RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H10 (Homo sapiens)

Ensembl gene IDs: ENSG00000135482

Ensembl transcript IDs: ENST00000257940.7, ENST00000546903.1, ENST00000549973.1, ENST00000551880.1, ENST00000552345.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCTCCCAAGCCTTGAAGGCTTCAGGAACTGGCCACTGAAGGGGTaGGGTAGGAGGGACATTAACTGCCATCAACTGAGCGGCAACTGC +
Preference number: 1 (lower is better)
Translates to: DLPSLEGFRNWPLKG*GRRDINCHQLSGNC
Trigger: GCAGTTGCCGCTCAGTTGATGGCAGTTAATGTCCCTCCTACCCCACCCCTTCAGTGGCCAGTTCCTGAAGCCTTCAAGGCTTGGGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR GCA 90 bp GGGTGGGGTAGGAGGGACATTAACTGCCATCAACTGAGCGGCAACTaGCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTT +
Preference number: 1 (lower is better)
Translates to: GWGRRDINCHQLSGN*HQLNGHQLHLSCSV
Trigger: AACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTTAATGTCCCTCCTACCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR GCA 90 bp TTCAGGAACTGGCCACTGAAGGGGTGGGGTAGGAGGGACATTAACTaGCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAA +
Preference number: 1 (lower is better)
Translates to: FRNWPLKGWGRRDIN*HQLSGNCHQLNGHQ
Trigger: TTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTTAATGTCCCTCCTACCCCACCCCTTCAGTGGCCAGTTCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp TCCTTACTGCCTGCCCTGCTAAATGACCCTAGGAGCCCTGGTTACTaGGGCAACCTGGGAATAGCACATACAGACAGAGACCAGAAACAG +
Preference number: 1 (lower is better)
Translates to: SLLPALLNDPRSPGY*GNLGIAHTDRDQKQ
Trigger: CTGTTTCTGGTCTCTGTCTGTATGTGCTATTCCCAGGTTGCCTCAGTAACCAGGGCTCCTAGGGTCATTTAGCAGGGCAGGCAGTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp CCAAAGCCCCATTTGGTCTTGTTCTGGGTCCCTACCCTTCTTCACTaGCTTCTATCCATCTTACCAAAGCTATGTGAGGCTGGGGTCTTT +
Preference number: 1 (lower is better)
Translates to: PKPHLVLFWVPTLLH*LLSILPKLCEAGVF
Trigger: AAAGACCCCAGCCTCACATAGCTTTGGTAAGATGGATAGAAGCCAGTGAAGAAGGGTAGGGACCCAGAACAAGACCAAATGGGGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp ACAATTCTGCTGCCCAGGTGCCACCTGGTGGTGATAAGCAGTAAGTaGACAACAGGAAGGGATGCCCATTTGTTAGAGGAAGTGTCTTAC +
Preference number: 1 (lower is better)
Translates to: TILLPRCHLVVISSK*TTGRDAHLLEEVSY
Trigger: GTAAGACACTTCCTCTAACAAATGGGCATCCCTTCCTGTTGTCCACTTACTGCTTATCACCACCAGGTGGCACCTGGGCAGCAGAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp ACACACCACGTTATCCCCAATGGTGAGCCCTCCCCCTCACTGCAATaGGCATTAAACCCAACTTGCTCAATTACCAGGTGTATTCTTGGT +
Preference number: 1 (lower is better)
Translates to: THHVIPNGEPSPSLQ*ALNPTCSITRCILG
Trigger: ACCAAGAATACACCTGGTAATTGAGCAAGTTGGGTTTAATGCTCATTGCAGTGAGGGGGAGGGCTCACCATTGGGGATAACGTGGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp GTGCAAACCACAAAACAGCAAACATCCCCTTTCCCAGCTAGTGAGTaGCTTCATCATCGACTGTGCTTAGGTTCACTTGTCTGCCCTTCT +
Preference number: 1 (lower is better)
Translates to: VQTTKQQTSPFPASE*LHHRLCLGSLVCPS
Trigger: AGAAGGGCAGACAAGTGAACCTAAGCACAGTCGATGATGAAGTCACTCACTAGCTGGGAAAGGGGATGTTTGCTGTTTTGTGGTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp TATAAACTGAAATTTGCCAAGCACTGGAGTAGGCAAGGAGGTTCCTaGGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCC +
Preference number: 1 (lower is better)
Translates to: YKLKFAKHWSRQGGS*EWGNGEGDLWRFFS
Trigger: GGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTCAGGAACCTCCTTGCCTACTCCAGTGCTTGGCAAATTTCAGTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp GTAGATTTAAAACTTCTGGTCCTATGTGGAGACAGAGGAAAGGGATaGACCCTGAGGCTTGTGTCCCTAGAAGGACTCTCTTTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: VDLKLLVLCGDRGKG*TLRLVSLEGLSFPR
Trigger: TCTGGGAAAAGAGAGTCCTTCTAGGGACACAAGCCTCAGGGTCCATCCCTTTCCTCTGTCTCCACATAGGACCAGAAGTTTTAAATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp GCTATATCATTAGAACTTTCTTTTGTCGTCTGGAGTGAGACTGCCTaGATAGATTCCTGGCCCCATTCCTTACTTGCAGAACCCTGGGCA +
Preference number: 1 (lower is better)
Translates to: AISLELSFVVWSETA*IDSWPHSLLAEPWA
Trigger: TGCCCAGGGTTCTGCAAGTAAGGAATGGGGCCAGGAATCTATTCAGGCAGTCTCACTCCAGACGACAAAAGAAAGTTCTAATGATATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp TGCCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTaGATAAGGATCTGTCAACTATGTAACATCCCATCCGCATTTCAG +
Preference number: 1 (lower is better)
Translates to: CHQLNGHQLHLSCSV*IRICQLCNIPSAFQ
Trigger: CTGAAATGCGGATGGGATGTTACATAGTTGACAGATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp GGTTCACTTGTCTGCCCTTCTTCTAGACAAGCTACCCAATTATCCTaGATTCCCTTAACAGCACCCAATCCAAAAGAACACCCACTTTCT +
Preference number: 1 (lower is better)
Translates to: GSLVCPSSRQATQLS*IPLTAPNPKEHPLS
Trigger: AGAAAGTGGGTGTTCTTTTGGATTGGGTGCTGTTAAGGGAATCCAGGATAATTGGGTAGCTTGTCTAGAAGAAGGGCAGACAAGTGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp TCCATCTTACCAAAGCTATGTGAGGCTGGGGTCTTTATCCCATTTTaGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGC +
Preference number: 1 (lower is better)
Translates to: SILPKLCEAGVFIPF*HEIYLLLPSSTQNS
Trigger: GCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAAATGGGATAAAGACCCCAGCCTCACATAGCTTTGGTAAGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp GAGGGATCAAGAGTAAGGGAAAGACAATTCCTTTTCACATTTGCCTaGGTTAGAAGGAAGGTTTGCCATACAGTCAGGTGCAGAACTAGT +
