RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H12D (Homo sapiens)

Ensembl gene IDs: ENSG00000178199

Ensembl transcript IDs: ENST00000409806.8, ENST00000409948.1, ENST00000458251.1, ENST00000462655.1

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCATAGTCTGGAGGGCTGGCATGGTAACCAGAATGGGTGGATGCTaGCAGGAGAGGCCAGGGCCCCTGAGGATTCGGGGGTCGGCACTC +
Preference number: 1 (lower is better)
Translates to: AIVWRAGMVTRMGGC*QERPGPLRIRGSAL
Trigger: GAGTGCCGACCCCCGAATCCTCAGGGGCCCTGGCCTCTCCTGGCAGCATCCACCCATTCTGGTTACCATGCCAGCCCTCCAGACTATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 90 bp ACTTGGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTaGCTGTGCTCCTGTACTGCCCCCACACAAGGCCCTGAACAGGGC +
Preference number: 1 (lower is better)
Translates to: TWARAQAAEHQASAF*LCSCTAPTQGPEQG
Trigger: GCCCTGTTCAGGGCCTTGTGTGGGGGCAGTACAGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR TCA 90 bp GGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCCGCTaGGCACCAGGCCAGCGCTTTTTGACTGTGCTCCTGTACTGCCCC +
Preference number: 1 (lower is better)
Translates to: GSTAGGQNLGKSPGR*APGQRFLTVLLYCP
Trigger: GGGGCAGTACAGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR GCA 90 bp GGTTTGTGTCCAGGCTCCCGGCTTCTCAGACACAGCTTTGCTGTGTaGATGACCCCTGCATCCGACCCTGGCATGGGATCCTGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: GLCPGSRLLRHSFAV*MTPASDPGMGSWLP
Trigger: TGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGCCGGGAGCCTGGACACAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR GCA 90 bp GCAGCTGGGTTTGTGTCCAGGCTCCCGGCTTCTCAGACACAGCTTTaGTGTGTGCATGACCCCTGCATCCGACCCTGGCATGGGATCCTG +
Preference number: 1 (lower is better)
Translates to: AAGFVSRLPASQTQL*CVHDPCIRPWHGIL
Trigger: CAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGCCGGGAGCCTGGACACAAACCCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR CCA 90 bp AACTGGCAAGAGTTCCCTCTGCACCAGCAGGCTGCAGGAAGTTTGTaGGGCTGGGGGCTGGTCTTCTCTGGTCTTCCCCTGGGAAGTGCC +
Preference number: 1 (lower is better)
Translates to: NWQEFPLHQQAAGSL*GWGLVFSGLPLGSA
Trigger: GGCACTTCCCAGGGGAAGACCAGAGAAGACCAGCCCCCAGCCCCACAAACTTCCTGCAGCCTGCTGGTGCAGAGGGAACTCTTGCCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR GCA 90 bp AGGCTCCCGGCTTCTCAGACACAGCTTTGCTGTGTGCATGACCCCTaGATCCGACCCTGGCATGGGATCCTGGCTCCCATGAAATCACCG +
Preference number: 1 (lower is better)
Translates to: RLPASQTQLCCVHDP*IRPWHGILAPMKSP
Trigger: CGGTGATTTCATGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGCCGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR CCA 90 bp ACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATaGAAAATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGC +
Preference number: 1 (lower is better)
Translates to: TCGFYCSLDPQSPCT*KIIPSTEVGGPPRS
Trigger: GCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 90 bp CCTGACATTCTACAGTTCTACCCCAAACCCCCTTCCAGAGGCCTCTaGGAAGGCTGCCTCAGGGCAAACCCAAGATGGCAACAGCCTCTG +
Preference number: 1 (lower is better)
Translates to: PDILQFYPKPPSRGL*EGCLRANPRWQQPL
Trigger: CAGAGGCTGTTGCCATCTTGGGTTTGCCCTGAGGCAGCCTTCCCAGAGGCCTCTGGAAGGGGGTTTGGGGTAGAACTGTAGAATGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 90 bp TCTCAGACACAGCTTTGCTGTGTGCATGACCCCTGCATCCGACCCTaGCATGGGATCCTGGCTCCCATGAAATCACCGGCCAGGATGTCA +
Preference number: 1 (lower is better)
Translates to: SQTQLCCVHDPCIRP*HGILAPMKSPARMS
Trigger: TGACATCCTGGCCGGTGATTTCATGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTTTGTGTGGTGGGGGTATGTGTGTaGAGGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACT +
Preference number: 1 (lower is better)
Translates to: CVCVCVCVCVVGVCV*RPQKVALGQSAPTT
Trigger: AGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCCTTCACACACATACCCCCACCACACAAACACACACACACACACACACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 90 bp TGCATGACCCCTGCATCCGACCCTGGCATGGGATCCTGGCTCCCATaGAATCACCGGCCAGGATGTCAGTTCTACAATAACCCTGTCAGG +
Preference number: 1 (lower is better)
Translates to: CMTPASDPGMGSWLP*NHRPGCQFYNNPVR
Trigger: CCTGACAGGGTTATTGTAGAACTGACATCCTGGCCGGTGATTTCATGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR GCA 90 bp TGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTaGCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCC +
Preference number: 1 (lower is better)
Translates to: CPWELPAAHPAKGGP*HGLTASPGKGGFEP
Trigger: GGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 90 bp GCTACCAAGCCCTCTAGTGAACAAATGAGCCATAGTCTGGAGGGCTaGCATGGTAACCAGAATGGGTGGATGCTGCCAGGAGAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: ATKPSSEQMSHSLEG*HGNQNGWMLPGEAR
Trigger: CCTGGCCTCTCCTGGCAGCATCCACCCATTCTGGTTACCATGCCAGCCCTCCAGACTATGGCTCATTTGTTCACTAGAGGGCTTGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR GCA 90 bp TTTAGAAGTCTAGGAAATGGGCAAGCAGCCTGTGTCCTTGGGAACTaGCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCA +
Preference number: 1 (lower is better)
Translates to: FRSLGNGQAACVLGN*LLHIQQREVLAMAS
Trigger: TGAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCTGCTTGCCCATTTCCTAGACTTCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 90 bp ATGATAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTaGTGGGGGTATGTGTGTGAAGGCCCCAGAAGGTGGCCCTGGGAC +
Preference number: 1 (lower is better)
Translates to: MIDCVCVCVCVCVFV*WGYVCEGPRRWPWD
Trigger: GTCCCAGGGCCACCTTCTGGGGCCTTCACACACATACCCCCACCACACAAACACACACACACACACACACACACACACACAGTCTATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 90 bp TGCCCTGTCCCAGTCCACTGTGTTTGTGGTGGTGACCCACTAAATTaGTTTTGTGACCCACTTGTGGGTTCTACTGCAGCTTGGACCCGC +
Preference number: 1 (lower is better)
Translates to: CPVPVHCVCGGDPLN*FCDPLVGSTAAWTR
Trigger: GCGGGTCCAAGCTGCAGTAGAACCCACAAGTGGGTCACAAAATCAATTTAGTGGGTCACCACCACAAACACAGTGGACTGGGACAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 90 bp CGCTTTCCCCAAACTGCCAAGCTACCAAGCCCTCTAGTGAACAAATaGGCCATAGTCTGGAGGGCTGGCATGGTAACCAGAATGGGTGGA +
Preference number: 1 (lower is better)
Translates to: RFPQTAKLPSPLVNK*AIVWRAGMVTRMGG
Trigger: TCCACCCATTCTGGTTACCATGCCAGCCCTCCAGACTATGGCTCATTTGTTCACTAGAGGGCTTGGTAGCTTGGCAGTTTGGGGAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 90 bp GAAGGCTGCCTCAGGGCAAACCCAAGATGGCAACAGCCTCTGGTTTaGTCAGTCGAGGAGAGCTCTGCTGCATGTTTGAACAAGAAGAGC +
Preference number: 1 (lower is better)
Translates to: EGCLRANPRWQQPLV*SVEESSAACLNKKS
Trigger: GCTCTTCTTGTTCAAACATGCAGCAGAGCTCTCCTCGACTGATCAAACCAGAGGCTGTTGCCATCTTGGGTTTGCCCTGAGGCAGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 90 bp AAAGCCTATTCTGGAAACTGCCATGATGGATGGCTAATAAAATATTaGAGATACTTAACCCTTAGCCAAACAGTATGTGTCTGTGTGGTG +
Preference number: 1 (lower is better)
Translates to: KAYSGNCHDGWLIKY*RYLTLSQTVCVCVV
Trigger: CACCACACAGACACATACTGTTTGGCTAAGGGTTAAGTATCTCCAATATTTTATTAGCCATCCATCATGGCAGTTTCCAGAATAGGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATAAGGCCCCGGCCTCAGTaGGGATCACCAAGTGCCACC +
Preference number: 2 (lower is better)
Translates to: GPRRWPWDKALLPLVPSIRPRPQ*GSPSAT
Trigger: GGTGGCACTTGGTGATCCTCACTGAGGCCGGGGCCT...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATATTCCCTCCACGGAAGTaGGTGGACCTCCCCGCAGCA +
Preference number: 2 (lower is better)
Translates to: GPRRWPWDKALLPLVPSIFPPRK*VDLPAA
Trigger: TGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAA...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATACCTGATGGCACAGGGTaGGCTTTGCCCTGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: GPRRWPWDKALLPLVPSIPDGTG*ALPCPS
Trigger: ACTGGGACAGGGCAAAGCGCACCCTGTGCCATCAGG...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCCACTCAGGTCCAGGCTaGCAACCACAGGTCCACCCG +
Preference number: 2 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAHSGPG*QPQVHP
Trigger: CGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp CTGAGACCCGCAGCTGGGTTTGTGTCCAGGCTCCCGGCTTCTCAGACACAGCTTTGTGTGCATGACCCCTaGATCCGACCCTGGCATGGG +
Preference number: 2 (lower is better)
Translates to: LRPAAGFVSRLPASQTQLCVHDP*IRPWHG
Trigger: CCCATGCCAGGGTCGGATGCAGGGGTCATGCACACA...AAGCTGTGTCTGAGAAGCCGGGAGCCTGGACACAAACCCAGCTGCGGGTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR-3UTR CCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCCCCAGAAGGTGGCCCTaGGACAAAGCGCTCCTACCA +
Preference number: 2 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLPRRWP*DKALLP
Trigger: TGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGG...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCGAAGGCCCCAGAAGGTaGCCCTGGGACAAAGCGCTC +
Preference number: 2 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCEGPRR*PWDKAL
Trigger: GAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCCTTC...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCGGCAAGAGTTCCCTCTaGACCAGCAGGCTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLGKSSL*TSRLQE
Trigger: TTCCTGCAGCCTGCTGGTGCAGAGGGAACTCTTGCC...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCTCTCTGGTCTTCCCCTaGGAAGTGCCTCCCGCTTTC +
Preference number: 2 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLSLVFP*EVPPAF
Trigger: GAAAGCGGGAGGCACTTCCCAGGGGAAGACCAGAGA...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCGGGGCTGGTCTTCTCTaGTCTTCCCCTGGGAAGTGC +
Preference number: 2 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCGAGLL*SSPGKC
Trigger: GCACTTCCCAGGGGAAGACCAGAGAAGACCAGCCCC...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCTCTTCCCCTGGGAAGTaGCTCCCGCTTTCCCCAAAC +
Preference number: 2 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCSSPGK*LPLSPN
Trigger: GTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGA...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTCTCCACGGAAGTGGGTaGACCTCCCCGCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVLHGSG*TSPQQA
Trigger: GGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAG...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATTGTGGGGCTGGGGGCTaGTCTTCTCTGGTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHCGAGG*SSLVFP
Trigger: GGGGAAGACCAGAGAAGACCAGCCCCCAGCCCCACA...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AAGAGCTGGCTAGAAGGCTGGCATCCCCCAGGGTGCTGGGATAAAATTCTTAACCCCTGCATCCGACCCTaGCATGGGATCCTGGCTCCC +
Preference number: 2 (lower is better)
Translates to: KSWLEGWHPPGCWDKILNPCIRP*HGILAP
Trigger: GGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGG...GTTAAGAATTTTATCCCAGCACCCTGGGGGATGCCAGCCTTCTAGCCAGCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR-3UTR CCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCCAGTCTCCGTGCACATaGAAAATCATTCCCTCCACG +
Preference number: 2 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLQSPCT*KIIPST
Trigger: CGTGGAGGGAATGATTTTCCATGTGCACGGAGACTG...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCACCCAGAGCAGTAGCTaGCTAGAAGAAACGGCACCA +
Preference number: 2 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCTQSSS*LEETAP
Trigger: TGGTGCCGTTTCTTCTAGCCAGCTACTGCTCTGGGT...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCGGCTGCAGTGAGCTATaGTCACACTACTATACTCCA +
Preference number: 2 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAGCSEL*SHYYTP
Trigger: TGGAGTATAGTAGTGTGATCATAGCTCACTGCAGCC...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCGGTGGCAATAAACTCTaGCTGAGCTCATGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAGGNKL*LSSCQF
Trigger: AAACTGACATGAGCTCAGTCAGAGTTTATTGCCACC...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCAAAATTAGCTGGACGTaGTGGCACAACTGTAGTCCC +
Preference number: 2 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCKISWT*WHNCSP
Trigger: GGGACTACAGTTGTGCCACCACGTCCAGCTAATTTT...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AAGAGCTGGCTAGAAGGCTGGCATCCCCCAGGGTGCTGGGATAAAATTCTTAACCATCCGACCCTGGCATaGGATCCTGGCTCCCATGAA +
Preference number: 2 (lower is better)
Translates to: KSWLEGWHPPGCWDKILNHPTLA*DPGSHE
Trigger: TTCATGGGAGCCAGGATCCCATGCCAGGGTCGGATG...GTTAAGAATTTTATCCCAGCACCCTGGGGGATGCCAGCCTTCTAGCCAGCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR CAA 90 bp GGAAGGCTGCCTCAGGGCAAACCCAAGATGGCAACAGCCTCTGGTTaGATCAGTCGAGGAGAGCTCTGCTGCATGTTTGAACAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: GRLPQGKPKMATASG*ISRGELCCMFEQEE
Trigger: CTCTTCTTGTTCAAACATGCAGCAGAGCTCTCCTCGACTGATCAAACCAGAGGCTGTTGCCATCTTGGGTTTGCCCTGAGGCAGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCGCAATAAACTCTGACTaGGCTCATGTCAGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCAINSD*AHVSFL
Trigger: GAGAAAACTGACATGAGCTCAGTCAGAGTTTATTGC...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCCACACCTGGAGGCTaGGCTGCCCTTGCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIPTPGG*AALAGG
Trigger: CCCACCCGCAAGGGCAGCCCAGCCTCCAGGTGTGGG...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCTTCTGGAAACTGCCATaGTGGATGGCTAATAAAATA +
