
Preference number: 6 (lower is better)
Translates to: HHLPEFHLVRHH*LARILLQHQSL
Trigger: TAGGCTCTGGTGCTGGAGAAGGATACGAGCCAATCAGTGATGACGAACTAGATGAAATTCTGGCAGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp CATGTACGAATCTACATGTGTTTCCATAGAGGCAGTTaGCAGTCTTCAGCCAGTTACGGCACTGTGTCTCTG +
Preference number: 6 (lower is better)
Translates to: HVRIYMCFHRGS*QSSASYGTVSL
Trigger: CAGAGACACAGTGCCGTAACTGGCTGAAGACTGGCAACTGCCTCTATGGAAACACATGTAGATTCGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS GCA 72 bp GAGAATCTCTGGGATCACGGCTCTCTTTGGTATCTCTaGTATAATCTCTCATCTCCCTTGAGTCCCGCATGT +
Preference number: 6 (lower is better)
Translates to: ENLWDHGSLWYL*YNLSSPLSPAC
Trigger: ACATGCGGGACTCAAGGGAGATGAGAGATTATAGCAGAGATACCAAAGAGAGCCGTGATCCCAGAGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp GCTGCTCCTCTTTTGATCCATAGGCTTGCGATGCTGTaGATCTTCTATAGTCACGTGAGGCGTCTCTACTTT +
Preference number: 6 (lower is better)
Translates to: AAPLLIHRLAML*IFYSHVRRLYF
Trigger: AAAGTAGAGACGCCTCACGTGACTATAGAAGATGCACAGCATCGCAAGCCTATGGATCAAAAGAGGAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp AGTTCGTTCATGATCATGTCTCCCTTTCTCTCGCATTaGAGAGCGATGTCTTGGAGGACTCTGCTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: SSFMIMSPFLSH*RAMSWRTLLSL
Trigger: CAGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGAGACATGATCATGAACGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp TGTAGTCATGGGCATCACGAGTGGACCGAGAATCTCTaGGATCACGGCTCTCTTTGGTATCTCTGCTATAAT +
Preference number: 6 (lower is better)
Translates to: CSHGHHEWTENL*DHGSLWYLCYN
Trigger: ATTATAGCAGAGATACCAAAGAGAGCCGTGATCCCAGAGATTCTCGGTCCACTCGTGATGCCCATGACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp CTTGAGCCACTGTGCAGTACTCTCTTTCGACCACTTTaGTCATCTCCACTTCGATGGGCTGAATCATTGGAT +
Preference number: 6 (lower is better)
Translates to: LEPLCSTLFRPL*SSPLRWAESLD
Trigger: ATCCAATGATTCAGCCCATCGAAGTGGAGATGACCAAAGTGGTCGAAAGAGAGTACTGCACAGTGGCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp TTCTCGTTCTCGCAATCTATCTCGATCCCTGTTGCGTaGCCAATCTTTATCAGCATCTCGGTCCCATTCTCT +
Preference number: 6 (lower is better)
Translates to: FSFSQSISIPVA*PIFISISVPFS
Trigger: AGAGAATGGGACCGAGATGCTGATAAAGATTGGCCACGCAACAGGGATCGAGATAGATTGCGAGAACGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp CAGCACCAGAGCCTAATGAATGTGCATCATCTAACTTaGACTCGTCATCTCCTGCTTCCAGACTCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: QHQSLMNVHHLT*TRHLLLPDSQF
Trigger: GAACTGAGAGTCTGGAAGCAGGAGATGACGAGTCCAAGTTAGATGATGCACATTCATTAGGCTCTGGTGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp TTTCGTTTCTGGGGCTCAGTGTCCACGTCTTGGCGCTaGTTCTTCATTCTTTCTCTAAGATCCCCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: FRFWGSVSTSWR*FFILSLRSPVG