Preference number: 1 (lower is better)
Translates to: EGSRVRERQFLFTFA*VRRKVCHTVRCRTS
Trigger: ACTAGTTCTGCACCTGACTGTATGGCAAACCTTCCTTCTAACTCAGGCAAATGTGAAAAGGAATTGTCTTTCCCTTACTCTTGATCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp GCAATGAGCATTAAACCCAACTTGCTCAATTACCAGGTGTATTCTTaGTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTC +
Preference number: 1 (lower is better)
Translates to: AMSIKPNLLNYQVYS*WSSAGVNTYKTYNV
Trigger: GACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCACCAAGAATACACCTGGTAATTGAGCAAGTTGGGTTTAATGCTCATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp AAATCCCTTTTTACTTCCTGTGTAGCAAACAGGATCTTCCTCCACTaGGCAGCCCTTCAAATATTTGAAGACTTCTATTTGAAGCTTTCT +
Preference number: 1 (lower is better)
Translates to: KSLFTSCVANRIFLH*AALQIFEDFYLKLS
Trigger: AGAAAGCTTCAAATAGAAGTCTTCAAATATTTGAAGGGCTGCCCAGTGGAGGAAGATCCTGTTTGCTACACAGGAAGTAAAAAGGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp ACCCAACTTGCTCAATTACCAGGTGTATTCTTGGTGGTCTTCAGCTaGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCAAA +
Preference number: 1 (lower is better)
Translates to: TQLAQLPGVFLVVFS*SKYIQDIQCLKFPK
Trigger: TTTGGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCACCAAGAATACACCTGGTAATTGAGCAAGTTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 90 bp ATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTaGCAAGGAGGAAATAAAGTCAGTCAGGATTTGACTGAGAATTCA +
Preference number: 1 (lower is better)
Translates to: IQCLKFPKSTSLEIT*QGGNKVSQDLTENS
Trigger: TGAATTCTCAGTCAAATCCTGACTGACTTTATTTCCTCCTTGCCAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 90 bp GTGAGAGTGCTCCAGTGTTTTAGTCAATTCAAGTTACAGACACTTTaGATATTATTTAGCTCTTCCTGTGTTACTGTTGATAAATGGGTT +
Preference number: 1 (lower is better)
Translates to: VRVLQCFSQFKLQTL*ILFSSSCVTVDKWV
Trigger: AACCCATTTATCAACAGTAACACAGGAAGAGCTAAATAATATTCAAAGTGTCTGTAACTTGAATTGACTAAAACACTGGAGCACTCTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGTCAGGCCTTCTCTCCTaGCCACCCACTTCCCAATCT +
Preference number: 2 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQSGLLS*PPTSQS
Trigger: AGATTGGGAAGTGGGTGGTCAGGAGAGAAGGCCTGA...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGCTCATAAAAGGGAGGTaGGAGAAAACACACCATCCC +
Preference number: 2 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQLIKGR*EKTHHP
Trigger: GGGATGGTGTGTTTTCTCTCACCTCCCTTTTATGAG...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCCCCTTCAGACAGGGATaGGGAAGGCTAGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVPFRQG*GRLGEW
Trigger: CCACTCACCTAGCCTTCCCCATCCCTGTCTGAAGGG...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGGTGATAAGCAGTAAGTaGACAACAGGAAGGGATGCC +
Preference number: 2 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQVISSK*TTGRDA
Trigger: GGCATCCCTTCCTGTTGTCCACTTACTGCTTATCAC...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCCTGCTGGCTTCAGTCTaGACTCCTCTGCAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSLLASV*TPLQAP
Trigger: GGGGGCTTGCAGAGGAGTGCAGACTGAAGCCAGCAG...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCGTTATCCCCAATGGTaGGCCCTCCCCCTCACTGCA +
Preference number: 2 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSRYPQW*ALPLTA
Trigger: TGCAGTGAGGGGGAGGGCTCACCATTGGGGATAACG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGGGAGGAACTGAGGTTTaGCTATTGGGGCCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QGSTTLMELLERCLEHSRGGTEV*LLGPLA
Trigger: GGCCAGGGGCCCCAATAGTCAAACCTCAGTTCCTCC...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCCTTCCCAATCTTTCCTaGCTTTCCCTCTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSLPNLS*LSLWAG
Trigger: CCCTGCCCAGAGGGAAAGCCAGGAAAGATTGGGAAG...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACAGGACCCAAATTGTCTaGAGGCTCCTATCAGGCCTT +
Preference number: 2 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHRTQIV*RLLSGL
Trigger: AAGGCCTGATAGGAGCCTTCAGACAATTTGGGTCCT...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCTTAGGGCTGACCTGGTaGTCACAGGTAGCCAATGAG +
Preference number: 2 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSLGLTW*SQVANE
Trigger: CTCATTGGCTACCTGTGAGCACCAGGTCAGCCCTAA...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCGCCCCATTCCTTACTTaGAGAACCCTGGGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSAPFLT*RTLGRL
Trigger: TAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGGC...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGGAGCTGAGGAGGAACTaGGGTTTGACTATTGGGGCC +
Preference number: 2 (lower is better)
Translates to: QGSTTLMELLERCLEHSRELRRN*GLTIGA
Trigger: GGCCCCAATAGTCAAACCTCAGTTCCTCCTCAGCTC...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTTGGGTCCCCGCCCACTaGCAATTCTGCTGCCCAGGT +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSWVPAH*QFCCPG
Trigger: ACCTGGGCAGCAGAATTGTCAGTGGGCGGGGACCCA...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTTCAGTCCTTCCTCTCTaGTGGCTTCAGTCTGCACTC +
Preference number: 2 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSSVLPL*WLQSAL
