Pregenerated sensors for ZC3H11A (Homo sapiens)
Ensembl gene IDs: ENSG00000058673Ensembl transcript IDs: ENST00000495527.5, ENST00000638800.1, ENST00000639812.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCTCTGTCTGGGGTCTCTaGTCAAGATGGATCCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LHERPIAFCLGSLVKMDPSVWGL*SRWIPG Trigger: GCCTGGGATCCATCTTGACAAGAGACCCCAGACAGA...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000638800.1 ENST00000639812.1 |
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| CDS-3UTR TCA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGATAACAAAGATCTGCTaGAAATTTTCGTTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQIITEIRALTRKANSILITKIC*KFSFPQ Trigger: CTGGGGAAACGAAAATTTTCAGCAGATCTTTGTTAT...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638800.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCTGGCCCTGGAAAGGCTaGCTTACGCAGCCTAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPWPWKG*LTQPRS Trigger: GGACCTAGGCTGCGTAAGCAAGCCTTTCCAGGGCCA...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000638800.1 ENST00000639812.1 |
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| CDS TCA 90 bp | TCACAGAGGTTACAAATGGCCCGCCAGGTGTACTGGGGGTCAACATaGAAGAAGTGCCACACAATGGAGGTCTTGGCTCTAGTACTAGGT | + |
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Preference number: 5 (lower is better) Translates to: SQRLQMARQVYWGST*KKCHTMEVLALVLG Trigger: ACCTAGTACTAGAGCCAAGACCTCCATTGTGTGGCACTTCTTTCATGTTGACCCCCAGTACACCTGGCGGGCCATTTGTAACCTCTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGACGCATCAGAGTGCCTaGCTCTGCAACGGGAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMTHQSA*LCNGNR Trigger: CCTATTCCCGTTGCAGAGCAAGGCACTCTGATGCGT...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGTCCTGCTCAGGGTCATaGGAAGCTAACAAAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMSCSGS*EANKAG Trigger: CCCTGCTTTGTTAGCTTCCAATGACCCTGAGCAGGA...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS TCA 90 bp | CTCTCCACTAGCAACTCCAAACTTGTTGGCCCTGGTCCAATGAGGTaGATGCCTTGCTTGCAGATGTCGTTGAAGAGTAGATGTACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSTSNSKLVGPGPMR*MPCLQMSLKSRCTK Trigger: CTTGGTACATCTACTCTTCAACGACATCTGCAAGCAAGGCATTCACCTCATTGGACCAGGGCCAACAAGTTTGGAGTTGCTAGTGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CCA 90 bp | TACATTCAGATTGCCAACTACACATGGGGCAACTTAGATACTGGATaGCAACCTGGGTCAAAGCCGGCCATATGCTTATCTTCCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YIQIANYTWGNLDTG*QPGSKPAICLSSSA Trigger: GGCAGAGGAAGATAAGCATATGGCCGGCTTTGACCCAGGTTGCCATCCAGTATCTAAGTTGCCCCATGTGTAGTTGGCAATCTGAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGTGGCCCTGGAAAGGCTaGCTTACGCAGCCTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILWPWKG*LTQPRS Trigger: GGACCTAGGCTGCGTAAGCAAGCCTTTCCAGGGCCA...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000638800.1 ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGGCACCACTGTCTTTGTaGGCAACAGCCCAATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMAPLSL*ATAQWI Trigger: TATCCATTGGGCTGTTGCCAACAAAGACAGTGGTGC...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CCA 90 bp | CTATATTGCTCTCAAAAAGACTTTCTTCATCCTGCTCAGGGTCATTaGAAGCTAACAAAGCAGGGGCATCTGCAACAGGCCTCCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LYCSQKDFLHPAQGH*KLTKQGHLQQASQI Trigger: GATCTGGGAGGCCTGTTGCAGATGCCCCTGCTTTGTTAGCTTCCAATGACCCTGAGCAGGATGAAGAAAGTCTTTTTGAGAGCAATATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGTGCAGGGTAGGTGTTTaGGTTTCATCACCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMCRVGV*VSSPSS Trigger: TGAGGAAGGTGATGAAACCAAAACACCTACCCTGCA...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000638800.1 ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGGGGATCCTGCCATTATaGAGAAAAGACGCAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMGILPL*RKDAVS Trigger: GGAAACTGCGTCTTTTCTCAATAATGGCAGGATCCC...