RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H12C (Homo sapiens)

Ensembl gene IDs: ENSG00000149289

Ensembl transcript IDs: ENST00000278590.8, ENST00000453089.2, ENST00000528673.5

Found 540 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTCACATGCGAGTAGGGTTGCTTTCAGACAGACACCACTCAGAATaGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGT +
Preference number: 1 (lower is better)
Translates to: FHMRVGLLSDRHHSE*VVWPHPYYFWIQMS
Trigger: ACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAACCCTACTCGCATGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CCA 90 bp TCTGTATCCCATGCAAGAAAGGAGGAGATACTAAGGGCCAGTATTTaGCCAATTGGGTACTATTCCCTCTGGACTAAGACACAGAGACAA +
Preference number: 1 (lower is better)
Translates to: SVSHARKEEILRASI*PIGYYSLWTKTQRQ
Trigger: TTGTCTCTGTGTCTTAGTCCAGAGGGAATAGTACCCAATTGGCCAAATACTGGCCCTTAGTATCTCCTCCTTTCTTGCATGGGATACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR TCA 90 bp TGGACGCAACAGTCAAGTGATGTCAATCACACAACTGTCTGCCACTaGCTGCAAAATCTATCTTCTACTCCGCAGAAATGTATTCACCAC +
Preference number: 1 (lower is better)
Translates to: WTQQSSDVNHTTVCH*LQNLSSTPQKCIHH
Trigger: GTGGTGAATACATTTCTGCGGAGTAGAAGATAGATTTTGCAGTCAGTGGCAGACAGTTGTGTGATTGACATCACTTGACTGTTGCGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR GCA 90 bp CGCAACAGTCAAGTGATGTCAATCACACAACTGTCTGCCACTGACTaGAAAATCTATCTTCTACTCCGCAGAAATGTATTCACCACTAGC +
Preference number: 1 (lower is better)
Translates to: RNSQVMSITQLSATD*KIYLLLRRNVFTTS
Trigger: GCTAGTGGTGAATACATTTCTGCGGAGTAGAAGATAGATTTTGCAGTCAGTGGCAGACAGTTGTGTGATTGACATCACTTGACTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CCA 90 bp AGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTaGATACAGATGAGTGCCACACTCATTTCAAACACAACAGCAATA +
Preference number: 1 (lower is better)
Translates to: RHHSEWVVWPHPYYF*IQMSATLISNTTAI
Trigger: TATTGCTGTTGTGTTTGAAATGAGTGTGGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR GCA 90 bp ATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTaGCACACTCATTTCAAACACAACAGCAATAATTGTGTAGAATAC +
Preference number: 1 (lower is better)
Translates to: MGCVASPILFLDTDE*HTHFKHNSNNCVEY
Trigger: GTATTCTACACAATTATTGCTGTTGTGTTTGAAATGAGTGTGGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR TCA 90 bp AGAAAGGTGGCGAAAGCTTCAATGAACAGCGTTTTGTTATTCATCTaGAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAA +
Preference number: 1 (lower is better)
Translates to: RKVAKASMNSVLLFI*NTWTENWQIWYMVQ
Trigger: TTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAGATGAATAACAAAACGCTGTTCATTGAAGCTTTCGCCACCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR GCA 90 bp CACAGAACAGAGGATAAATACAATCACACTAGTTTATCAGATGGTTaGACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTCG +
Preference number: 1 (lower is better)
Translates to: HRTEDKYNHTSLSDG*TTHPLPYFSYKKSS
Trigger: CGAACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATAAACTAGTGTGATTGTATTTATCCTCTGTTCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR TCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTGTAAAGCAATCCCGTaGTACTTCCACCATGTGGGG +
Preference number: 2 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIICKAIP*YFHHVG
Trigger: CCCCACATGGTGGAAGTATCACGGGATTGCTTTACA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR TCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGCCCACAGGCCCAATCTaGCCGGCTTCCCGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: CSAACTSNEFKITYDHMKPTGPI*PASRFC
Trigger: ACAGAAACGGGAAGCCGGTCAGATTGGGCCTGTGGG...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCTCTAAATCTTATCATTaGCCGTCCAGACCCCAGACT +
Preference number: 2 (lower is better)
Translates to: LQELDDNKMGAPHTNRMASKSYH*PSRPQT
Trigger: AGTCTGGGGTCTGGACGGCCAATGATAAGATTTAGA...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR TCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTGACGCAACAGTCAAGTaGTGTCAATCACACAACTGT +
Preference number: 2 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIDATVK*CQSHNC
Trigger: ACAGTTGTGTGATTGACATCACTTGACTGTTGCGTC...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATGAAGGAGATCACATGTaGTATTGTAGCAAACCTCCC +
Preference number: 2 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYEGDHM*YCSKPP
Trigger: GGGAGGTTTGCTACAATAGCACATGTGATCTCCTTC...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCCCAAATCCTACTTCGTaGAACACACAGTGTCACACA +
Preference number: 2 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAPNPTS*NTQCHT
Trigger: TGTGTGACACTGTGTGTTGCACGAAGTAGGATTTGG...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCCTGAAGGATTTAGTGTaGGTAGTTCAGAGCTACTCA +
Preference number: 2 (lower is better)
Translates to: LQELDDNKMGAPHTNRMALKDLV*VVQSYS
Trigger: TGAGTAGCTCTGAACTACCCACACTAAATCCTTCAG...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGGGGTACTATTCCCTCTaGACTAAGACACAGAGACAA +
Preference number: 2 (lower is better)
Translates to: RTVPRHLKILKIWTDKAEGYYSL*TKTQRQ
Trigger: TTGTCTCTGTGTCTTAGTCCAGAGGGAATAGTACCC...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGTCAGAATGGGTTGTGTaGCCTCACCCATATTATTTC +
Preference number: 2 (lower is better)
Translates to: RTVPRHLKILKIWTDKAESEWVV*PHPYYF
Trigger: GAAATAATATGGGTGAGGCCACACAACCCATTCTGA...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTATCCTAGTCAAAGGTaGTTGGACATTATTTTCAGG +
Preference number: 2 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIYPSQR*LDIIFR
Trigger: CCTGAAAATAATGTCCAAGCACCTTTGACTAGGATA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCCACGGTTCAGATTATTaGTTATGTCAATATGCACAA +
Preference number: 2 (lower is better)
Translates to: LQELDDNKMGAPHTNRMAHGSDY*LCQYAQ
Trigger: TTGTGCATATTGACATAACCAATAATCTGAACCGTG...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCTCAGTTGACCATTTCTaGCAACTTCACTTATTAACA +
Preference number: 2 (lower is better)
Translates to: LQELDDNKMGAPHTNRMASVDHF*QLHLLT
Trigger: TGTTAATAAGTGAAGTTGCCAGAAATGGTCAACTGA...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGCACGGTTCAGATTATTaGTTATGTCAATATGCACAA +
Preference number: 2 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMHGSDY*LCQYAQ
Trigger: TTGTGCATATTGACATAACCAATAATCTGAACCGTG...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGCTGGATACAGATGAGTaGCACACTCATTTCAAACAC +
Preference number: 2 (lower is better)
Translates to: RISFTKDSPKASKNPKDLLDTDE*HTHFKH
Trigger: GTGTTTGAAATGAGTGTGGCACTCATCTGTATCCAG...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGAACGTCTGTATCCCATaGAAGAAAGGAGGAGATACT +
Preference number: 2 (lower is better)
Translates to: RISFTKDSPKASKNPKDLNVCIP*KKGGDT
Trigger: AGTATCTCCTCCTTTCTTGCATGGGATACAGACGTT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGAGTAGAGGTGGCAGCTaGCTACACTATTTTCCCATA +
Preference number: 2 (lower is better)
Translates to: CSAACTSNEFKITYDHMKSRGGS*LHYFPI
Trigger: TATGGGAAAATAGTGTAGCCAGCTGCCACCTCTACT...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGCTGTCTGCCACTGACTaGAAAATCTATCTTCTACTC +
Preference number: 2 (lower is better)
Translates to: CSAACTSNEFKITYDHMKLSATD*KIYLLL
Trigger: GAGTAGAAGATAGATTTTGCAGTCAGTGGCAGACAG...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGCACACACCAACAGAATaGCCAGAAAACTGTATGTCT +
Preference number: 2 (lower is better)
Translates to: CSAACTSNEFKITYDHMKHTPTE*PENCMS
Trigger: AGACATACAGTTTTCTGGCCATTCTGTTGGTGTGTG...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTGAAATGCTTTGTCTCTaGAGAAGTGTGCACGTTTGT +
Preference number: 2 (lower is better)
Translates to: YQMVALHILCLTFPIRKVEMLCL*RSVHVC
Trigger: ACAAACGTGCACACTTCTGCAGAGACAAAGCATTTC...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGAAACTACACTATTTGTaGCAAGAGTCTGGCCTTAAT +
Preference number: 2 (lower is better)
Translates to: RISFTKDSPKASKNPKDLKLHYL*QESGLN
Trigger: ATTAAGGCCAGACTCTTGCCACAAATAGTGTAGTTT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATCTGAAGGATTTAGTGTaGGTAGTTCAGAGCTACTCA +
Preference number: 2 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNLKDLV*VVQSYS
Trigger: TGAGTAGCTCTGAACTACCCACACTAAATCCTTCAG...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTCATATGACTCTGGTTTaGGAGGACAAAACCCTGAAA +
Preference number: 2 (lower is better)
Translates to: YQMVALHILCLTFPIRKVHMTLV*EDKTLK
Trigger: TTTCAGGGTTTTGTCCTCCCAAACCAGAGTCATATG...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR GCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGAGAAAAAGATCTGAATaGATCTGTTACGTGAAGTAC +
Preference number: 2 (lower is better)
Translates to: CSAACTSNEFKITYDHMKRKRSE*ICYVKY
Trigger: GTACTTCACGTAACAGATGCATTCAGATCTTTTTCT...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CCA 72 bp ACTGCTTTCCATCCAAGTGGTTCTAAATCTTATCATTaGCCGTCCAGACCCCAGACTCGGTCGTTCACAACT +
Preference number: 3 (lower is better)
Translates to: TAFHPSGSKSYH*PSRPQTRSFTT
Trigger: AGTTGTGAACGACCGAGTCTGGGGTCTGGACGGCCAATGATAAGATTTAGAACCACTTGGATGGAAAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CCA 72 bp CGAGTAGGGTTGCTTTCAGACAGACACCACTCAGAATaGGTTGTGTGGCCTCACCCATATTATTTCTGGATA +
Preference number: 3 (lower is better)
Translates to: RVGLLSDRHHSE*VVWPHPYYFWI
Trigger: TATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAACCCTACTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CCA 72 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTaGCCTCACCCATATTATTTCTGGATACAGATGAGT +
Preference number: 3 (lower is better)
Translates to: LLSDRHHSEWVV*PHPYYFWIQMS
Trigger: ACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CAA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTACTATATAACCTCCTaGCTGAGAAGGAGATCACAT +
Preference number: 3 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIYYITS*LRRRSH
Trigger: ATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CAA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGCCAGCCAGAATCTGTTaGATTTCAGGTCACGTGGGA +
Preference number: 3 (lower is better)
Translates to: RISFTKDSPKASKNPKDLPARIC*ISGHVG
Trigger: TCCCACGTGACCTGAAATCAAACAGATTCTGGCTGG...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CAA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACATACTATATAACCTCCTaGCTGAGAAGGAGATCACAT +
Preference number: 3 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTYYITS*LRRRSH
Trigger: ATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTA...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
3UTR-3UTR CAA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATACACGGTTCAGATTATaGGTTATGTCAATATGCACA +
Preference number: 3 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYTRFRL*VMSICT
Trigger: TGTGCATATTGACATAACCAATAATCTGAACCGTGT...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CAA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGCCAGCCAGAATCTGTTaGATTTCAGGTCACGTGGGA +
Preference number: 3 (lower is better)
Translates to: CSAACTSNEFKITYDHMKPARIC*ISGHVG
Trigger: TCCCACGTGACCTGAAATCAAACAGATTCTGGCTGG...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CAA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATCACCTCAGGCCAGCCTaGATAAATAGCAGGAAAGCT +
Preference number: 3 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNHLRPA*INSRKA
Trigger: AGCTTTCCTGCTATTTATCAAGGCTGGCCTGAGGTG...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR-3UTR CAA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGACTAAGGGCCAGTATTaGGCCAATTGGGTACTATTC +
Preference number: 3 (lower is better)
Translates to: CSAACTSNEFKITYDHMKTKGQY*ANWVLF
Trigger: GAATAGTACCCAATTGGCCAAATACTGGCCCTTAGT...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR TCA 72 bp CAGACTACAGAAAAAGATCTGAATGCATCTGTTACGTaGAGTACAATTCAAAACCTGGACGCAACAGTCAAG +
Preference number: 3 (lower is better)
Translates to: QTTEKDLNASVT*STIQNLDATVK
Trigger: CTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGATGCATTCAGATCTTTTTCTGTAGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR GCA 72 bp GATCATAAAAACAAGACTGAAAACGTCTGTATCCCATaGAAGAAAGGAGGAGATACTAAGGGCCAGTATTTG +
Preference number: 3 (lower is better)
Translates to: DHKNKTENVCIP*KKGGDTKGQYL
Trigger: CAAATACTGGCCCTTAGTATCTCCTCCTTTCTTGCATGGGATACAGACGTTTTCAGTCTTGTTTTTATGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CCA 72 bp ACAGACCTTAGTCTGTATCTAAAACTACACTATTTGTaGCAAGAGTCTGGCCTTAATAATATAACAGGCCCC +
Preference number: 3 (lower is better)
Translates to: TDLSLYLKLHYL*QESGLNNITGP
Trigger: GGGGCCTGTTATATTATTAAGGCCAGACTCTTGCCACAAATAGTGTAGTTTTAGATACAGACTAAGGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR GCA 72 bp TTAGAAGCATTTACTGTATACCCAAATCCTACTTCGTaGAACACACAGTGTCACACAAGTAGTGAAAATGTT +
Preference number: 3 (lower is better)
Translates to: LEAFTVYPNPTS*NTQCHTSSENV
Trigger: AACATTTTCACTACTTGTGTGACACTGTGTGTTGCACGAAGTAGGATTTGGGTATACAGTAAATGCTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CCA 72 bp TTAAATGTAAAGCAATCCCGTGATACTTCCACCATGTaGGGCTATACATACAGATTCCATGATACAGTATTT +
Preference number: 3 (lower is better)
Translates to: LNVKQSRDTSTM*GYTYRFHDTVF
Trigger: AAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTTTACATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
3UTR-3UTR CAA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGTTTCCTGAATTAAGTTaGCTGAACACGGTTCAGATT +
Preference number: 3 (lower is better)
Translates to: CSAACTSNEFKITYDHMKFPELS*LNTVQI
Trigger: AATCTGAACCGTGTTCAGCAAACTTAATTCAGGAAA...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR TCA 72 bp AACAGTTTGCTAGGTCTAGTCAAATGTCCCACATTCTaGAGGTATTGTAATTGCTTGCAATTGATAGACAAA +
Preference number: 3 (lower is better)
Translates to: NSLLGLVKCPTF*RYCNCLQLIDK
Trigger: TTTGTCTATCAATTGCAAGCAATTACAATACCTTCAGAATGTGGGACATTTGACTAGACCTAGCAAACTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR GCA 72 bp GAGGATAAATACAATCACACTAGTTTATCAGATGGTTaGACTACACATCCTTTGCCTTACTTTTCCTATAAG +
Preference number: 3 (lower is better)
Translates to: EDKYNHTSLSDG*TTHPLPYFSYK
Trigger: CTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATAAACTAGTGTGATTGTATTTATCCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR TCA 72 bp CTAAAGGCAGAGCTGAGTAGTTTTTACAATGGCATTTaGAGTCCATATGATTCCTGTATTATTTACTATCTG +
Preference number: 3 (lower is better)
Translates to: LKAELSSFYNGI*SPYDSCIIYYL
Trigger: CAGATAGTAAATAATACAGGAATCATATGGACTTCAAATGCCATTGTAAAAACTACTCAGCTCTGCCTTTAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGAGTCGCCAGGACAGCTaGACCGGGCGCCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQSRQDS*TGRPQR
Trigger: CCGCTGTGGGCGCCCGGTCCAGCTGTCCTGGCGACT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGACCACTCTCCTCCCCTaGACTCGCCGGGATGGCGTG +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQTTLLP*TRRDGV
Trigger: CACGCCATCCCGGCGAGTCCAGGGGAGGAGAGTGGT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCACTGACCGCTGTGGCTaGCTGCCCCTTTCGGGATGG +
Preference number: 4 (lower is better)
Translates to: LQELDDNKMGAPHTNRMATDRCG*LPLSGW
Trigger: CCATCCCGAAAGGGGCAGTCAGCCACAGCGGTCAGT...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGGCGGAGTGCGGCAGGTaGAGAGCCAGGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLAECGR*RARCGR
Trigger: TCTTCCGCACCTGGCTCTGCACCTGCCGCACTCCGC...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTACTGACCGCTGTGGCTaGCTGCCCCTTTCGGGATGG +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIITDRCG*LPLSGW
Trigger: CCATCCCGAAAGGGGCAGTCAGCCACAGCGGTCAGT...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCGAGTTCATCAGCCACTaGCCGCTGTGGCTGACTGCC +
Preference number: 4 (lower is better)
Translates to: LQELDDNKMGAPHTNRMAEFISH*PLWLTA
Trigger: GGCAGTCAGCCACAGCGGTCAGTGGCTGATGAACTC...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTAGCACCCCGTATTCCTaGGAGCCGCCACCCGGCATA +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIISTPYS*EPPPGI
Trigger: TATGCCGGGTGGCGGCTCCCAGGAATACGGGGTGCT...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278590.8
CDS-3UTR CCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTGGGATCCGCCAGGCTaGCTCCTGTTGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYWDPPG*LLLLRE