Trigger: GAGTGCAGACTGAAGCCAGCAGAGAGGAAGGACTGA...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCAGTGCTGGAACCTGTaGTGTGCAGAAGAGAGGACA +
Preference number: 2 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSQCWNL*CAEERT
Trigger: TGTCCTCTCTTCTGCACAGCACAGGTTCCAGCACTG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGTGCTCCCCTAGTCTTTaGGCTGGAGCACTATGGTCC +
Preference number: 2 (lower is better)
Translates to: QGSTTLMELLERCLEHSRCSPSL*AGALWS
Trigger: GGACCATAGTGCTCCAGCCCAAAGACTAGGGGAGCA...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTCAAATGCTAGCCGGCTaGGTGCGGTGGCTCAACGCC +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSQMLAG*VRWLNA
Trigger: GGCGTTGAGCCACCGCACCCAGCCGGCTAGCATTTG...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CAA 90 bp AGAAGCAATTCCTGTATTGTCCAACCCAAGCAACTAGGACCCAAATaGTCTGAAGGCTCCTATCAGGCCTTCTCTCCTGACCACCCACTT +
Preference number: 2 (lower is better)
Translates to: RSNSCIVQPKQLGPK*SEGSYQAFSPDHPL
Trigger: AAGTGGGTGGTCAGGAGAGAAGGCCTGATAGGAGCCTTCAGACAATTTGGGTCCTAGTTGCTTGGGTTGGACAATACAGGAATTGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGGGGAAGGCTAGGTaGGTGGGCAAGGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKMGKAR*VGKGPL
Trigger: CAGGGGGCCCTTGCCCACTCACCTAGCCTTCCCCAT...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGCTGGAACCTGTGCTGTaGAGAAGAGAGGACAAGACG +
Preference number: 2 (lower is better)
Translates to: QGSTTLMELLERCLEHSRLEPVL*RREDKT
Trigger: CGTCTTGTCCTCTCTTCTGCACAGCACAGGTTCCAG...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCAACTGAGCGGCAACTaGCATCAACTCAATGGCCAT +
Preference number: 2 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSQLSGN*HQLNGH
Trigger: ATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGCTCCGGTCTGGTGACTaGGCAAGACTCCATCTCAAA +
Preference number: 2 (lower is better)
Translates to: QGSTTLMELLERCLEHSRLRSGD*ARLHLK
Trigger: TTTGAGATGGAGTCTTGCCCAGTCACCAGACCGGAG...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCATTAGCCGAGCATGGTaGCATGTACCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSISRAW*HVPVIP
Trigger: TGGGATTACAGGTACATGCCACCATGCTCGGCTAAT...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAGACCTCCCAAGCCTTaGAGGCTTCAGGAACTGGCC +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSRPPKP*RLQELA
Trigger: GGCCAGTTCCTGAAGCCTTCAAGGCTTGGGAGGTCT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTCAGAGATCGTGCCACTaGACTGAAGCCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSQRSCH*TEAWAT
Trigger: TGTGGCCCAGGCTTCAGTGCAGTGGCACGATCTCTG...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCATTTGGTCTTGTTCTaGGTCCCTACCCTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSHLVLF*VPTLLH
Trigger: GTGAAGAAGGGTAGGGACCCAGAACAAGACCAAATG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGCTGCCATCAACTCAATaGCCATCAACTCCACCTGTC +
Preference number: 2 (lower is better)
Translates to: QGSTTLMELLERCLEHSRLPSTQ*PSTPPV
Trigger: GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAG...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCTTGAAGACTTCTATTTaGAGCTTTCTCTTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSLKTSI*SFLLPA
Trigger: GGCTGGCAAGAGAAAGCTTCAAATAGAAGTCTTCAA...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGTGCACTCCGGTCTGGTaGCTGGGCAAGACTCCATCT +
Preference number: 2 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKCTPVW*LGKTPS
Trigger: AGATGGAGTCTTGCCCAGTCACCAGACCGGAGTGCA...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGCGCAAGAGAATCGCTTaGACCCAGGAGGCGCAGGTT +
Preference number: 2 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKRKRIA*TQEAQV
Trigger: AACCTGCGCCTCCTGGGTTCAAGCGATTCTCTTGCG...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTTGGAGTGAGACTGCCTaGATAGATTCCTGGCCCCAT +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSWSETA*IDSWPH
Trigger: ATGGGGCCAGGAATCTATTCAGGCAGTCTCACTCCA...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGTGGGCTGGAGCACTATaGTCCCAGCTTTCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLWAGAL*SQLSQG
Trigger: GCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCCCA...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCGTCTTTATCCCATTTTaGCATGAGATCTATTTACTG +
Preference number: 2 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVVFIPF*HEIYLL
Trigger: CAGTAAATAGATCTCATGCCAAAATGGGATAAAGAC...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCTGCAAGCCCCCACTGTaGGGCTTGAAGATGGACAAG +
Preference number: 2 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPCKPPL*GLKMDK
Trigger: CTTGTCCATCTTCAAGCCTCACAGTGGGGGCTTGCA...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTAAGTCAGTCAGGATTTaGCTGAGAATTCATGTTGGT +
Preference number: 2 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSKSVRI*LRIHVG
Trigger: ACCAACATGAATTCTCAGTCAAATCCTGACTGACTT...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTTCCCCCTCACTGCAATaGGCATTAAACCCAACTTGC +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSSPSLQ*ALNPTC
Trigger: GCAAGTTGGGTTTAATGCTCATTGCAGTGAGGGGGA...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGGAACACCCACTTTCTTaGATCTTCCCCAAAATCACT +