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCGCCAAGATACAGGGCTaGGATTTAAGCATGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPAKIQG*DLSMAL Trigger: AAGTGCCATGCTTAAATCCAAGCCCTGTATCTTGGC...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCGGGAACATGAAGCTTTaGCTTCCAAGGGCAACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPGNMKL*LPRATL Trigger: CAATGTTGCCCTTGGAAGCAAAAGCTTCATGTTCCC...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCACCAGTATCACTGGTTaGCCATTAAATAGTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPTSITG*PLNSGP Trigger: AGGGCCACTATTTAATGGCAAACCAGTGATACTGGT...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000638800.1 ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCGAATCACTAAAAGTGTaGCATCTTCTGCCAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPESLKV*HLLPGE Trigger: CTCTCCTGGCAGAAGATGCAACACTTTTAGTGATTC...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCCCTGACTTATGTGACTaGAGACTGGATTTCCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPPDLCD*RLDFHN Trigger: GTTGTGGAAATCCAGTCTCAAGTCACATAAGTCAGG...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS TCA 90 bp | AGTAAGTCTCTGATGGCAACCTATAATCAGGGGCCACAATCTGCATaGACCTCTGAAAGGCTGGGGTTGAGAAATAGTTGTAAGGATGCA | + |
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Preference number: 5 (lower is better) Translates to: SKSLMATYNQGPQSA*TSERLGLRNSCKDA Trigger: TGCATCCTTACAACTATTTCTCAACCCCAGCCTTTCAGAGGTTCATGCAGATTGTGGCCCCTGATTATAGGTTGCCATCAGAGACTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGAAGAAGCTTCTGAAGTaGGAATTTGGCAGATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMKKLLK*EFGRSL Trigger: CAGAGATCTGCCAAATTCCAACTTCAGAAGCTTCTT...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGTATTCAAAGCTTCCATaGCTTCCAGAAGAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMYSKLP*LPEEGD Trigger: ATCTCCCTCTTCTGGAAGCAATGGAAGCTTTGAATA...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCTCTGAAAGGCTGGGGTaGAGAAATAGTTGTAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPSERLG*RNSCKD Trigger: ATCCTTACAACTATTTCTCAACCCCAGCCTTTCAGA...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGATATTCTCAATGCTTTaGTGCTCGCAGAAAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMIFSML*CSQKKS Trigger: GGACTTTTTCTGCGAGCACAAAAGCATTGAGAATAT...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGGATAGGATGTGTGGCTaGCAGGTGTCGTTGAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILDRMCG*QVSLKC Trigger: ACACTTCAACGACACCTGCAAGCCACACATCCTATC...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGTGCAGGGTAGGTGTTTaGGTTTCATCACCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILCRVGV*VSSPSS Trigger: TGAGGAAGGTGATGAAACCAAAACACCTACCCTGCA...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000638800.1 ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCAGGCTGATATGATGATGGTAAAACCACCATCTTaGATTGCATGTACCACATTA | + |
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Preference number: 5 (lower is better) Translates to: SILSGVSCQDGSQADMMMVKPPS*IACTTL Trigger: TAATGTGGTACATGCAATCAAAGATGGTGGTTTTAC...CATCATCATATCAGCCTGGGATCCATCTTGACAAGAGACCCCAGACAGAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | TTACACGAAAGGCCAATAGCATTCTGTCTGGGGTCTCTTGTCAAGATGGATCCCTCTGAATACTTCTCTTaGAAGTACTCATCCACAACT | + |