Preference number: 2 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLFWKLP*WMANKI
Trigger: TATTTTATTAGCCATCCATCATGGCAGTTTCCAGAA...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCAGTTTGAGGCTGCAGTaGGCTATGATCACACTACTA +
Preference number: 2 (lower is better)
Translates to: WNNTELRLLRLATTSVFFSLRLQ*AMITLL
Trigger: TAGTAGTGTGATCATAGCTCACTGCAGCCTCAAACT...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAAGGAGAGCCCACACCTaGAGGCTGGGCTGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIRRAHT*RLGCPC
Trigger: GCAAGGGCAGCCCAGCCTCCAGGTGTGGGCTCTCCT...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTGGTGACCCACTAAATTaGTTTTGTGACCCACTTGTG +
Preference number: 2 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVGDPLN*FCDPLV
Trigger: CACAAGTGGGTCACAAAATCAATTTAGTGGGTCACC...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGTGAGGATCACCAAGTaGCACCAGGCCCCCACAACC +
Preference number: 2 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIVRITK*HQAPTT
Trigger: GGTTGTGGGGGCCTGGTGGCACTTGGTGATCCTCAC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATCTTATTTACAAAGAATaGGTCATCTTCAGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHLIYKE*VIFRPE
Trigger: CTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAG...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGACGCAAGGCGAGGCTaGGCCATTCCCTGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILDARRG*AIPCKC
Trigger: GCACTTGCAGGGAATGGCCCAGCCTCGCCTTGCGTC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGGCAGGAGAATGGCATaGACCTGGGAGGCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILGRRMA*TWEAVE
Trigger: CTCCACTGCCTCCCAGGTTCATGCCATTCTCCTGCC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTAGGTGTATGCCACCATaGCTGGCTAAATTTTTGTAT +
Preference number: 2 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVRCMPP*LAKFLY
Trigger: ATACAAAAATTTAGCCAGGCATGGTGGCATACACCT...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAACCAGAATGGGTGGATaGTGCCAGGAGAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILTRMGG*CQERPG
Trigger: CCCTGGCCTCTCCTGGCAGCATCCACCCATTCTGGT...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTCCGCTTTCCCCAAACTaGCAAGCTACCAAGCCCTCT +
Preference number: 2 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFPLSPN*QATKPS
Trigger: AGAGGGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGG...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAAGCCTCCCGAGCAACTaGGATTACAGGTGTGCCCCA +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILSLPSN*DYRCAP
Trigger: TGGGGCACACCTGTAATCCCAGTTGCTCGGGAGGCT...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAAGTTCAGACTCAGCCTaGTGGCACAGGGTGCGCTTT +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILSSDSA*WHRVRF
Trigger: AAAGCGCACCCTGTGCCATCAGGCTGAGTCTGAACT...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAACTTGTGGGTTCTACTaGAGCTTGGACCCGCAGTCT +
Preference number: 2 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPITCGFY*SLDPQS
Trigger: AGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGT...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTACTGCCCAGGCTGGAGTaGAGTGGCATGATCTCAACT +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILLPRLE*SGMIST
Trigger: AGTTGAGATCATGCCACTGCACTCCAGCCTGGGCAG...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGCAGTGAGCCCTGATTaGACTACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILAVSPD*TTALQP
Trigger: AGGCTGGAGTGCAGTAGTGCAATCAGGGCTCACTGC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATATTGAGGTTAGTTACATaGCTGCCAAGGGGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPILRLVT*LPRGWG
Trigger: TCCCCACCCCCTTGGCAGCCATGTAACTAACCTCAA...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTATGGAGTGCAGTGGCATaGTCTCAACTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILWSAVA*SQLTAT
Trigger: GGTTGCAGTGAGTTGAGATCATGCCACTGCACTCCA...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR GCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCTAACATCACTGTATaGCCCAGGGGTGTCATTTAC +
Preference number: 2 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIPNITV*PRGVIY
Trigger: GTAAATGACACCCCTGGGGCATACAGTGATGTTAGG...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCTTTGTGACCCACTTGTaGGTTCTACTGCAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIFVTHL*VLLQLG
Trigger: TCCAAGCTGCAGTAGAACCCACAAGTGGGTCACAAA...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAGTGCACCGTCCTCTTTaGAAAAAGGGGGTAAGGAAC +
Preference number: 2 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIVHRPL*KKGVRN
Trigger: GTTCCTTACCCCCTTTTTCCAAAGAGGACGGTGCAC...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTACCTCTAGTGAACAAATaGGCCATAGTCTGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILPLVNK*AIVWRA
Trigger: AGCCCTCCAGACTATGGCTCATTTGTTCACTAGAGG...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCATAGCAAACCTCCCCTaGCCACCTGACTACATATTT +
Preference number: 2 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIIANLP*PPDYIF
Trigger: AAATATGTAGTCAGGTGGCCAGGGGAGGTTTGCTAT...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGTTATGGTAAAATTGTaGGTGCACCGTCCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIVMVKL*VHRPLW
Trigger: CCAAAGAGGACGGTGCACCCACAATTTTACCATAAC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATACCTGCCAACATCTCATaGAATCTGGTAGTAAACTGG +
Preference number: 2 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIPANIS*NLVVNW
Trigger: CCAGTTTACTACCAGATTTCATGAGATGTTGGCAGG...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR TCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATACTGTGTTTGTGGTGGTaGCCCACTAAATTGATTTTG +
Preference number: 2 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPILCLWW*PTKLIL
Trigger: CAAAATCAATTTAGTGGGTCACCACCACAAACACAG...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAAGAAGGCAGCTCAGCTaGTACAGTAGAAAGCCTATT +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILRRQLS*YSRKPI
Trigger: AATAGGCTTTCTACTGTACCAGCTGAGCTGCCTTCT...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAAATCTGGTAGTAAACTaGCAAGAGTTCCCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: TRRAASMRWLHSSIMRILNLVVN*QEFPLH
Trigger: GTGCAGAGGGAACTCTTGCCAGTTTACTACCAGATT...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR GCA 72 bp TGGAGGGCTGGCATGGTAACCAGAATGGGTGGATGCTaGCAGGAGAGGCCAGGGCCCCTGAGGATTCGGGGG +
Preference number: 3 (lower is better)
Translates to: WRAGMVTRMGGC*QERPGPLRIRG
Trigger: CCCCCGAATCCTCAGGGGCCCTGGCCTCTCCTGGCAGCATCCACCCATTCTGGTTACCATGCCAGCCCTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 72 bp AGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTaGCTGTGCTCCTGTACTGCCCCCACACAAGGCCCT +
Preference number: 3 (lower is better)
Translates to: RAQAAEHQASAF*LCSCTAPTQGP
Trigger: AGGGCCTTGTGTGGGGGCAGTACAGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR TCA 72 bp GCTCCCGGCTTCTCAGACACAGCTTTGCTGTGTGCATaGCCCCTGCATCCGACCCTGGCATGGGATCCTGGC +
Preference number: 3 (lower is better)
Translates to: APGFSDTALLCA*PLHPTLAWDPG
Trigger: GCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGCCGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR GCA 72 bp CCAGGCTCCCGGCTTCTCAGACACAGCTTTGCTGTGTaGATGACCCCTGCATCCGACCCTGGCATGGGATCC +
Preference number: 3 (lower is better)
Translates to: PGSRLLRHSFAV*MTPASDPGMGS
Trigger: GGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGCCGGGAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR CCA 72 bp GTGTGGTGGGGGTATGTGTGTGAAGGCCCCAGAAGGTaGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: VWWGYVCEGPRR*PWDKALLPLVP
Trigger: GGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCCTTCACACACATACCCCCACCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR GCA 72 bp TACCCCAAACCCCCTTCCAGAGGCCTCTGGGAAGGCTaGCTCAGGGCAAACCCAAGATGGCAACAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: YPKPPSRGLWEG*LRANPRWQQPL
Trigger: CAGAGGCTGTTGCCATCTTGGGTTTGCCCTGAGGCAGCCTTCCCAGAGGCCTCTGGAAGGGGGTTTGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR GCA 72 bp GCTTCTCAGACACAGCTTTGCTGTGTGCATGACCCCTaGATCCGACCCTGGCATGGGATCCTGGCTCCCATG +
Preference number: 3 (lower is better)
Translates to: ASQTQLCCVHDP*IRPWHGILAPM
Trigger: CATGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR-3UTR CAA 90 bp AAGAGCTGGCTAGAAGGCTGGCATCCCCCAGGGTGCTGGGATAAAATTCTTAACGCTGGAGGGCAGAACTaGGGCAAGAGCCCAGGCCGC +
Preference number: 3 (lower is better)
Translates to: KSWLEGWHPPGCWDKILNAGGQN*GKSPGR
Trigger: GCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGC...GTTAAGAATTTTATCCCAGCACCCTGGGGGATGCCAGCCTTCTAGCCAGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR TCA 72 bp GTGTGTGTGTGTGTTTGTGTGGTGGGGGTATGTGTGTaGAGGCCCCAGAAGGTGGCCCTGGGACAAAGCGCT +
Preference number: 3 (lower is better)
Translates to: VCVCVCVVGVCV*RPQKVALGQSA
Trigger: AGCGCTTTGTCCCAGGGCCACCTTCTGGGGCCTTCACACACATACCCCCACCACACAAACACACACACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR GCA 72 bp GAAATGGGCAAGCAGCCTGTGTCCTTGGGAACTGCCTaGTGCACATCCAGCAAAGGGAGGTCCTTGCCATGG +
Preference number: 3 (lower is better)
Translates to: EMGKQPVSLGTA*CTSSKGRSLPW
Trigger: CCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCTGCTTGCCCATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR GCA 72 bp TTTGTGTCCAGGCTCCCGGCTTCTCAGACACAGCTTTaGTGTGTGCATGACCCCTGCATCCGACCCTGGCAT +
Preference number: 3 (lower is better)
Translates to: FVSRLPASQTQL*CVHDPCIRPWH
Trigger: ATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGCCGGGAGCCTGGACACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR CCA 72 bp CTACAGTTCTACCCCAAACCCCCTTCCAGAGGCCTCTaGGAAGGCTGCCTCAGGGCAAACCCAAGATGGCAA +
Preference number: 3 (lower is better)
Translates to: LQFYPKPPSRGL*EGCLRANPRWQ
Trigger: TTGCCATCTTGGGTTTGCCCTGAGGCAGCCTTCCCAGAGGCCTCTGGAAGGGGGTTTGGGGTAGAACTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp GGTGGGAGCCATTGCCCTGCAGTCTTGGAGCACTTCTaGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCG +
Preference number: 3 (lower is better)
Translates to: GGSHCPAVLEHF*WWRWSGSRAKS
Trigger: CGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGGCTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
3UTR GCA 72 bp GAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTaGCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGA +
Preference number: 3 (lower is better)
Translates to: ELPAAHPAKGGP*HGLTASPGKGG
Trigger: TCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGGTaGGGGTATGTGTGTGAAGGCCCCAGAAGGTGGCCC +
Preference number: 3 (lower is better)
Translates to: VCVCVCVCVFVW*GYVCEGPRRWP
Trigger: GGGCCACCTTCTGGGGCCTTCACACACATACCCCCACCACACAAACACACACACACACACACACACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 72 bp CCTGCATCCGACCCTGGCATGGGATCCTGGCTCCCATaGAATCACCGGCCAGGATGTCAGTTCTACAATAAC +
Preference number: 3 (lower is better)
Translates to: PASDPGMGSWLP*NHRPGCQFYNN
Trigger: GTTATTGTAGAACTGACATCCTGGCCGGTGATTTCATGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR GCA 72 bp TGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTaGACATGGAAAATCATTCCCTCCACGGAAGTGGGT +
Preference number: 3 (lower is better)
Translates to: CGFYCSLDPQSP*TWKIIPSTEVG
Trigger: ACCCACTTCCGTGGAGGGAATGATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp TTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATaGAAAATCATTCCCTCCACGGAAGTGGGTGGACCT +
Preference number: 3 (lower is better)
Translates to: FYCSLDPQSPCT*KIIPSTEVGGP
Trigger: AGGTCCACCCACTTCCGTGGAGGGAATGATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp GCTGCCTCAGGGCAAACCCAAGATGGCAACAGCCTCTaGTTTGATCAGTCGAGGAGAGCTCTGCTGCATGTT +
Preference number: 3 (lower is better)
Translates to: AASGQTQDGNSL*FDQSRRALLHV
Trigger: AACATGCAGCAGAGCTCTCCTCGACTGATCAAACCAGAGGCTGTTGCCATCTTGGGTTTGCCCTGAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp CCCTCTAGTGAACAAATGAGCCATAGTCTGGAGGGCTaGCATGGTAACCAGAATGGGTGGATGCTGCCAGGA +
Preference number: 3 (lower is better)
Translates to: PSSEQMSHSLEG*HGNQNGWMLPG
Trigger: TCCTGGCAGCATCCACCCATTCTGGTTACCATGCCAGCCCTCCAGACTATGGCTCATTTGTTCACTAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 72 bp CTCAGGGCAAACCCAAGATGGCAACAGCCTCTGGTTTaGTCAGTCGAGGAGAGCTCTGCTGCATGTTTGAAC +
Preference number: 3 (lower is better)
Translates to: LRANPRWQQPLV*SVEESSAACLN
Trigger: GTTCAAACATGCAGCAGAGCTCTCCTCGACTGATCAAACCAGAGGCTGTTGCCATCTTGGGTTTGCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 72 bp CAAACTGCCAAGCTACCAAGCCCTCTAGTGAACAAATaGGCCATAGTCTGGAGGGCTGGCATGGTAACCAGA +
Preference number: 3 (lower is better)
Translates to: QTAKLPSPLVNK*AIVWRAGMVTR
Trigger: TCTGGTTACCATGCCAGCCCTCCAGACTATGGCTCATTTGTTCACTAGAGGGCTTGGTAGCTTGGCAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp CCCACATTGAGGTTAGTTACATGGCTGCCAAGGGGGTaGGGACACAGGATAGGTAACAAGAGTTCAGACTCA +