Trigger: ACCTACAGGGGATCTTAGAGAAAGAATGAAGAACAAGCGCCAAGACGTGGACACTGAGCCCCAGAAACGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS CAA 72 bp CACGCTCAAGCTCGTCATTCCTTCCCTGATGTCGAATaGGTGAGCTTGGTCTTTGATCTCTCTCTCTGTTGT +
Preference number: 6 (lower is better)
Translates to: HAQARHSFPDVE*VSLVFDLSLCC
Trigger: ACAACAGAGAGAGAGATCAAAGACCAAGCTCACCAATTCGACATCAGGGAAGGAATGACGAGCTTGAGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp ATCTCTTCTCGCTTTTCTCTGCGGTCATCTCGTCCTTaGTCTTTGTCTTCCCAATCCCTTTGGCGTTCTCGT +
Preference number: 6 (lower is better)
Translates to: ISSRFSLRSSRP*SLSSQSLWRSR
Trigger: ACGAGAACGCCAAAGGGATTGGGAAGACAAAGACAAAGGACGAGATGACCGCAGAGAAAAGCGAGAAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp CCAGCACCAGAGCCTAATGAATGTGCATCATCTAACTaGGACTCGTCATCTCCTTCCAGACTCTCAGTTCTC +
Preference number: 6 (lower is better)
Translates to: PAPEPNECASSN*DSSSPSRLSVL
Trigger: GAGAACTGAGAGTCTGGAAGGAGATGACGAGTCCAAGTTAGATGATGCACATTCATTAGGCTCTGGTGCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242848.8
CDS CAA 72 bp CCAGCACCAGAGCCTAATGAATGTGCATCATCTAACTaGGACTCGTCATCTCCTGCTTCCAGACTCTCAGTT +
Preference number: 6 (lower is better)
Translates to: PAPEPNECASSN*DSSSPASRLSV
Trigger: AACTGAGAGTCTGGAAGCAGGAGATGACGAGTCCAAGTTAGATGATGCACATTCATTAGGCTCTGGTGCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp TCCTCTGTATTTCGTTTCTGGGGCTCAGTGTCCACGTCTTGGCGCTaGTTCTTCATTCTTTCTCTAAGATCCCCTGTAGGTCTTTCTGGT +
Preference number: 6 (lower is better)
Translates to: SSVFRFWGSVSTSWR*FFILSLRSPVGLSG
Trigger: ACCAGAAAGACCTACAGGGGATCTTAGAGAAAGAATGAAGAACAAGCGCCAAGACGTGGACACTGAGCCCCAGAAACGAAATACAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS CAA 90 bp TGGTCCAACAGGGGAGAAGATACTGCAGATGTCTTCCTATCTTTCTaGCTAGCTGAAGACGACTTCGGGCTTGATTTTCGCTTCGGAGAT +
Preference number: 6 (lower is better)
Translates to: WSNRGEDTADVFLSF*LAEDDFGLDFRFGD
Trigger: ATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCTTCAGCTAGCAAGAAAGATAGGAAGACATCTGCAGTATCTTCTCCCCTGTTGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000464597.2
ENST00000470308.1
ENST00000679008.1
CDS CAA 90 bp TTCTTTCATCACGCTCAAGCTCGTCATTCCTTCCCTGATGTCGAATaGGTGAGCTTGGTCTTTGATCTCTCTCTCTGTTGTCACGACGGT +
Preference number: 6 (lower is better)
Translates to: FFHHAQARHSFPDVE*VSLVFDLSLCCHDG
Trigger: ACCGTCGTGACAACAGAGAGAGAGATCAAAGACCAAGCTCACCAATTCGACATCAGGGAAGGAATGACGAGCTTGAGCGTGATGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp ATCTTCCCTCCTTTCATGGCGTCGATCATGAGACTGTaGAGTTCGTTCATGATCATGTCTCCCTTTCTCTCG +
Preference number: 6 (lower is better)
Translates to: IFPPFMASIMRL*SSFMIMSPFLS
Trigger: CGAGAGAAAGGGAGACATGATCATGAACGAACTTCACAGTCTCATGATCGACGCCATGAAAGGAGGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp TCTGTGAGGTGCGAGGGACTAAGAGAACGAGATTCTTaGGGTCGTACAACTTGGCTCAAGAGTCTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: SVRCEGLRERDS*GRTTWLKSLCF