Preference number: 2 (lower is better)
Translates to: QGSTTLMELLERCLEHSREHPLS*IFPKIT
Trigger: AGTGATTTTGGGGAAGATTCAAGAAAGTGGGTGTTC...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCACAGTGAACCGAGATTaGGCCACTGCACTCCGGTCT +
Preference number: 2 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPTVNRD*ATALRS
Trigger: AGACCGGAGTGCAGTGGCGCAATCTCGGTTCACTGT...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCGACAGAGGAAAGGGATaGACCCTGAGGCTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPDRGKG*TLRLVS
Trigger: GGACACAAGCCTCAGGGTCCATCCCTTTCCTCTGTC...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTATCCCAGATGTGACCTaGGTGATCAACCAGACAAGA +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSIPDVT*VINQTR
Trigger: TCTTGTCTGGTTGATCACTCAGGTCACATCTGGGAT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTCTCACAGGTAGCCAATaGGTTCTCTTGGACACAAAC +
Preference number: 2 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSLTGSQ*VLLDTN
Trigger: GTTTGTGTCCAAGAGAACTCATTGGCTACCTGTGAG...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCCCCAAAGCCCCATTTaGTCTTGTTCTGGGTCCCTA +
Preference number: 2 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPPQSPI*SCSGSL
Trigger: TAGGGACCCAGAACAAGACCAAATGGGGCTTTGGGG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CAA 90 bp CGGTACTCTGATCTCAGCTCACAAAGATGGGAAGGGCAACAAGATTaGAGGAAACTCCTTCTGTATTCTTTATTCCTCAAAAGTTACTGC +
Preference number: 2 (lower is better)
Translates to: RYSDLSSQRWEGQQD*RKLLLYSLFLKSYC
Trigger: GCAGTAACTTTTGAGGAATAAAGAATACAGAAGGAGTTTCCTCAAATCTTGTTGCCCTTCCCATCTTTGTGAGCTGAGATCAGAGTACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGCTTACCAAAGCTATGTaGGGCTGGGGTCTTTATCCC +
Preference number: 2 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKLTKAM*GWGLYP
Trigger: GGGATAAAGACCCCAGCCTCACATAGCTTTGGTAAG...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGACTGTCCTGCTCTGTTTaGATAAGGATCTGTCAACTA +
Preference number: 2 (lower is better)
Translates to: VANEFSWTQTISQNTSIRLSCSV*IRICQL
Trigger: TAGTTGACAGATCCTTATTCAAACAGAGCAGGACAG...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCGAAAGTAGTGGGCCCTaGCCTATGGATTTTCAGGTC +
Preference number: 2 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPESSGP*PMDFQV
Trigger: GACCTGAAAATCCATAGGGCAGGGCCCACTACTTTC...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGAGGAGGGACATTAACTaGCATCAACTGAGCGGCAAC +
Preference number: 2 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKRRDIN*HQLSGN
Trigger: GTTGCCGCTCAGTTGATGGCAGTTAATGTCCCTCCT...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAGTTCTTTTATTTCTTTaGAAAGTAGTGGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQVLLFL*KVVGPA
Trigger: GGCAGGGCCCACTACTTTCCAAAGAAATAAAAGAAC...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CAA 90 bp TCTTTGGAGATAACCTGGCAAGGAGGAAATAAAGTCAGTCAGGATTaGACTGAGAATTCATGTTGGTATCTATGGTTACATTCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: SLEITWQGGNKVSQD*TENSCWYLWLHSSL
Trigger: TAGAGAAGAATGTAACCATAGATACCAACATGAATTCTCAGTCAAATCCTGACTGACTTTATTTCCTCCTTGCCAGGTTATCTCCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR GCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGAGATCTATTTACTaGTCCCATCTTCCACACAGA +
Preference number: 2 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKMRSIY*SHLPHR
Trigger: TCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCAT...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCTCTTTGGAGATAACCTaGCAAGGAGGAAATAAAGTC +
Preference number: 2 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPSLEIT*QGGNKV
Trigger: GACTTTATTTCCTCCTTGCCAGGTTATCTCCAAAGA...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp GAGAGGAAAGTAGCTCCTGTAATCTGGGAACTGGCCTaGCACAGCCAGGCTTCAGAGCTGTTAGGGCTGACC +
Preference number: 3 (lower is better)
Translates to: ERKVAPVIWELA*HSQASELLGLT
Trigger: GGTCAGCCCTAACAGCTCTGAAGCCTGGCTGTGTCAGGCCAGTTCCCAGATTACAGGAGCTACTTTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp AGCCTTGAAGGCTTCAGGAACTGGCCACTGAAGGGGTaGGGTAGGAGGGACATTAACTGCCATCAACTGAGC +
Preference number: 3 (lower is better)
Translates to: SLEGFRNWPLKG*GRRDINCHQLS
Trigger: GCTCAGTTGATGGCAGTTAATGTCCCTCCTACCCCACCCCTTCAGTGGCCAGTTCCTGAAGCCTTCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp CCTGCCCTGCTAAATGACCCTAGGAGCCCTGGTTACTaGGGCAACCTGGGAATAGCACATACAGACAGAGAC +
Preference number: 3 (lower is better)
Translates to: PALLNDPRSPGY*GNLGIAHTDRD
Trigger: GTCTCTGTCTGTATGTGCTATTCCCAGGTTGCCTCAGTAACCAGGGCTCCTAGGGTCATTTAGCAGGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp AGGGGTGGGGTAGGAGGGACATTAACTGCCATCAACTaGGCGGCAACTGCCATCAACTCAATGGCCATCAAC +
Preference number: 3 (lower is better)
Translates to: RGGVGGTLTAIN*AATAINSMAIN
Trigger: GTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTTAATGTCCCTCCTACCCCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp AAATTTGCCAAGCACTGGAGTAGGCAAGGAGGTTCCTaGGAATGGGGGAATGGAGAGGGTGACCTATGGAGG +
Preference number: 3 (lower is better)
Translates to: KFAKHWSRQGGS*EWGNGEGDLWR