Preference number: 3 (lower is better)
Translates to: PTLRLVTWLPRG*GHRIGNKSSDS
Trigger: TGAGTCTGAACTCTTGTTACCTATCCTGTGTCCCCACCCCCTTGGCAGCCATGTAACTAACCTCAATGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp CCCCCAGGGTGCTGGGATAAAATTCTTAACTCTTCATaGATAGCAGTGACCAAAGTCCATAGGGTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: PPGCWDKILNSS*IAVTKVHRVEG
Trigger: CCCCTCCACCCTATGGACTTTGGTCACTGCTATCCATGAAGAGTTAAGAATTTTATCCCAGCACCCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR TCA 72 bp CCAGTCCACTGTGTTTGTGGTGGTGACCCACTAAATTaGTTTTGTGACCCACTTGTGGGTTCTACTGCAGCT +
Preference number: 3 (lower is better)
Translates to: PVHCVCGGDPLN*FCDPLVGSTAA
Trigger: AGCTGCAGTAGAACCCACAAGTGGGTCACAAAATCAATTTAGTGGGTCACCACCACAAACACAGTGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CAA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGCTGAGGCACAAGGATaGCTTGAGCCTGGGAAGTCA +
Preference number: 3 (lower is better)
Translates to: TRRAASMRWLHSSIMRILAEAQG*LEPGKS
Trigger: TGACTTCCCAGGCTCAAGCAATCCTTGTGCCTCAGC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp AGAAGAAGAAGAAGAAGTAAAAGAAGGCAGCTCAGCTaGTACAGTAGAAAGCCTATTCTGGAAACTGCCATG +
Preference number: 3 (lower is better)
Translates to: RRRRRSKRRQLS*YSRKPILETAM
Trigger: CATGGCAGTTTCCAGAATAGGCTTTCTACTGTACCAGCTGAGCTGCCTTCTTTTACTTCTTCTTCTTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CAA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGATTTTGTGACCCACTaGTGGGTTCTACTGCAGCTT +
Preference number: 3 (lower is better)
Translates to: TRRAASMRWLHSSIMRILDFVTH*WVLLQL
Trigger: AAGCTGCAGTAGAACCCACAAGTGGGTCACAAAATC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CAA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAAACCCACCTGTAGATTaGAGAGCAAAAGTCCTGACT +
Preference number: 3 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPINPPVD*RAKVLT
Trigger: AGTCAGGACTTTTGCTCTCAAATCTACAGGTGGGTT...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR-3UTR CAA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCTATGTTATGGTAAAATaGTGGGTGCACCGTCCTCTT +
Preference number: 3 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIYVMVK*WVHRPL
Trigger: AAGAGGACGGTGCACCCACAATTTTACCATAACATA...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR TCA 72 bp GCTGGTACAGTAGAAAGCCTATTCTGGAAACTGCCATaGTGGATGGCTAATAAAATATTGGAGATACTTAAC +
Preference number: 3 (lower is better)
Translates to: AGTVESLFWKLP*WMANKILEILN
Trigger: GTTAAGTATCTCCAATATTTTATTAGCCATCCATCATGGCAGTTTCCAGAATAGGCTTTCTACTGTACCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp TCTGGAAACTGCCATGATGGATGGCTAATAAAATATTaGAGATACTTAACCCTTAGCCAAACAGTATGTGTC +
Preference number: 3 (lower is better)
Translates to: SGNCHDGWLIKY*RYLTLSQTVCV
Trigger: GACACATACTGTTTGGCTAAGGGTTAAGTATCTCCAATATTTTATTAGCCATCCATCATGGCAGTTTCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CCA 72 bp CATATTATGAGGAAAATCCAACTTATTTACAAAGAATaGGTCATCTTCAGGCCTGAGATCCCAATATGTTAT +
Preference number: 3 (lower is better)
Translates to: HIMRKIQLIYKE*VIFRPEIPICY
Trigger: ATAACATATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCATAATATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCTCGGCCACCGCCAGTTaGGCGTGGTGCGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSSATAS*AWCGLS
Trigger: GGAGAGGCCGCACCACGCGCAACTGGCGGTGGCCGA...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GCTCCTGTACTGCCCCCACACAAGGCCCTGAACAGGGCCTGCGAAGCACTGGGCACCAGGCGCTTGCCGTaGACCTTGCGGGACGGCGTG +
Preference number: 4 (lower is better)
Translates to: APVLPPHKALNRACEALGTRRLP*TLRDGV
Trigger: CACGCCGTCCCGCAAGGTGCACGGCAAGCGCCTGGT...GCCCAGTGCTTCGCAGGCCCTGTTCAGGGCCTTGTGTGGGGGCAGTACAGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGACCGCCAGTTGCGCGTaGTGCGGCCTCTCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGETASCA*CGLSGW
Trigger: CCACCCGGAGAGGCCGCACCACGCGCAACTGGCGGT...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCCTCCACGGAAGTGGGTaGACCTCCCCGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSLHGSG*TSPQQA
Trigger: GGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAG...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGCCCACACCTGGAGGCTaGGCTGCCCTTGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGEPTPGG*AALAGG
Trigger: CCCACCCGCAAGGGCAGCCCAGCCTCCAGGTGTGGG...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCAGGCCCCGGCCTCAGTaGGGATCACCAAGTGCCACC +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSRPRPQ*GSPSAT
Trigger: GGTGGCACTTGGTGATCCTCACTGAGGCCGGGGCCT...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGTTCCCTCCACGGAAGTaGGTGGACCTCCCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQFPPRK*VDLPAA
Trigger: TGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAA...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGGAAAAGGGGGCACCATaGTGGGCCCACTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQEKGAP*WAHSGP
Trigger: TGGACCTGAGTGGGCCCATCATGGTGCCCCCTTTTC...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGCAGAACTGCGGCTGCTaGGACTGGCCACAACCTCAG +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQQNCGC*DWPQPQ
Trigger: CTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTG...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGGGCTGGGCCATTCCCTaGAAGTGCGTGTTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQGWAIP*KCVLVP
Trigger: AGGGACCAACACGCACTTGCAGGGAATGGCCCAGCC...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACTGTGCTCCTGCCCTGAACAGGGCCTaGGAAGCACTGGGCCCTACC +
Preference number: 4 (lower is better)
Translates to: GQEPRPLSTRPALFDCAPALNRA*EALGPT
Trigger: GGTAGGGCCCAGTGCTTCGCAGGCCCTGTTCAGGGC...AGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCGCCGGGCCCCTGTCTTaGCGCGGAGCTCGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCAGPLS*RGARRP
Trigger: TGGCCGACGAGCTCCGCGCCAAGACAGGGGCCCGGC...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGCCCAGAAGGTGGCCCTaGGACAAAGCGCTCCTACCA +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQPRRWP*DKALLP
Trigger: TGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGG...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp TGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCACCTGCAGCACGTCGTTaGCCAGGGCGCCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: CPAVLEHFWWWRWSGSRAPAARR*PGRPRP
Trigger: TGGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGG...TGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATATGCTGGGGTGCTCCATaGTGTGCCCAGCGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GPRRWPWDKALLPLVPSICWGAP*CAQRPL
Trigger: CAGTGGCCGCTGGGCACAGCATGGAGCACCCCAGCA...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCACCAGGCGCTTGCCGTaGACCTTGCGGGACGGCGTG +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQATRRLP*TLRDGV
Trigger: CACGCCGTCCCGCAAGGTGCACGGCAAGCGCCTGGT...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCCCCGAGGCACTAGCCTaGGTGCAGCCGGGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLPEALA*VQPGAP
Trigger: TGGAGCACCCGGCTGCACCCAGGCTAGTGCCTCGGG...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGACAATGCTGCCAGGATaGCTCTGGGGGCTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQTMLPG*LWGLRL
Trigger: AAGCCGAAGCCCCCAGAGCCATCCTGGCAGCATTGT...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGAGCCTCCCGAGCAACTaGGATTACAGGTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQSLPSN*DYRCAP
Trigger: TGGGGCACACCTGTAATCCCAGTTGCTCGGGAGGCT...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCATGTTCTCCCGTCAGTaGGGCCAGGCCCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAMFSRQ*GQAPRC
Trigger: GCACCTGGGGGCCTGGCCTCACTGACGGGAGAACAT...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCGGAGGGCAGCTGGCGTaGGCCAAGCAGCCACTAGGA +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAGGQLA*AKQPLG
Trigger: TCCTAGTGGCTGCTTGGCGCACGCCAGCTGCCCTCC...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp TGCTGTGTGCATGACCCCTGCATCCGACCCTGGCATGGGATCCTGGCTCCCATGGCTTGCCGTGCACCTTaGGGGACGGCGTGTACACCA +
Preference number: 4 (lower is better)
Translates to: CCVHDPCIRPWHGILAPMACRAP*GTACTP
Trigger: TGGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGC...CATGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR GCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGCTGCCCAGGCTGGAGTaGAGTGGCATGATCTCAACT +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQLPRLE*SGMIST
Trigger: AGTTGAGATCATGCCACTGCACTCCAGCCTGGGCAG...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGTGCCCAGCGGCCACTaGCGCAGGTCCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QSWSTSGGGDGVEVGQNRVPSGH*RRSCPR
Trigger: CCTGGGGCAGGACCTGCGCCAGTGGCCGCTGGGCAC...CCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCCCTGCAAGTGCGTGTTaGTCCCTTAGGGCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSPASAC*SLRACP
Trigger: TGGGCAAGCCCTAAGGGACCAACACGCACTTGCAGG...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACGGGCCTGCGAAGCACTaGGCCCTACCCACCATAAGG +
Preference number: 4 (lower is better)
Translates to: AELGQEPRPLSTRPALFDGPAKH*ALPTIR
Trigger: CCTTATGGTGGGTAGGGCCCAGTGCTTCGCAGGCCC...GTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp CTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGACTGAGACCCGCAGCTaGGTTTGTGTCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LQVAQLEGRTWARAQAAETETRS*VCVQAP
Trigger: GGGAGCCTGGACACAAACCCAGCTGCGGGTCTCAGT...CTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp GCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACAGCTGGCTAGAAGGCTaGCATCCCCCAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AELGQEPRPLSTRPALFDSWLEG*HPPGCW
Trigger: CCAGCACCCTGGGGGATGCCAGCCTTCTAGCCAGCT...GTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR TCA 90 bp CCGCTGAGCACCAGGCCAGCGCTTTTTGACTGTGCTCCTGTACTGCCCCCACACGCAGCCTCTGCTCGATaGACCACTTCCACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: PLSTRPALFDCAPVLPPHAASAR*TTSTRG
Trigger: ACCCCGAGTGGAAGTGGTTCATCGAGCAGAGGCTGC...GTGTGGGGGCAGTACAGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR TCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGTCTGTACCAGGAGGATaGGCCTGGCGAGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGESVPGG*AWRGLR
Trigger: TCTCAGACCTCGCCAGGCTCATCCTCCTGGTACAGA...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCAGCCTGGGTGACAGATaGCAGAGCGGAACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLSLGDR*QSGTLP
Trigger: GGGCAGGGTTCCGCTCTGTCATCTGTCACCCAGGCT...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CTTTTTGACTGTGCTCCTGTACTGCCCCCACACAAGGCCCTGAACAGGGCCTGCAAGAGCCCAGGCCGCTaGGCACCAGGCCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LFDCAPVLPPHKALNRACKSPGR*APGQRF
Trigger: AAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTT...GCAGGCCCTGTTCAGGGCCTTGTGTGGGGGCAGTACAGGAGCACAGTCAAAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR TCA 90 bp GGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACTGTGCTCCTGGATCCTGGCTCCCATaGAATCACCGGCCAGGATGT +
Preference number: 4 (lower is better)
Translates to: GQEPRPLSTRPALFDCAPGSWLP*NHRPGC
Trigger: ACATCCTGGCCGGTGATTTCATGGGAGCCAGGATCC...AGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR TCA 90 bp GAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACTGTGCTCCTGTACTGGCTTTGCTGTGTGCATaGCCCCTGCATCCGACCCTG +
Preference number: 4 (lower is better)
Translates to: EPRPLSTRPALFDCAPVLALLCA*PLHPTL
Trigger: CAGGGTCGGATGCAGGGGTCATGCACACAGCAAAGC...CAGTACAGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR GCA 90 bp TCCAGGCTCCCGGCTTCTCAGACACAGCTTTGCTGTGTGCATGACCCCTGCATCAGCAGACCAGGCGCTTaGCGTGCACCTTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: SRLPASQTQLCCVHDPCISRPGA*RAPCGT
Trigger: CGTCCCGCAAGGTGCACGGCAAGCGCCTGGTCTGCT...GATGCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGAAGCCGGGAGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR GCA 90 bp CTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGTCCTGCTCAGGAAGTTaGTCAGGGAGGGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: LQVAQLEGRTWARAQAAESCSGS*SGRVHG
Trigger: GCCATGGACCCTCCCTGAGCAACTTCCTGAGCAGGA...CTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR GCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATAACCAGAATGGGTGGATaGTGCCAGGAGAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPRRWPWDKALLPLVPSITRMGG*CQERPG
Trigger: CCCTGGCCTCTCCTGGCAGCATCCACCCATTCTGGT...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACTGTGCTCCTGTACTGTGTGTGCATGACCCCTaGATCCGACCCTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: EPRPLSTRPALFDCAPVLCVHDP*IRPWHG
Trigger: CCCATGCCAGGGTCGGATGCAGGGGTCATGCACACA...CAGTACAGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATGTGCCCAGCGGCCACTaGCGCAGGTCCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENVPSGH*RRSCPR