Trigger: AAAACACAGACTCTTGAGCCAAGTTGTACGACCTCAAGAATCTCGTTCTCTTAGTCCCTCGCACCTCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp ATAGGCTTGCGATGCTGTGCATCTTCTATAGTCACGTaGGGCGTCTCTACTTTTTCTACTCGTGTTCTGTGG +
Preference number: 6 (lower is better)
Translates to: IGLRCCASSIVT*GVSTFSTRVLW
Trigger: CCACAGAACACGAGTAGAAAAAGTAGAGACGCCTCACGTGACTATAGAAGATGCACAGCATCGCAAGCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp TCGCGCTCTCTGTCGTGTTCATATCGATCTCGTTCTTaGAGCCTGTCTCTGCTATCAAATGACCCAGATCTT +
Preference number: 6 (lower is better)
Translates to: SRSLSCSYRSRS*SLSLLSNDPDL
Trigger: AAGATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAGAACGAGATCGATATGAACACGACAGAGAGCGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp AACCAATTCCTCTTTAGTTGTTATAGGGGGAGTCCGTaGGCCTCTTTTCTTCTTACTTTGCTGGGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: NQFLFSCYRGSP*ASFLLTLLGCF
Trigger: GAAGCAGCCCAGCAAAGTAAGAAGAAAAGAGGCCCACGGACTCCCCCTATAACAACTAAAGAGGAATTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp CAGCACCAGAGCCTAATGAATGTGCATCATCTAACTTaGACTCGTCATCTCCTTCCAGACTCTCAGTTCTCT +
Preference number: 6 (lower is better)
Translates to: QHQSLMNVHHLT*TRHLLPDSQFS
Trigger: AGAGAACTGAGAGTCTGGAAGGAGATGACGAGTCCAAGTTAGATGATGCACATTCATTAGGCTCTGGTGCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242848.8
CDS CAA 72 bp GAAGACGACTTCGGGCTTGATTTTCGCTTCGGAGATTaGCTAGACTTTCTTAGAGAAGGTGACGGGGACAAT +
Preference number: 6 (lower is better)
Translates to: EDDFGLDFRFGD*LDFLREGDGDN
Trigger: ATTGTCCCCGTCACCTTCTCTAAGAAAGTCTAGCAAATCTCCGAAGCGAAAATCAAGCCCGAAGTCGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000464597.2
ENST00000470308.1
ENST00000679008.1
CDS CAA 72 bp AGGGGAGAAGATACTGCAGATGTCTTCCTATCTTTCTaGCTAGCTGAAGACGACTTCGGGCTTGATTTTCGC +
Preference number: 6 (lower is better)
Translates to: RGEDTADVFLSF*LAEDDFGLDFR
Trigger: GCGAAAATCAAGCCCGAAGTCGTCTTCAGCTAGCAAGAAAGATAGGAAGACATCTGCAGTATCTTCTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000464597.2
ENST00000470308.1
ENST00000679008.1
CDS CAA 72 bp AAGTTCGTTCATGATCATGTCTCCCTTTCTCTCGCATaGGAGAGCGATGTCTTGGAGGACTCTGCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: KFVHDHVSLSLA*ESDVLEDSAFS
Trigger: AGAGAAAGCAGAGTCCTCCAAGACATCGCTCTCCAATGCGAGAGAAAGGGAGACATGATCATGAACGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp GTCATCTCGTCCTTTGTCTTTGTCTTCCCAATCCCTTaGGCGTTCTCGTTCTTTATCCCTTTCTCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: VISSFVFVFPIP*AFSFFIPFSRS
Trigger: AGAGCGAGAGAAAGGGATAAAGAACGAGAACGCCAAAGGGATTGGGAAGACAAAGACAAAGGACGAGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp CTTGAAGCCTGTCTCTGCTATCAAATGACCCAGATCTaGAATGGACCTGTCGATCTGACTCTGGAGAACTTC +
Preference number: 6 (lower is better)
Translates to: LEACLCYQMTQI*NGPVDLTLENF