Trigger: CTCCCTGAGCAACAGGAGCCAGCCTGGCGGATCCCA...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACTGACCGCTGTGGCTaGCTGCCCCTTTCGGGATGG +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDTDRCG*LPLSGW
Trigger: CCATCCCGAAAGGGGCAGTCAGCCACAGCGGTCAGT...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGGTGGGTCGGGGGAGCTaGCATAGGACCGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLVGRGS*HRTGHC
Trigger: ACAATGACCGGTCCTATGTCAGCTCCCCCGACCCAC...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATGTGGGTCGGGGGAGCTaGCATAGGACCGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYVGRGS*HRTGHC
Trigger: ACAATGACCGGTCCTATGTCAGCTCCCCCGACCCAC...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGGACTGGGGCCATGTCTaGCAAGAGGGTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMDWGHV*QEGHQG
Trigger: CCCCTGATGACCCTCTTGGCAGACATGGCCCCAGTC...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACAGTCGCCAGGACAGCTaGACCGGGCGCCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANSRQDS*TGRPQR
Trigger: CCGCTGTGGGCGCCCGGTCCAGCTGTCCTGGCGACT...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTTGGGATCCGCCAGGCTaGCTCCTGTTGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPWDPPG*LLLLRE
Trigger: CTCCCTGAGCAACAGGAGCCAGCCTGGCGGATCCCA...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTGAGTTCATCAGCCACTaGCCGCTGTGGCTGACTGCC +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPEFISH*PLWLTA
Trigger: GGCAGTCAGCCACAGCGGTCAGTGGCTGATGAACTC...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTGGGTCGGGGGAGCTaGCATAGGACCGGTCATTGT +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTVGRGS*HRTGHC
Trigger: ACAATGACCGGTCCTATGTCAGCTCCCCCGACCCAC...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTGACTGGGGCCATGTCTaGCAAGAGGGTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPDWGHV*QEGHQG
Trigger: CCCCTGATGACCCTCTTGGCAGACATGGCCCCAGTC...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATGACTGGGGCCATGTCTaGCAAGAGGGTCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDDWGHV*QEGHQG
Trigger: CCCCTGATGACCCTCTTGGCAGACATGGCCCCAGTC...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGCCACGTAGGAGTCACTaGTCCCACAGCTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMPRRSH*SHSSCS
Trigger: GGAGCATGAGCTGTGGGAGCAGTGACTCCTACGTGG...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGGCTGGCTCCTGTTaGTCAGGGAGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPQAGSC*SGRLWK
Trigger: CTTCCAGAGCCTCCCTGAGCAACAGGAGCCAGCCTG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTACCTCGGGGGATCTTaGGGCATTCCACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHYLGGS*GIPQYG
Trigger: CCCATACTGTGGAATGCCGCAAGATCCCCCGAGGTA...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATCTGGACTCGCCGGGATaGCGTGAACACCAGGATTTT +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHLDSPG*REHQDF
Trigger: AAAATCCTGGTGTTCACGCCATCCCGGCGAGTCCAG...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACACCACTCTCCTCCCCTaGACTCGCCGGGATGGCGTG +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHTTLLP*TRRDGV
Trigger: CACGCCATCCCGGCGAGTCCAGGGGAGGAGAGTGGT...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATCTCGCCGGGATGGCGTaGACACCAGGATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDLAGMA*TPGFSP
Trigger: AGGAGAAAATCCTGGTGTTCACGCCATCCCGGCGAG...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGGGAGGCTCTGGAAGGTaGACTGCTCATAACACGGCT +
Preference number: 4 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMGGSGR*TAHNTA
Trigger: AGCCGTGTTATGAGCAGTTCACCTTCCAGAGCCTCC...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGGGAGGCTCTGGAAGGTaGACTGCTCATAACACGGCT +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLGGSGR*TAHNTA
Trigger: AGCCGTGTTATGAGCAGTTCACCTTCCAGAGCCTCC...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCCACGTAGGAGTCACTaGTCCCACAGCTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQPRRSH*SHSSCS
Trigger: GGAGCATGAGCTGTGGGAGCAGTGACTCCTACGTGG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTGCGGAGTGCGGCAGGTaGAGAGCCAGGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCAAECGR*RARCGR
Trigger: TCTTCCGCACCTGGCTCTGCACCTGCCGCACTCCGC...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGCGGAGTGCGGCAGGTaGAGAGCCAGGTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLAECGR*RARCGR
Trigger: TCTTCCGCACCTGGCTCTGCACCTGCCGCACTCCGC...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCAGTCGCCAGGACAGCTaGACCGGGCGCCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEISRQDS*TGRPQR
Trigger: CCGCTGTGGGCGCCCGGTCCAGCTGTCCTGGCGACT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCGCTTGAGTATGTaGGGCTCTAAACAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHLRLSM*GSKQGD
Trigger: GTCTCCCTGTTTAGAGCCTCACATACTCAAGCGCAA...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGTTGCGCTTGAGTATGTaGGGCTCTAAACAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQLRLSM*GSKQGD
Trigger: GTCTCCCTGTTTAGAGCCTCACATACTCAAGCGCAA...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGTGTAAAGCAATCCCGTaGTACTTCCACCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQCKAIP*YFHHVG
Trigger: CCCCACATGGTGGAAGTATCACGGGATTGCTTTACA...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCCTGGTACACGTGCAGTaGAATGCTTTGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LQELDDNKMGAPHTNRMALVHVQ*NALSLQ
Trigger: CTGCAGAGACAAAGCATTTCACTGCACGTGTACCAG...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGAGAGTCACCAGAGCTTaGATTCTCTTCAGACGCCTC +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQRVTRA*ILFRRL
Trigger: GAGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATGCATCAGGTCGGGATTaGTCTTTCCTCCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYASGRD*SFLQAG
Trigger: TCCTGCTTGGAGGAAAGAGCAATCCCGACCTGATGC...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACCGCTGTGGCTGACTaGCCCTTTCGGGATGGTAAT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDTAVAD*PFRDGN
Trigger: ATTACCATCCCGAAAGGGGCAGTCAGCCACAGCGGT...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAACCGCTGTGGCTGACTaGCCCTTTCGGGATGGTAAT +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTTAVAD*PFRDGN
Trigger: ATTACCATCCCGAAAGGGGCAGTCAGCCACAGCGGT...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACATGCTCCCACAGCTCATaGTCCCTTCACTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTCSHSS*SLHCCS
Trigger: ACTGCAGCAGTGAAGGGAGCATGAGCTGTGGGAGCA...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATGTCGAGAGTCAGAGATaGTGTCTATTCTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHVESQR*CLFSWP
Trigger: TGGCCACGAGAATAGACAGCATCTCTGACTCTCGAC...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTATTTCTCCACTAAAATaGCTGCGGCGAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIISPLK*LRRAAG
Trigger: CCCAGCAGCTCGCCGCAGCCATTTTAGTGGAGAAAT...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTGGGTTTTCTACTGTTaGCCAAGGTACAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHWVFYC*PRYSWT
Trigger: AGTCCAGCTGTACCTTGGTCAACAGTAGAAAACCCA...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCTGCAGAGCTGTCTGTaGGTCTTAGTTATCAAGCCT +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQLQSCL*VLVIKP
Trigger: AGGCTTGATAACTAAGACTCACAGACAGCTCTGCAG...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCCCTTATGCTTGGATCTaGTTGCCTCTTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAPYAWI*LPLWST
Trigger: GGTGCTCCAAAGAGGCAATCAGATCCAAGCATAAGG...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTAGAGTCACCAGAGCTTaGATTCTCTTCAGACGCCTC +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIRVTRA*ILFRRL
Trigger: GAGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCT...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATCAGTCCTCCTTCGTTTaGAGTTTTGGCTGCCGTATT +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHQSSFV*SFGCRI
Trigger: AATACGGCAGCCAAAACTGCAAACGAAGGAGGACTG...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTTGCTCCCTTCACTGCTaGAGTCAGAAGCTACGGAAC +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPCSLHC*SQKLRN
Trigger: GTTCCGTAGCTTCTGACTGCAGCAGTGAAGGGAGCA...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGTGCTGTCTATTCTCGTaGCCACCAAGGACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: RTVPRHLKILKIWTDKAECCLFS*PPRTSL
Trigger: TAGGGAGGTCCTTGGTGGCCACGAGAATAGACAGCA...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACATGCTGTCTATTCTCGTaGCCACCAAGGACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTCCLFS*PPRTSL
Trigger: TAGGGAGGTCCTTGGTGGCCACGAGAATAGACAGCA...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAATGGGATCCGCCAGGCTaGCTCCTGTTGCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEWDPPG*LLLLRE
Trigger: CTCCCTGAGCAACAGGAGCCAGCCTGGCGGATCCCA...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCCAAGCCTGGCTCTACTaGAATGCTACCCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAQAWLY*NATQLF
Trigger: GAACAATTGGGTAGCATTTCAGTAGAGCCAGGCTTG...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCAAGCCTGGCTCTACTaGAATGCTACCCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLQAWLY*NATQLF
Trigger: GAACAATTGGGTAGCATTTCAGTAGAGCCAGGCTTG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTTGGAGCACCTCGTTTaGCATCAGAAGTGCTATCAG +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIILEHLV*HQKCYQ
Trigger: CTGATAGCACTTCTGATGTCAAACGAGGTGCTCCAA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCCTTATGCTTGGATCTaGTTGCCTCTTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQPYAWI*LPLWST
Trigger: GGTGCTCCAAAGAGGCAATCAGATCCAAGCATAAGG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTGGCATTGGCGTTCCATaGTTTTTGGTTGCCATCATC +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIGIGVP*FLVAII
Trigger: GATGATGGCAACCAAAAATCATGGAACGCCAATGCC...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTGTAAAGCAATCCCGTaGTACTTCCACCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQCKAIP*YFHHVG
Trigger: CCCCACATGGTGGAAGTATCACGGGATTGCTTTACA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTGTAAAGCAATCCCGTaGTACTTCCACCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDCKAIP*YFHHVG
Trigger: CCCCACATGGTGGAAGTATCACGGGATTGCTTTACA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCTCATTCTACAGCTCTaGACGCAACATCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPLILQL*TQHRCF
Trigger: GAAGCACCGATGTTGCGTTCAGAGCTGTAGAATGAG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAACCCACAGGCCCAATCTaGCCGGCTTCCCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEPTGPI*PASRFC
Trigger: ACAGAAACGGGAAGCCGGTCAGATTGGGCCTGTGGG...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTAACTGTGGGTCAGTaGTCTCCACATAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYLTVGQ*SPHKGG
Trigger: GCCACCTTTATGTGGAGAGCACTGACCCACAGTTAA...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTCAGTCCTCCTTCGTTTaGAGTTTTGGCTGCCGTATT +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIQSSFV*SFGCRI
Trigger: AATACGGCAGCCAAAACTGCAAACGAAGGAGGACTG...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTGCTATCAGCCTTGGTaGTACAAGGAACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIICYQPW*YKEHCC
Trigger: GCAACAGTGTTCCTTGTAGCACCAAGGCTGATAGCA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGTGCTATCAGCCTTGGTaGTACAAGGAACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLCYQPW*YKEHCC
Trigger: GCAACAGTGTTCCTTGTAGCACCAAGGCTGATAGCA...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGGTCGAGAGTCAGAGATaGTGTCTATTCTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RTVPRHLKILKIWTDKAEVESQR*CLFSWP
Trigger: TGGCCACGAGAATAGACAGCATCTCTGACTCTCGAC...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAACAGGCTGGCTCCTGTTaGTCAGGGAGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEQAGSC*SGRLWK
Trigger: CTTCCAGAGCCTCCCTGAGCAACAGGAGCCAGCCTG...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCATACCTCGGGGGATCTTaGGGCATTCCACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSYLGGS*GIPQYG
Trigger: CCCATACTGTGGAATGCCGCAAGATCCCCCGAGGTA...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACTACCTCGGGGGATCTTaGGGCATTCCACAGTATGGG +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHYLGGS*GIPQYG
Trigger: CCCATACTGTGGAATGCCGCAAGATCCCCCGAGGTA...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCGCACCACATCAGGTaGTTTCTTTGCTTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIISHHIR*FLCFLG
Trigger: TCCAAGGAAGCAAAGAAACCACCTGATGTGGTGCGA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCGAAAATTATCCAGACTaGGGCCATGTCTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAENYPD*GHVCQE
Trigger: CTCTTGGCAGACATGGCCCCAGTCTGGATAATTTTC...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTCTTTGATCCTGAGGTaGGAAATGAACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHSLILR*EMNSRW
Trigger: CCATCTGGAGTTCATTTCCCACCTCAGGATCAAAGA...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGTCTTTGATCCTGAGGTaGGAAATGAACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQSLILR*EMNSRW
Trigger: CCATCTGGAGTTCATTTCCCACCTCAGGATCAAAGA...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCAGGATATTGTCCCTGTaGTCTTTGATCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSARILSL*SLILRW
Trigger: CCACCTCAGGATCAAAGACCACAGGGACAATATCCT...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACACTGGTTAAGGGGTCGTaGAAATTCTGCAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTLVKGS*KFCRNG
Trigger: ACCGTTCCTGCAGAATTTCCACGACCCCTTAACCAG...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCTGGTTAAGGGGTCGTaGAAATTCTGCAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQLVKGS*KFCRNG
Trigger: ACCGTTCCTGCAGAATTTCCACGACCCCTTAACCAG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAAGCCTGGCTCTACTaGAATGCTACCCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPQAWLY*NATQLF
Trigger: GAACAATTGGGTAGCATTTCAGTAGAGCCAGGCTTG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGAGTTCATCAGCCACTaGCCGCTGTGGCTGACTGCC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIEFISH*PLWLTA
Trigger: GGCAGTCAGCCACAGCGGTCAGTGGCTGATGAACTC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTTGGAGCACCTCGTTTaGCATCAGAAGTGCTATCAG +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQLEHLV*HQKCYQ
Trigger: CTGATAGCACTTCTGATGTCAAACGAGGTGCTCCAA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATGGCATTGGCGTTCCATaGTTTTTGGTTGCCATCATC +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDGIGVP*FLVAII
Trigger: GATGATGGCAACCAAAAATCATGGAACGCCAATGCC...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCATGCCTTAGAGTGTGCTaGACTTGGAGGAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSCLRVC*TWRRGV
Trigger: TACCCCTCTCCTCCAAGTTCAGCACACTCTAAGGCA...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACTGCCTTAGAGTGTGCTaGACTTGGAGGAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHCLRVC*TWRRGV
Trigger: TACCCCTCTCCTCCAAGTTCAGCACACTCTAAGGCA...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCAGGCTTTCTTTGTCGTaGAGGAGAACTGTCATAAAG +
Preference number: 4 (lower is better)
Translates to: LQELDDNKMGAPHTNRMARLSLS*RRTVIK
Trigger: CTTTATGACAGTTCTCCTTCACGACAAAGAAAGCCT...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACGGAGGCTCTGGAAGGTaGACTGCTCATAACACGGCT +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANGGSGR*TAHNTA
Trigger: AGCCGTGTTATGAGCAGTTCACCTTCCAGAGCCTCC...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTGGGCGTCTGTCATGTaGGGATTCCTTTTCATGACA +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQWASVM*GFLFMT
Trigger: TGTCATGAAAAGGAATCCTCACATGACAGACGCCCA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATACAACTGTCTGCCACTaGCTGCAAAATCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHTTVCH*LQNLSS
Trigger: AGAAGATAGATTTTGCAGTCAGTGGCAGACAGTTGT...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTCCCACAGGCCCAATCTaGCCGGCTTCCCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVPTGPI*PASRFC
Trigger: ACAGAAACGGGAAGCCGGTCAGATTGGGCCTGTGGG...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTTCTACTAGCAGCATATaGCTCTGGTTTGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPSTSSI*LWFGRT