Trigger: CCTGGGGCAGGACCTGCGCCAGTGGCCGCTGGGCAC...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATTGTTCGCCCCGCGGCTaGAGCTGCAGGCCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHCSPRG*SCRPGG
Trigger: TCCGCCCGGCCTGCAGCTCCAGCCGCGGGGCGAACA...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCAGGAGAGCCCACACCTaGAGGCTGGGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCRRAHT*RLGCPC
Trigger: GCAAGGGCAGCCCAGCCTCCAGGTGTGGGCTCTCCT...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGGAAGTTTGTGGGGCTaGGGGCTGGTCTTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGEGSLWG*GLVFSG
Trigger: ACCAGAGAAGACCAGCCCCCAGCCCCACAAACTTCC...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATAGGGAGGTCCTTGCCATaGCCTCACTGCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPRRWPWDKALLPLVPSIGRSLP*PHCFSW
Trigger: CCAGGAGAAGCAGTGAGGCCATGGCAAGGACCTCCC...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGCATCCGACCCTGGCATaGGATCCTGGCTCCCATGAA +
Preference number: 4 (lower is better)
Translates to: LQVAQLEGRTWARAQAAEHPTLA*DPGSHE
Trigger: TTCATGGGAGCCAGGATCCCATGCCAGGGTCGGATG...CTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR TCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATCCTGCAGCACGTCGTTaGCCAGGGCGCCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHPAARR*PGRPRP
Trigger: TGGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGG...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGAGTCAACAGCCAGCTTaGTTCCCCGGCAAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGESQQPA*FPGKRR
Trigger: CCTTCTCTTGCCGGGGAATCAAGCTGGCTGTTGACT...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATGAGCCTGGCGAGGTCTaGGAGCTCCGGGAACGCGGC +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHEPGEV*ELRERG
Trigger: GCCGCGTTCCCGGAGCTCTCAGACCTCGCCAGGCTC...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCGCACTCCAGCCTGGGTaGCAGATGACAGAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLALQPG*QMTERN
Trigger: GTTCCGCTCTGTCATCTGTCACCCAGGCTGGAGTGC...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGAGCTGCAGTGAGCCCTaGTTGCACTACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGESCSEP*LHYCTP
Trigger: TGGAGTGCAGTAGTGCAATCAGGGCTCACTGCAGCT...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGCTACTCCTCAACCCCTaGCATTCTACAGTTCTACCC +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQLLLNP*HSTVLP
Trigger: GGGTAGAACTGTAGAATGTCAGGGGTTGAGGAGTAG...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp GCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACCAGGCCAGCGCTTTTTaGCTGTGCTCCTGTACTGCC +
Preference number: 4 (lower is better)
Translates to: AELGQEPRPLSTRPALFDQASAF*LCSCTA
Trigger: GGCAGTACAGGAGCACAGTCAAAAAGCGCTGGCCTG...GTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR GCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCAGCTCCGCCAGCACGTaGTGCTCTCTGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQASSAST*CSLIGV
Trigger: CACCCCTATCAGAGAGCAGCACGTGCTGGCGGAGCT...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATGCCGGCGGGAGGCTGTaGGCAAATGGTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHAGGRL*ANGSRG
Trigger: CCCCCGGGAACCATTTGCGCACAGCCTCCCGCCGGC...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCAGGCATGAGCCACCATaGCGGGCCGAGACTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQARHEPP*RAETLS
Trigger: AGACAGAGTCTCGGCCCGGCATGGTGGCTCATGCCT...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGCAGTCTCCGTGCACATaGAAAATCATTCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQQSPCT*KIIPST
Trigger: CGTGGAGGGAATGATTTTCCATGTGCACGGAGACTG...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCGGGGCTGGTCTTCTCTaGTCTTCCCCTGGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAGAGLL*SSPGKC
Trigger: GCACTTCCCAGGGGAAGACCAGAGAAGACCAGCCCC...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCTGTGGGGCTGGGGGCTaGTCTTCTCTGGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCCGAGG*SSLVFP
Trigger: GGGGAAGACCAGAGAAGACCAGCCCCCAGCCCCACA...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGGATGGCAACAGCCTCTaGTTTGATCAGTCGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQDGNSL*FDQSRR
Trigger: TCTCCTCGACTGATCAAACCAGAGGCTGTTGCCATC...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp GTTAACTCTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCTGTCGTTGGAGACGATaGCGCCGTCCTGCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: VNSPGSTAGGQNLGKSPGCRWRR*RRPARR
Trigger: CCTACGAGCAGGACGGCGTCATCGTCTCCAACGACA...GCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAGAGTTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR TCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATAAGTTCAGACTCAGCCTaGTGGCACAGGGTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: GPRRWPWDKALLPLVPSISSDSA*WHRVRF
Trigger: AAAGCGCACCCTGTGCCATCAGGCTGAGTCTGAACT...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGCAACAGCCTCTGGTTTaGTCAGTCGAGGAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGEQQPLV*SVEESS
Trigger: AGAGCTCTCCTCGACTGATCAAACCAGAGGCTGTTG...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAACACTGGCGCAGGTCCTaGCCCAGGCTTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PAVLEHFWWWRWSGSRAKHWRRS*PRLPPL
Trigger: GAGAGGAGGAAGCCTGGGGCAGGACCTGCGCCAGTG...TTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCGGGTGCTCCATGCTGTaGCCAGCGGCCACTGGCGCA +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFGCSML*PAATGA
Trigger: TGCGCCAGTGGCCGCTGGGCACAGCATGGAGCACCC...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATGTGCTGGGGTGCTCCATaGTGTGCCCAGCGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LGALLVVEMEWKSGKIGMCWGAP*CAQRPL
Trigger: CAGTGGCCGCTGGGCACAGCATGGAGCACCCCAGCA...CATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCTCATCGCCACGTTGCTaGCATCAATCACTATGGGTC +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSSSPRC*HQSLWV
Trigger: GACCCATAGTGATTGATGGCAGCAACGTGGCGATGA...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATAGGTCTTCACAATGAATaGTGGCCCAGTCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPRRWPWDKALLPLVPSIGLHNE*WPSRQQ
Trigger: CTGCTGGCGACTGGGCCAGCATTCATTGTGAAGACC...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCGAAAGCAAGTCGCCGTaGAGGTCCCTAGGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCESKSP*RSLGRC
Trigger: ACACCGCCCTAGGGACCTGCACGGCGACTTGCTTTC...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTCGCTGTAGAGCGCGATaGGAGCCCGGGCGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVRCRAR*EPGRAR
Trigger: ACGCGCGCGCCCGGGCTCGCATCGCGCTCTACAGCG...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATAGCAGTGAGCCCTGATTaGACTACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GPRRWPWDKALLPLVPSIAVSPD*TTALQP
Trigger: AGGCTGGAGTGCAGTAGTGCAATCAGGGCTCACTGC...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCTGCCATCAATCACTATaGGTCGCAGAGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSCHQSL*VAENWP
Trigger: TGGCCAGTTCTCTGCGACCCATAGTGATTGATGGCA...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATACTTCACAATGAATGCTaGCCCAGTCGCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GPRRWPWDKALLPLVPSILHNEC*PSRQQP
Trigger: AGGCTGCTGGCGACTGGGCCAGCATTCATTGTGAAG...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCTCGCCCGGGGAGAACTaGCTCTCCGGGCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFSPGEN*LSGLGR
Trigger: CCTCCCTAGCCCGGAGAGCCAGTTCTCCCCGGGCGA...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCCCACGGGTCGTCGGGTaGCCTGCGCGGGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFPRVVG*PARGKQ
Trigger: TTGCTTTCCCCGCGCAGGCCACCCGACGACCCGTGG...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCTCTCTGGTCTTCCCCTaGGAAGTGCCTCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQASLVFP*EVPPAF
Trigger: GAAAGCGGGAGGCACTTCCCAGGGGAAGACCAGAGA...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGAGAGCCCTGCAGACATaGGCTCTGCCAGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: IALQSWSTSGGGDGVEVGRALQT*ALPAPQ
Trigger: CTGTGGAGCTGGCAGAGCTCATGTCTGCAGGGCTCT...CCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR TCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCGGCTGCAGTGAGCTATaGTCACACTACTATACTCCA +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSGCSEL*SHYYTP
Trigger: TGGAGTATAGTAGTGTGATCATAGCTCACTGCAGCC...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCCACTGGCGCAGGTCCTaGCCCAGGCTTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFHWRRS*PRLPPL
Trigger: GAGAGGAGGAAGCCTGGGGCAGGACCTGCGCCAGTG...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATAGCAGACCAGGCGCTTaGCGTGCACCTTGCGGGACG +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENSRPGA*RAPCGT
Trigger: CGTCCCGCAAGGTGCACGGCAAGCGCCTGGTCTGCT...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCTCTGCACCAGCAGGCTaGAGGAAGTTTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCSAPAG*RKFVGL
Trigger: CAGCCCCACAAACTTCCTGCAGCCTGCTGGTGCAGA...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCCCTAACATCACTGTATaGCCCAGGGGTGTCATTTAC +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSPNITV*PRGVIY
Trigger: GTAAATGACACCCCTGGGGCATACAGTGATGTTAGG...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GTTAACTCTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCACAATGCTGCCAGGATaGCTCTGGGGGCTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: VNSPGSTAGGQNLGKSPGTMLPG*LWGLRL
Trigger: AAGCCGAAGCCCCCAGAGCCATCCTGGCAGCATTGT...GCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAGAGTTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCTGGCTGCCAAGGGGGTaGGGACACAGGATAGGTAAC +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCWLPRG*GHRIGN
Trigger: GTTACCTATCCTGTGTCCCCACCCCCTTGGCAGCCA...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGGTTATGGTAAAATTGTaGGTGCACCGTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQVMVKL*VHRPLW
Trigger: CCAAAGAGGACGGTGCACCCACAATTTTACCATAAC...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp TGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCATGGGAGCCATTGCCCTaGAGTCTTGGAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: CPAVLEHFWWWRWSGSRAWEPLP*SLGALL
Trigger: CAGAAGTGCTCCAAGACTGCAGGGCAATGGCTCCCA...TGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTGGCCAGGCCCCCAGGTaGCACTGGAGTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVGQAPR*HWSQRR
Trigger: CCTCCTCTGACTCCAGTGGCACCTGGGGGCCTGGCC...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATGCTTGCCGTGCACCTTaGGGGACGGCGTGTACACCA +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENACRAP*GTACTP
Trigger: TGGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGC...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCGACCCGCAGTCTCCGTaGACATGGAAAATCATTCCC +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLDPQSP*TWKIIP
Trigger: GGGAATGATTTTCCATGTGCACGGAGACTGCGGGTC...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCGCAAAGGGAGGTCCTTaGCATGGCCTCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCAKGGP*HGLTAS
Trigger: AGAAGCAGTGAGGCCATGGCAAGGACCTCCCTTTGC...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCTGTGTCCTTGGGAACTaGCTGCTGCACATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQACVLGN*LLHIQQ
Trigger: TTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACA...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GGAGCCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGGTGTCAGCTCTTGGTaGGTCCTTCCTCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GAIALQSWSTSGGGDGVEGVSSW*VLPPGW
Trigger: CCATCCTGGAGGAAGGACCCACCAAGAGCTGACACC...TTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp CCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGAGGGGTGTCAGCTCTTaGTGGGTCCTTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLPCSLGALLVVEMEWKSRGVSS*WVLPPG
Trigger: TCCTGGAGGAAGGACCCACCAAGAGCTGACACCCCT...CGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp TTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCGTGGTGGAGATGGAGTaGAAGTCGGGCAAAATCGGG +
Preference number: 4 (lower is better)
Translates to: LPCSLGALLVVEMEWKSGVVEME*KSGKIG
Trigger: CCCGATTTTGCCCGACTTCCACTCCATCTCCACCAC...GCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATCACTCAGGTCCAGGCTaGCAACCACAGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENHSGPG*QPQVHP
Trigger: CGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
3UTR CAA 72 bp GGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTaGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTACCTSSKGRS*PWPHCFSWKRW
Trigger: CCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp GAGCCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGCGGGCAAAATCGGGATaGCTAACAGGTGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EPLPCSLGALLVVEMEWKRAKSG*LTGELS