Trigger: GAAGTTCTCCAGAGTCAGATCGACAGGTCCATTCAAGATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp GATCTCGTTCTTGAAGCCTGTCTCTGCTATCAAATGACCCAGATCTaGAATGGACCTGTCGATCTGACTCTGGAGAACTTCTTCTTGAAC +
Preference number: 6 (lower is better)
Translates to: DLVLEACLCYQMTQI*NGPVDLTLENFFLN
Trigger: GTTCAAGAAGAAGTTCTCCAGAGTCAGATCGACAGGTCCATTCAAGATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAGAACGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS TCA 72 bp GGTTCTCTGTCATCTCTGTGGTCTCTAGAAGAGCTCTaGTCCTGTTCATATTCTCGTTCTTCTCTTGAGTCC +
Preference number: 6 (lower is better)
Translates to: GSLSSLWSLEEL*SCSYSRSSLES
Trigger: GGACTCAAGAGAAGAACGAGAATATGAACAGGATCAGAGCTCTTCTAGAGACCACAGAGATGACAGAGAACC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp GTGATGTCTAGAAGATATAGGAGAATGATGCTGTCCTaGTGGGGAAGTAGACCTTGGCTTGTCTCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: VMSRRYRRMMLS*WGSRPWLVSLF
Trigger: GAAAAGAGAGACAAGCCAAGGTCTACTTCCCCAGCAGGACAGCATCATTCTCCTATATCTTCTAGACATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp CGTGTTCATATCGATCTCGTTCTTGAAGCCTGTCTCTaGTATCAAATGACCCAGATCTTGAATGGACCTGTC +
Preference number: 6 (lower is better)
Translates to: RVHIDLVLEACL*YQMTQILNGPV
Trigger: GACAGGTCCATTCAAGATCTGGGTCATTTGATAGCAGAGACAGGCTTCAAGAACGAGATCGATATGAACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp GGTGCCCTTCTCATTTTTAACAAGCTGCTTTCGAATTaGAGAATCCCGTCTGAAGCACAACGCCTTACAACA +
Preference number: 6 (lower is better)
Translates to: GALLIFNKLLSN*RIPSEAQRLTT
Trigger: TGTTGTAAGGCGTTGTGCTTCAGACGGGATTCTGCAATTCGAAAGCAGCTTGTTAAAAATGAGAAGGGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CCA 72 bp TCTCAAATGGTTTCGGCCATAACTCCGGGATTCTTCTaGATATGTATCCTCCTTTCGATGAGTATCTCGACC +
Preference number: 6 (lower is better)
Translates to: SQMVSAITPGFF*ICILLSMSIST
Trigger: GGTCGAGATACTCATCGAAAGGAGGATACATATCCAGAAGAATCCCGGAGTTATGGCCGAAACCATTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CCA 72 bp TTTCTCGATACTATTTATCACCCTACTGACCTCTGCTaGTCCAACAGGGGAGAAGATACTGCAGATGTCTTC +
Preference number: 6 (lower is better)
Translates to: FLDTIYHPTDLC*SNRGEDTADVF
Trigger: GAAGACATCTGCAGTATCTTCTCCCCTGTTGGACCAGCAGAGGTCAGTAGGGTGATAAATAGTATCGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464597.2
CDS CAA 72 bp CTCCTGCTTCCAGACTCTCAGTTCTCTCGGATTTATTaGTTTCTTCAAATCCCTGCACAGATCCCAGATCTT +
Preference number: 6 (lower is better)
Translates to: LLLPDSQFSRIY*FLQIPAQIPDL
Trigger: AAGATCTGGGATCTGTGCAGGGATTTGAAGAAACAAATAAATCCGAGAGAACTGAGAGTCTGGAAGCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp GAATCAGAAATTAGTCTCTCTCTTTCCCTATCCAAGTCTCTCCTTTaGTCTCGTTCTCTCTCTCGTTCTCGTTCTCGCAATCTATCTCGA +
Preference number: 6 (lower is better)
Translates to: ESEISLSLSLSKSLL*SRSLSRSRSRNLSR