Trigger: CCTCCATAGGTCACCCTCTCCATTCCCCCATTCTCAGGAACCTCCTTGCCTACTCCAGTGCTTGGCAAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR GCA 72 bp AGGAGGGACATTAACTGCCATCAACTGAGCGGCAACTaGCATCAACTCAATGGCCATCAACTCCACCTGTCC +
Preference number: 3 (lower is better)
Translates to: RRDINCHQLSGN*HQLNGHQLHLS
Trigger: GGACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTTAATGTCCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp CTGCCCAGGTGCCACCTGGTGGTGATAAGCAGTAAGTaGACAACAGGAAGGGATGCCCATTTGTTAGAGGAA +
Preference number: 3 (lower is better)
Translates to: LPRCHLVVISSK*TTGRDAHLLEE
Trigger: TTCCTCTAACAAATGGGCATCCCTTCCTGTTGTCCACTTACTGCTTATCACCACCAGGTGGCACCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGAAAGTCAGTCAGGATTaGACTGAGAATTCATGTTGG +
Preference number: 3 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQKVSQD*TENSCW
Trigger: CCAACATGAATTCTCAGTCAAATCCTGACTGACTTT...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCCAACTAGGACCCAAATaGTCTGAAGGCTCCTATCAG +
Preference number: 3 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVQLGPK*SEGSYQ
Trigger: CTGATAGGAGCCTTCAGACAATTTGGGTCCTAGTTG...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp GCAAGGAGGTTCCTGAGAATGGGGGAATGGAGAGGGTaGCCTATGGAGGTTCTTTTCCAAACTTCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: ARRFLRMGEWRG*PMEVLFQTSPF
Trigger: GAAGGGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTCAGGAACCTCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp AAAGTGCCTTCCCCAAAGCCCCATTTGGTCTTGTTCTaGGTCCCTACCCTTCTTCACTGGCTTCTATCCATC +
Preference number: 3 (lower is better)
Translates to: KVPSPKPHLVLF*VPTLLHWLLSI
Trigger: GATGGATAGAAGCCAGTGAAGAAGGGTAGGGACCCAGAACAAGACCAAATGGGGCTTTGGGGAAGGCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp CTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATaGCCATCAACTCCACCTGTCCTGCTCTGTTTGAAT +
Preference number: 3 (lower is better)
Translates to: LPSTERQLPSTQ*PSTPPVLLCLN
Trigger: ATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp GTTATCCCCAATGGTGAGCCCTCCCCCTCACTGCAATaGGCATTAAACCCAACTTGCTCAATTACCAGGTGT +
Preference number: 3 (lower is better)
Translates to: VIPNGEPSPSLQ*ALNPTCSITRC
Trigger: ACACCTGGTAATTGAGCAAGTTGGGTTTAATGCTCATTGCAGTGAGGGGGAGGGCTCACCATTGGGGATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp GCTGTTAGGGCTGACCTGGTGCTCACAGGTAGCCAATaGGTTCTCTTGGACACAAACAATCTCACAAAACAC +
Preference number: 3 (lower is better)
Translates to: AVRADLVLTGSQ*VLLDTNNLTKH
Trigger: GTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTACCTGTGAGCACCAGGTCAGCCCTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAAAGCCCCATTTGGTCTaGTTCTGGGTCCCTACCCTT +
Preference number: 3 (lower is better)
Translates to: VANEFSWTQTISQNTSIRKPHLV*FWVPTL
Trigger: AAGGGTAGGGACCCAGAACAAGACCAAATGGGGCTT...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp CATTTGGTCTTGTTCTGGGTCCCTACCCTTCTTCACTaGCTTCTATCCATCTTACCAAAGCTATGTGAGGCT +
Preference number: 3 (lower is better)
Translates to: HLVLFWVPTLLH*LLSILPKLCEA
Trigger: AGCCTCACATAGCTTTGGTAAGATGGATAGAAGCCAGTGAAGAAGGGTAGGGACCCAGAACAAGACCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp CTGACCTGGTGCTCACAGGTAGCCAATGAGTTCTCTTaGACACAAACAATCTCACAAAACACCAGCATCAGA +
Preference number: 3 (lower is better)
Translates to: LTWCSQVANEFS*TQTISQNTSIR
Trigger: TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTACCTGTGAGCACCAGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCTTTGAAGACTTCTATTaGAAGCTTTCTCTTGCCAGC +
Preference number: 3 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSFEDFY*KLSLAS
Trigger: GCTGGCAAGAGAAAGCTTCAAATAGAAGTCTTCAAA...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp CTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTaGATAAGGATCTGTCAACTATGTAACATCCCATCC +
Preference number: 3 (lower is better)
Translates to: LNGHQLHLSCSV*IRICQLCNIPS
Trigger: GGATGGGATGTTACATAGTTGACAGATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp GTCTGCCCTTCTTCTAGACAAGCTACCCAATTATCCTaGATTCCCTTAACAGCACCCAATCCAAAAGAACAC +
Preference number: 3 (lower is better)
Translates to: VCPSSRQATQLS*IPLTAPNPKEH
Trigger: GTGTTCTTTTGGATTGGGTGCTGTTAAGGGAATCCAGGATAATTGGGTAGCTTGTCTAGAAGAAGGGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGACGCAAGAGAATCGCTaGAACCCAGGAGGCGCAGGT +
Preference number: 3 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLTQENR*NPGGAG
Trigger: ACCTGCGCCTCCTGGGTTCAAGCGATTCTCTTGCGT...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR TCA 72 bp TTAGAACTTTCTTTTGTCGTCTGGAGTGAGACTGCCTaGATAGATTCCTGGCCCCATTCCTTACTTGCAGAA +
Preference number: 3 (lower is better)
Translates to: LELSFVVWSETA*IDSWPHSLLAE
Trigger: TTCTGCAAGTAAGGAATGGGGCCAGGAATCTATTCAGGCAGTCTCACTCCAGACGACAAAAGAAAGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAGGGCTAGCAGTATCTaGACTGCTTCATTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSRASSI*TASFSL
Trigger: CAAACTGAATGAAGCAGTCAAGATACTGCTAGCCCT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR GCA 72 bp GGGTCTTTATCCCATTTTGGCATGAGATCTATTTACTaGTCCCATCTTCCACACAGAATAGCTAAGCAAGTT +
Preference number: 3 (lower is better)
Translates to: GSLSHFGMRSIY*SHLPHRIAKQV