Trigger: GCTCAGCTCACCTGTTAGTCATCCCGATTTTGCCCG...CTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR TCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTCTCGGTCGCGTACACTaGAAGTCCCCCAGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVLGRVH*KSPSGA
Trigger: GGCGCCACTGGGGGACTTTCAGTGTACGCGACCGAG...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCGCAATAAACTCTGACTaGGCTCATGTCAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSAINSD*AHVSFL
Trigger: GAGAAAACTGACATGAGCTCAGTCAGAGTTTATTGC...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATGGCAGGAGAATGGCATaGACCTGGGAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENGRRMA*TWEAVE
Trigger: CTCCACTGCCTCCCAGGTTCATGCCATTCTCCTGCC...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAACTCCTCTCAGAGCCCTaGAGACATGAGCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PAVLEHFWWWRWSGSRAKLLSEP*RHELCQ
Trigger: CTGGCAGAGCTCATGTCTGCAGGGCTCTGAGAGGAG...TTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATTCCATCTTGCTGGGGTaGTCCATGCTGTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHSILLG*SMLCPA
Trigger: CGCTGGGCACAGCATGGAGCACCCCAGCAAGATGGA...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATTCCATCTTGCTGGGGTaGTCCATGCTGTGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LQSWSTSGGGDGVEVGQNSILLG*SMLCPA
Trigger: CGCTGGGCACAGCATGGAGCACCCCAGCAAGATGGA...ATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp AGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGGTGCGGATAAGCTCCTaGAGCACGTCGTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SLGALLVVEMEWKSGKIGVRISS*STSLTR
Trigger: CCTGGTCAACGACGTGCTGCAGGAGCTTATCCGCAC...CCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATGTGAGGATCACCAAGTaGCACCAGGCCCCCACAACC +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENVRITK*HQAPTT
Trigger: GGTTGTGGGGGCCTGGTGGCACTTGGTGATCCTCAC...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATGCACAGGGTGCGCTTTaGCCTGTCCCAGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENAQGAL*PVPVHC
Trigger: ACAGTGGACTGGGACAGGGCAAAGCGCACCCTGTGC...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATCCTGATGGCACAGGGTaGGCTTTGCCCTGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHPDGTG*ALPCPS
Trigger: ACTGGGACAGGGCAAAGCGCACCCTGTGCCATCAGG...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTGACAGAGCGGAACCCTaGCCCCTCCTCCCCCACCAA +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVDRAEP*PLLPHQ
Trigger: TTGGTGGGGGAGGAGGGGGCAGGGTTCCGCTCTGTC...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCTCGCTCAGGCTGGAGTaGAGAGCGCAGTGGCACAGT +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFSLRLE*RAQWHS
Trigger: ACTGTGCCACTGCGCTCTGCACTCCAGCCTGAGCGA...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCGGCCTCTGGGAAGGCTaGCTCAGGGCAAACCCAAGA +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFGLWEG*LRANPR
Trigger: TCTTGGGTTTGCCCTGAGGCAGCCTTCCCAGAGGCC...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CTTTTTGACTGTGCTCCTGTACTGCCCCCACACAAGGCCCTGAACAGGGCCTGCTCTCAGACACAGCTTTaGTGTGTGCATGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFDCAPVLPPHKALNRACSQTQL*CVHDPC
Trigger: GCAGGGGTCATGCACACAGCAAAGCTGTGTCTGAGA...GCAGGCCCTGTTCAGGGCCTTGTGTGGGGGCAGTACAGGAGCACAGTCAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCGTGCACCGTCCTCTTTaGAAAAAGGGGGTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLVHRPL*KKGVRN
Trigger: GTTCCTTACCCCCTTTTTCCAAAGAGGACGGTGCAC...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGCATCCCCCAGGGTGCTaGGATAAAATTCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: LQVAQLEGRTWARAQAAEHPPGC*DKILNS
Trigger: AGAGTTAAGAATTTTATCCCAGCACCCTGGGGGATG...CTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR TCA 90 bp GTGGGAGCCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGACTCAGCCACCATGGTaGGGAGAAAGTTGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VGAIALQSWSTSGGGDGVTQPPW*GESCLV
Trigger: GACAAGACAACTTTCTCCTCACCATGGTGGCTGAGT...CACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGGCTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR TCA 90 bp CTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATGAGTCAACAGCCAGCTTaGTTCCCCGGCAAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGALLVVEMEWKSGKIGMSQQPA*FPGKRR
Trigger: CCTTCTCTTGCCGGGGAATCAAGCTGGCTGTTGACT...CATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR TCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCCTTAGCCATTGCAAATaGGTAGGCCCTTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLLSHCK*VGPFSS
Trigger: TGAGGAGAAAGGGCCTACTCATTTGCAATGGCTAAG...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGAAATCAGCAACACAATaGTTCTACATCAGGAAATCG +
Preference number: 4 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQKSATQ*FYIRKS
Trigger: CGATTTCCTGATGTAGAATCATTGTGTTGCTGATTT...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp TGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCATGCAGACATGAGCTCTaGCAGCTCCACAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: CPAVLEHFWWWRWSGSRACRHEL*QLHRNP
Trigger: TGGATTTCTGTGGAGCTGGCAGAGCTCATGTCTGCA...TGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCCGAGGAGAGCTCTGCTaGATGTTTGAACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLRGELC*MFEQEE
Trigger: CTCTTCTTGTTCAAACATGCAGCAGAGCTCTCCTCG...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGCTGCTCCCAGGAGAATaGACCTCCACTCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLPCSLGALLVVEMEWKSLLPGE*TSTHFP
Trigger: TGGGAAATGAGTGGAGGTCCATTCTCCTGGGAGCAG...CGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp GTGGGAGCCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGTTCTGGTGGTGGAGATaGAGTGGAAGTCGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VGAIALQSWSTSGGGDGVFWWWR*SGSRAK
Trigger: TTTTGCCCGACTTCCACTCCATCTCCACCACCAGAA...CACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGGCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp GAGCCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGGTCTTGGAGCACTTCTaGTGGTGGAGATGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: EPLPCSLGALLVVEMEWKVLEHF*WWRWSG
Trigger: TCCACTCCATCTCCACCACCAGAAGTGCTCCAAGAC...CTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTATCACGCGGTCCACCTaGTCACGCGGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVITRST*SRGKTL
Trigger: CAGCGTCTTCCCGCGTGACCAGGTGGACCGCGTGAT...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGAATGCCAATTAGAGTaGCTTGTCTTGCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGEECQLE*LVLLLL
Trigger: GAGTAGAAGCAAGACAAGCCACTCTAATTGGCATTC...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCGGCAGGGGGATCACTTaGATCCAGGAGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFGRGIT*IQEFEA
Trigger: AGCCTCAAACTCCTGGATTCAAGTGATCCCCCTGCC...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GCCATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGAAGAATTCCATCTTaGTGGGGTGCTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: AIALQSWSTSGGGDGVEVGRIPS*WGAPCC
Trigger: ACAGCATGGAGCACCCCAGCAAGATGGAATTCTTCC...GACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR GCA 90 bp CTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATGGGCTCATCGCCACGTTaGTGCCATCAATCACTATGG +
Preference number: 4 (lower is better)
Translates to: LGALLVVEMEWKSGKIGMGSSPR*CHQSLW
Trigger: CCATAGTGATTGATGGCAGCAACGTGGCGATGAGCC...CATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCAATCTGGTAGTAAACTaGCAAGAGTTCCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLNLVVN*QEFPLH
Trigger: GTGCAGAGGGAACTCTTGCCAGTTTACTACCAGATT...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCGAACTCCTGAACTCATaGAGCCCACCAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFELLNS*SPPKCW
Trigger: CCAGCACTTTGGTGGGCTTCATGAGTTCAGGAGTTC...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCGAAGAGCAGCTTCTATaGGATGGCTTCATAGTTCTA +
Preference number: 4 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAEEQLL*DGFIVL
Trigger: TAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTC...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATGGCTCATCGCCACGTTaGTGCCATCAATCACTATGG +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHGSSPR*CHQSLW
Trigger: CCATAGTGATTGATGGCAGCAACGTGGCGATGAGCC...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATCAATGCTCCACTTCCTaGACGCCACAGTCACGTTCA +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENQCSTS*TPQSRS
Trigger: TGAACGTGACTGTGGCGTGCAGGAAGTGGAGCATTG...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATCTAGGAGCCACTTCATaGCAATGCTCCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENLGATS*QCSTSC
Trigger: GCAGGAAGTGGAGCATTGGCATGAAGTGGCTCCTAG...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATACTTGTGGGTTCTACTaGAGCTTGGACCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENTCGFY*SLDPQS
Trigger: AGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGT...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCGCCTATTCTGGAAACTaGCATGATGGATGGCTAATA +
Preference number: 4 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLAYSGN*HDGWLI
Trigger: TATTAGCCATCCATCATGGCAGTTTCCAGAATAGGC...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATTTGCCATGGCCTCACTaGTTCTCCTGGAAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENLPWPH*FSWKRW
Trigger: CCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAA...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp GATCCTGGCTCCCATGAAATCACCGGCCAGGATGTCAGTTCTACAATAACCCTGCACAGCTTTGCTGTGTaGATGACCCCTGCATCCGAC +
Preference number: 4 (lower is better)
Translates to: DPGSHEITGQDVSSTITLHSFAV*MTPASD
Trigger: GTCGGATGCAGGGGTCATGCACACAGCAAAGCTGTG...CAGGGTTATTGTAGAACTGACATCCTGGCCGGTGATTTCATGGGAGCCAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp CTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATAGAATTCCATCTTGCTaGGGTGCTCCATGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LQSWSTSGGGDGVEVGQNRIPSC*GAPCCA
Trigger: GGCACAGCATGGAGCACCCCAGCAAGATGGAATTCT...ATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp TGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATGACTGCCATCAATCACTATaGGTCGCAGAGAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: WSTSGGGDGVEVGQNRDDCHQSL*VAENWP
Trigger: TGGCCAGTTCTCTGCGACCCATAGTGATTGATGGCA...GTCATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp GGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATGACTTTGGAGCACTTCTGGTaGTGGAGATGGAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GALLVVEMEWKSGKIGMTLEHFW*WRWSGS
Trigger: ACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAA...AGTCATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATTTGAGGTTAGTTACATaGCTGCCAAGGGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENLRLVT*LPRGWG
Trigger: TCCCCACCCCCTTGGCAGCCATGTAACTAACCTCAA...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATACCCAGAGCAGTAGCTaGCTAGAAGAAACGGCACCA +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENTQSSS*LEETAP
Trigger: TGGTGCCGTTTCTTCTAGCCAGCTACTGCTCTGGGT...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp GAAATCACCGGCCAGGATGTCAGTTCTACAATAACCCTGTCAGGAAAGTTAACTCCCTGCATCCGACCCTaGCATGGGATCCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EITGQDVSSTITLSGKLTPCIRP*HGILAP
Trigger: GGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGG...AGTTAACTTTCCTGACAGGGTTATTGTAGAACTGACATCCTGGCCGGTGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CCA 90 bp GGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACTGTGCTCCTATTCTTAACTCTTCATaGATAGCAGTGACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: GQEPRPLSTRPALFDCAPILNSS*IAVTKV
Trigger: GACTTTGGTCACTGCTATCCATGAAGAGTTAAGAAT...AGGAGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
3UTR CAA 72 bp CCTCAGGGCAAACCCAAGATGGCAACAGCCTCTGGTTaGATCAGTCGAGGAGAGCTCTGCTGCATGTTTGAA +
Preference number: 4 (lower is better)
Translates to: PQGKPKMATASG*ISRGELCCMFE
Trigger: TTCAAACATGCAGCAGAGCTCTCCTCGACTGATCAAACCAGAGGCTGTTGCCATCTTGGGTTTGCCCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp TGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCTCATCGCCACGTTGCTaGCATCAATCACTATGGGTC +
Preference number: 4 (lower is better)
Translates to: CSLGALLVVEMEWKSGKISSPRC*HQSLWV
Trigger: GACCCATAGTGATTGATGGCAGCAACGTGGCGATGA...GATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTAGCAGCCTGTGTCCTTaGGAACTGCCTGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVSSLCP*ELPAAH
Trigger: ATGTGCAGCAGGCAGTTCCCAAGGACACAGGCTGCT...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGCCCCAGGTCGTCGCTaGAGGCCAGCCGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIAPGRR*RPAERS