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Preference number: 5 (lower is better) Translates to: LHERPIAFCLGSLVKMDPSEYFS*KYSSTT Trigger: AGTTGTGGATGAGTACTTCAAAGAGAAGTATTCAGA...GGGATCCATCTTGACAAGAGACCCCAGACAGAATGCTATTGGCCTTTCGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGCACACAATGGAGGTCTaGGCTCTAGTACTAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILHTMEV*ALVLGR Trigger: TCTACCTAGTACTAGAGCCAAGACCTCCATTGTGTG...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CCA 90 bp | TTCCAAAGAAACCCAGTGTACAGTCACAATAAAATAGTCAGTGGATaGGTCATGGGTCCATATGTCAACAGTCAGGTGTATCTTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: FQRNPVYSHNKIVSG*VMGPYVNSQVYLLA Trigger: AGCCAAAAGATACACCTGACTGTTGACATATGGACCCATGACCCATCCACTGACTATTTTATTGTGACTGTACACTGGGTTTCTTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGAGGAATTTTCAGCCCTaGTGTGATTTCAGGTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILRNFQP*CDFRFP Trigger: GGGAAACCTGAAATCACACAAGGGCTGAAAATTCCT...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGTGCTTGCAGATGTCGTaGAAGAGTAGATGTACCAAG | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILCLQMS*KSRCTK Trigger: CTTGGTACATCTACTCTTCAACGACATCTGCAAGCA...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGTATTACACACAGCTCTaGAGATGTGCTGAGGATCAG | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILYYTQL*RCAEDQ Trigger: CTGATCCTCAGCACATCTCAAGAGCTGTGTGTAATA...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS TCA 90 bp | GCCACTAACATATTCTCAATGCTTTTGTGCTCGCAGAAAAAGTCCTaGATGACCATATTTAAACAATGCAGGAAGCATGGCACATGGGTA | + |
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Preference number: 5 (lower is better) Translates to: ATNIFSMLLCSQKKS*MTIFKQCRKHGTWV Trigger: TACCCATGTGCCATGCTTCCTGCATTGTTTAAATATGGTCATTCAGGACTTTTTCTGCGAGCACAAAAGCATTGAGAATATGTTAGTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGCTTCATCTAATCCATTaGCAACAGCACCACTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILLHLIH*QQHHCL Trigger: AAGACAGTGGTGCTGTTGCAAATGGATTAGATGAAG...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGACCACATTAGAGGAATaGTCAGAAACAATGAAGCTA | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILTTLEE*SETMKL Trigger: TAGCTTCATTGTTTCTGACAATTCCTCTAATGTGGT...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAATAATAACTGAAATTCGGGCACTTACACGAAAGGCCAATAGCATTCTGTTCTTTTTCACTGCTTaGAACAACTTCATTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SQIITEIRALTRKANSILFFFTA*NNFILL Trigger: GAGCAGAATGAAGTTGTTCAAAGCAGTGAAAAAGAA...CAGAATGCTATTGGCCTTTCGTGTAAGTGCCCGAATTTCAGTTATTATTTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS TCA 72 bp | TTACAAATGGCCCGCCAGGTGTACTGGGGGTCAACATaGAAGAAGTGCCACACAATGGAGGTCTTGGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: LQMARQVYWGST*KKCHTMEVLAL Trigger: TAGAGCCAAGACCTCCATTGTGTGGCACTTCTTTCATGTTGACCCCCAGTACACCTGGCGGGCCATTTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CAA 90 bp | GTCTCAGCTTCATCTAATCCATTTGCAACAGCACCACTGTCTTTGTaGGCAACAGCCCAATGGATAGGATGTGTGGCTTGCAGGTGTCGT | + |
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Preference number: 6 (lower is better) Translates to: VSASSNPFATAPLSL*ATAQWIGCVACRCR Trigger: ACGACACCTGCAAGCCACACATCCTATCCATTGGGCTGTTGCCAACAAAGACAGTGGTGCTGTTGCAAATGGATTAGATGAAGCTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CAA 90 bp | TCCACAACATGTTGTTTCTCTCTCCTGCGCACGCATCAGAGTGCCTaGCTCTGCAACGGGAATAGGACTTTCAGATCTGTTTTCAACCTC | + |
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Preference number: 6 (lower is better) Translates to: STTCCFSLLRTHQSA*LCNGNRTFRSVFNL Trigger: GAGGTTGAAAACAGATCTGAAAGTCCTATTCCCGTTGCAGAGCAAGGCACTCTGATGCGTGCGCAGGAGAGAGAAACAACATGTTGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CCA 72 bp | TCTCAAAAAGACTTTCTTCATCCTGCTCAGGGTCATTaGAAGCTAACAAAGCAGGGGCATCTGCAACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SQKDFLHPAQGH*KLTKQGHLQQA Trigger: GGCCTGTTGCAGATGCCCCTGCTTTGTTAGCTTCCAATGACCCTGAGCAGGATGAAGAAAGTCTTTTTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CAA 90 bp | TCAGTCTCAGCTTCATCTAATCCATTTGCAACAGCACCACTGTCTTaGTTGGCAACAGCCCAATGGATAGGATGTGTGGCTTGCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SVSASSNPFATAPLS*LATAQWIGCVACRC Trigger: ACACCTGCAAGCCACACATCCTATCCATTGGGCTGTTGCCAACAAAGACAGTGGTGCTGTTGCAAATGGATTAGATGAAGCTGAGACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CAA 90 bp | TCTATATTGCTCTCAAAAAGACTTTCTTCATCCTGCTCAGGGTCATaGGAAGCTAACAAAGCAGGGGCATCTGCAACAGGCCTCCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SILLSKRLSSSCSGS*EANKAGASATGLPD Trigger: ATCTGGGAGGCCTGTTGCAGATGCCCCTGCTTTGTTAGCTTCCAATGACCCTGAGCAGGATGAAGAAAGTCTTTTTGAGAGCAATATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS TCA 72 bp | CACAAACATAAGTCATTAGAGTCCACTGAAGGGAGGTaGGCACAACTCCACTGGCTCTACCAAGACTATGGT | + |