Trigger: TGTCCTCCCAAACCAGAGTCATATGCTGCTAGTAGA...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTCTGTATTCCTGAATaGAAAGCACCCCGTATTCCT +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHFCIPE*KAPRIP
Trigger: AGGAATACGGGGTGCTTTGCATTCAGGAATACAGAA...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTTAACTGTGGGTCAGTaGTCTCCACATAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQLTVGQ*SPHKGG
Trigger: GCCACCTTTATGTGGAGAGCACTGACCCACAGTTAA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATATCAGGTGGTTTCTTTaGTTCCTTGGATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHIRWFL*FLGCSL
Trigger: CAGACTACATCCAAGGAAGCAAAGAAACCACCTGAT...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCGCATCAGGTCGGGATTaGTCTTTCCTCCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFASGRD*SFLQAG
Trigger: TCCTGCTTGGAGGAAAGAGCAATCCCGACCTGATGC...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCGGGATGGTAATATTTaGACTTGTGTCCATAGGTAC +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQRDGNI*TCVHRY
Trigger: GTACCTATGGACACAAGTGCAAATATTACCATCCCG...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTACAAGGAACACTGTTaGTTTTCACCAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHYKEHC*FSPVLL
Trigger: AAGGAGGACTGGTGAAAAGCAACAGTGTTCCTTGTA...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACATGCTATCAGCCTTGGTaGTACAAGGAACACTGTTGC +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTCYQPW*YKEHCC
Trigger: GCAACAGTGTTCCTTGTAGCACCAAGGCTGATAGCA...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATATGCTTGGATCTGATTaGCTCTTTGGAGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDMLGSD*LFGAPR
Trigger: ACGAGGTGCTCCAAAGAGGCAATCAGATCCAAGCAT...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCAGACTTGTGTCCTTATaGTTGGATCTGATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQELDDNKMGAPHTNRMARLVSL*LDLIAS
Trigger: AGAGGCAATCAGATCCAAGCATAAGGACACAAGTCT...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCTCATGCTCCCTTCACTaGTGCAGTCAGAAGCTACGG +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFSCSLH*CSQKLR
Trigger: CCGTAGCTTCTGACTGCAGCAGTGAAGGGAGCATGA...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCAGGCTGGCTCCTGTTaGTCAGGGAGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCQAGSC*SGRLWK
Trigger: CTTCCAGAGCCTCCCTGAGCAACAGGAGCCAGCCTG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCGAAGGAGATCACATGTaGTATTGTAGCAAACCTCCC +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAEGDHM*YCSKPP
Trigger: GGGAGGTTTGCTACAATAGCACATGTGATCTCCTTC...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATCTGTCTGCCACTGACTaGAAAATCTATCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHLSATD*KIYLLL
Trigger: GAGTAGAAGATAGATTTTGCAGTCAGTGGCAGACAG...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGAACGTCTGTATCCCATaGAAGAAAGGAGGAGATACT +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQNVCIP*KKGGDT
Trigger: AGTATCTCCTCCTTTCTTGCATGGGATACAGACGTT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGGAAATGCTTTGTCTCTaGAGAAGTGTGCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQEMLCL*RSVHVC
Trigger: ACAAACGTGCACACTTCTGCAGAGACAAAGCATTTC...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCTGGACTCGCCGGGATaGCGTGAACACCAGGATTTT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCALDSPG*REHQDF
Trigger: AAAATCCTGGTGTTCACGCCATCCCGGCGAGTCCAG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGGAACTTCTTCCATTCTaGCTTCTCATTAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQELLPF*LLISQV
Trigger: GACTTGGCTAATGAGAAGCCAGAATGGAAGAAGTTC...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGGAAAATTATCCAGACTaGGGCCATGTCTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RTVPRHLKILKIWTDKAEENYPD*GHVCQE
Trigger: CTCTTGGCAGACATGGCCCCAGTCTGGATAATTTTC...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGAGGATATTGTCCCTGTaGTCTTTGATCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTVPRHLKILKIWTDKAERILSL*SLILRW
Trigger: CCACCTCAGGATCAAAGACCACAGGGACAATATCCT...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCATAACACGGCTGTGTaGAGTTATCGGGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQHNTAV*SYRARN
Trigger: ATTCCTTGCCCGATAACTCCACACAGCCGTGTTATG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACATTTCTCCACTAAAATaGCTGCGGCGAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHISPLK*LRRAAG
Trigger: CCCAGCAGCTCGCCGCAGCCATTTTAGTGGAGAAAT...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCAAGACACCACTCAGAATaGGTTGTGTGGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSRHHSE*VVWPHP
Trigger: TGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCT...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGAGTAGAGGTGGCAGCTaGCTACACTATTTTCCCATA +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLSRGGS*LHYFPI
Trigger: TATGGGAAAATAGTGTAGCCAGCTGCCACCTCTACT...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCAGTATTTGGCCAATTaGGTACTATTCCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLQYLAN*VLFPLD
Trigger: GTCCAGAGGGAATAGTACCCAATTGGCCAAATACTG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CAA 72 bp CCAAATCAAGGAGAACAATTTCACATGCGAGTAGGGTaGCTTTCAGACAGACACCACTCAGAATGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PNQGEQFHMRVG*LSDRHHSEWVV
Trigger: CACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAACCCTACTCGCATGTGAAATTGTTCTCCTTGATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCGCTACCCAATTGTTCTaGCTCATGATCAGAATTTGT +
Preference number: 4 (lower is better)
Translates to: LQELDDNKMGAPHTNRMAATQLF*LMIRIC
Trigger: ACAAATTCTGATCATGAGTCAGAACAATTGGGTAGC...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCTCGCCGGGATGGCGTaGACACCAGGATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCLAGMA*TPGFSP
Trigger: AGGAGAAAATCCTGGTGTTCACGCCATCCCGGCGAG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATCTCGCCGGGATGGCGTaGACACCAGGATTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNLAGMA*TPGFSP
Trigger: AGGAGAAAATCCTGGTGTTCACGCCATCCCGGCGAG...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGAGGCTTTCTTTGTCGTaGAGGAGAACTGTCATAAAG +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLRLSLS*RRTVIK
Trigger: CTTTATGACAGTTCTCCTTCACGACAAAGAAAGCCT...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCTTTTCTCGGTTGTCTTaGTACCTCGGGGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFFSRLS*YLGGSC
Trigger: GCAAGATCCCCCGAGGTATCAAGACAACCGAGAAAA...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATGAGGATTCCTTTTCATaGCAATTCTCACAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYEDSFS*QFSQGQ
Trigger: CTGACCTTGTGAGAATTGTCATGAAAAGGAATCCTC...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTAACAGGCAAGTGCTGTaGAAGGGTTATTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIINRQVL*KGYFIQ
Trigger: CTGGATAAAATAACCCTTTCACAGCACTTGCCTGTT...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGTCTGTTACAATCTCTTaGATTGGAGATTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQSVTIS*IGDSDL
Trigger: GAGGTCTGAATCTCCAATGCAAGAGATTGTAACAGA...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTCTGTTACAATCTCTTaGATTGGAGATTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHSVTIS*IGDSDL
Trigger: GAGGTCTGAATCTCCAATGCAAGAGATTGTAACAGA...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCCATATGGACAAGGCTaGTTTTTGTGTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLPYGQG*FLCSGT
Trigger: TGTTCCTGAACACAAAAAGCAGCCTTGTCCATATGG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATCCATATGGACAAGGCTaGTTTTTGTGTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYPYGQG*FLCSGT
Trigger: TGTTCCTGAACACAAAAAGCAGCCTTGTCCATATGG...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCTACAAGGAACACTGTTaGTTTTCACCAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAYKEHC*FSPVLL
Trigger: AAGGAGGACTGGTGAAAAGCAACAGTGTTCCTTGTA...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGAGTGCTTTGGGGTTTTaGAGTAGAAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RTVPRHLKILKIWTDKAESALGF*SRSSWD
Trigger: ATCCCAGCTACTTCTACTGCAAAACCCCAAAGCACT...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACTCATGCTCCCTTCACTaGTGCAGTCAGAAGCTACGG +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANSCSLH*CSQKLR
Trigger: CCGTAGCTTCTGACTGCAGCAGTGAAGGGAGCATGA...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCCCACGTAGGAGTCACTaGTCCCACAGCTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIPRRSH*SHSSCS
Trigger: GGAGCATGAGCTGTGGGAGCAGTGACTCCTACGTGG...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATCCAAATCCTACTTCGTaGAACACACAGTGTCACACA +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDPNPTS*NTQCHT
Trigger: TGTGTGACACTGTGTGTTGCACGAAGTAGGATTTGG...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATCTGGATACAGATGAGTaGCACACTCATTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYLDTDE*HTHFKH
Trigger: GTGTTTGAAATGAGTGTGGCACTCATCTGTATCCAG...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCAGTTTATCAGATGGTTaGACTACACATCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LQELDDNKMGAPHTNRMASLSDG*TTHPLP
Trigger: AGGCAAAGGATGTGTAGTGCAACCATCTGATAAACT...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGTCCTTGGATGTAGTCTaGGACTCTTCAGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLSLDVV*DSSGLK
Trigger: CTTTAAACCTGAAGAGTCCCAGACTACATCCAAGGA...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAACTGGACTCGCCGGGATaGCGTGAACACCAGGATTTT +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSELDSPG*REHQDF
Trigger: AAAATCCTGGTGTTCACGCCATCCCGGCGAGTCCAG...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGACACTTCTTTCCATATaGACAAGGCTGCTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQTLLSI*TRLLFV
Trigger: CACAAAAAGCAGCCTTGTCCATATGGAAAGAAGTGT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATACACTTCTTTCCATATaGACAAGGCTGCTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHTLLSI*TRLLFV
Trigger: CACAAAAAGCAGCCTTGTCCATATGGAAAGAAGTGT...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAAAGTGCTATCAGCCTTaGTGCTACAAGGAACACTGT +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTKCYQP*CYKEHC
Trigger: ACAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTT...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTGTAACTTTGCCCTCTaGTTAAGGGGTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQCNFAL*LRGRGN
Trigger: ATTTCCACGACCCCTTAACCAGAGGGCAAAGTTACA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGTCAGAATGGGTTGTGTaGCCTCACCCATATTATTTC +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLSEWVV*PHPYYF
Trigger: GAAATAATATGGGTGAGGCCACACAACCCATTCTGA...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATCTGAAGGATTTAGTGTaGGTAGTTCAGAGCTACTCA +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYLKDLV*VVQSYS
Trigger: TGAGTAGCTCTGAACTACCCACACTAAATCCTTCAG...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATGGGTACTATTCCCTCTaGACTAAGACACAGAGACAA +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDGYYSL*TKTQRQ
Trigger: TTGTCTCTGTGTCTTAGTCCAGAGGGAATAGTACCC...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACACAGTATTTGGCCAATTaGGTACTATTCCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTQYLAN*VLFPLD
Trigger: GTCCAGAGGGAATAGTACCCAATTGGCCAAATACTG...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCTAAGGGCCAGTATTTaGCCAATTGGGTACTATTCC +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPLRASI*PIGYYS
Trigger: GGAATAGTACCCAATTGGCCAAATACTGGCCCTTAG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTCTAAATCTTATCATTaGCCGTCCAGACCCCAGACT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDSKSYH*PSRPQT
Trigger: AGTCTGGGGTCTGGACGGCCAATGATAAGATTTAGA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTCACACACCAACAGAATaGCCAGAAAACTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIHTPTE*PENCMS
Trigger: AGACATACAGTTTTCTGGCCATTCTGTTGGTGTGTG...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCCTGCAGAGCTGTCTGTaGGTCTTAGTTATCAAGCCT +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFLQSCL*VLVIKP
Trigger: AGGCTTGATAACTAAGACTCACAGACAGCTCTGCAG...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATAAATTTCATTGCGCTTaGGTATGTGAGGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYKFHCA*VCEALN
Trigger: GTTTAGAGCCTCACATACTCAAGCGCAATGAAATTT...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACGGTTGCCATCATCATTaGAGGATATTGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHGCHHH*RILSLW
Trigger: CCACAGGGACAATATCCTTCAATGATGATGGCAACC...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATATTTCTGGATACAGATaGGTGCCACACTCATTTCAA +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYISGYR*VPHSFQ
Trigger: TTGAAATGAGTGTGGCACTCATCTGTATCCAGAAAT...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCTCATTCTACAGCTCTaGACGCAACATCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCALILQL*TQHRCF
Trigger: GAAGCACCGATGTTGCGTTCAGAGCTGTAGAATGAG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTGGCGAAAGCTTCAATaGACAGCGTTTTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIWRKLQ*TAFCYS
Trigger: TGAATAACAAAACGCTGTTCATTGAAGCTTTCGCCA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGATTCTTCTTAAGAGATaGACAGGGTTTTGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLILLKR*TGFCPS
Trigger: ACTAGGGCAAAACCCTGTTCATCTCTTAAGAAGAAT...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453089.2
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTTCTGTATTCCTGAATaGAAAGCACCCCGTATTCCT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDFCIPE*KAPRIP
Trigger: AGGAATACGGGGTGCTTTGCATTCAGGAATACAGAA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCTTAACTGTGGGTCAGTaGTCTCCACATAAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFLTVGQ*SPHKGG
Trigger: GCCACCTTTATGTGGAGAGCACTGACCCACAGTTAA...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGCTGGCTCTACTGAAATaGTACCCAATTGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: RTVPRHLKILKIWTDKAELALLK*YPIVLT
Trigger: AGTCAGAACAATTGGGTAGCATTTCAGTAGAGCCAG...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCTGGCTCTACTGAAATaGTACCCAATTGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPLALLK*YPIVLT
Trigger: AGTCAGAACAATTGGGTAGCATTTCAGTAGAGCCAG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGGCATCAGGTCGGGATTaGTCTTTCCTCCAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSAACTSNEFKITYDHMKASGRD*SFLQAG
Trigger: TCCTGCTTGGAGGAAAGAGCAATCCCGACCTGATGC...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCGGGATGGTAATATTTaGACTTGTGTCCATAGGTAC +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPRDGNI*TCVHRY
Trigger: GTACCTATGGACACAAGTGCAAATATTACCATCCCG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTACCGCTGTGGCTGACTaGCCCTTTCGGGATGGTAAT +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVTAVAD*PFRDGN
Trigger: ATTACCATCCCGAAAGGGGCAGTCAGCCACAGCGGT...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTACAAGGAACACTGTTaGTTTTCACCAGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDYKEHC*FSPVLL
Trigger: AAGGAGGACTGGTGAAAAGCAACAGTGTTCCTTGTA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATAGACTTGTGTCCTTATaGTTGGATCTGATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDRLVSL*LDLIAS
Trigger: AGAGGCAATCAGATCCAAGCATAAGGACACAAGTCT...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTGCTCCCACAGCTCATaGTCCCTTCACTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEICSHSS*SLHCCS
Trigger: ACTGCAGCAGTGAAGGGAGCATGAGCTGTGGGAGCA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGTCGAGAGTCAGAGATaGTGTCTATTCTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLVESQR*CLFSWP
Trigger: TGGCCACGAGAATAGACAGCATCTCTGACTCTCGAC...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAAACGTCTGTATCCCATaGAAGAAAGGAGGAGATACT +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTNVCIP*KKGGDT