Trigger: GCTTCTCTCGGCTGGCCTTCAGCGACGACCTGGGGC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCACTAAATTGATTTTGTaGCCCACTTGTGGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCTKLIL*PTCGFY
Trigger: GTAGAACCCACAAGTGGGTCACAAAATCAATTTAGT...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAAGAGGCCAGGGCCCCTaGGGATTCGGGGGTCGGCAC +
Preference number: 4 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIRGQGP*GFGGRH
Trigger: GTGCCGACCCCCGAATCCTCAGGGGCCCTGGCCTCT...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATGGTCATCTTCAGGCCTaGGATCCCAATATGTTATGG +
Preference number: 4 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHGHLQA*DPNMLW
Trigger: CCATAACATATTGGGATCTCAGGCCTGAAGATGACC...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTAGAATTCCATCTTGCTaGGGTGCTCCATGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVRIPSC*GAPCCA
Trigger: GGCACAGCATGGAGCACCCCAGCAAGATGGAATTCT...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCTTATTTACAAAGAATaGGTCATCTTCAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCLIYKE*VIFRPE
Trigger: CTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAG...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAGGTCGTCGGGTGGCCTaGGCGGGGAAAGCAAGTCGC +
Preference number: 4 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIGRRVA*AGKASR
Trigger: GCGACTTGCTTTCCCCGCGCAGGCCACCCGACGACC...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTCTGAGGCACAAGGATTaGTTGAGCCTGGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVLRHKD*LSLGSQ
Trigger: TTGACTTCCCAGGCTCAAGCAATCCTTGTGCCTCAG...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATAGTCGAGGAGAGCTCTaGTGCATGTTTGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENSRGEL*CMFEQE
Trigger: TTCTTGTTCAAACATGCAGCAGAGCTCTCCTCGACT...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTACTGAAAGTCCCCCAGTaGCGCCGTCGCCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILLKVPQ*RRRPRP
Trigger: CGGCCTGGGGCGACGGCGCCACTGGGGGACTTTCAG...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCATAGCAAACCTCCCCTaGCCACCTGACTACATATTT +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFIANLP*PPDYIF
Trigger: AAATATGTAGTCAGGTGGCCAGGGGAGGTTTGCTAT...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp TGGAACAACACAGAACTGCGGCTGCTGAGACTGGCCACAACCTCAGTCTTCTTCAGAAGGCAGCTCAGCTaGTACAGTAGAAAGCCTATT +
Preference number: 4 (lower is better)
Translates to: WNNTELRLLRLATTSVFFRRQLS*YSRKPI
Trigger: AATAGGCTTTCTACTGTACCAGCTGAGCTGCCTTCT...GAAGAAGACTGAGGTTGTGGCCAGTCTCAGCAGCCGCAGTTCTGTGTTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATCTGTGTTTGTGGTGGTaGCCCACTAAATTGATTTTG +
Preference number: 4 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENLCLWW*PTKLIL
Trigger: CAAAATCAATTTAGTGGGTCACCACCACAAACACAG...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGGCGCCCCCGCGCTCTaGCATCTCTGTACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILGAPAL*HLCTRR
Trigger: CCTCCTGGTACAGAGATGCCAGAGCGCGGGGGCGCC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTGACGCAAGGCGAGGCTaGGCCATTCCCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFDARRG*AIPCKC
Trigger: GCACTTGCAGGGAATGGCCCAGCCTCGCCTTGCGTC...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTGAAGGCCCCAGAAGGTaGCCCTGGGACAAAGCGCTC +
Preference number: 4 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFEGPRR*PWDKAL
Trigger: GAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCCTTC...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp TGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCATGGAACAAAAACTTTaGTGTAGGTGTGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CSLGALLVVEMEWKSGKIMEQKL*CRCVLC
Trigger: ACAGAGGACACACCTACATCAAAGTTTTTGTTCCAT...GATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR TCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTTGTCGTTGGAGACGATaGCGCCGTCCTGCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFCRWRR*RRPARR
Trigger: CCTACGAGCAGGACGGCGTCATCGTCTCCAACGACA...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTCCTGCCAACATCTCATaGAATCTGGTAGTAAACTGG +
Preference number: 4 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVPANIS*NLVVNW
Trigger: CCAGTTTACTACCAGATTTCATGAGATGTTGGCAGG...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTAACTGGCCAGGGTTCTaGAGTCCTCTTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFNWPGF*SPLPGL
Trigger: CAGCCCTGGAAGAGGACTTCAGAACCCTGGCCAGTT...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCTCCGGTCTTCACAATaGATGCTGGCCCAGTCGCCA +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEILRSSQ*MLAQSP
Trigger: TGGCGACTGGGCCAGCATTCATTGTGAAGACCGGAG...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAGCAGCCTCTGCTCGATaGACCACTTCCACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIAASAR*TTSTRG
Trigger: ACCCCGAGTGGAAGTGGTTCATCGAGCAGAGGCTGC...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCTCCTGCTCAGGAAGTTaGTCAGGGAGGGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEISCSGS*SGRVHG
Trigger: GCCATGGACCCTCCCTGAGCAACTTCCTGAGCAGGA...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTTCTTCCCCTGGGAAGTaGCTCCCGCTTTCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFSSPGK*LPLSPN
Trigger: GTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGA...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGGCAAGAGTTCCCTCTaGACCAGCAGGCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIGKSSL*TSRLQE
Trigger: TTCCTGCAGCCTGCTGGTGCAGAGGGAACTCTTGCC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCAGGGGTGTCAGCTCTTaGTGGGTCCTTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIRGVSS*WVLPPG
Trigger: TCCTGGAGGAAGGACCCACCAAGAGCTGACACCCCT...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATACGGGGGTCGGCACTCTaGCAGCACCATCTCACTTCT +
Preference number: 4 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIRGSAL*QHHLTS
Trigger: AGAAGTGAGATGGTGCTGCCAGAGTGCCGACCCCCG...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAAGAGCCCTGCAGACATaGGCAGCAGGGTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILRALQT*AAGCVP
Trigger: AGGGACACACCCTGCTGCTCATGTCTGCAGGGCTCT...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCGCTTTCCCCAAACTaGCAAGCTACCAAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIPLSPN*QATKPS
Trigger: AGAGGGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGG...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAGGTGTCAGCTCTTGGTaGGTCCTTCCTCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIGVSSW*VLPPGW
Trigger: CCATCCTGGAGGAAGGACCCACCAAGAGCTGACACC...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGAGTGCAGAGCGCAGTaGCACAGTCTCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIECRAQ*HSLSSL
Trigger: TAGTGAGCTGAGACTGTGCCACTGCGCTCTGCACTC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTGGCACAAGGATTGCTTaGGCCTGGGAAGTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFGTRIA*AWEVKA
Trigger: AGCTTTGACTTCCCAGGCTCAAGCAATCCTTGTGCC...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGTGCGGATAAGCTCCTaGAGCACGTCGTTGACCAGG +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILVRISS*STSLTR
Trigger: CCTGGTCAACGACGTGCTGCAGGAGCTTATCCGCAC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCTCTAGTGAACAAATaGGCCATAGTCTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIPLVNK*AIVWRA
Trigger: AGCCCTCCAGACTATGGCTCATTTGTTCACTAGAGG...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGGGTGTCATTTACCATaGATGAAAGGGCTGGGAACG +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIGCHLP*MKGLGT
Trigger: CGTTCCCAGCCCTTTCATTCATGGTAAATGACACCC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGCCACTTCATGCCAATaGTCCACTTCCTGCACGCCA +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILATSCQ*STSCTP
Trigger: TGGCGTGCAGGAAGTGGAGCATTGGCATGAAGTGGC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGTCATTTACCATGAATaGAAGGGCTGGGAACGCACT +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIVIYHE*KGWERT
Trigger: AGTGCGTTCCCAGCCCTTTCATTCATGGTAAATGAC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTACATAGTCTGGAGGGCTaGCATGGTAACCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILHSLEG*HGNQNG
Trigger: CCCATTCTGGTTACCATGCCAGCCCTCCAGACTATG...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCAAAATTAGCTGGACGTaGTGGCACAACTGTAGTCCC +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIKISWT*WHNCSP
Trigger: GGGACTACAGTTGTGCCACCACGTCCAGCTAATTTT...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp AACAGAACAGACCAATCTAGGGGAAAGCCAGTAGGAGAAACTAATAGACAATTTAGTTTGAGGCTGCAGTaGGCTATGATCACACTACTA +
Preference number: 4 (lower is better)
Translates to: NRTDQSRGKPVGETNRQFSLRLQ*AMITLL
Trigger: TAGTAGTGTGATCATAGCTCACTGCAGCCTCAAACT...AAATTGTCTATTAGTTTCTCCTACTGGCTTTCCCCTAGATTGGTCTGTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGGTGGCAATAAACTCTaGCTGAGCTCATGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIGGNKL*LSSCQF
Trigger: AAACTGACATGAGCTCAGTCAGAGTTTATTGCCACC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGGAAGAATTCCATCTTaGTGGGGTGCTCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILGRIPS*WGAPCC
Trigger: ACAGCATGGAGCACCCCAGCAAGATGGAATTCTTCC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATATTTGTGACCCACTTGTaGGTTCTACTGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIFVTHL*VLLQLG
Trigger: TCCAAGCTGCAGTAGAACCCACAAGTGGGTCACAAA...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAGGTGACCCACTAAATTaGTTTTGTGACCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILGDPLN*FCDPLV
Trigger: CACAAGTGGGTCACAAAATCAATTTAGTGGGTCACC...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR GCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTACATAGGTGCATTTCTTaGCATAAGGACAATGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILHRCIS*HKDNAA
Trigger: GGCAGCATTGTCCTTATGGCAAGAAATGCACCTATG...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTAATGGAACAAAAACTTTaGTGTAGGTGTGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILMEQKL*CRCVLC
Trigger: ACAGAGGACACACCTACATCAAAGTTTTTGTTCCAT...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR TCA 90 bp ACAAGAAGAGCAGCTTCTATGAGATGGCTTCATAGTTCTATAATGAGGATTTTATTCTGGAAACTGCCATaGTGGATGGCTAATAAAATA +
Preference number: 4 (lower is better)
Translates to: TRRAASMRWLHSSIMRILFWKLP*WMANKI
Trigger: TATTTTATTAGCCATCCATCATGGCAGTTTCCAGAA...TAAAATCCTCATTATAGAACTATGAAGCCATCTCATAGAAGCTGCTCTTCTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CCA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAAACTGCCATGATGGATaGCTAATAAAATATTGGAGA +
Preference number: 4 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPINCHDG*LIKYWR
Trigger: TCTCCAATATTTTATTAGCCATCCATCATGGCAGTT...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 90 bp GCCCGGGGAGAACTGGCTCTCCGGGCTAGGGAGGCTGAGCGGGCCTaGCACCCGGCCGCCCGCGGACACCCAGTCGGGCCCGCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: ARGELALRAREAERA*HPAARGHPVGPAQS
Trigger: CGACTGGGCGGGCCCGACTGGGTGTCCGCGGGCGGCCGGGTGCCAGGCCCGCTCAGCCTCCCTAGCCCGGAGAGCCAGTTCTCCCCGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 90 bp TGGAGCTGCAGGCCGGGCGGAGGCGGGAGGTCGCCCGGGGAGAACTaGCTCTCCGGGCTAGGGAGGCTGAGCGGGCCTGGCACCCGGCCG +
Preference number: 5 (lower is better)
Translates to: WSCRPGGGGRSPGEN*LSGLGRLSGPGTRP
Trigger: CGGCCGGGTGCCAGGCCCGCTCAGCCTCCCTAGCCCGGAGAGCCAGTTCTCCCCGGGCGACCTCCCGCCTCCGCCCGGCCTGCAGCTCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 90 bp GCTGGGCAGAGTCCGGGACCCCACAGGAGCCCCGAGGCACTAGCCTaGGTGCAGCCGGGTGCTCCAGGGCACCCGGGCGGCTGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: AGQSPGPHRSPEALA*VQPGAPGHPGGCPC
Trigger: GCACGGGCAGCCGCCCGGGTGCCCTGGAGCACCCGGCTGCACCCAGGCTAGTGCCTCGGGGCTCCTGTGGGGTCCCGGACTCTGCCCAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS CCA 90 bp CGGCTCCGCCCAGACGGAGCGCCCAGGGAAGCGGTCGGAGCGGGGTaGACGGGCCCACGGGTCGTCGGGTGGCCTGCGCGGGGAAAGCAA +
Preference number: 5 (lower is better)
Translates to: RLRPDGAPREAVGAG*TGPRVVGWPARGKQ
Trigger: TTGCTTTCCCCGCGCAGGCCACCCGACGACCCGTGGGCCCGTCCACCCCGCTCCGACCGCTTCCCTGGGCGCTCCGTCTGGGCGGAGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 90 bp AGCAAGTCGCCGTGCAGGTCCCTAGGGCGGTGTTCGCCCCGCGGCTaGAGCTGCAGGCCGGGCGGAGGCGGGAGGTCGCCCGGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: SKSPCRSLGRCSPRG*SCRPGGGGRSPGEN
Trigger: GTTCTCCCCGGGCGACCTCCCGCCTCCGCCCGGCCTGCAGCTCCAGCCGCGGGGCGAACACCGCCCTAGGGACCTGCACGGCGACTTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 90 bp GGGACCCCACAGGAGCCCCGAGGCACTAGCCTGGGTGCAGCCGGGTaGTCCAGGGCACCCGGGCGGCTGCCCGTGCGGATAAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GTPQEPRGTSLGAAG*SRAPGRLPVRISSC
Trigger: GCAGGAGCTTATCCGCACGGGCAGCCGCCCGGGTGCCCTGGAGCACCCGGCTGCACCCAGGCTAGTGCCTCGGGGCTCCTGTGGGGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS GCA 90 bp GCCCACGGGTCGTCGGGTGGCCTGCGCGGGGAAAGCAAGTCGCCGTaGAGGTCCCTAGGGCGGTGTTCGCCCCGCGGCTGGAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AHGSSGGLRGESKSP*RSLGRCSPRGWSCR