Trigger: TCGAGATAGATTGCGAGAACGAGAACGAGAGAGAGAACGAGACAAAAGGAGAGACTTGGATAGGGAAAGAGAGAGACTAATTTCTGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp CTCGGGAAGTGCTTTCTAGATCCCTTTCATGTTCACCTTCCAGTTTaGCTTCACAGCGTTTCACAGACTCTATTTGAGAACTCTCAAAAG +
Preference number: 6 (lower is better)
Translates to: LGKCFLDPFHVHLPV*LHSVSQTLFENSQK
Trigger: CTTTTGAGAGTTCTCAAATAGAGTCTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAACATGAAAGGGATCTAGAAAGCACTTCCCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 90 bp TGGACTCGTCATCTCCTTCCAGACTCTCAGTTCTCTCGGATTTATTaGTTTCTTCAAATCCCTGCACAGATCCCAGATCTTTATCCATTC +
Preference number: 6 (lower is better)
Translates to: WTRHLLPDSQFSRIY*FLQIPAQIPDLYPF
Trigger: GAATGGATAAAGATCTGGGATCTGTGCAGGGATTTGAAGAAACAAATAAATCCGAGAGAACTGAGAGTCTGGAAGGAGATGACGAGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242848.8
CDS CAA 90 bp ACTCGTCATCTCCTGCTTCCAGACTCTCAGTTCTCTCGGATTTATTaGTTTCTTCAAATCCCTGCACAGATCCCAGATCTTTATCCATTC +
Preference number: 6 (lower is better)
Translates to: TRHLLLPDSQFSRIY*FLQIPAQIPDLYPF
Trigger: GAATGGATAAAGATCTGGGATCTGTGCAGGGATTTGAAGAAACAAATAAATCCGAGAGAACTGAGAGTCTGGAAGCAGGAGATGACGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282007.7
ENST00000679008.1
CDS GCA 72 bp GCTTGTTTTATGGTGCCCTTCTCATTTTTAACAAGCTaGTTTCGAATTGCAGAATCCCGTCTGAAGCACAAC +
Preference number: 6 (lower is better)
Translates to: ACFMVPFSFLTS*FRIAESRLKHN
Trigger: GTTGTGCTTCAGACGGGATTCTGCAATTCGAAAGCAGCTTGTTAAAAATGAGAAGGGCACCATAAAACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CAA 72 bp CATCTCCTTCCAGACTCTCAGTTCTCTCGGATTTATTaGTTTCTTCAAATCCCTGCACAGATCCCAGATCTT +
Preference number: 6 (lower is better)
Translates to: HLLPDSQFSRIY*FLQIPAQIPDL
Trigger: AAGATCTGGGATCTGTGCAGGGATTTGAAGAAACAAATAAATCCGAGAGAACTGAGAGTCTGGAAGGAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242848.8
CDS CAA 72 bp GTTGTTTCATGTCCTTGGCTTGTCTCTCTTTTCTCTTaGTCGTTCAAAATCTCGTCCTCTGTCCTTTCCATC +
Preference number: 6 (lower is better)
Translates to: VVSCPWLVSLFS*SFKISSSVLSI
Trigger: GATGGAAAGGACAGAGGACGAGATTTTGAACGACAAAGAGAAAAGAGAGACAAGCCAAGGACATGAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470308.1
CDS TCA 72 bp CCTTCTATAATTGCTGCTATAACCTTTACCACGAGGTaGAGGGCCATGTACGAATCTACATGTGTTTCCATA +
Preference number: 6 (lower is better)
Translates to: PSIIAAITFTTR*RAMYESTCVSI
Trigger: TATGGAAACACATGTAGATTCGTACATGGCCCTTCACCTCGTGGTAAAGGTTATAGCAGCAATTATAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000428921.1
ENST00000679008.1
CDS CAA 72 bp TGCTATTACTACTGTGACTATCAATTTGAGAACCTCTaGAGCCTCGACTTCCCTTTTCAGGTAACTCAGGAA +
Preference number: 6 (lower is better)
Translates to: CYYYCDYQFENL*SLDFPFQVTQE
Trigger: TTCCTGAGTTACCTGAAAAGGGAAGTCGAGGCTCAAGAGGTTCTCAAATTGATAGTCACAGTAGTAATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp TGCTTTCTAGATCCCTTTCATGTTCACCTTCCAGTTTaGCTTCACAGCGTTTCACAGACTCTATTTGAGAAC +