Trigger: AACTTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAAATGGGATAAAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR GCA 72 bp CAGTATATATGGGGCATATTATGTAAATCTGTCAGATaGAGCAGAAGAACTGGGGTTGATCACTGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: QYIWGILCKSVR*SRRTGVDHWEE
Trigger: TTCTTCCCAGTGATCAACCCCAGTTCTTCTGCTGCATCTGACAGATTTACATAATATGCCCCATATATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp TTTACTTCCTGTGTAGCAAACAGGATCTTCCTCCACTaGGCAGCCCTTCAAATATTTGAAGACTTCTATTTG +
Preference number: 3 (lower is better)
Translates to: FTSCVANRIFLH*AALQIFEDFYL
Trigger: CAAATAGAAGTCTTCAAATATTTGAAGGGCTGCCCAGTGGAGGAAGATCCTGTTTGCTACACAGGAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAAGCATTAAACCCAACTaGCTCAATTACCAGGTGTAT +
Preference number: 3 (lower is better)
Translates to: VANEFSWTQTISQNTSIRSIKPN*LNYQVY
Trigger: ATACACCTGGTAATTGAGCAAGTTGGGTTTAATGCT...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTACTGGAAGTCCCAGTTaGTTCTCATGTGAATTATTG +
Preference number: 3 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSTGSPS*FSCELL
Trigger: CAATAATTCACATGAGAACAAACTGGGACTTCCAGT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp AAACCCAACTTGCTCAATTACCAGGTGTATTCTTGGTaGTCTTCAGCTGGAGTAAATACATACAAGACATAC +
Preference number: 3 (lower is better)
Translates to: KPNLLNYQVYSW*SSAGVNTYKTY
Trigger: GTATGTCTTGTATGTATTTACTCCAGCTGAAGACCACCAAGAATACACCTGGTAATTGAGCAAGTTGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR-3UTR CAA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGCCTGTCCTGCTCTGTTaGAATAAGGATCTGTCAACT +
Preference number: 3 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLPVLLC*NKDLST
Trigger: AGTTGACAGATCCTTATTCAAACAGAGCAGGACAGG...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp CTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTaGCAAGGAGGAAATAAAGTCAGTCAGGATTTGACT +
Preference number: 3 (lower is better)
Translates to: LKFPKSTSLEIT*QGGNKVSQDLT
Trigger: AGTCAAATCCTGACTGACTTTATTTCCTCCTTGCCAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp ATTAAACCCAACTTGCTCAATTACCAGGTGTATTCTTaGTGGTCTTCAGCTGGAGTAAATACATACAAGACA +
Preference number: 3 (lower is better)
Translates to: IKPNLLNYQVYS*WSSAGVNTYKT
Trigger: TGTCTTGTATGTATTTACTCCAGCTGAAGACCACCAAGAATACACCTGGTAATTGAGCAAGTTGGGTTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp GCTCAATTACCAGGTGTATTCTTGGTGGTCTTCAGCTaGAGTAAATACATACAAGACATACAATGTCTAAAA +
Preference number: 3 (lower is better)
Translates to: AQLPGVFLVVFS*SKYIQDIQCLK
Trigger: TTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCACCAAGAATACACCTGGTAATTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CCA 72 bp AGTCAGGATTTGACTGAGAATTCATGTTGGTATCTATaGTTACATTCTTCTCTAAATGCTCTTAAACCATCT +
Preference number: 3 (lower is better)
Translates to: SQDLTENSCWYL*LHSSLNALKPS
Trigger: AGATGGTTTAAGAGCATTTAGAGAAGAATGTAACCATAGATACCAACATGAATTCTCAGTCAAATCCTGACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGCCTCCACATCACTGCTaGGTTCTGCCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQPPHHC*VLPPPP
Trigger: CGGCGGCGGCGGCAGAACCCAGCAGTGATGTGGAGG...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGCCCGGTCAGGCATCCTaGTCCCGCCCAACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQPGQAS*SRPTQG
Trigger: ACCCTGAGTTGGGCGGGACCAGGATGCCTGACCGGG...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGTGCACTCCGGTCTGGTaGCTGGGCAAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQCTPVW*LGKTPS
Trigger: AGATGGAGTCTTGCCCAGTCACCAGACCGGAGTGCA...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGGCCACCAGTTCTTGCTaGGACACTGGACGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQATSSC*DTGRGC
Trigger: ACAGCCTCGTCCAGTGTCCCAGCAAGAACTGGTGGC...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGAGGTGCAGCATTAGTTaGGGGAGCAGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQRCSIS*GSSWSS
Trigger: GGAGCTCCAGCTGCTCCCCCAACTAATGCTGCACCT...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTTGCTGCTGCCGCCTaGCGGTCCTCTAGCTTCGAC +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIVAAAA*RSSSFD
Trigger: GTCGAAGCTAGAGGACCGGCAGGCGGCAGCAGCAAC...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCACTGGCCTCCTCGCTaGCACCACCTCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHHWPPR*HHLQGL
Trigger: GAGGCCCTGGAGGTGGTGGCAGCGAGGAGGCCAGTG...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGGGAGACAGGTGGAGGTaGCATTCCCTGGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQGDRWR*HSLGNC
Trigger: ACAATTGCCCAGGGAATGGCACCTCCACCTGTCTCC...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGTGCTCACCCCCAAGTTaGACACCTCGCTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQCSPPS*TPRSCL
Trigger: CAGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCA...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGTTTGGGCCTGGCTCATaGTCCTCAAAGCCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQFGPGS*SSKPLS
Trigger: TGACAGGGGCTTTGAGGACCATGAGCCAGGCCCAAA...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGAAATCCCGTTGCAGGTaGCGGAACTTGCACTTGGCT +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQKSRCR*RNLHLA