Trigger: AGTATCTCCTCCTTTCTTGCATGGGATACAGACGTT...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGATAACCTGGTACACGTaGAGTGAAATGCTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQITWYT*SEMLCL
Trigger: GAGACAAAGCATTTCACTGCACGTGTACCAGGTTAT...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAATAACCTGGTACACGTaGAGTGAAATGCTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTITWYT*SEMLCL
Trigger: GAGACAAAGCATTTCACTGCACGTGTACCAGGTTAT...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGTTTCCCACTATATCATaGTCCTTCTCAATCTCGATG +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLFPTIS*SFSISM
Trigger: CATCGAGATTGAGAAGGAGCATGATATAGTGGGAAA...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453089.2
CDS-3UTR GCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTTCTGTATTCCTGAATaGAAAGCACCCCGTATTCGT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDFCIPE*KAPRIR
Trigger: ACGAATACGGGGTGCTTTGCATTCAGGAATACAGAA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528673.5
CDS-3UTR CCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTCCTTGGATGTAGTCTaGGACTCTTCAGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDSLDVV*DSSGLK
Trigger: CTTTAAACCTGAAGAGTCCCAGACTACATCCAAGGA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTAACTCCAGTTTTGTTTaGTATTCTCGCACCACATCA +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIINSSFV*YSRTTS
Trigger: TGATGTGGTGCGAGAATACCAAACAAAACTGGAGTT...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATGAACTTCTTCCATTCTaGCTTCTCATTAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDELLPF*LLISQV
Trigger: GACTTGGCTAATGAGAAGCCAGAATGGAAGAAGTTC...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTACACTTCTTTCCATATaGACAAGGCTGCTTTTTGTG +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIITLLSI*TRLLFV
Trigger: CACAAAAAGCAGCCTTGTCCATATGGAAAGAAGTGT...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGAAAGATGTAGTGCTTTaGGGTTTTGCAGTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQKDVVL*GFAVEV
Trigger: TACTTCTACTGCAAAACCCCAAAGCACTACATCTTT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTGGTTAAGGGGTCGTaGAAATTCTGCAGGAACGGT +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANLVKGS*KFCRNG
Trigger: ACCGTTCCTGCAGAATTTCCACGACCCCTTAACCAG...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCCATAACACGGCTGTGTaGAGTTATCGGGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFHNTAV*SYRARN
Trigger: ATTCCTTGCCCGATAACTCCACACAGCCGTGTTATG...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGAAACTACACTATTTGTaGCAAGAGTCTGGCCTTAAT +
Preference number: 4 (lower is better)
Translates to: NLLAEKEITCAIVANLPQKLHYL*QESGLN
Trigger: ATTAAGGCCAGACTCTTGCCACAAATAGTGTAGTTT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTCAGAATGGGTTGTGTaGCCTCACCCATATTATTTC +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDSEWVV*PHPYYF
Trigger: GAAATAATATGGGTGAGGCCACACAACCCATTCTGA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAAAGACACCACTCAGAATaGGTTGTGTGGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSERHHSE*VVWPHP
Trigger: TGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCT...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCTGAAGGATTTAGTGTaGGTAGTTCAGAGCTACTCA +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQLKDLV*VVQSYS
Trigger: TGAGTAGCTCTGAACTACCCACACTAAATCCTTCAG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCTGCAGAGCTGTCTGTaGGTCTTAGTTATCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCALQSCL*VLVIKP
Trigger: AGGCTTGATAACTAAGACTCACAGACAGCTCTGCAG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTTCCGATGTCGACAGGTaGGTCACATTTTGGATACTG +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCASDVDR*VTFWIL
Trigger: CAGTATCCAAAATGTGACTCACCTGTCGACATCGGA...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGTCCGATGTCGACAGGTaGGTCACATTTTGGATACTG +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLSDVDR*VTFWIL
Trigger: CAGTATCCAAAATGTGACTCACCTGTCGACATCGGA...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTGCCTTAGAGTGTGCTaGACTTGGAGGAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEICLRVC*TWRRGV
Trigger: TACCCCTCTCCTCCAAGTTCAGCACACTCTAAGGCA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCCTACAGAAAAAGATCTaGATGCATCTGTTACGTGAA +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSALQKKI*MHLLRE
Trigger: TTCACGTAACAGATGCATTCAGATCTTTTTCTGTAG...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCAAGTTTTGGCTAAAATaGAGGCTTGTGATCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAKFWLK*RLVISY
Trigger: ATAGCTGATCACAAGCCTTCATTTTAGCCAAAACTT...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTGGCGAAAGCTTCAATaGACAGCGTTTTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDWRKLQ*TAFCYS
Trigger: TGAATAACAAAACGCTGTTCATTGAAGCTTTCGCCA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACGTTTCCATGGCTCATTaGCACATTGCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHVSMAH*HIAAIN
Trigger: ATTGATGGCAGCAATGTGGCAATGAGCCATGGAAAC...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCGTTTCCATGGCTCATTaGCACATTGCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFVSMAH*HIAAIN
Trigger: ATTGATGGCAGCAATGTGGCAATGAGCCATGGAAAC...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGATGCTTGGATCTGATTaGCTCTTTGGAGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLMLGSD*LFGAPR
Trigger: ACGAGGTGCTCCAAAGAGGCAATCAGATCCAAGCAT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATGCTTGGATCTGATTaGCTCTTTGGAGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCAMLGSD*LFGAPR
Trigger: ACGAGGTGCTCCAAAGAGGCAATCAGATCCAAGCAT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTTGCTCCCTTCACTGCTaGAGTCAGAAGCTACGGAAC +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCCSLHC*SQKLRN
Trigger: GTTCCGTAGCTTCTGACTGCAGCAGTGAAGGGAGCA...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTCATGCTCCCTTCACTaGTGCAGTCAGAAGCTACGG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEISCSLH*CSQKLR
Trigger: CCGTAGCTTCTGACTGCAGCAGTGAAGGGAGCATGA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACGAAGGAGATCACATGTaGTATTGTAGCAAACCTCCC +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHEGDHM*YCSKPP
Trigger: GGGAGGTTTGCTACAATAGCACATGTGATCTCCTTC...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATAGAAAAAGATCTGAATaGATCTGTTACGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHRKRSE*ICYVKY
Trigger: GTACTTCACGTAACAGATGCATTCAGATCTTTTTCT...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATGCTGTACCTAAAGTCTaGCAATTATCTCATTCTACA +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYAVPKV*QLSHST
Trigger: TGTAGAATGAGATAATTGGCAGACTTTAGGTACAGC...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCGCACTACACATCCTTTaGCTTACTTTTCCTATAAGA +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAALHIL*LTFPIR
Trigger: TCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGC...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGAACTCCAGTTTTGTTTaGTATTCTCGCACCACATCA +
Preference number: 4 (lower is better)
Translates to: RTVPRHLKILKIWTDKAENSSFV*YSRTTS
Trigger: TGATGTGGTGCGAGAATACCAAACAAAACTGGAGTT...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTTACAATCTCTTGCATTaGAGATTCAGACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPYNLLH*RFRPLR
Trigger: TCTCAGAGGTCTGAATCTCCAATGCAAGAGATTGTA...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTACAATCTCTTGCATTaGAGATTCAGACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQYNLLH*RFRPLR
Trigger: TCTCAGAGGTCTGAATCTCCAATGCAAGAGATTGTA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCCAATTTGTTTTTGGTaGGAAGCTTTTCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLPICFW*EAFLLG
Trigger: ACCTAGAAGAAAAGCTTCCCACCAAAAACAAATTGG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATAAAGATGTAGTGCTTTaGGGTTTTGCAGTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYKDVVL*GFAVEV
Trigger: TACTTCTACTGCAAAACCCCAAAGCACTACATCTTT...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTAGGATATTGTCCCTGTaGTCTTTGATCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCARILSL*SLILRW
Trigger: CCACCTCAGGATCAAAGACCACAGGGACAATATCCT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCTGTTCATAAGGCATTaGCGTTCCATGATTTTTGGT +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQLFIRH*RSMIFG
Trigger: ACCAAAAATCATGGAACGCCAATGCCTTATGAACAG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATAGTATGCATTCAACATaGAATAATATCCGATGTCGA +
Preference number: 4 (lower is better)
Translates to: LLAEKEITCAIVANLPQHSMHST*NNIRCR
Trigger: TCGACATCGGATATTATTCCATGTTGAATGCATACT...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCTTGTGATGGAACTTTaGTTCTTCGTGACTGTAACT +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPLVMEL*FFVTVT
Trigger: AGTTACAGTCACGAAGAACCAAAGTTCCATCACAAG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATTGCTGTCTATTCTCGTaGCCACCAAGGACCTCCCTA +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNCCLFS*PPRTSL
Trigger: TAGGGAGGTCCTTGGTGGCCACGAGAATAGACAGCA...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCATTTCTCCACTAAAATaGCTGCGGCGAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIISPLK*LRRAAG
Trigger: CCCAGCAGCTCGCCGCAGCCATTTTAGTGGAGAAAT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGGTAAAAGGTACTTTCTaGTTTTTCAGGGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMVKGTF*FFRASL
Trigger: AAGTGAAGCCCTGAAAAACCAGAAAGTACCTTTTAC...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGAATGCCTTTTTCCCTTaGAACATACGCTGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQNAFFP*NIRCFK
Trigger: CTTAAAGCAGCGTATGTTCCAAGGGAAAAAGGCATT...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CAA 72 bp ATTTGGAACATAAGCATATGTCCAGCCAGAATCTGTTaGATTTCAGGTCACGTGGGAATTCTCCAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: IWNISICPARIC*ISGHVGILQEL
Trigger: TAACTCCTGGAGAATTCCCACGTGACCTGAAATCAAACAGATTCTGGCTGGACATATGCTTATGTTCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTTTGCGCTTGAGTATGTaGGGCTCTAAACAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVLRLSM*GSKQGD
Trigger: GTCTCCCTGTTTAGAGCCTCACATACTCAAGCGCAA...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCCCTTATGCTTGGATCTaGTTGCCTCTTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIPYAWI*LPLWST
Trigger: GGTGCTCCAAAGAGGCAATCAGATCCAAGCATAAGG...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGGGTTGCCATCATCATTaGAGGATATTGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CSAACTSNEFKITYDHMKGCHHH*RILSLW
Trigger: CCACAGGGACAATATCCTTCAATGATGATGGCAACC...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCAGGCTTTCTTTGTCGTaGAGGAGAACTGTCATAAAG +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFRLSLS*RRTVIK
Trigger: CTTTATGACAGTTCTCCTTCACGACAAAGAAAGCCT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTTTTTCTCGGTTGTCTTaGTACCTCGGGGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCFSRLS*YLGGSC
Trigger: GCAAGATCCCCCGAGGTATCAAGACAACCGAGAAAA...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTTTTCTCGGTTGTCTTaGTACCTCGGGGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIFSRLS*YLGGSC
Trigger: GCAAGATCCCCCGAGGTATCAAGACAACCGAGAAAA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACGAGGATTCCTTTTCATaGCAATTCTCACAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHEDSFS*QFSQGQ
Trigger: CTGACCTTGTGAGAATTGTCATGAAAAGGAATCCTC...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACAACTGTCTGCCACTaGCTGCAAAATCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFTTVCH*LQNLSS
Trigger: AGAAGATAGATTTTGCAGTCAGTGGCAGACAGTTGT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTGACGCAACAGTCAAGTaGTGTCAATCACACAACTGT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCADATVK*CQSHNC
Trigger: ACAGTTGTGTGATTGACATCACTTGACTGTTGCGTC...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCCTGGTACACGTGCAGTaGAATGCTTTGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEILVHVQ*NALSLQ
Trigger: CTGCAGAGACAAAGCATTTCACTGCACGTGTACCAG...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAATCTACTAGCAGCATATaGCTCTGGTTTGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSESTSSI*LWFGRT
Trigger: TGTCCTCCCAAACCAGAGTCATATGCTGCTAGTAGA...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCAGAGTCACCAGAGCTTaGATTCTCTTCAGACGCCTC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIRVTRA*ILFRRL
Trigger: GAGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCATCAGGTGGTTTCTTTaGTTCCTTGGATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFIRWFL*FLGCSL
Trigger: CAGACTACATCCAAGGAAGCAAAGAAACCACCTGAT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCCCATATGGACAAGGCTaGTTTTTGTGTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFPYGQG*FLCSGT
Trigger: TGTTCCTGAACACAAAAAGCAGCCTTGTCCATATGG...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGTTTGCAGTTTTGGCTaGCGTATTTCTAGACATGGC +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLVCSFG*RISRHG
Trigger: GCCATGTCTAGAAATACGGCAGCCAAAACTGCAAAC...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAACAGTCCTCCTTCGTTTaGAGTTTTGGCTGCCGTATT +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEQSSFV*SFGCRI
Trigger: AATACGGCAGCCAAAACTGCAAACGAAGGAGGACTG...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACAGTGCTTTGGGGTTTTaGAGTAGAAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANSALGF*SRSSWD
Trigger: ATCCCAGCTACTTCTACTGCAAAACCCCAAAGCACT...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACGAAGGAGATCACATGTaGTATTGTAGCAAACCTCCC +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANEGDHM*YCSKPP
Trigger: GGGAGGTTTGCTACAATAGCACATGTGATCTCCTTC...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGCCAAATCCTACTTCGTaGAACACACAGTGTCACACA +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLPNPTS*NTQCHT
Trigger: TGTGTGACACTGTGTGTTGCACGAAGTAGGATTTGG...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCAGTTACATTGTAACATaGCACTCACATTATAGCTAC +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSASYIVT*HSHYSY
Trigger: GTAGCTATAATGTGAGTGGCATGTTACAATGTAACT...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGACGATTGCTTTTCAATaGCTTTTTCCCTTGGAACAT +
Preference number: 4 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQTIAFQ*LFPLEH
Trigger: ATGTTCCAAGGGAAAAAGGCATTGAAAAGCAATCGT...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCAGAAATGCTTTGTCTCTaGAGAAGTGTGCACGTTTGT +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSEMLCL*RSVHVC
Trigger: ACAAACGTGCACACTTCTGCAGAGACAAAGCATTTC...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTCAAGAGAGTATCATCTaGCATTTTTCAGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIQESII*HFSDEE
Trigger: TTCTTCATCTGAAAAATGGCAGATGATACTCTCTTG...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453089.2
CDS-3UTR CCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACAAGTGCTATCAGCCTTaGTGCTACAAGGAACACTGT +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANKCYQP*CYKEHC
Trigger: ACAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTT...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGAAGTGCTATCAGCCTTaGTGCTACAAGGAACACTGT +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLKCYQP*CYKEHC
Trigger: ACAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATCCAATTTGTTTTTGGTaGGAAGCTTTTCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDPICFW*EAFLLG
Trigger: ACCTAGAAGAAAAGCTTCCCACCAAAAACAAATTGG...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCAGTTGACCATTTCTaGCAACTTCACTTATTAACA +
Preference number: 4 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIISVDHF*QLHLLT
Trigger: TGTTAATAAGTGAAGTTGCCAGAAATGGTCAACTGA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCACACACACCAACAGAATaGCCAGAAAACTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSHTPTE*PENCMS
Trigger: AGACATACAGTTTTCTGGCCATTCTGTTGGTGTGTG...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGATAAAATCAATAACCTaGTACACGTGCAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLIKSIT*YTCSEM
Trigger: CATTTCACTGCACGTGTACCAGGTTATTGATTTTAT...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCCATATGACTCTGGTTTaGGAGGACAAAACCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFHMTLV*EDKTLK