Preference number: 6 (lower is better)
Translates to: CFLDPFHVHLPV*LHSVSQTLFEN
Trigger: GTTCTCAAATAGAGTCTGTGAAACGCTGTGAAGCAAAACTGGAAGGTGAACATGAAAGGGATCTAGAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1
CDS CAA 72 bp GCACTGCTGAAGGAAGACAGTACCAAAAATACCATATaGAACTTCGGTCTTAAGACACACACAGTTCCTGTT +
Preference number: 6 (lower is better)
Translates to: ALLKEDSTKNTI*NFGLKTHTVPV
Trigger: AACAGGAACTGTGTGTGTCTTAAGACCGAAGTTCAATATGGTATTTTTGGTACTGTCTTCCTTCAGCAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CAA 90 bp CTAAGAAGACTTGCTCTTTCTTCTTTTCGTAGTAATGCAGCCATATaGAGAGCCCCCAATTCATGTTCAAAGAGATTGTCTGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: LRRLALSSFRSNAAI*RAPNSCSKRLSASL
Trigger: CAAAGATGCAGACAATCTCTTTGAACATGAATTGGGGGCTCTCAATATGGCTGCATTACTACGAAAAGAAGAAAGAGCAAGTCTTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CAA 90 bp AAAGAATATGCACTGCTGAAGGAAGACAGTACCAAAAATACCATATaGAACTTCGGTCTTAAGACACACACAGTTCCTGTTGGATACTGG +
Preference number: 6 (lower is better)
Translates to: KEYALLKEDSTKNTI*NFGLKTHTVPVGYW
Trigger: CCAGTATCCAACAGGAACTGTGTGTGTCTTAAGACCGAAGTTCAATATGGTATTTTTGGTACTGTCTTCCTTCAGCAGTGCATATTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS TCA 72 bp TTGCTCTTTCTTCTTTTCGTAGTAATGCAGCCATATTaGGAGCCCCCAATTCATGTTCAAAGAGATTGTCTG +
Preference number: 6 (lower is better)
Translates to: LLFLLFVVMQPY*EPPIHVQRDCL
Trigger: CAGACAATCTCTTTGAACATGAATTGGGGGCTCTCAATATGGCTGCATTACTACGAAAAGAAGAAAGAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CCA 72 bp AGTTTATTATCTTCAGTCTTTTCATGTCCTGGAGCATaGCAAGTAGTCTTCCGCTTAAATAACCGAAGACTC +
Preference number: 6 (lower is better)
Translates to: SLLSSVFSCPGA*QVVFRLNNRRL
Trigger: GAGTCTTCGGTTATTTAAGCGGAAGACTACTTGCCATGCTCCAGGACATGAAAAGACTGAAGATAATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CAA 72 bp CTTGCTCTTTCTTCTTTTCGTAGTAATGCAGCCATATaGAGAGCCCCCAATTCATGTTCAAAGAGATTGTCT +
Preference number: 6 (lower is better)
Translates to: LALSSFRSNAAI*RAPNSCSKRLS
Trigger: AGACAATCTCTTTGAACATGAATTGGGGGCTCTCAATATGGCTGCATTACTACGAAAAGAAGAAAGAGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS TCA 72 bp TTAAGACACACACAGTTCCTGTTGGATACTGGACTGTaGAAGTTTATTATCTTCAGTCTTTTCATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: LRHTQFLLDTGL*KFIIFSLFMSW
Trigger: CCAGGACATGAAAAGACTGAAGATAATAAACTTTCACAGTCCAGTATCCAACAGGAACTGTGTGTGTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242848.8
ENST00000679008.1
CDS CAA 72 bp TTTTTCTGGGAGTCCTCTAGAATACCATTCTTACCATaGCACATTTCAACCAATTCCTCTTTAGTTGTTATA +
Preference number: 6 (lower is better)
Translates to: FFWESSRIPFLP*HISTNSSLVVI
Trigger: TATAACAACTAAAGAGGAATTGGTTGAAATGTGCAATGGTAAGAATGGTATTCTAGAGGACTCCCAGAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242848.8
ENST00000282007.7
ENST00000679008.1