Trigger: CCTGCAGCTCCAGCCGCGGGGCGAACACCGCCCTAGGGACCTGCACGGCGACTTGCTTTCCCCGCGCAGGCCACCCGACGACCCGTGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 90 bp AGGGAAGCGGTCGGAGCGGGGTGGACGGGCCCACGGGTCGTCGGGTaGCCTGCGCGGGGAAAGCAAGTCGCCGTGCAGGTCCCTAGGGCG +
Preference number: 5 (lower is better)
Translates to: REAVGAGWTGPRVVG*PARGKQVAVQVPRA
Trigger: CGCCCTAGGGACCTGCACGGCGACTTGCTTTCCCCGCGCAGGCCACCCGACGACCCGTGGGCCCGTCCACCCCGCTCCGACCGCTTCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 90 bp TCACGCGGTCCACCTGGTCACGCGGGAAGACGCTGTAGAGCGCGATaGGAGCCCGGGCGCGCGCGTCCCCCTCGTCGTCCTCGGTCGCGT +
Preference number: 5 (lower is better)
Translates to: SRGPPGHAGRRCRAR*EPGRARPPRRPRSR
Trigger: ACGCGACCGAGGACGACGAGGGGGACGCGCGCGCCCGGGCTCGCATCGCGCTCTACAGCGTCTTCCCGCGTGACCAGGTGGACCGCGTGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 90 bp GGGTGCTCCAGGGCACCCGGGCGGCTGCCCGTGCGGATAAGCTCCTaGAGCACGTCGTTGACCAGGGCGCCCTCGCCCAGCTTGCCCAAC +
Preference number: 5 (lower is better)
Translates to: GCSRAPGRLPVRISS*STSLTRAPSPSLPN
Trigger: GTTGGGCAAGCTGGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGGAGCTTATCCGCACGGGCAGCCGCCCGGGTGCCCTGGAGCACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS TCA 90 bp TGCCCAGGGGCGCCCCCGCGCTCTGGCATCTCTGTACCAGGAGGATaGGCCTGGCGAGGTCTGAGAGCTCCGGGAACGCGGCCATCACGC +
Preference number: 5 (lower is better)
Translates to: CPGAPPRSGISVPGG*AWRGLRAPGTRPSR
Trigger: GCGTGATGGCCGCGTTCCCGGAGCTCTCAGACCTCGCCAGGCTCATCCTCCTGGTACAGAGATGCCAGAGCGCGGGGGCGCCCCTGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 90 bp CGCTTGCCGTGCACCTTGCGGGACGGCGTGTACACCAGCACCGCCTaGCGCTCCAGCTCCGCCAGCACGTGCTGCTCTCTGATAGGGGTG +
Preference number: 5 (lower is better)
Translates to: RLPCTLRDGVYTSTA*RSSSASTCCSLIGV
Trigger: CACCCCTATCAGAGAGCAGCACGTGCTGGCGGAGCTGGAGCGGCAGGCGGTGCTGGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 90 bp CGATGTAGCGGTCGTCGTAGCAGACCAGGCGCTTGCCGTGCACCTTaGGGGACGGCGTGTACACCAGCACCGCCTGCCGCTCCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: RCSGRRSRPGACRAP*GTACTPAPPAAPAP
Trigger: CGGAGCTGGAGCGGCAGGCGGTGCTGGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGCGCCTGGTCTGCTACGACGACCGCTACATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 90 bp CTGGCCCAGTCGCCAGCAGCCTTCACGCCAATGTTCTCCCGTCAGTaGGGCCAGGCCCCCAGGTGCCACTGGAGTCAGAGGAGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LAQSPAAFTPMFSRQ*GQAPRCHWSQRRAA
Trigger: AGCTGCCCTCCTCTGACTCCAGTGGCACCTGGGGGCCTGGCCTCACTGACGGGAGAACATTGGCGTGAAGGCTGCTGGCGACTGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 90 bp CGCGCTCTGGCATCTCTGTACCAGGAGGATGAGCCTGGCGAGGTCTaGGAGCTCCGGGAACGCGGCCATCACGCGGTCCACCTGGTCACG +
Preference number: 5 (lower is better)
Translates to: RALASLYQEDEPGEV*ELRERGHHAVHLVT
Trigger: CGTGACCAGGTGGACCGCGTGATGGCCGCGTTCCCGGAGCTCTCAGACCTCGCCAGGCTCATCCTCCTGGTACAGAGATGCCAGAGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 90 bp AGGCCACCTTCACGATGTAGCGGTCGTCGTAGCAGACCAGGCGCTTaGCGTGCACCTTGCGGGACGGCGTGTACACCAGCACCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: RPPSRCSGRRSRPGA*RAPCGTACTPAPPA
Trigger: GGCAGGCGGTGCTGGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGCGCCTGGTCTGCTACGACGACCGCTACATCGTGAAGGTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATATCCTGCAGCACGTCGTaGACCAGGGCGCCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GPRRWPWDKALLPLVPSISCSTS*TRAPSP
Trigger: GGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGGA...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp CTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGCGCTTGCCGTGCACCTaGCGGGACGGCGTGTACACC +
Preference number: 5 (lower is better)
Translates to: LQVAQLEGRTWARAQAAERLPCT*RDGVYT
Trigger: GGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGCG...CTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CAA 90 bp CCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCCATGGCCTCGTCGGCCACCGCCAGTaGCGCGTGGTGCGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: PWELPAAHPAKGGPCHGLVGHRQ*RVVRPL
Trigger: GAGAGGCCGCACCACGCGCAACTGGCGGTGGCCGAC...GAGGCCATGGCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 90 bp GCCAGGCCCCCAGGTGCCACTGGAGTCAGAGGAGGGCAGCTGGCGTaGGCCAAGCAGCCACTAGGAGCCACTTCATGCCAATGCTCCACT +
Preference number: 5 (lower is better)
Translates to: ARPPGATGVRGGQLA*AKQPLGATSCQCST
Trigger: AGTGGAGCATTGGCATGAAGTGGCTCCTAGTGGCTGCTTGGCGCACGCCAGCTGCCCTCCTCTGACTCCAGTGGCACCTGGGGGCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCGCGCCCTCGCCCAGCTaGCCCAACACCCGGAGCACA +
Preference number: 5 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAAPSPS*PNTRST
Trigger: TGTGCTCCGGGTGTTGGGCAAGCTGGGCGAGGGCGC...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGTTCCTGCTCAGGAAGTaGCTCAGGGAGGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQFLLRK*LREGPW
Trigger: CCATGGACCCTCCCTGAGCAACTTCCTGAGCAGGAA...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGAGCAAAGGGAGGTCCTaGCCATGGCCTCACTGCTTC +
Preference number: 5 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQSKGRS*PWPHCF
Trigger: GAAGCAGTGAGGCCATGGCAAGGACCTCCCTTTGCT...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp CTGAGACCCGCAGCTGGGTTTGTGTCCAGGCTCCCGGCTTCTCAGACACAGCTTGCTGGAGGGCAGAACTaGGGCAAGAGCCCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: LRPAAGFVSRLPASQTQLAGGQN*GKSPGR
Trigger: GCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGC...AAGCTGTGTCTGAGAAGCCGGGAGCCTGGACACAAACCCAGCTGCGGGTCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS GCA 90 bp CATAAGGACAATGCTGCCAGGATGGCTCTGGGGGCTTCGGCTTCCTaGTCAGGAAGTTGCTCAGGGAGGGTCCATGGCGGCCCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: HKDNAARMALGASAS*SGSCSGRVHGGPGG
Trigger: ACCCCCTGGGCCGCCATGGACCCTCCCTGAGCAACTTCCTGAGCAGGAAGCCGAAGCCCCCAGAGCCATCCTGGCAGCATTGTCCTTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409806.8
ENST00000458251.1
CDS-3UTR CAA 90 bp ATTGCCCTGCAGTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGTCCTGCAGCACGTCGTaGACCAGGGCGCCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: IALQSWSTSGGGDGVEVGSCSTS*TRAPSP
Trigger: GGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGGA...CCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGACTGCAGGGCAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CAA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGCAGTCAACAGCCAGCTaGATTCCCCGGCAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQQSTAS*IPRQEK
Trigger: CTTCTCTTGCCGGGGAATCAAGCTGGCTGTTGACTG...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp CACTCAGGTCCAGGCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGCAGGGTCTCACCAGGTaGACCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: HSGPGWQPQVHPSKTQGEQGLTR*TRLVSN
Trigger: GTTCGAGACCAGCCTGGTCAACCTGGTGAGACCCTG...CTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGCCTGGACCTGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp GTCTTGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGAGCGCCCTCGCCCAGCTaGCCCAACACCCGGAGCACA +
Preference number: 5 (lower is better)
Translates to: VLEHFWWWRWSGSRAKSGAPSPS*PNTRST
Trigger: TGTGCTCCGGGTGTTGGGCAAGCTGGGCGAGGGCGC...TCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS CCA 90 bp GCGAAGCACTGGGCCCTACCCACCATAAGGACAATGCTGCCAGGATaGCTCTGGGGGCTTCGGCTTCCTGCTCAGGAAGTTGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: AKHWALPTIRTMLPG*LWGLRLPAQEVAQG
Trigger: TCCCTGAGCAACTTCCTGAGCAGGAAGCCGAAGCCCCCAGAGCCATCCTGGCAGCATTGTCCTTATGGTGGGTAGGGCCCAGTGCTTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CAA 90 bp TGCTGTGTGCATGACCCCTGCATCCGACCCTGGCATGGGATCCTGGCTCCCATGTTCCTGCTCAGGAAGTaGCTCAGGGAGGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: CCVHDPCIRPWHGILAPMFLLRK*LREGPW
Trigger: CCATGGACCCTCCCTGAGCAACTTCCTGAGCAGGAA...CATGGGAGCCAGGATCCCATGCCAGGGTCGGATGCAGGGGTCATGCACACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CAA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCAGGCACAAGGATTGCTaGAGCCTGGGAAGTCAAAGC +
Preference number: 5 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSRHKDC*SLGSQS
Trigger: GCTTTGACTTCCCAGGCTCAAGCAATCCTTGTGCCT...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp GGCCCCAGAAGGTGGCCCTGGGACAAAGCGCTCCTACCACTTGTCCCCAGCATAAAGCAGCCTGTGTCCTaGGGAACTGCCTGCTGCACA +
Preference number: 5 (lower is better)
Translates to: GPRRWPWDKALLPLVPSIKQPVS*GTACCT
Trigger: TGTGCAGCAGGCAGTTCCCAAGGACACAGGCTGCTT...TATGCTGGGGACAAGTGGTAGGAGCGCTTTGTCCCAGGGCCACCTTCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 90 bp CCCTGCAGACATGAGCAGCAGGGTGTGTCCCTCCGGTCTTCACAATaGATGCTGGCCCAGTCGCCAGCAGCCTTCACGCCAATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PCRHEQQGVSLRSSQ*MLAQSPAAFTPMFS
Trigger: GGAGAACATTGGCGTGAAGGCTGCTGGCGACTGGGCCAGCATTCATTGTGAAGACCGGAGGGACACACCCTGCTGCTCATGTCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 90 bp CAGCGCTTTTTGACTGTGCTCCTGTACTGCCCCCACACAAGGCCCTaGACAGGGCCTGCGAAGCACTGGGCCCTACCCACCATAAGGACA +
Preference number: 5 (lower is better)
Translates to: QRFLTVLLYCPHTRP*TGPAKHWALPTIRT
Trigger: TGTCCTTATGGTGGGTAGGGCCCAGTGCTTCGCAGGCCCTGTTCAGGGCCTTGTGTGGGGGCAGTACAGGAGCACAGTCAAAAAGCGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS GCA 90 bp GCAGACATGAGCAGCAGGGTGTGTCCCTCCGGTCTTCACAATGAATaGTGGCCCAGTCGCCAGCAGCCTTCACGCCAATGTTCTCCCGTC +
Preference number: 5 (lower is better)
Translates to: ADMSSRVCPSGLHNE*WPSRQQPSRQCSPV
Trigger: GACGGGAGAACATTGGCGTGAAGGCTGCTGGCGACTGGGCCAGCATTCATTGTGAAGACCGGAGGGACACACCCTGCTGCTCATGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp CTTGGGCAAGAGCCCAGGCCGCTGAGCACCAGGCCAGCGCTTTTTGACTGTGCTGGCATGAACCGGTCGTaGACGAAGGAGAACATGAGC +
Preference number: 5 (lower is better)
Translates to: LGQEPRPLSTRPALFDCAGMNRS*TKENMS
Trigger: GCTCATGTTCTCCTTCGTCAACGACCGGTTCATGCC...AGCACAGTCAAAAAGCGCTGGCCTGGTGCTCAGCGGCCTGGGCTCTTGCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CAA 90 bp GCTGGCAACCACAGGTCCACCCGTCCAAGACGCAAGGCGAGGCTGGGCCATTCCTTAGAGTGGCTTGTCTaGCTTCTACTCCTCAACCCC +
Preference number: 5 (lower is better)
Translates to: AGNHRSTRPRRKARLGHSLEWLV*LLLLNP
Trigger: GGGGTTGAGGAGTAGAAGCAAGACAAGCCACTCTAA...GGAATGGCCCAGCCTCGCCTTGCGTCTTGGACGGGTGGACCTGTGGTTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 90 bp GACATGAGCAGCAGGGTGTGTCCCTCCGGTCTTCACAATGAATGCTaGCCCAGTCGCCAGCAGCCTTCACGCCAATGTTCTCCCGTCAGT +
Preference number: 5 (lower is better)
Translates to: DMSSRVCPSGLHNEC*PSRQQPSRQCSPVS
Trigger: ACTGACGGGAGAACATTGGCGTGAAGGCTGCTGGCGACTGGGCCAGCATTCATTGTGAAGACCGGAGGGACACACCCTGCTGCTCATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp GTCTTCCCCTGGGAAGTGCCTCCCGCTTTCCCCAAACTGCCAAGCTACCAAGCCGCAACAGCCTCTGGTTaGATCAGTCGAGGAGAGCTC +
Preference number: 5 (lower is better)
Translates to: VFPWEVPPAFPKLPSYQAATASG*ISRGEL
Trigger: GAGCTCTCCTCGACTGATCAAACCAGAGGCTGTTGC...GGCTTGGTAGCTTGGCAGTTTGGGGAAAGCGGGAGGCACTTCCCAGGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 90 bp CACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATaGCTAACAGGTGAGCTGAGCTACTCCCTGGCAGCTGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: HFWWWRWSGSRAKSG*LTGELSYSLAAAPR
Trigger: CCTGGGAGCAGCTGCCAGGGAGTAGCTCAGCTCACCTGTTAGTCATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS-3UTR CAA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTCGCTTGCCGTGCACCTaGCGGGACGGCGTGTACACC +
Preference number: 5 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVRLPCT*RDGVYT
Trigger: GGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGCG...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp AGCCTGTGTCCTTGGGAACTGCCTGCTGCACATCCAGCAAAGGGAGGTCCTTGCGGCATGAACCGGTCGTaGACGAAGGAGAACATGAGC +
Preference number: 5 (lower is better)
Translates to: SLCPWELPAAHPAKGGPCGMNRS*TKENMS
Trigger: GCTCATGTTCTCCTTCGTCAACGACCGGTTCATGCC...GCAAGGACCTCCCTTTGCTGGATGTGCAGCAGGCAGTTCCCAAGGACACAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp ATCATTCCCTCCACGGAAGTGGGTGGACCTCCCCGCAGCAGGCCCCGGCCTCAGTATGTTATGGTAAAATaGTGGGTGCACCGTCCTCTT +
Preference number: 5 (lower is better)
Translates to: IIPSTEVGGPPRSRPRPQYVMVK*WVHRPL
Trigger: AAGAGGACGGTGCACCCACAATTTTACCATAACATA...CTGAGGCCGGGGCCTGCTGCGGGGAGGTCCACCCACTTCCGTGGAGGGAATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp GATCCTGGCTCCCATGAAATCACCGGCCAGGATGTCAGTTCTACAATAACCCTGGACCCGCAGCTGGGTTaGTGTCCAGGCTCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: DPGSHEITGQDVSSTITLDPQLG*CPGSRL
Trigger: AAGCCGGGAGCCTGGACACAAACCCAGCTGCGGGTC...CAGGGTTATTGTAGAACTGACATCCTGGCCGGTGATTTCATGGGAGCCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CAA 90 bp TGGAGCACTTCTGGTGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATGACCATTGCCCTGCAGTCTaGGAGCACTTCTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: WSTSGGGDGVEVGQNRDDHCPAV*EHFWWW