Trigger: TTTCAGGGTTTTGTCCTCCCAAACCAGAGTCATATG...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCCTTCTCAATCTCGATaGATCAGATTTTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: LAEKEITCAIVANLPQHLPSQSR*IRFFYF
Trigger: AAAGTAGAAAAATCTGATCCATCGAGATTGAGAAGG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453089.2
CDS-3UTR CCA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCAGATTTCTGTCTCAATaGAGAAGTCAGAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSARFLSQ*RSQKRI
Trigger: AATTCTCTTCTGACTTCTCCATTGAGACAGAAATCT...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453089.2
CDS-3UTR TCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATTGGGTTTTCTACTGTTaGCCAAGGTACAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNWVFYC*PRYSWT
Trigger: AGTCCAGCTGTACCTTGGTCAACAGTAGAAAACCCA...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTGGGTTTTCTACTGTTaGCCAAGGTACAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIWVFYC*PRYSWT
Trigger: AGTCCAGCTGTACCTTGGTCAACAGTAGAAAACCCA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCAAATTTCATTGCGCTTaGGTATGTGAGGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFKFHCA*VCEALN
Trigger: GTTTAGAGCCTCACATACTCAAGCGCAATGAAATTT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGGTTGCCATCATCATTaGAGGATATTGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIGCHHH*RILSLW
Trigger: CCACAGGGACAATATCCTTCAATGATGATGGCAACC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGGCATTGGCGTTCCATaGTTTTTGGTTGCCATCATC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIGIGVP*FLVAII
Trigger: GATGATGGCAACCAAAAATCATGGAACGCCAATGCC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGAGGATTCCTTTTCATaGCAATTCTCACAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLEDSFS*QFSQGQ
Trigger: CTGACCTTGTGAGAATTGTCATGAAAAGGAATCCTC...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTGGGCGTCTGTCATGTaGGGATTCCTTTTCATGACA +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIWASVM*GFLFMT
Trigger: TGTCATGAAAAGGAATCCTCACATGACAGACGCCCA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTTGGGCGTCTGTCATGTaGGGATTCCTTTTCATGACA +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVWASVM*GFLFMT
Trigger: TGTCATGAAAAGGAATCCTCACATGACAGACGCCCA...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACATTTCTGGATACAGATaGGTGCCACACTCATTTCAA +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHISGYR*VPHSFQ
Trigger: TTGAAATGAGTGTGGCACTCATCTGTATCCAGAAAT...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACATCAGGTGGTTTCTTTaGTTCCTTGGATGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANIRWFL*FLGCSL
Trigger: CAGACTACATCCAAGGAAGCAAAGAAACCACCTGAT...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTAGACTTGTGTCCTTATaGTTGGATCTGATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCARLVSL*LDLIAS
Trigger: AGAGGCAATCAGATCCAAGCATAAGGACACAAGTCT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACTACAATCTCTTGCATTaGAGATTCAGACCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHYNLLH*RFRPLR
Trigger: TCTCAGAGGTCTGAATCTCCAATGCAAGAGATTGTA...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGAAAATTATCCAGACTaGGGCCATGTCTGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIENYPD*GHVCQE
Trigger: CTCTTGGCAGACATGGCCCCAGTCTGGATAATTTTC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACGCGTTCCATGATTTTTaGTTGCCATCATCATTGAAG +
Preference number: 4 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHAFHDF*LPSSLK
Trigger: CTTCAATGATGATGGCAACCAAAAATCATGGAACGC...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCCATAACACGGCTGTGTaGAGTTATCGGGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIHNTAV*SYRARN
Trigger: ATTCCTTGCCCGATAACTCCACACAGCCGTGTTATG...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCACACCCATATTATTTCTaGATACAGATGAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSHPYYF*IQMSAT
Trigger: TGTGGCACTCATCTGTATCCAGAAATAATATGGGTG...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAAAGTAGAGGTGGCAGCTaGCTACACTATTTTCCCATA +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSESRGGS*LHYFPI
Trigger: TATGGGAAAATAGTGTAGCCAGCTGCCACCTCTACT...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTAAAATCCTAAAGATCTaGACAGACAAAGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPKILKI*TDKAEI
Trigger: TATCTCTGCTTTGTCTGTCCAGATCTTTAGGATTTT...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTATAAAATCAATAACCTaGTACACGTGCAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: YNLLAEKEITCAIVANLPIKSIT*YTCSEM
Trigger: CATTTCACTGCACGTGTACCAGGTTATTGATTTTAT...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACAAATTTCATTGCGCTTaGGTATGTGAGGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: ILYNLLAEKEITCAIVANKFHCA*VCEALN
Trigger: GTTTAGAGCCTCACATACTCAAGCGCAATGAAATTT...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR TCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATGACGCAACAGTCAAGTaGTGTCAATCACACAACTGT +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNDATVK*CQSHNC
Trigger: ACAGTTGTGTGATTGACATCACTTGACTGTTGCGTC...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCACTAACAATCCTCTTTTaGAGGACATCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSLTILF*RTSKTT
Trigger: GGTAGTTTTTGATGTCCTTCAAAAGAGGATTGTTAG...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTGTTTCCATGGCTCATTaGCACATTGCTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVVSMAH*HIAAIN
Trigger: ATTGATGGCAGCAATGTGGCAATGAGCCATGGAAAC...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGTTTGCAGTTTTGGCTaGCGTATTTCTAGACATGGC +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCVCSFG*RISRHG
Trigger: GCCATGTCTAGAAATACGGCAGCCAAAACTGCAAAC...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGTTTGCAGTTTTGGCTaGCGTATTTCTAGACATGGC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIVCSFG*RISRHG
Trigger: GCCATGTCTAGAAATACGGCAGCCAAAACTGCAAAC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTAGTGCTTTGGGGTTTTaGAGTAGAAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCSALGF*SRSSWD
Trigger: ATCCCAGCTACTTCTACTGCAAAACCCCAAAGCACT...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCTATCCTAGTCAAAGGTaGTTGGACATTATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFYPSQR*LDIIFR
Trigger: CCTGAAAATAATGTCCAAGCACCTTTGACTAGGATA...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCGCTGTACCTAAAGTCTaGCAATTATCTCATTCTACA +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFAVPKV*QLSHST
Trigger: TGTAGAATGAGATAATTGGCAGACTTTAGGTACAGC...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGTCTCTGCAGAAGTGTaGACGTTTGTGAATATTTCA +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLVSAEV*TFVNIS
Trigger: TGAAATATTCACAAACGTGCACACTTCTGCAGAGAC...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCAGCACTACACATCCTTTaGCTTACTTTTCCTATAAGA +
Preference number: 4 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSALHIL*LTFPIR
Trigger: TCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGC...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGAGTTTATCAGATGGTTaGACTACACATCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLSLSDG*TTHPLP
Trigger: AGGCAAAGGATGTGTAGTGCAACCATCTGATAAACT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTAACTCCAGTTTTGTTTaGTATTCTCGCACCACATCA +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCANSSFV*YSRTTS
Trigger: TGATGTGGTGCGAGAATACCAAACAAAACTGGAGTT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAAGAACTTCTTCCATTCTaGCTTCTCATTAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEELLPF*LLISQV
Trigger: GACTTGGCTAATGAGAAGCCAGAATGGAAGAAGTTC...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTCTTTGATCCTGAGGTaGGAAATGAACTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEISLILR*EMNSRW
Trigger: CCATCTGGAGTTCATTTCCCACCTCAGGATCAAAGA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTGCGTTCCATGATTTTTaGTTGCCATCATCATTGAAG +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCAAFHDF*LPSSLK
Trigger: CTTCAATGATGATGGCAACCAAAAATCATGGAACGC...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGCTGTTCATAAGGCATTaGCGTTCCATGATTTTTGGT +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLLFIRH*RSMIFG
Trigger: ACCAAAAATCATGGAACGCCAATGCCTTATGAACAG...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATTGTAACTTTGCCCTCTaGTTAAGGGGTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNCNFAL*LRGRGN
Trigger: ATTTCCACGACCCCTTAACCAGAGGGCAAAGTTACA...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTGTACAATTCAAAACCTaGACGCAACAGTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCAVQFKT*TQQSSD
Trigger: ATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTAC...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGGGTACTATTCCCTCTaGACTAAGACACAGAGACAA +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCGYYSL*TKTQRQ
Trigger: TTGTCTCTGTGTCTTAGTCCAGAGGGAATAGTACCC...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCTAAGGGCCAGTATTTaGCCAATTGGGTACTATTCC +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCLRASI*PIGYYS
Trigger: GGAATAGTACCCAATTGGCCAAATACTGGCCCTTAG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTTCTAAATCTTATCATTaGCCGTCCAGACCCCAGACT +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCSKSYH*PSRPQT
Trigger: AGTCTGGGGTCTGGACGGCCAATGATAAGATTTAGA...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
3UTR CAA 72 bp CACACTAGTTTATCAGATGGTTGCACTACACATCCTTaGCCTTACTTTTCCTATAAGAAAAGTTCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HTSLSDGCTTHP*PYFSYKKSSQD
Trigger: ATCCTGCGAACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATAAACTAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAAGCTACCCAATTGTTCTaGCTCATGATCAGAATTTGT +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEATQLF*LMIRIC
Trigger: ACAAATTCTGATCATGAGTCAGAACAATTGGGTAGC...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCAACAGGCAAGTGCTGTaGAAGGGTTATTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEINRQVL*KGYFIQ
Trigger: CTGGATAAAATAACCCTTTCACAGCACTTGCCTGTT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCTACAGAAAAAGATCTaGATGCATCTGTTACGTGAA +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCALQKKI*MHLLRE
Trigger: TTCACGTAACAGATGCATTCAGATCTTTTTCTGTAG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTAAGTTTTGGCTAAAATaGAGGCTTGTGATCAGCTAT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCAKFWLK*RLVISY
Trigger: ATAGCTGATCACAAGCCTTCATTTTAGCCAAAACTT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCTAACAATCCTCTTTTaGAGGACATCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCALTILF*RTSKTT
Trigger: GGTAGTTTTTGATGTCCTTCAAAAGAGGATTGTTAG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCTGGCTCTACTGAAATaGTACCCAATTGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCLALLK*YPIVLT
Trigger: AGTCAGAACAATTGGGTAGCATTTCAGTAGAGCCAG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGTCTGTTACAATCTCTTaGATTGGAGATTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: CSAACTSNEFKITYDHMKSVTIS*IGDSDL
Trigger: GAGGTCTGAATCTCCAATGCAAGAGATTGTAACAGA...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCCGGGATGGTAATATTTaGACTTGTGTCCATAGGTAC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIRDGNI*TCVHRY
Trigger: GTACCTATGGACACAAGTGCAAATATTACCATCCCG...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR GCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTCTGTCTGCCACTGACTaGAAAATCTATCTTCTACTC +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVLSATD*KIYLLL
Trigger: GAGTAGAAGATAGATTTTGCAGTCAGTGGCAGACAG...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTTATCCTAGTCAAAGGTaGTTGGACATTATTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCAYPSQR*LDIIFR
Trigger: CCTGAAAATAATGTCCAAGCACCTTTGACTAGGATA...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATCTGGATACAGATGAGTaGCACACTCATTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNLDTDE*HTHFKH
Trigger: GTGTTTGAAATGAGTGTGGCACTCATCTGTATCCAG...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTCCTTGGATGTAGTCTaGGACTCTTCAGGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEISLDVV*DSSGLK
Trigger: CTTTAAACCTGAAGAGTCCCAGACTACATCCAAGGA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGACTGTAATGTCTTTGTaGCCTCTTTCCAAAAACCAA +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLTVMSL*PLSKNQ
Trigger: TTGGTTTTTGGAAAGAGGCCACAAAGACATTACAGT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCAGTATGCATTCAACATaGAATAATATCCGATGTCGA +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFSMHST*NNIRCR
Trigger: TCGACATCGGATATTATTCCATGTTGAATGCATACT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTAAACTACACTATTTGTaGCAAGAGTCTGGCCTTAAT +
Preference number: 4 (lower is better)
Translates to: SHKWILYNLLAEKEITCAKLHYL*QESGLN
Trigger: ATTAAGGCCAGACTCTTGCCACAAATAGTGTAGTTT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAACACCCATATTATTTCTaGATACAGATGAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEHPYYF*IQMSAT
Trigger: TGTGGCACTCATCTGTATCCAGAAATAATATGGGTG...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACTTGGACAGAAAATTaGCAAATTTGGTACATGGTT +
Preference number: 4 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFTWTEN*QIWYMV
Trigger: AACCATGTACCAAATTTGCCAATTTTCTGTCCAAGT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAAAAAGATGTAGTGCTTTaGGGTTTTGCAGTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEKDVVL*GFAVEV
Trigger: TACTTCTACTGCAAAACCCCAAAGCACTACATCTTT...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCGTTCCATGATTTTTaGTTGCCATCATCATTGAAG +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCAFHDF*LPSSLK
Trigger: CTTCAATGATGATGGCAACCAAAAATCATGGAACGC...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCTGTTCATAAGGCATTaGCGTTCCATGATTTTTGGT +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCLFIRH*RSMIFG
Trigger: ACCAAAAATCATGGAACGCCAATGCCTTATGAACAG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTCTTGTGATGGAACTTTaGTTCTTCGTGACTGTAACT +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVLVMEL*FFVTVT
Trigger: AGTTACAGTCACGAAGAACCAAAGTTCCATCACAAG...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGTACAATTCAAAACCTaGACGCAACAGTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCVQFKT*TQQSSD
Trigger: ATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTAC...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAAGTAAAAGGTACTTTCTaGTTTTTCAGGGCTTCACTT +
Preference number: 4 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEVKGTF*FFRASL
Trigger: AAGTGAAGCCCTGAAAAACCAGAAAGTACCTTTTAC...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGACTTGGACAGAAAATTaGCAAATTTGGTACATGGTT +
Preference number: 4 (lower is better)
Translates to: RISFTKDSPKASKNPKDLTWTEN*QIWYMV
Trigger: AACCATGTACCAAATTTGCCAATTTTCTGTCCAAGT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTAATGCCTTTTTCCCTTaGAACATACGCTGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCNAFFP*NIRCFK
Trigger: CTTAAAGCAGCGTATGTTCCAAGGGAAAAAGGCATT...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCAGAATACCACTTTCCTaGATTAAGTTTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIRIPLS*IKFAEH
Trigger: GTGTTCAGCAAACTTAATTCAGGAAAGTGGTATTCT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR TCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATAGAATACCACTTTCCTaGATTAAGTTTGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNRIPLS*IKFAEH
Trigger: GTGTTCAGCAAACTTAATTCAGGAAAGTGGTATTCT...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATACGATTGCTTTTCAATaGCTTTTTCCCTTGGAACAT +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNTIAFQ*LFPLEH
Trigger: ATGTTCCAAGGGAAAAAGGCATTGAAAAGCAATCGT...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTACTGTAATGTCTTTGTaGCCTCTTTCCAAAAACCAA +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCTVMSL*PLSKNQ