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Preference number: 6 (lower is better) Translates to: HKHKSLESTEGR*AQLHWLYQDYG Trigger: ACCATAGTCTTGGTAGAGCCAGTGGAGTTGTGCTCACCTCCCTTCAGTGGACTCTAATGACTTATGTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS CCA 72 bp | AGTCAATTCTGGAAAGCCAACACAGACTCCGCATACTaGTCACAGCAAATGCTAGTTGAGCCCTTTCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SQFWKANTDSAY*SQQMLVEPFQF Trigger: GAACTGAAAGGGCTCAACTAGCATTTGCTGTGACCAGTATGCGGAGTCTGTGTTGGCTTTCCAGAATTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS TCA 72 bp | GGTCATCACCTCCTGAGAACTCTGAATACTTCTCTTTaGAGTACTCATCCACAACTGCTACAGCAGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GHHLLRTLNTSL*STHPQLLQQKG Trigger: TCCCTTCTGCTGTAGCAGTTGTGGATGAGTACTTCAAAGAGAAGTATTCAGAGTTCTCAGGAGGTGATGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS CCA 72 bp | CCAATGGCCAGTTTCGTCCTGCTTCAAATTCTTCCATaGAAGTTGGTGATCATTTTGGAACTCTTGCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: PMASFVLLQILP*KLVIILELLQY Trigger: ATACTGCAAGAGTTCCAAAATGATCACCAACTTCCATGGAAGAATTTGAAGCAGGACGAAACTGGCCATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS CAA 90 bp | TTGGCTCTAGTTCCAGGAATTAAAGCATGCTTGACAATGTTACTTTaGATGAGAAATCTCCCTCTTTCTGCCCTTAGGGCATCAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: LALVPGIKACLTMLL*MRNLPLSALRASDA Trigger: AGCATCTGATGCCCTAAGGGCAGAAAGAGGGAGATTTCTCATCAAAAGTAACATTGTCAAGCATGCTTTAATTCCTGGAACTAGAGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS CCA 72 bp | ATGACCATATTTAAACAATGCAGGAAGCATGGCACATaGGTAAAACCACCATCTTTGATTGCATGTACCACA | + |
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Preference number: 6 (lower is better) Translates to: MTIFKQCRKHGT*VKPPSLIACTT Trigger: TGTGGTACATGCAATCAAAGATGGTGGTTTTACCCATGTGCCATGCTTCCTGCATTGTTTAAATATGGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS CAA 90 bp | TGGGTAAAACCACCATCTTTGATTGCATGTACCACATTAGAGGAATaGTCAGAAACAATGAAGCTAGGGATAAGGAAATTTGGAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: WVKPPSLIACTTLEE*SETMKLGIRKFGES Trigger: GCTTTCTCCAAATTTCCTTATCCCTAGCTTCATTGTTTCTGACAATTCCTCTAATGTGGTACATGCAATCAAAGATGGTGGTTTTACCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS TCA 72 bp | ATATTCTCAATGCTTTTGTGCTCGCAGAAAAAGTCCTaGATGACCATATTTAAACAATGCAGGAAGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: IFSMLLCSQKKS*MTIFKQCRKHG Trigger: GCCATGCTTCCTGCATTGTTTAAATATGGTCATTCAGGACTTTTTCTGCGAGCACAAAAGCATTGAGAATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000495527.5 ENST00000639812.1 |
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| CDS CAA 90 bp | CTATTATCATCTAATGGATCAGTAGGAATATATTCAAAGCTTCCATaGCTTCCAGAAGAGGGAGATAAAGACACATCCAAGGTAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLSSNGSVGIYSKLP*LPEEGDKDTSKVKS Trigger: GGACTTTACCTTGGATGTGTCTTTATCTCCCTCTTCTGGAAGCAATGGAAGCTTTGAATATATTCCTACTGATCCATTAGATGATAATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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| CDS TCA 72 bp | CATAGTGCATCATTCAACATTCATCATTTAGGACTGTaGTTTGCCAATACAACCCAAAAAGTCAATTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: HSASFNIHHLGL*FANTTQKVNSG Trigger: TCCAGAATTGACTTTTTGGGTTGTATTGGCAAATCACAGTCCTAAATGATGAATGTTGAATGATGCACTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639812.1 |
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