Trigger: AGCCAAGTGCAAGTTCCGTCACCTGCAACGGGATTT...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCGCCACTGCCTACCCCTaGCCCACTGGCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSATAYP*PTGLLA
Trigger: AGCGAGGAGGCCAGTGGGGCAGGGGTAGGCAGTGGC...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCCTACCCCTGCCCCACTaGCCTCCTCGCTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSLPLPH*PPRCHH
Trigger: GTGGTGGCAGCGAGGAGGCCAGTGGGGCAGGGGTAG...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGATTCCTGCCAAGGGTTaGGCCATCGATACAGCCACA +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQIPAKG*AIDTAT
Trigger: TGTGGCTGTATCGATGGCCCAACCCTTGGCAGGAAT...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATCGCCGCCGTAGTTGCTaGTGCCGCCTGCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDRRRSC*CRLPVL
Trigger: GAGGACCGGCAGGCGGCAGCAGCAACTACGGCGGCG...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCCCACCTCCACATCACTaGTGGGTTCTGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSPPPHH*WVLPPP
Trigger: CGGCGGCGGCAGAACCCAGCAGTGATGTGGAGGTGG...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCTGGGCTGGAGCACTATaGTCCCAGCTTTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVWAGAL*SQLSQG
Trigger: GCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCCCA...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTATGGGGAAGGCTAGGTaGGTGGGCAAGGGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSMGKAR*VGKGPL
Trigger: CAGGGGGCCCTTGCCCACTCACCTAGCCTTCCCCAT...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTAGGCAAGGAGGTTCCTaGGAATGGGGGAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIRQGGS*EWGNGE
Trigger: CTCTCCATTCCCCCATTCTCAGGAACCTCCTTGCCT...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCTGGAGCAGCAGGAGGTaGAGCATTAGTTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTWSSRR*SISWGS
Trigger: GCTCCCCCAACTAATGCTGCACCTCCTGCTGCTCCA...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGCACAGGATCAGCAGCTaGAATGCAGTTACCAACACA +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQHRISS*NAVTNT
Trigger: TGTGTTGGTAACTGCATTGCAGCTGCTGATCCTGTG...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCCAAATGCTAGCCGGCTaGGTGCGGTGGCTCAACGCC +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSQMLAG*VRWLNA
Trigger: GGCGTTGAGCCACCGCACCCAGCCGGCTAGCATTTG...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCAGGCGGAGGCTGCAGTaGGCCGAGATCACGCCACTA +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSRRRLQ*AEITPL
Trigger: TAGTGGCGTGATCTCGGCCCACTGCAGCCTCCGCCT...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCCTTGGAGCCATGGATaGAACGGCAATTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHPWSHG*NGNLGG
Trigger: GCCGCCCAAATTGCCGTTTCATCCATGGCTCCAAGG...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTCACTTGGCTCCTCTCTaGCAGTCACCCTTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIHLAPL*QSPLRK
Trigger: CTTTCTCAAGGGTGACTGTCAGAGAGGAGCCAAGTG...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCCTCTACCCGCTTCCTaGGCATGGCATTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHPLPAS*AWHSPP
Trigger: AGGAGGAGAATGCCATGCTCAGGAAGCGGGTAGAGG...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCTGCAAGCCCCCACTGTaGGGCTTGAAGATGGACAAG +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVCKPPL*GLKMDK
Trigger: CTTGTCCATCTTCAAGCCTCACAGTGGGGGCTTGCA...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACATCTGGGAACTGGCCTaGCACAGCCAGGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHIWELA*HSQASE
Trigger: CTCTGAAGCCTGGCTGTGTCAGGCCAGTTCCCAGAT...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGCAGAAGGAACATGGATaGACCTTAGAGAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQQKEHG*TLERNL
Trigger: GAGGTTTCTCTCTAAGGTTCATCCATGTTCCTTCTG...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGTGGAGGAATTATGAGTaGCCTGCTCACCAACTGATA +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQWRNYE*PAHQLI
Trigger: TATCAGTTGGTGAGCAGGTCACTCATAATTCCTCCA...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTCGCCGCCGCCGTAGTTaGTGCTGCCGCCTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSRRRRS*CCRLPV
Trigger: GACCGGCAGGCGGCAGCAGCAACTACGGCGGCGGCG...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCCTCCTCTAGCAGTCTaGACTCCACCCCTCGCGGTG +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSPPLAV*TPPLAV
Trigger: CACCGCGAGGGGTGGAGTGCAGACTGCTAGAGGAGG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCCTGCTCAGTCGCTGGTaGAGTGGAGCTCAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTLLSRW*SGAQGY
Trigger: ATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAG...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CATCCTCAGGAAGTTCTTGTCCCAGCTGGGGCCCAGGAGCCACAGGATCAGCAGGAACACCCACTTTCTTaGATCTTCCCCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: HPQEVLVPAGAQEPQDQQEHPLS*IFPKIT
Trigger: AGTGATTTTGGGGAAGATTCAAGAAAGTGGGTGTTC...CTGCTGATCCTGTGGCTCCTGGGCCCCAGCTGGGACAAGAACTTCCTGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATGGGGCCACCAGTTCTTaGTGGGACACTGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDGATSS*WDTGRG