Trigger: TTGGTTTTTGGAAAGAGGCCACAAAGACATTACAGT...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACTGTAATGTCTTTGTaGCCTCTTTCCAAAAACCAA +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEITVMSL*PLSKNQ
Trigger: TTGGTTTTTGGAAAGAGGCCACAAAGACATTACAGT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATCCAATTTGTTTTTGGTaGGAAGCTTTTCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNPICFW*EAFLLG
Trigger: ACCTAGAAGAAAAGCTTCCCACCAAAAACAAATTGG...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCAGAAAAAGATCTGAATaGATCTGTTACGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIRKRSE*ICYVKY
Trigger: GTACTTCACGTAACAGATGCATTCAGATCTTTTTCT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR GCA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTAGTTACATTGTAACATaGCACTCACATTATAGCTAC +
Preference number: 4 (lower is better)
Translates to: YQMVALHILCLTFPIRKVSYIVT*HSHYSY
Trigger: GTAGCTATAATGTGAGTGGCATGTTACAATGTAACT...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATAGTATGCATTCAACATaGAATAATATCCGATGTCGA +
Preference number: 4 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNSMHST*NNIRCR
Trigger: TCGACATCGGATATTATTCCATGTTGAATGCATACT...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCACGGTTCAGATTATTaGTTATGTCAATATGCACAA +
Preference number: 4 (lower is better)
Translates to: ISHKWILYNLLAEKEITCHGSDY*LCQYAQ
Trigger: TTGTGCATATTGACATAACCAATAATCTGAACCGTG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CCA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCAAAATCCTAAAGATCTaGACAGACAAAGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: YSISHKWILYNLLAEKEIKILKI*TDKAEI
Trigger: TATCTCTGCTTTGTCTGTCCAGATCTTTAGGATTTT...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS CCA 90 bp CCTCGGGGGATCTTGCGGCATTCCACAGTATGGGATCCGCCAGGCTaGCTCCTGTTGCTCAGGGAGGCTCTGGAAGGTGAACTGCTCATA +
Preference number: 5 (lower is better)
Translates to: PRGILRHSTVWDPPG*LLLLREALEGELLI
Trigger: TATGAGCAGTTCACCTTCCAGAGCCTCCCTGAGCAACAGGAGCCAGCCTGGCGGATCCCATACTGTGGAATGCCGCAAGATCCCCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 90 bp TGTGTTGACACTTCAAATTCTCCTCTAGCTGTGGGTCGGGGGAGCTaGCATAGGACCGGTCATTGTAACCCACGTAGGAGTCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: CVDTSNSPLAVGRGS*HRTGHCNPRRSHCS
Trigger: GGAGCAGTGACTCCTACGTGGGTTACAATGACCGGTCCTATGTCAGCTCCCCCGACCCACAGCTAGAGGAGAATTTGAAGTGTCAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 90 bp TTTCTACTGTTGACCAAGGTACAGCTGGACTTAACTGTGGGTCAGTaGTCTCCACATAAAGGTGGCCGAGGTCATGCCCTAGGTGATCCT +
Preference number: 5 (lower is better)
Translates to: FLLLTKVQLDLTVGQ*SPHKGGRGHALGDP
Trigger: AGGATCACCTAGGGCATGACCTCGGCCACCTTTATGTGGAGAGCACTGACCCACAGTTAAGTCCAGCTGTACCTTGGTCAACAGTAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 90 bp ACCGGTCATTGTAACCCACGTAGGAGTCACTGCTCCCACAGCTCATaGTCCCTTCACTGCTGCAGTCAGAAGCTACGGAACTTATTCTAT +
Preference number: 5 (lower is better)
Translates to: TGHCNPRRSHCSHSS*SLHCCSQKLRNLFY
Trigger: ATAGAATAAGTTCCGTAGCTTCTGACTGCAGCAGTGAAGGGAGCATGAGCTGTGGGAGCAGTGACTCCTACGTGGGTTACAATGACCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGAGCATCAGGTCGGGATaGCTCTTTCCTCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQSIRSG*LFPPSR
Trigger: CCTGCTTGGAGGAAAGAGCAATCCCGACCTGATGCT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 90 bp CCAGCTTCCCAGGCCTTCCTGGCGGGAATAAGGCTTTCTTTGTCGTaGAGGAGAACTGTCATAAAGTCGAGAGTCAGAGATGCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: PASQAFLAGIRLSLS*RRTVIKSRVRDAVY
Trigger: ATAGACAGCATCTCTGACTCTCGACTTTATGACAGTTCTCCTTCACGACAAAGAAAGCCTTATTCCCGCCAGGAAGGCCTGGGAAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 90 bp CCACTGACCGCTGTGGCTGACTGCCCCTTTCGGGATGGTAATATTTaGACTTGTGTCCATAGGTACACTTCTTTCCATATGGACAAGGCT +
Preference number: 5 (lower is better)
Translates to: PLTAVADCPFRDGNI*TCVHRYTSFHMDKA
Trigger: AGCCTTGTCCATATGGAAAGAAGTGTACCTATGGACACAAGTGCAAATATTACCATCCCGAAAGGGGCAGTCAGCCACAGCGGTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 90 bp TTCTTTGTCGTGAAGGAGAACTGTCATAAAGTCGAGAGTCAGAGATaGTGTCTATTCTCGTGGCCACCAAGGACCTCCCTAGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: FFVVKENCHKVESQR*CLFSWPPRTSLGVV
Trigger: CACCACACCTAGGGAGGTCCTTGGTGGCCACGAGAATAGACAGCATCTCTGACTCTCGACTTTATGACAGTTCTCCTTCACGACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 90 bp GATGCATCATCTTTCAATAACCCAGCTGGGATTTCTCCACTAAAATaGCTGCGGCGAGCTGCTGGGCGTCTGTCATGTGAGGATTCCTTT +
Preference number: 5 (lower is better)
Translates to: DASSFNNPAGISPLK*LRRAAGRLSCEDSF
Trigger: AAAGGAATCCTCACATGACAGACGCCCAGCAGCTCGCCGCAGCCATTTTAGTGGAGAAATCCCAGCTGGGTTATTGAAAGATGATGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCACATGCGAGTAGGGTaGCTTTCAGACAGACACCAC +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQHMRVG*LSDRHH
Trigger: GTGGTGTCTGTCTGAAAGCAACCCTACTCGCATGTG...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATCCAGTCCTCCTTCGTTaGCAGTTTTGGCTGCCGTAT +
Preference number: 5 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYPVLLR*QFWLPY
Trigger: ATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGG...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCCAGTCCTCCTTCGTTaGCAGTTTTGGCTGCCGTAT +
Preference number: 5 (lower is better)
Translates to: LAEKEITCAIVANLPQHLPVLLR*QFWLPY
Trigger: ATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGTTGTCCCTGTGGTCTTaGATCCTGAGGTGGGAAATG +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQLSLWS*ILRWEM
Trigger: CATTTCCCACCTCAGGATCAAAGACCACAGGGACAA...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCATTCTGCAGGAACGGTaGAGGATTAAGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAILQER*RIKAAV
Trigger: CACAGCCGCCTTAATCCTCAACCGTTCCTGCAGAAT...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGATACCTCGGGGGATCTaGCGGCATTCCACAGTATGG +
Preference number: 5 (lower is better)
Translates to: RTVPRHLKILKIWTDKAEIPRGI*RHSTVW
Trigger: CCATACTGTGGAATGCCGCAAGATCCCCCGAGGTAT...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAATACCTCGGGGGATCTaGCGGCATTCCACAGTATGG +
Preference number: 5 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTIPRGI*RHSTVW
Trigger: CCATACTGTGGAATGCCGCAAGATCCCCCGAGGTAT...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATCACATGCGAGTAGGGTaGCTTTCAGACAGACACCAC +
Preference number: 5 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYHMRVG*LSDRHH
Trigger: GTGGTGTCTGTCTGAAAGCAACCCTACTCGCATGTG...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS TCA 90 bp GTGTCCTTATGCTTGGATCTGATTGCCTCTTTGGAGCACCTCGTTTaGCATCAGAAGTGCTATCAGCCTTGGTGCTACAAGGAACACTGT +
Preference number: 5 (lower is better)
Translates to: VSLCLDLIASLEHLV*HQKCYQPWCYKEHC
Trigger: ACAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTTCTGATGTCAAACGAGGTGCTCCAAAGAGGCAATCAGATCCAAGCATAAGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCAGAGTCACCAGAGCTaGCATTCTCTTCAGACGCCT +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQQSHQS*HSLQTP
Trigger: AGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCTG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGGGTTTCTTTGCTTCCTaGGATGTAGTCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQGFFAS*DVVWDS
Trigger: AGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACC...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCCCTTCGTTTGCAGTTTaGGCTGCCGTATTTCTAGAC +
Preference number: 5 (lower is better)
Translates to: LQELDDNKMGAPHTNRMAPSFAV*AAVFLD
Trigger: GTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGG...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATCCAGTCCTCCTTCGTTaGCAGTTTTGGCTGCCGTAT +
Preference number: 5 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDPVLLR*QFWLPY
Trigger: ATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGG...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTGAAGTGCTATCAGCCTaGGTGCTACAAGGAACACTG +
Preference number: 5 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIEVLSA*VLQGTL
Trigger: CAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTTC...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATGTGAGGGTGCATGTGTaGACACTTCAAATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLAEKEITCAIVANLPQHVRVHV*TLQILL
Trigger: GAGGAGAATTTGAAGTGTCAACACATGCACCCTCAC...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGACCACTCAGAATGGGTaGTGTGGCCTCACCCATATT +
Preference number: 5 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMTTQNG*CGLTHI
Trigger: AATATGGGTGAGGCCACACAACCCATTCTGAGTGGT...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATGCATATGACTCTGGTTaGGGAGGACAAAACCCTGAA +
Preference number: 5 (lower is better)
Translates to: LLAEKEITCAIVANLPQHAYDSG*GGQNPE
Trigger: TTCAGGGTTTTGTCCTCCCAAACCAGAGTCATATGC...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGTCCCTCCTAACACCCTaGCCAAGAGAGTATCATCTG +
Preference number: 5 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMSLLTP*PREYHL
Trigger: CAGATGATACTCTCTTGGCAAGGGTGTTAGGAGGGA...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453089.2
CDS-3UTR CAA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTGGGTTTTCTACTGTaGACCAAGGTACAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYLGFLL*TKVQLD
Trigger: GTCCAGCTGTACCTTGGTCAACAGTAGAAAACCCAA...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGTTGGGTTTTCTACTGTaGACCAAGGTACAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LAEKEITCAIVANLPQHLLGFLL*TKVQLD
Trigger: GTCCAGCTGTACCTTGGTCAACAGTAGAAAACCCAA...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATGGTTTCTTTGCTTCCTaGGATGTAGTCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYGFFAS*DVVWDS
Trigger: AGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACC...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACAGCATCAGGTCGGGATaGCTCTTTCCTCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHSIRSG*LFPPSR
Trigger: CCTGCTTGGAGGAAAGAGCAATCCCGACCTGATGCT...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CTCCAGGAGTTAGATGACAATAAAATGGGTGCACCACACACCAACAGAATGGCCGGACAAGGCTGCTTTTaGTGTTCAGGAACAATAGGT +
Preference number: 5 (lower is better)
Translates to: LQELDDNKMGAPHTNRMAGQGCF*CSGTIG
Trigger: ACCTATTGTTCCTGAACACAAAAAGCAGCCTTGTCC...GGCCATTCTGTTGGTGTGTGGTGCACCCATTTTATTGTCATCTAACTCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATCCAGATGGAAGGCCATaGCTTAAAGATGTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: LLAEKEITCAIVANLPQHPDGRP*LKDVVL
Trigger: AAGCACTACATCTTTAAGCAATGGCCTTCCATCTGG...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGGTGAGGGTGCATGTGTaGACACTTCAAATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LAEKEITCAIVANLPQHLVRVHV*TLQILL
Trigger: GAGGAGAATTTGAAGTGTCAACACATGCACCCTCAC...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACATACCTCGGGGGATCTaGCGGCATTCCACAGTATGG +
Preference number: 5 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHIPRGI*RHSTVW
Trigger: CCATACTGTGGAATGCCGCAAGATCCCCCGAGGTAT...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCTTTTCTCGGTTGTCTaGATACCTCGGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQLFSVV*IPRGIL
Trigger: CAAGATCCCCCGAGGTATCAAGACAACCGAGAAAAG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCCAGTATTTGGCCAATaGGGTACTATTCCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: LAEKEITCAIVANLPQHLPVFGQ*GTIPSG
Trigger: TCCAGAGGGAATAGTACCCAATTGGCCAAATACTGG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGACTAAGGGCCAGTATTaGGCCAATTGGGTACTATTC +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQTKGQY*ANWVLF
Trigger: GAATAGTACCCAATTGGCCAAATACTGGCCCTTAGT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTTGGGTTTTCTACTGTaGACCAAGGTACAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDLGFLL*TKVQLD
Trigger: GTCCAGCTGTACCTTGGTCAACAGTAGAAAACCCAA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATAAACTCCAGTTTTGTTaGGTATTCTCGCACCACATC +
Preference number: 5 (lower is better)
Translates to: LLAEKEITCAIVANLPQHKLQFC*VFSHHI
Trigger: GATGTGGTGCGAGAATACCAAACAAAACTGGAGTTT...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATCAGGAAAATACTTCTTaGTTTCCATGGCTCATTGCC +
Preference number: 5 (lower is better)
Translates to: LLAEKEITCAIVANLPQHQENTS*FPWLIA
Trigger: GGCAATGAGCCATGGAAACAAAGAAGTATTTTCCTG...ATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCTTTGGAGCACCTCGTTaGACATCAGAAGTGCTATCA +
Preference number: 5 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSAFGAPR*TSEVLS
Trigger: TGATAGCACTTCTGATGTCAAACGAGGTGCTCCAAA...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTCTTGTGTCCTTATGCTaGGATCTGATTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIILVSLC*DLIASL
Trigger: CAAAGAGGCAATCAGATCCAAGCATAAGGACACAAG...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGCTTGTGTCCTTATGCTaGGATCTGATTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LAEKEITCAIVANLPQHLLVSLC*DLIASL
Trigger: CAAAGAGGCAATCAGATCCAAGCATAAGGACACAAG...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGGACCTGGTTTCCAATTaGTTTTTGGTGGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQDLVSN*FLVGSF
Trigger: AAAGCTTCCCACCAAAAACAAATTGGAAACCAGGTC...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATGTGAGGGTGCATGTGTaGACACTTCAAATTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDVRVHV*TLQILL
Trigger: GAGGAGAATTTGAAGTGTCAACACATGCACCCTCAC...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGGCTTGTGATGGAACTTaGGTTCTTCGTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMACDGT*VLRDCN
Trigger: GTTACAGTCACGAAGAACCAAAGTTCCATCACAAGC...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGCATTTGACTAAGGGCCAGTATTaGGCCAATTGGGTACTATTC +
Preference number: 5 (lower is better)
Translates to: LAEKEITCAIVANLPQHLTKGQY*ANWVLF
Trigger: GAATAGTACCCAATTGGCCAAATACTGGCCCTTAGT...CAAATGCTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS GCA 90 bp CTCCAGTTTTGTTTGGTATTCTCGCACCACATCAGGTGGTTTCTTTaGTTCCTTGGATGTAGTCTGGGACTCTTCAGGTTTAAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: LQFCLVFSHHIRWFL*FLGCSLGLFRFKVL
Trigger: CAAGACTTTAAACCTGAAGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACCACCTGATGTGGTGCGAGAATACCAAACAAAACTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 90 bp AAGTGCAAACTCCAGTTTTGTTTGGTATTCTCGCACCACATCAGGTaGTTTCTTTGCTTCCTTGGATGTAGTCTGGGACTCTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: KCKLQFCLVFSHHIR*FLCFLGCSLGLFRF
Trigger: AAACCTGAAGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACCACCTGATGTGGTGCGAGAATACCAAACAAAACTGGAGTTTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 90 bp GGCTTCGTGGGCCTGAGAGACTCAGATTTGAGTATGCATTCAACATaGAATAATATCCGATGTCGACAGGTGAGTCACATTTTGGATACT +
Preference number: 5 (lower is better)
Translates to: GFVGLRDSDLSMHST*NNIRCRQVSHILDT
Trigger: AGTATCCAAAATGTGACTCACCTGTCGACATCGGATATTATTCCATGTTGAATGCATACTCAAATCTGAGTCTCTCAGGCCCACGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACATTCAAGCCCATGAAGTaGTTACGTGTACTTGACTCC +
Preference number: 5 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTFKPMK*LRVLDS
Trigger: GGAGTCAAGTACACGTAACAACTTCATGGGCTTGAA...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTGTGCAAACTCCAGTTTaGTTTGGTATTCTCGCACCA +
Preference number: 5 (lower is better)
Translates to: YNLLAEKEITCAIVANLPVQTPV*FGILAP
Trigger: TGGTGCGAGAATACCAAACAAAACTGGAGTTTGCAC...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTGCAAACTCCAGTTTaGTTTGGTATTCTCGCACCA +
Preference number: 5 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTVQTPV*FGILAP
Trigger: TGGTGCGAGAATACCAAACAAAACTGGAGTTTGCAC...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGGACAGACAAAGCAGAGGGACAAGGCTGCTTTTaGTGTTCAGGAACAATAGGT +
Preference number: 5 (lower is better)
Translates to: RTVPRHLKILKIWTDKAEGQGCF*CSGTIG
Trigger: ACCTATTGTTCCTGAACACAAAAAGCAGCCTTGTCC...CTCTGCTTTGTCTGTCCAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AAGCAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATTTTGGAGCACCTCGTTaGACATCAGAAGTGCTATCA +
Preference number: 5 (lower is better)
Translates to: KQSRDTSTMWGYTYRFHDFGAPR*TSEVLS