Trigger: CCACCACCAGAAGTGCTCCAAGACTGCAGGGCAATG...GTCATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCACCAGAAGTGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS CCA 90 bp GATGCCATAGGTGCATTTCTTGCCATAAGGACAATGCTGCCAGGATaGCTCTGGGGGCTTCGGCTTCCTGCTCAGGAAGTTGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: DAIGAFLAIRTMLPG*LWGLRLPAQEVAQG
Trigger: TCCCTGAGCAACTTCCTGAGCAGGAAGCCGAAGCCCCCAGAGCCATCCTGGCAGCATTGTCCTTATGGCAAGAAATGCACCTATGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATGCTGAGGCACAAGGATaGCTTGAGCCTGGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHAEAQG*LEPGKS
Trigger: TGACTTCCCAGGCTCAAGCAATCCTTGTGCCTCAGC...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp CTCCAGGTAGCACAGCTGGAGGGCAGAACTTGGGCAAGAGCCCAGGCCGCTGAGGAAACATCAAATAACTaGACGAAGCAAGTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LQVAQLEGRTWARAQAAEETSNN*TKQVSE
Trigger: TTCACTGACTTGCTTCGTCAAGTTATTTGATGTTTC...CTCAGCGGCCTGGGCTCTTGCCCAAGTTCTGCCCTCCAGCTGTGCTACCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS-3UTR CAA 90 bp CTTGCCATGGCCTCACTGCTTCTCCTGGAAAAGGTGGATTTGAGCCCCTCACATAGCTCTGCTGCATGTTaGAACAAGAAGAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LAMASLLLLEKVDLSPSHSSAAC*NKKSSF
Trigger: GAAGCTGCTCTTCTTGTTCAAACATGCAGCAGAGCT...ATGTGAGGGGCTCAAATCCACCTTTTCCAGGAGAAGCAGTGAGGCCATGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 90 bp CCTCCAGAACTCAGCCACCATGGTGAGGAGAAAGTTGTCTTGTCCTaGGCTTTTCCACAGAGGCCAAACAGAAAGTTTCTGGTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PPELSHHGEEKVVLS*AFPQRPNRKFLVQL
Trigger: GAGCTGAACCAGAAACTTTCTGTTTGGCCTCTGTGGAAAAGCTCAGGACAAGACAACTTTCTCCTCACCATGGTGGCTGAGTTCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462655.1
CDS-3UTR CAA 90 bp CACTTGTGGGTTCTACTGCAGCTTGGACCCGCAGTCTCCGTGCACATGGAAAATAACCCACCTGTAGATTaGAGAGCAAAAGTCCTGACT +
Preference number: 5 (lower is better)
Translates to: HLWVLLQLGPAVSVHMENNPPVD*RAKVLT
Trigger: AGTCAGGACTTTTGCTCTCAAATCTACAGGTGGGTT...ATTTTCCATGTGCACGGAGACTGCGGGTCCAAGCTGCAGTAGAACCCACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 90 bp CTATCGATGTTAGAAGTGCACCAAGGAAACGTGTCTAGTACCTCTTaGGCATACATCTGCTCCAGCATACCTCTGATAGGGGTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: LSMLEVHQGNVSSTS*AYICSSIPLIGVSA
Trigger: AGCTGACACCCCTATCAGAGGTATGCTGGAGCAGATGTATGCTCAAGAGGTACTAGACACGTTTCCTTGGTGCACTTCTAACATCGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462655.1
CDS-3UTR CAA 90 bp AAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCCAATAGAGGCTGGGCTGCCCTaGCGGGTGGGGTTAGCAATA +
Preference number: 5 (lower is better)
Translates to: KIQLIYKEWVIFRPEIPIEAGLP*RVGLAI
Trigger: TATTGCTAACCCCACCCGCAAGGGCAGCCCAGCCTC...TATTGGGATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp AAAAGTCCTGACTCATCCAGCCCCAGTGTAACTGTGAAGTGCGGCTGTCATGTTCAAAGGGGATTACACTaGAAATGTGCTGTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: KSPDSSSPSVTVKCGCHVQRGLH*KCAVFS
Trigger: TGAAAACACAGCACATTTCAAGTGTAATCCCCTTTG...AACATGACAGCCGCACTTCACAGTTACACTGGGGCTGGATGAGTCAGGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGGTGCACCGTCCTCTTaGGAAAAAGGGGGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIGAPSS*EKGGKE
Trigger: TTCCTTACCCCCTTTTTCCAAAGAGGACGGTGCACC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCGATTTTGTGACCCACTaGTGGGTTCTACTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEIDFVTH*WVLLQL
Trigger: AAGCTGCAGTAGAACCCACAAGTGGGTCACAAAATC...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS-3UTR CAA 90 bp ATGAGGAAAATCCAACTTATTTACAAAGAATGGGTCATCTTCAGGCCTGAGATCCTGGATCCATTTTATTaGGAAGAATGCCAATTAGAG +
Preference number: 5 (lower is better)
Translates to: MRKIQLIYKEWVIFRPEILDPFY*EECQLE
Trigger: CTCTAATTGGCATTCTTCCAAATAAAATGGATCCAG...GATCTCAGGCCTGAAGATGACCCATTCTTTGTAAATAAGTTGGATTTTCCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 72 bp GCTCCTCGGCGCCCGCGCCAGGCCGGGCCCCTGTCTTaGCGCGGAGCTCGTCGGCCACCGCCAGTTGCGCGT +
Preference number: 6 (lower is better)
Translates to: APRRPRQAGPLS*RGARRPPPVAR
Trigger: ACGCGCAACTGGCGGTGGCCGACGAGCTCCGCGCCAAGACAGGGGCCCGGCCTGGCGCGGGCGCCGAGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 72 bp GAACTGGCTCTCCGGGCTAGGGAGGCTGAGCGGGCCTaGCACCCGGCCGCCCGCGGACACCCAGTCGGGCCC +
Preference number: 6 (lower is better)
Translates to: ELALRAREAERA*HPAARGHPVGP
Trigger: GGGCCCGACTGGGTGTCCGCGGGCGGCCGGGTGCCAGGCCCGCTCAGCCTCCCTAGCCCGGAGAGCCAGTTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 72 bp GTCGGAGCGGGGTGGACGGGCCCACGGGTCGTCGGGTaGCCTGCGCGGGGAAAGCAAGTCGCCGTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: VGAGWTGPRVVG*PARGKQVAVQV
Trigger: GACCTGCACGGCGACTTGCTTTCCCCGCGCAGGCCACCCGACGACCCGTGGGCCCGTCCACCCCGCTCCGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 72 bp AGGGCACCCGGGCGGCTGCCCGTGCGGATAAGCTCCTaGAGCACGTCGTTGACCAGGGCGCCCTCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: RAPGRLPVRISS*STSLTRAPSPS
Trigger: GCTGGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGGAGCTTATCCGCACGGGCAGCCGCCCGGGTGCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS GCA 72 bp TCGTCGGGTGGCCTGCGCGGGGAAAGCAAGTCGCCGTaGAGGTCCCTAGGGCGGTGTTCGCCCCGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSGGLRGESKSP*RSLGRCSPRGW
Trigger: CCAGCCGCGGGGCGAACACCGCCCTAGGGACCTGCACGGCGACTTGCTTTCCCCGCGCAGGCCACCCGACGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 72 bp CCACCTGGTCACGCGGGAAGACGCTGTAGAGCGCGATaGGAGCCCGGGCGCGCGCGTCCCCCTCGTCGTCCT +
Preference number: 6 (lower is better)
Translates to: PPGHAGRRCRAR*EPGRARPPRRP
Trigger: AGGACGACGAGGGGGACGCGCGCGCCCGGGCTCGCATCGCGCTCTACAGCGTCTTCCCGCGTGACCAGGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CAA 90 bp GCACCCGGGCGGCTGCCCGTGCGGATAAGCTCCTGCAGCACGTCGTaGACCAGGGCGCCCTCGCCCAGCTTGCCCAACACCCGGAGCACA +
Preference number: 6 (lower is better)
Translates to: APGRLPVRISSCSTS*TRAPSPSLPNTRST
Trigger: TGTGCTCCGGGTGTTGGGCAAGCTGGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGGAGCTTATCCGCACGGGCAGCCGCCCGGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS CCA 72 bp CAAGGCGAGGCTGGGCCATTCCCTGCAAGTGCGTGTTaGTCCCTTAGGGCTTGCCCAGGGGCGCCCCCGCGC +
Preference number: 6 (lower is better)
Translates to: QGEAGPFPASAC*SLRACPGAPPR
Trigger: GCGCGGGGGCGCCCCTGGGCAAGCCCTAAGGGACCAACACGCACTTGCAGGGAATGGCCCAGCCTCGCCTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CAA 90 bp AGGCCGGGCCCCTGTCTTGGCGCGGAGCTCGTCGGCCACCGCCAGTaGCGCGTGGTGCGGCCTCTCCGGGTGGTAGAACTTGCACTTGAT +
Preference number: 6 (lower is better)
Translates to: RPGPCLGAELVGHRQ*RVVRPLRVVELALD
Trigger: ATCAAGTGCAAGTTCTACCACCCGGAGAGGCCGCACCACGCGCAACTGGCGGTGGCCGACGAGCTCCGCGCCAAGACAGGGGCCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 72 bp GGTCGTCGTAGCAGACCAGGCGCTTGCCGTGCACCTTaGGGGACGGCGTGTACACCAGCACCGCCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: GRRSRPGACRAP*GTACTPAPPAA
Trigger: AGCGGCAGGCGGTGCTGGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGCGCCTGGTCTGCTACGACGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CAA 72 bp CGGCTGCCCGTGCGGATAAGCTCCTGCAGCACGTCGTaGACCAGGGCGCCCTCGCCCAGCTTGCCCAACACC +
Preference number: 6 (lower is better)
Translates to: RLPVRISSCSTS*TRAPSPSLPNT
Trigger: GGTGTTGGGCAAGCTGGGCGAGGGCGCCCTGGTCAACGACGTGCTGCAGGAGCTTATCCGCACGGGCAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS CAA 72 bp GATGGCTCTGGGGGCTTCGGCTTCCTGCTCAGGAAGTaGCTCAGGGAGGGTCCATGGCGGCCCAGGGGGTCA +
Preference number: 6 (lower is better)
Translates to: DGSGGFGFLLRK*LREGPWRPRGS
Trigger: TGACCCCCTGGGCCGCCATGGACCCTCCCTGAGCAACTTCCTGAGCAGGAAGCCGAAGCCCCCAGAGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409806.8
ENST00000458251.1
CDS TCA 72 bp TCGCCAGCAGCCTTCACGCCAATGTTCTCCCGTCAGTaGGGCCAGGCCCCCAGGTGCCACTGGAGTCAGAGG +
Preference number: 6 (lower is better)
Translates to: SPAAFTPMFSRQ*GQAPRCHWSQR
Trigger: CCTCTGACTCCAGTGGCACCTGGGGGCCTGGCCTCACTGACGGGAGAACATTGGCGTGAAGGCTGCTGGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 72 bp GCATCTCTGTACCAGGAGGATGAGCCTGGCGAGGTCTaGGAGCTCCGGGAACGCGGCCATCACGCGGTCCAC +
Preference number: 6 (lower is better)
Translates to: ASLYQEDEPGEV*ELRERGHHAVH
Trigger: GTGGACCGCGTGATGGCCGCGTTCCCGGAGCTCTCAGACCTCGCCAGGCTCATCCTCCTGGTACAGAGATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 72 bp TCACGATGTAGCGGTCGTCGTAGCAGACCAGGCGCTTaGCGTGCACCTTGCGGGACGGCGTGTACACCAGCA +
Preference number: 6 (lower is better)
Translates to: SRCSGRRSRPGA*RAPCGTACTPA
Trigger: TGCTGGTGTACACGCCGTCCCGCAAGGTGCACGGCAAGCGCCTGGTCTGCTACGACGACCGCTACATCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409806.8
ENST00000458251.1
CDS TCA 72 bp CAATCACTATGGGTCGCAGAGAACTGGCCAGGGTTCTaGAGTCCTCTTCCAGGGCTGTCCCCGGGCCACGCT +
Preference number: 6 (lower is better)
Translates to: QSLWVAENWPGF*SPLPGLSPGHA
Trigger: AGCGTGGCCCGGGGACAGCCCTGGAAGAGGACTTCAGAACCCTGGCCAGTTCTCTGCGACCCATAGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS TCA 72 bp CATGAGCAGCAGGGTGTGTCCCTCCGGTCTTCACAATaGATGCTGGCCCAGTCGCCAGCAGCCTTCACGCCA +
Preference number: 6 (lower is better)
Translates to: HEQQGVSLRSSQ*MLAQSPAAFTP
Trigger: TGGCGTGAAGGCTGCTGGCGACTGGGCCAGCATTCATTGTGAAGACCGGAGGGACACACCCTGCTGCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 72 bp CTGGCGTGCGCCAAGCAGCCACTAGGAGCCACTTCATaGCAATGCTCCACTTCCTGCACGCCACAGTCACGT +
Preference number: 6 (lower is better)
Translates to: LACAKQPLGATS*QCSTSCTPQSR
Trigger: ACGTGACTGTGGCGTGCAGGAAGTGGAGCATTGGCATGAAGTGGCTCCTAGTGGCTGCTTGGCGCACGCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS GCA 72 bp AGCAGCAGGGTGTGTCCCTCCGGTCTTCACAATGAATaGTGGCCCAGTCGCCAGCAGCCTTCACGCCAATGT +
Preference number: 6 (lower is better)
Translates to: SSRVCPSGLHNE*WPSRQQPSRQC
Trigger: ACATTGGCGTGAAGGCTGCTGGCGACTGGGCCAGCATTCATTGTGAAGACCGGAGGGACACACCCTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 72 bp TGGGCCCTACCCACCATAAGGACAATGCTGCCAGGATaGCTCTGGGGGCTTCGGCTTCCTGCTCAGGAAGTT +
Preference number: 6 (lower is better)
Translates to: WALPTIRTMLPG*LWGLRLPAQEV
Trigger: AACTTCCTGAGCAGGAAGCCGAAGCCCCCAGAGCCATCCTGGCAGCATTGTCCTTATGGTGGGTAGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458251.1
CDS TCA 72 bp GAGTGGAAGTCGGGCAAAATCGGGATGACTAACAGGTaGGCTGAGCTACTCCCTGGCAGCTGCTCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: EWKSGKIGMTNR*AELLPGSCSQE
Trigger: CTCCTGGGAGCAGCTGCCAGGGAGTAGCTCAGCTCACCTGTTAGTCATCCCGATTTTGCCCGACTTCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS GCA 72 bp TGCGCCAAGCAGCCACTAGGAGCCACTTCATGCCAATaGTCCACTTCCTGCACGCCACAGTCACGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: CAKQPLGATSCQ*STSCTPQSRSA
Trigger: AGCTGAACGTGACTGTGGCGTGCAGGAAGTGGAGCATTGGCATGAAGTGGCTCCTAGTGGCTGCTTGGCGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CCA 72 bp AGCAGGGTGTGTCCCTCCGGTCTTCACAATGAATGCTaGCCCAGTCGCCAGCAGCCTTCACGCCAATGTTCT +
Preference number: 6 (lower is better)
Translates to: SRVCPSGLHNEC*PSRQQPSRQCS
Trigger: AGAACATTGGCGTGAAGGCTGCTGGCGACTGGGCCAGCATTCATTGTGAAGACCGGAGGGACACACCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS TCA 72 bp TGGTGGAGATGGAGTGGAAGTCGGGCAAAATCGGGATaGCTAACAGGTGAGCTGAGCTACTCCCTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: WWRWSGSRAKSG*LTGELSYSLAA
Trigger: AGCTGCCAGGGAGTAGCTCAGCTCACCTGTTAGTCATCCCGATTTTGCCCGACTTCCACTCCATCTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409948.1
CDS CCA 72 bp GGTGCATTTCTTGCCATAAGGACAATGCTGCCAGGATaGCTCTGGGGGCTTCGGCTTCCTGCTCAGGAAGTT +
Preference number: 6 (lower is better)
Translates to: GAFLAIRTMLPG*LWGLRLPAQEV
Trigger: AACTTCCTGAGCAGGAAGCCGAAGCCCCCAGAGCCATCCTGGCAGCATTGTCCTTATGGCAAGAAATGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409806.8
CDS CAA 72 bp AGCCTCCAGAACTCAGCCACCATGGTGAGGAGAAAGTaGTCTTGTCCTGAGCTTTTCCACAGAGGCCAAACA +
Preference number: 6 (lower is better)
Translates to: SLQNSATMVRRK*SCPELFHRGQT
Trigger: TGTTTGGCCTCTGTGGAAAAGCTCAGGACAAGACAACTTTCTCCTCACCATGGTGGCTGAGTTCTGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462655.1
CDS GCA 72 bp AGGTTTCTTTATTTCCATGGCTCATCGCCACGTTGCTaGCATCAATCACTATGGGTCGCAGAGAACTGGCCA +
Preference number: 6 (lower is better)
Translates to: RFLYFHGSSPRC*HQSLWVAENWP
Trigger: TGGCCAGTTCTCTGCGACCCATAGTGATTGATGGCAGCAACGTGGCGATGAGCCATGGAAATAAAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409806.8
ENST00000409948.1
ENST00000462655.1
CDS TCA 72 bp TTAGAAGTGCACCAAGGAAACGTGTCTAGTACCTCTTaGGCATACATCTGCTCCAGCATACCTCTGATAGGG +
Preference number: 6 (lower is better)
Translates to: LEVHQGNVSSTS*AYICSSIPLIG
Trigger: CCCTATCAGAGGTATGCTGGAGCAGATGTATGCTCAAGAGGTACTAGACACGTTTCCTTGGTGCACTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462655.1