Trigger: TGATAGCACTTCTGATGTCAAACGAGGTGCTCCAAA...ATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTGACCTGGTTTCCAATTaGTTTTTGGTGGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIDLVSN*FLVGSF
Trigger: AAAGCTTCCCACCAAAAACAAATTGGAAACCAGGTC...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGCCAGATGGAAGGCCATaGCTTAAAGATGTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQPDGRP*LKDVVL
Trigger: AAGCACTACATCTTTAAGCAATGGCCTTCCATCTGG...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCTTGTCCCTGTGGTCTTaGATCCTGAGGTGGGAAATG +
Preference number: 5 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFLSLWS*ILRWEM
Trigger: CATTTCCCACCTCAGGATCAAAGACCACAGGGACAA...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTTGGTTGCCATCATCATaGAAGGATATTGTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: YNLLAEKEITCAIVANLPWLPSS*KDIVPV
Trigger: CACAGGGACAATATCCTTCAATGATGATGGCAACCA...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTCTGCAGGAACGGTaGAGGATTAAGGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SHKWILYNLLAEKEITCAILQER*RIKAAV
Trigger: CACAGCCGCCTTAATCCTCAACCGTTCCTGCAGAAT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACCTTTTCTCGGTTGTCTaGATACCTCGGGGGATCTTG +
Preference number: 5 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHLFSVV*IPRGIL
Trigger: CAAGATCCCCCGAGGTATCAAGACAACCGAGAAAAG...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGAGTGCCCTAAAACTACACTATTaGTGGCAAGAGTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SEWVVWPHPYYFWIQMSALKLHY*WQESGL
Trigger: AAGGCCAGACTCTTGCCACAAATAGTGTAGTTTTAG...GGCACTCATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGCTAAAACTACACTATTaGTGGCAAGAGTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMLKLHY*WQESGL
Trigger: AAGGCCAGACTCTTGCCACAAATAGTGTAGTTTTAG...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACCACTCAGAATGGGTaGTGTGGCCTCACCCATATT +
Preference number: 5 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFTTQNG*CGLTHI
Trigger: AATATGGGTGAGGCCACACAACCCATTCTGAGTGGT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCCCAGCCAGAATCTGTTaGATTTCAGGTCACGTGGGA +
Preference number: 5 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFPARIC*ISGHVG
Trigger: TCCCACGTGACCTGAAATCAAACAGATTCTGGCTGG...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS TCA 90 bp TTCATAAGGCATTGGCGTTCCATGATTTTTGGTTGCCATCATCATTaGAGGATATTGTCCCTGTGGTCTTTGATCCTGAGGTGGGAAATG +
Preference number: 5 (lower is better)
Translates to: FIRHWRSMIFGCHHH*RILSLWSLILRWEM
Trigger: CATTTCCCACCTCAGGATCAAAGACCACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGCCTTATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACGGTTTCTTTGCTTCCTaGGATGTAGTCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHGFFAS*DVVWDS
Trigger: AGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACC...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGAAACTCCAGTTTTGTTaGGTATTCTCGCACCACATC +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQKLQFC*VFSHHI
Trigger: GATGTGGTGCGAGAATACCAAACAAAACTGGAGTTT...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCATGTTTCCATGGCTCATaGCCACATTGCTGCCATCAA +
Preference number: 5 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSCFHGS*PHCCHQ
Trigger: TTGATGGCAGCAATGTGGCAATGAGCCATGGAAACA...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGGAAAATACTTCTTaGTTTCCATGGCTCATTGCC +
Preference number: 5 (lower is better)
Translates to: YNLLAEKEITCAIVANLPQENTS*FPWLIA
Trigger: GGCAATGAGCCATGGAAACAAAGAAGTATTTTCCTG...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACACAGGAAAATACTTCTTaGTTTCCATGGCTCATTGCC +
Preference number: 5 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTQENTS*FPWLIA
Trigger: GGCAATGAGCCATGGAAACAAAGAAGTATTTTCCTG...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTCAGGGGGCATGAACTaGTCATTGACAAATGAATAC +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQSGGMN*SLTNEY
Trigger: GTATTCATTTGTCAATGACAAGTTCATGCCCCCTGA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTTCAGGGGGCATGAACTaGTCATTGACAAATGAATAC +
Preference number: 5 (lower is better)
Translates to: YNLLAEKEITCAIVANLPSGGMN*SLTNEY
Trigger: GTATTCATTTGTCAATGACAAGTTCATGCCCCCTGA...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGTTCCATGATTTTTGGTaGCCATCATCATTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQFHDFW*PSSLKD
Trigger: ATCCTTCAATGATGATGGCAACCAAAAATCATGGAA...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CAATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAACTGTTCATAAGGCATaGGCGTTCCATGATTTTTGG +
Preference number: 5 (lower is better)
Translates to: QSRDTSTMWGYTYRFHDTTVHKA*AFHDFW
Trigger: CCAAAAATCATGGAACGCCAATGCCTTATGAACAGT...TGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp CACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTCTGGATACAGATGTACTATATAACCTCCTaGCTGAGAAGGAGATCACAT +
Preference number: 5 (lower is better)
Translates to: HHSEWVVWPHPYYFWIQMYYITS*LRRRSH
Trigger: ATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTA...CATCTGTATCCAGAAATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCACCTCAGGCCAGCCTaGATAAATAGCAGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SHKWILYNLLAEKEITCAHLRPA*INSRKA
Trigger: AGCTTTCCTGCTATTTATCAAGGCTGGCCTGAGGTG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCCAGCCAGAATCTGTTaGATTTCAGGTCACGTGGGA +
Preference number: 5 (lower is better)
Translates to: SHKWILYNLLAEKEITCAPARIC*ISGHVG
Trigger: TCCCACGTGACCTGAAATCAAACAGATTCTGGCTGG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCGCATATGACTCTGGTTaGGGAGGACAAAACCCTGAA +
Preference number: 5 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFAYDSG*GGQNPE
Trigger: TTCAGGGTTTTGTCCTCCCAAACCAGAGTCATATGC...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTCAGAAAATACTTTGTATTTaGTCTACATCCTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: NLLAEKEITCAIVANLPQKILCI*STSSPP
Trigger: GGGAGGAGAGGATGTAGACAAAATACAAAGTATTTT...CTGAGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453089.2
CDS-3UTR CAA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCCAGAGTCACCAGAGCTaGCATTCTCTTCAGACGCCT +
Preference number: 5 (lower is better)
Translates to: YSISHKWILYNLLAEKEIQSHQS*HSLQTP
Trigger: AGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCTG...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTATCTGTTACAATCTCTaGCATTGGAGATTCAGACCT +
Preference number: 5 (lower is better)
Translates to: YNLLAEKEITCAIVANLPICYNL*HWRFRP
Trigger: AGGTCTGAATCTCCAATGCAAGAGATTGTAACAGAT...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACTGTTTCCATGGCTCATaGCCACATTGCTGCCATCAA +
Preference number: 5 (lower is better)
Translates to: ILYNLLAEKEITCAIVANCFHGS*PHCCHQ
Trigger: TTGATGGCAGCAATGTGGCAATGAGCCATGGAAACA...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCGGACAAGGCTGCTTTTaGTGTTCAGGAACAATAGGT +
Preference number: 5 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFGQGCF*CSGTIG
Trigger: ACCTATTGTTCCTGAACACAAAAAGCAGCCTTGTCC...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTCCTTCGTTTGCAGTTTaGGCTGCCGTATTTCTAGAC +
Preference number: 5 (lower is better)
Translates to: SHKWILYNLLAEKEITCAPSFAV*AAVFLD
Trigger: GTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGG...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACCTTGTGTCCTTATGCTaGGATCTGATTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHLVSLC*DLIASL
Trigger: CAAAGAGGCAATCAGATCCAAGCATAAGGACACAAG...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATGTTTCCAATTTGTTTTaGGTGGGAAGCTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYVSNLF*VGSFSS
Trigger: AGAAGAAAAGCTTCCCACCAAAAACAAATTGGAAAC...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp CTGAAACACTTGGACAGAAAATTGGCAAATTTGGTACATGGTTCAAGAAGTGAACACCTCAGGCCAGCCTaGATAAATAGCAGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LKHLDRKLANLVHGSRSEHLRPA*INSRKA
Trigger: AGCTTTCCTGCTATTTATCAAGGCTGGCCTGAGGTG...TTCACTTCTTGAACCATGTACCAAATTTGCCAATTTTCTGTCCAAGTGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TTGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTTCCTGAATTAAGTTaGCTGAACACGGTTCAGATT +
Preference number: 5 (lower is better)
Translates to: LLSDRHHSEWVVWPHPYYFPELS*LNTVQI
Trigger: AATCTGAACCGTGTTCAGCAAACTTAATTCAGGAAA...ATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TGCTTTCAGACAGACACCACTCAGAATGGGTTGTGTGGCCTCACCCATATTATTTTTCCTGAATTAAGTTaGCTGAACACGGTTCAGATT +
Preference number: 5 (lower is better)
Translates to: CFQTDTTQNGLCGLTHIIFPELS*LNTVQI
Trigger: AATCTGAACCGTGTTCAGCAAACTTAATTCAGGAAA...AATAATATGGGTGAGGCCACACAACCCATTCTGAGTGGTGTCTGTCTGAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTGCACTACACATCCTTaGCCTTACTTTTCCTATAAG +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQCTTHP*PYFSYK
Trigger: CTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGAAGTGCTATCAGCCTaGGTGCTACAAGGAACACTG +
Preference number: 5 (lower is better)
Translates to: ISHKWILYNLLAEKEITCEVLSA*VLQGTL
Trigger: CAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTTC...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGAAGTGCTATCAGCCTaGGTGCTACAAGGAACACTG +
Preference number: 5 (lower is better)
Translates to: YSISHKWILYNLLAEKEIEVLSA*VLQGTL
Trigger: CAGTGTTCCTTGTAGCACCAAGGCTGATAGCACTTC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGGTTTCCAATTTGTTTTaGGTGGGAAGCTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQVSNLF*VGSFSS
Trigger: AGAAGAAAAGCTTCCCACCAAAAACAAATTGGAAAC...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACCTCCCTGTTTCCAATTTGTTTTaGGTGGGAAGCTTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: YNLLAEKEITCAIVANLPVSNLF*VGSFSS
Trigger: AGAAGAAAAGCTTCCCACCAAAAACAAATTGGAAAC...AGGGAGGTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTTTGTCCCTGTGGTCTTaGATCCTGAGGTGGGAAATG +
Preference number: 5 (lower is better)
Translates to: YQMVALHILCLTFPIRKVLSLWS*ILRWEM
Trigger: CATTTCCCACCTCAGGATCAAAGACCACAGGGACAA...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACTGGTTGCCATCATCATaGAAGGATATTGTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: ILYNLLAEKEITCAIVANWLPSS*KDIVPV
Trigger: CACAGGGACAATATCCTTCAATGATGATGGCAACCA...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATCCCGTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTTCCATGATTTTTGGTaGCCATCATCATTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: NPVILPPCGAIHTDSMIQFHDFW*PSSLKD
Trigger: ATCCTTCAATGATGATGGCAACCAAAAATCATGGAA...CTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCACGGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACACTGTTCATAAGGCATaGGCGTTCCATGATTTTTGG +
Preference number: 5 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHTVHKA*AFHDFW
Trigger: CCAAAAATCATGGAACGCCAATGCCTTATGAACAGT...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACGCTTGTGATGGAACTTaGGTTCTTCGTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: ILYNLLAEKEITCAIVANACDGT*VLRDCN
Trigger: GTTACAGTCACGAAGAACCAAAGTTCCATCACAAGC...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 90 bp CACATTTTGGATACTGTTCATAAGGCATTGGCGTTCCATGATTTTTaGTTGCCATCATCATTGAAGGATATTGTCCCTGTGGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: HILDTVHKALAFHDF*LPSSLKDIVPVVFD
Trigger: ATCAAAGACCACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGCCTTATGAACAGTATCCAAAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACATCTGTTACAATCTCTaGCATTGGAGATTCAGACCT +
Preference number: 5 (lower is better)
Translates to: DTSTMWGYTYRFHDTVFHICYNL*HWRFRP
Trigger: AGGTCTGAATCTCCAATGCAAGAGATTGTAACAGAT...GTGAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTTGTTTCCATGGCTCATaGCCACATTGCTGCCATCAA +
Preference number: 5 (lower is better)
Translates to: ISHKWILYNLLAEKEITCCFHGS*PHCCHQ
Trigger: TTGATGGCAGCAATGTGGCAATGAGCCATGGAAACA...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCCTTCGTTTGCAGTTTaGGCTGCCGTATTTCTAGAC +
Preference number: 5 (lower is better)
Translates to: ISHKWILYNLLAEKEITCPSFAV*AAVFLD
Trigger: GTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCGCAAAACCCATGACTTaGAAACCAGAAATATCCCTT +
Preference number: 5 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFAKPMT*KPEISL
Trigger: AAGGGATATTTCTGGTTTCAAAGTCATGGGTTTTGC...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTCCAGTATTTGGCCAATaGGGTACTATTCCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: ISHKWILYNLLAEKEITCPVFGQ*GTIPSG
Trigger: TCCAGAGGGAATAGTACCCAATTGGCCAAATACTGG...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AGAATATCATTCACCAAGGACAGTCCCAAGGCATCTAAAAATCCTAAAGATCTGAGTTGTTACGTGTACTaGACTCCACTTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RISFTKDSPKASKNPKDLSCYVY*TPLCCF
Trigger: AAAACAGCAAAGTGGAGTCAAGTACACGTAACAACT...CAGATCTTTAGGATTTTTAGATGCCTTGGGACTGTCCTTGGTGAATGATATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTAGTTGTTACGTGTACTaGACTCCACTTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SHKWILYNLLAEKEITCASCYVY*TPLCCF
Trigger: AAAACAGCAAAGTGGAGTCAAGTACACGTAACAACT...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATTTCAAGCCCATGAAGTaGTTACGTGTACTTGACTCC +
Preference number: 5 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNFKPMK*LRVLDS
Trigger: GGAGTCAAGTACACGTAACAACTTCATGGGCTTGAA...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATGTGCAAACTCCAGTTTaGTTTGGTATTCTCGCACCA +
Preference number: 5 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNVQTPV*FGILAP
Trigger: TGGTGCGAGAATACCAAACAAAACTGGAGTTTGCAC...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACATCTGTTACAATCTCTaGCATTGGAGATTCAGACCT +
Preference number: 5 (lower is better)
Translates to: ILYNLLAEKEITCAIVANICYNL*HWRFRP
Trigger: AGGTCTGAATCTCCAATGCAAGAGATTGTAACAGAT...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTTTTGGAGCACCTCGTTaGACATCAGAAGTGCTATCA +
Preference number: 5 (lower is better)
Translates to: ISHKWILYNLLAEKEITCFGAPR*TSEVLS
Trigger: TGATAGCACTTCTGATGTCAAACGAGGTGCTCCAAA...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TGCTCAGCAGCGTGTACTTCCAACGAATTCAAAATTACATATGATCATATGAAGGACCTGGTTTCCAATTaGTTTTTGGTGGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: CSAACTSNEFKITYDHMKDLVSN*FLVGSF
Trigger: AAAGCTTCCCACCAAAAACAAATTGGAAACCAGGTC...CTTCATATGATCATATGTAATTTTGAATTCGTTGGAAGTACACGCTGCTGAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCCCAGATGGAAGGCCATaGCTTAAAGATGTAGTGCTT +
Preference number: 5 (lower is better)
Translates to: YSISHKWILYNLLAEKEIPDGRP*LKDVVL
Trigger: AAGCACTACATCTTTAAGCAATGGCCTTCCATCTGG...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTTGGTTGCCATCATCATaGAAGGATATTGTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: YQMVALHILCLTFPIRKVWLPSS*KDIVPV
Trigger: CACAGGGACAATATCCTTCAATGATGATGGCAACCA...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGCTTGTGATGGAACTTaGGTTCTTCGTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: YSISHKWILYNLLAEKEIACDGT*VLRDCN
Trigger: GTTACAGTCACGAAGAACCAAAGTTCCATCACAAGC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTTACTATATAACCTCCTaGCTGAGAAGGAGATCACAT +
Preference number: 5 (lower is better)
Translates to: SHKWILYNLLAEKEITCAYYITS*LRRRSH
Trigger: ATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTA...AGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp GTGATACTTCCACCATGTGGGGCTATACATACAGATTCCATGATACAGTATTTCACACGGTTCAGATTATaGGTTATGTCAATATGCACA +
Preference number: 5 (lower is better)
Translates to: VILPPCGAIHTDSMIQYFTRFRL*VMSICT
Trigger: TGTGCATATTGACATAACCAATAATCTGAACCGTGT...GAAATACTGTATCATGGAATCTGTATGTATAGCCCCACATGGTGGAAGTATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp ATCTGTTACGTGAAGTACAATTCAAAACCTGGACGCAACAGTCAAGTGATGTCAACACGGTTCAGATTATaGGTTATGTCAATATGCACA +
Preference number: 5 (lower is better)
Translates to: ICYVKYNSKPGRNSQVMSTRFRL*VMSICT
Trigger: TGTGCATATTGACATAACCAATAATCTGAACCGTGT...TGACATCACTTGACTGTTGCGTCCAGGTTTTGAATTGTACTTCACGTAACAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp ATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTGCTATTGTAGCAAACTGCACTACACATCCTTaGCCTTACTTTTCCTATAAG +
Preference number: 5 (lower is better)
Translates to: ILYNLLAEKEITCAIVANCTTHP*PYFSYK
Trigger: CTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCA...GTTTGCTACAATAGCACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS TCA 90 bp AGGGAAGAAGTTTCCCGTGTTATAGTGTTAATTGTACTAACCGTTTaGTCAGCCTCACTTTTATTTCCAAGTTTGACAAGTTCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: REEVSRVIVLIVLTV*SASLLFPSLTSSPK
Trigger: TTTGGGAGAACTTGTCAAACTTGGAAATAAAAGTGAGGCTGATCAAACGGTTAGTACAATTAACACTATAACACGGGAAACTTCTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATAAACTCCAGTTTTGTTaGGTATTCTCGCACCACATC +
Preference number: 5 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNKLQFC*VFSHHI
Trigger: GATGTGGTGCGAGAATACCAAACAAAACTGGAGTTT...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCTCAGGGGGCATGAACTaGTCATTGACAAATGAATAC +
Preference number: 5 (lower is better)
Translates to: YSISHKWILYNLLAEKEISGGMN*SLTNEY
Trigger: GTATTCATTTGTCAATGACAAGTTCATGCCCCCTGA...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp AATACCAAGAATAAAACCAGTGAAGAACTGCTTTCCATCCAAGTGGTTCTAAATACTGTTCATAAGGCATaGGCGTTCCATGATTTTTGG +
Preference number: 5 (lower is better)
Translates to: NTKNKTSEELLSIQVVLNTVHKA*AFHDFW
Trigger: CCAAAAATCATGGAACGCCAATGCCTTATGAACAGT...ATTTAGAACCACTTGGATGGAAAGCAGTTCTTCACTGGTTTTATTCTTGGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTAGTTGTTACGTGTACTaGACTCCACTTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: YQMVALHILCLTFPIRKVSCYVY*TPLCCF
Trigger: AAAACAGCAAAGTGGAGTCAAGTACACGTAACAACT...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp ATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCACATGTTACTATATAACCTCCTaGCTGAGAAGGAGATCACAT +
Preference number: 5 (lower is better)
Translates to: ISHKWILYNLLAEKEITCYYITS*LRRRSH
Trigger: ATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTA...ACATGTGATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS-3UTR CAA 90 bp TACAGTATTTCACATAAATGGATACTATATAACCTCCTTGCTGAGAAGGAGATCGCAAAACCCATGACTTaGAAACCAGAAATATCCCTT +
Preference number: 5 (lower is better)
Translates to: YSISHKWILYNLLAEKEIAKPMT*KPEISL
Trigger: AAGGGATATTTCTGGTTTCAAAGTCATGGGTTTTGC...GATCTCCTTCTCAGCAAGGAGGTTATATAGTATCCATTTATGTGAAATACTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS-3UTR CAA 90 bp TATCAGATGGTTGCACTACACATCCTTTGCCTTACTTTTCCTATAAGAAAAGTTTTCCATGATTTTTGGTaGCCATCATCATTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: YQMVALHILCLTFPIRKVFHDFW*PSSLKD
Trigger: ATCCTTCAATGATGATGGCAACCAAAAATCATGGAA...AACTTTTCTTATAGGAAAAGTAAGGCAAAGGATGTGTAGTGCAACCATCTGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000278590.8
ENST00000453089.2
CDS CCA 72 bp CTGAACTTGGAGGAGAGGGGTAGTCGCCAGGACAGCTaGACCGGGCGCCCACAGCGGAGTGCGGCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: LNLEERGSRQDS*TGRPQRSAAGA
Trigger: TGCACCTGCCGCACTCCGCTGTGGGCGCCCGGTCCAGCTGTCCTGGCGACTACCCCTCTCCTCCAAGTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 72 bp ATCTTGCGGCATTCCACAGTATGGGATCCGCCAGGCTaGCTCCTGTTGCTCAGGGAGGCTCTGGAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: ILRHSTVWDPPG*LLLLREALEGE
Trigger: TTCACCTTCCAGAGCCTCCCTGAGCAACAGGAGCCAGCCTGGCGGATCCCATACTGTGGAATGCCGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp AGGCTGGCTCCTGTTGCTCAGGGAGGCTCTGGAAGGTaGACTGCTCATAACACGGCTGTGTGGAGTTATCGG +
Preference number: 6 (lower is better)
Translates to: RLAPVAQGGSGR*TAHNTAVWSYR
Trigger: CCGATAACTCCACACAGCCGTGTTATGAGCAGTTCACCTTCCAGAGCCTCCCTGAGCAACAGGAGCCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp CATAGGACCGGTCATTGTAACCCACGTAGGAGTCACTaGTCCCACAGCTCATGCTCCCTTCACTGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: HRTGHCNPRRSH*SHSSCSLHCCS
Trigger: ACTGCAGCAGTGAAGGGAGCATGAGCTGTGGGAGCAGTGACTCCTACGTGGGTTACAATGACCGGTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp GCAGGTGCAGAGCCAGGTGCGGAAGAGGAGGCTTGTGATGGAACTTaGGTTCTTCGTGACTGTAACTTTGCCCTCTGGTTAAGGGGTCGT +
Preference number: 6 (lower is better)
Translates to: AGAEPGAEEEACDGT*VLRDCNFALWLRGR
Trigger: ACGACCCCTTAACCAGAGGGCAAAGTTACAGTCACGAAGAACCAAAGTTCCATCACAAGCCTCCTCTTCCGCACCTGGCTCTGCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp AATCTTTTCTCGGTTGTCTTGATACCTCGGGGGATCTaGCGGCATTCCACAGTATGGGATCCGCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: NLFSVVLIPRGI*RHSTVWDPPGW
Trigger: CCAGCCTGGCGGATCCCATACTGTGGAATGCCGCAAGATCCCCCGAGGTATCAAGACAACCGAGAAAAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp ACACCACTCTCCTCCCCTGGACTCGCCGGGATGGCGTaGACACCAGGATTTTCTCCTTCTCTAATTTACGTA +
Preference number: 6 (lower is better)
Translates to: TPLSSPGLAGMA*TPGFSPSLIYV
Trigger: TACGTAAATTAGAGAAGGAGAAAATCCTGGTGTTCACGCCATCCCGGCGAGTCCAGGGGAGGAGAGTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp ACTTCAAATTCTCCTCTAGCTGTGGGTCGGGGGAGCTaGCATAGGACCGGTCATTGTAACCCACGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: TSNSPLAVGRGS*HRTGHCNPRRS
Trigger: ACTCCTACGTGGGTTACAATGACCGGTCCTATGTCAGCTCCCCCGACCCACAGCTAGAGGAGAATTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp TTGACCAAGGTACAGCTGGACTTAACTGTGGGTCAGTaGTCTCCACATAAAGGTGGCCGAGGTCATGCCCTA +
Preference number: 6 (lower is better)
Translates to: LTKVQLDLTVGQ*SPHKGGRGHAL
Trigger: TAGGGCATGACCTCGGCCACCTTTATGTGGAGAGCACTGACCCACAGTTAAGTCCAGCTGTACCTTGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 72 bp TCTTTCAATAACCCAGCTGGGATTTCTCCACTAAAATaGCTGCGGCGAGCTGCTGGGCGTCTGTCATGTGAG +
Preference number: 6 (lower is better)
Translates to: SFNNPAGISPLK*LRRAAGRLSCE
Trigger: CTCACATGACAGACGCCCAGCAGCTCGCCGCAGCCATTTTAGTGGAGAAATCCCAGCTGGGTTATTGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp GAGCCAGGTGCGGAAGAGGAGGCTTGTGATGGAACTTaGGTTCTTCGTGACTGTAACTTTGCCCTCTGGTTA +
Preference number: 6 (lower is better)
Translates to: EPGAEEEACDGT*VLRDCNFALWL
Trigger: TAACCAGAGGGCAAAGTTACAGTCACGAAGAACCAAAGTTCCATCACAAGCCTCCTCTTCCGCACCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp ATTGATATAAATCTTTTCTCGGTTGTCTTGATACCTCGGGGGATCTaGCGGCATTCCACAGTATGGGATCCGCCAGGCTGGCTCCTGTTG +
Preference number: 6 (lower is better)
Translates to: IDINLFSVVLIPRGI*RHSTVWDPPGWLLL
Trigger: CAACAGGAGCCAGCCTGGCGGATCCCATACTGTGGAATGCCGCAAGATCCCCCGAGGTATCAAGACAACCGAGAAAAGATTTATATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp GCTTTTCACCAGTCCTCCTTCGTTTGCAGTTTTGGCTaGCGTATTTCTAGACATGGCACGGAGTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: AFHQSSFVCSFG*RISRHGTEFIS
Trigger: GCTGATGAACTCCGTGCCATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGGTGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp GTGAAGGAGAACTGTCATAAAGTCGAGAGTCAGAGATaGTGTCTATTCTCGTGGCCACCAAGGACCTCCCTA +
Preference number: 6 (lower is better)
Translates to: VKENCHKVESQR*CLFSWPPRTSL
Trigger: TAGGGAGGTCCTTGGTGGCCACGAGAATAGACAGCATCTCTGACTCTCGACTTTATGACAGTTCTCCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp CAAGGAACACTGTTGCTTTTCACCAGTCCTCCTTCGTTTGCAGTTTaGGCTGCCGTATTTCTAGACATGGCACGGAGTTCATCAGCCACT +
Preference number: 6 (lower is better)
Translates to: QGTLLLFTSPPSFAV*AAVFLDMARSSSAT
Trigger: AGTGGCTGATGAACTCCGTGCCATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGGTGAAAAGCAACAGTGTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp TGCTTGGATCTGATTGCCTCTTTGGAGCACCTCGTTTaGCATCAGAAGTGCTATCAGCCTTGGTGCTACAAG +
Preference number: 6 (lower is better)
Translates to: CLDLIASLEHLV*HQKCYQPWCYK
Trigger: CTTGTAGCACCAAGGCTGATAGCACTTCTGATGTCAAACGAGGTGCTCCAAAGAGGCAATCAGATCCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp CAGGCCTTCCTGGCGGGAATAAGGCTTTCTTTGTCGTaGAGGAGAACTGTCATAAAGTCGAGAGTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: QAFLAGIRLSLS*RRTVIKSRVRD
Trigger: ATCTCTGACTCTCGACTTTATGACAGTTCTCCTTCACGACAAAGAAAGCCTTATTCCCGCCAGGAAGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp AGGAACACTGTTGCTTTTCACCAGTCCTCCTTCGTTTaGAGTTTTGGCTGCCGTATTTCTAGACATGGCACG +
Preference number: 6 (lower is better)
Translates to: RNTVAFHQSSFV*SFGCRISRHGT
Trigger: CGTGCCATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGGTGAAAAGCAACAGTGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 72 bp GGAACTTTGGTTCTTCGTGACTGTAACTTTGCCCTCTaGTTAAGGGGTCGTGGAAATTCTGCAGGAACGGTT +
Preference number: 6 (lower is better)
Translates to: GTLVLRDCNFAL*LRGRGNSAGTV
Trigger: AACCGTTCCTGCAGAATTTCCACGACCCCTTAACCAGAGGGCAAAGTTACAGTCACGAAGAACCAAAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp CTGTTGCTTTTCACCAGTCCTCCTTCGTTTGCAGTTTaGGCTGCCGTATTTCTAGACATGGCACGGAGTTCA +
Preference number: 6 (lower is better)
Translates to: LLLFTSPPSFAV*AAVFLDMARSS
Trigger: TGAACTCCGTGCCATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAGGACTGGTGAAAAGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp GCTGTGGCTGACTGCCCCTTTCGGGATGGTAATATTTaGACTTGTGTCCATAGGTACACTTCTTTCCATATG +
Preference number: 6 (lower is better)
Translates to: AVADCPFRDGNI*TCVHRYTSFHM
Trigger: CATATGGAAAGAAGTGTACCTATGGACACAAGTGCAAATATTACCATCCCGAAAGGGGCAGTCAGCCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp TGTTTGGTATTCTCGCACCACATCAGGTGGTTTCTTTaGTTCCTTGGATGTAGTCTGGGACTCTTCAGGTTT +
Preference number: 6 (lower is better)
Translates to: CLVFSHHIRWFL*FLGCSLGLFRF
Trigger: AAACCTGAAGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACCACCTGATGTGGTGCGAGAATACCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp GCTTTTCTTCTAGGTCTTGGTAGACTTGTGTCCTTATaGTTGGATCTGATTGCCTCTTTGGAGCACCTCGTT +
Preference number: 6 (lower is better)
Translates to: AFLLGLGRLVSL*LDLIASLEHLV
Trigger: AACGAGGTGCTCCAAAGAGGCAATCAGATCCAAGCATAAGGACACAAGTCTACCAAGACCTAGAAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 72 bp CCAGATGGAAGGCCATTGCTTAAAGATGTAGTGCTTTaGGGTTTTGCAGTAGAAGTAGCTGGGATGCTAACT +
Preference number: 6 (lower is better)
Translates to: PDGRPLLKDVVL*GFAVEVAGMLT
Trigger: AGTTAGCATCCCAGCTACTTCTACTGCAAAACCCCAAAGCACTACATCTTTAAGCAATGGCCTTCCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp TTAAAGTCTTGCAAAATTTCATTGCGCTTGAGTATGTaGGGCTCTAAACAGGGAGACCTGCAGAGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LKSCKISLRLSM*GSKQGDLQSCL
Trigger: CAGACAGCTCTGCAGGTCTCCCTGTTTAGAGCCTCACATACTCAAGCGCAATGAAATTTTGCAAGACTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp CATTGGCGTTCCATGATTTTTGGTTGCCATCATCATTaGAGGATATTGTCCCTGTGGTCTTTGATCCTGAGG +
Preference number: 6 (lower is better)
Translates to: HWRSMIFGCHHH*RILSLWSLILR
Trigger: CCTCAGGATCAAAGACCACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp TATTCTCGCACCACATCAGGTGGTTTCTTTGCTTCCTaGGATGTAGTCTGGGACTCTTCAGGTTTAAAGTCT +
Preference number: 6 (lower is better)
Translates to: YSRTTSGGFFAS*DVVWDSSGLKS
Trigger: AGACTTTAAACCTGAAGAGTCCCAGACTACATCCAAGGAAGCAAAGAAACCACCTGATGTGGTGCGAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp GCATTGGCGTTCCATGATTTTTGGTTGCCATCATCATaGAAGGATATTGTCCCTGTGGTCTTTGATCCTGAG +
Preference number: 6 (lower is better)
Translates to: ALAFHDFWLPSS*KDIVPVVFDPE
Trigger: CTCAGGATCAAAGACCACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp GTTCATAAGGCATTGGCGTTCCATGATTTTTGGTTGCCATCATCATaGAAGGATATTGTCCCTGTGGTCTTTGATCCTGAGGTGGGAAAT +
Preference number: 6 (lower is better)
Translates to: VHKALAFHDFWLPSS*KDIVPVVFDPEVGN
Trigger: ATTTCCCACCTCAGGATCAAAGACCACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGCCTTATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp TCTGTTACAATCTCTTGCATTGGAGATTCAGACCTCTaGGATTCCAGGGAAGAAGTTTCCCGTGTTATAGTG +
Preference number: 6 (lower is better)
Translates to: SVTISCIGDSDL*DSREEVSRVIV
Trigger: CACTATAACACGGGAAACTTCTTCCCTGGAATCTCAGAGGTCTGAATCTCCAATGCAAGAGATTGTAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS GCA 72 bp ATCAGAATTTGTGTTTTCTTCAGAGTCACCAGAGCTTaGATTCTCTTCAGACGCCTCTTTTTCATCCTTCCC +
Preference number: 6 (lower is better)
Translates to: IRICVFFRVTRA*ILFRRLFFILP
Trigger: GGGAAGGATGAAAAAGAGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCTGAAGAAAACACAAATTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 72 bp GGCCTGAGAGACTCAGATTTGAGTATGCATTCAACATaGAATAATATCCGATGTCGACAGGTGAGTCACATT +
Preference number: 6 (lower is better)
Translates to: GLRDSDLSMHST*NNIRCRQVSHI
Trigger: AATGTGACTCACCTGTCGACATCGGATATTATTCCATGTTGAATGCATACTCAAATCTGAGTCTCTCAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp GATCAGAATTTGTGTTTTCTTCAGAGTCACCAGAGCTaGCATTCTCTTCAGACGCCTCTTTTTCATCCTTCC +
Preference number: 6 (lower is better)
Translates to: DQNLCFLQSHQS*HSLQTPLFHPS
Trigger: GGAAGGATGAAAAAGAGGCGTCTGAAGAGAATGCAAGCTCTGGTGACTCTGAAGAAAACACAAATTCTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp TGGTCTCAGATTTTCACCATCATCTGTTACAATCTCTaGCATTGGAGATTCAGACCTCTGAGATTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: WSQIFTIICYNL*HWRFRPLRFQG
Trigger: TCCCTGGAATCTCAGAGGTCTGAATCTCCAATGCAAGAGATTGTAACAGATGATGGTGAAAATCTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp ACTGTTCATAAGGCATTGGCGTTCCATGATTTTTGGTaGCCATCATCATTGAAGGATATTGTCCCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: TVHKALAFHDFW*PSSLKDIVPVV
Trigger: GACCACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGCCTTATGAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp GCTCTACTGAAATGCTACCCAATTGTTCTGACTCATGATCAGAATTaGTGTTTTCTTCAGAGTCACCAGAGCTTGCATTCTCTTCAGACG +
Preference number: 6 (lower is better)
Translates to: ALLKCYPIVLTHDQN*CFLQSHQSLHSLQT
Trigger: CGTCTGAAGAGAATGCAAGCTCTGGTGACTCTGAAGAAAACACAAATTCTGATCATGAGTCAGAACAATTGGGTAGCATTTCAGTAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CCA 72 bp GATACTGTTCATAAGGCATTGGCGTTCCATGATTTTTaGTTGCCATCATCATTGAAGGATATTGTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: DTVHKALAFHDF*LPSSLKDIVPV
Trigger: CACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGCCTTATGAACAGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp AATTTCCTGATCTGTAATGAGAGCATCAGGTCGGGATaGCTCTTTCCTCCAAGCAGGAACAAAAACTGTAAT +
Preference number: 6 (lower is better)
Translates to: NFLICNESIRSG*LFPPSRNKNCN
Trigger: ATTACAGTTTTTGTTCCTGCTTGGAGGAAAGAGCAATCCCGACCTGATGCTCTCATTACAGATCAGGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp ATGCTAACTAAGGAAGGTACAGACCTGGTTTCCAATTaGTTTTTGGTGGGAAGCTTTTCTTCTAGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: MLTKEGTDLVSN*FLVGSFSSRSW
Trigger: CCAAGACCTAGAAGAAAAGCTTCCCACCAAAAACAAATTGGAAACCAGGTCTGTACCTTCCTTAGTTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp ATTTTGGATACTGTTCATAAGGCATTGGCGTTCCATGATTTTTGGTaGCCATCATCATTGAAGGATATTGTCCCTGTGGTCTTTGATCCT +
Preference number: 6 (lower is better)
Translates to: ILDTVHKALAFHDFW*PSSLKDIVPVVFDP
Trigger: AGGATCAAAGACCACAGGGACAATATCCTTCAATGATGATGGCAACCAAAAATCATGGAACGCCAATGCCTTATGAACAGTATCCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp CAGGGAAGAAGTTTCCCGTGTTATAGTGTTAATTGTACTAACCGTTaGATCAGCCTCACTTTTATTTCCAAGTTTGACAAGTTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: QGRSFPCYSVNCTNR*ISLTFISKFDKFSQ
Trigger: TTGGGAGAACTTGTCAAACTTGGAAATAAAAGTGAGGCTGATCAAACGGTTAGTACAATTAACACTATAACACGGGAAACTTCTTCCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 90 bp AATAACTATTGGTCTCAGATTTTCACCATCATCTGTTACAATCTCTaGCATTGGAGATTCAGACCTCTGAGATTCCAGGGAAGAAGTTTC +
Preference number: 6 (lower is better)
Translates to: NNYWSQIFTIICYNL*HWRFRPLRFQGRSF
Trigger: GAAACTTCTTCCCTGGAATCTCAGAGGTCTGAATCTCCAATGCAAGAGATTGTAACAGATGATGGTGAAAATCTGAGACCAATAGTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS TCA 72 bp GTTTCCCGTGTTATAGTGTTAATTGTACTAACCGTTTaGTCAGCCTCACTTTTATTTCCAAGTTTGACAAGT +
Preference number: 6 (lower is better)
Translates to: VSRVIVLIVLTV*SASLLFPSLTS
Trigger: ACTTGTCAAACTTGGAAATAAAAGTGAGGCTGATCAAACGGTTAGTACAATTAACACTATAACACGGGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5
CDS CAA 72 bp AGTTTCCCGTGTTATAGTGTTAATTGTACTAACCGTTaGATCAGCCTCACTTTTATTTCCAAGTTTGACAAG +
Preference number: 6 (lower is better)
Translates to: SFPCYSVNCTNR*ISLTFISKFDK
Trigger: CTTGTCAAACTTGGAAATAAAAGTGAGGCTGATCAAACGGTTAGTACAATTAACACTATAACACGGGAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000278590.8
ENST00000453089.2
ENST00000528673.5