Trigger: GCCTCGTCCAGTGTCCCAGCAAGAACTGGTGGCCCC...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCTGCTGGCTTCAGTCTaGACTCCTCTGCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSLLASV*TPLQAP
Trigger: GGGGGCTTGCAGAGGAGTGCAGACTGAAGCCAGCAG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTCAACTGAGCGGCAACTaGCATCAACTCAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIQLSGN*HQLNGH
Trigger: ATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTG...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCCCCTTCAGACAGGGATaGGGAAGGCTAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSPFRQG*GRLGEW
Trigger: CCACTCACCTAGCCTTCCCCATCCCTGTCTGAAGGG...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACTGCTCCCCTAGTCTTTaGGCTGGAGCACTATGGTCC +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHCSPSL*AGALWS
Trigger: GGACCATAGTGCTCCAGCCCAAAGACTAGGGGAGCA...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACTGGCCACTGAAGGGGTaGGGTAGGAGGGACATTAAC +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHWPLKG*GRRDIN
Trigger: GTTAATGTCCCTCCTACCCCACCCCTTCAGTGGCCA...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCCTCCGGTCTGGTGACTaGGCAAGACTCCATCTCAAA +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVLRSGD*ARLHLK
Trigger: TTTGAGATGGAGTCTTGCCCAGTCACCAGACCGGAG...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGGATGTAAGACTAGTTaGCTCCAAAAGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIGCKTS*LQKGGR
Trigger: CCTCCCTCCCTTTTGGAGCCAACTAGTCTTACATCC...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATTTGAGCCAGGGCAGCTaGCAGTGGCGTGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDLSQGS*QWRDLW
Trigger: CCAGAGATCACGCCACTGTCAGCTGCCCTGGCTCAA...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCAGGAGCCCTGGTTACTaGGGCAACCTGGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSRSPGY*GNLGIA
Trigger: TGCTATTCCCAGGTTGCCTCAGTAACCAGGGCTCCT...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCTTTAATGACTGGCCTTaGCCTAGCCCACCATCTCCA +
Preference number: 4 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTFNDWP*PSPPSP
Trigger: TGGAGATGGTGGGCTAGGTCAAGGCCAGTCATTAAA...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTAGCAGGTTGCTGACCTaGTTCTTTAACTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCISRLLT*FFNSST
Trigger: GGTAGAGGAGTTAAAGAAGCAGGTCAGCAACCTGCT...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACGCTCATTGTGATTCCTaGCAAGGGTTGGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHAHCDS*QGLGHR
Trigger: TCGATGGCCCAACCCTTGGCAGGAATCACAATGAGC...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCACAGTGAACCGAGATTaGGCCACTGCACTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSTVNRD*ATALRS
Trigger: AGACCGGAGTGCAGTGGCGCAATCTCGGTTCACTGT...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCCCTGGAGGCAGAGTTTaGAGTGAGCAGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSPGGRV*SEQRSC
Trigger: GCACGATCTCTGCTCACTGCAAACTCTGCCTCCAGG...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACTTCCTCAAAAGTTACTaGCAAGCCAGTCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHFLKSY*QASRGG
Trigger: GCCACCGCGACTGGCTTGGCAGTAACTTTTGAGGAA...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGAGTCCGGGGCTCCTGTaGGTCTCCACCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRSPGLL*VSTSTS
Trigger: TGATGTGGAGGTGGAGACCCACAGGAGCCCCGGACT...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATTGCTCCCGGTACCGTTaGCATAGCTGTCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDCSRYR*HSCPGQ
Trigger: CTGACCGGGACAGCTATGCCAACGGTACCGGGAGCA...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCTCCTCCTTGGAGCCATaGATGAAACGGCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTSSLEP*MKRQFG
Trigger: CCCAAATTGCCGTTTCATCCATGGCTCCAAGGAGGA...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATCCGGCGTTTTGGGCCTaGCTCATGGTCCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDPAFWA*LMVLKA
Trigger: GGCTTTGAGGACCATGAGCCAGGCCCAAAACGCCGG...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCCTGCCATCAACTCAATaGCCATCAACTCCACCTGTC +
Preference number: 4 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTLPSTQ*PSTPPV
Trigger: GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAG...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCGACAGAGGAAAGGGATaGACCCTGAGGCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSDRGKG*TLRLVS
Trigger: GGACACAAGCCTCAGGGTCCATCCCTTTCCTCTGTC...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTACTTCTGGTCCTATGTaGAGACAGAGGAAAGGGATG +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCITSGPM*RQRKGM
Trigger: CATCCCTTTCCTCTGTCTCCACATAGGACCAGAAGT...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTATTAGCCGAGCATGGTaGCATGTACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIISRAW*HVPVIP
Trigger: TGGGATTACAGGTACATGCCACCATGCTCGGCTAAT...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGCCCTGGGCAATTGTTTaGGCCAGGGCAGCTGACAGT +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRPWAIV*ARAADS
Trigger: ACTGTCAGCTGCCCTGGCTCAAACAATTGCCCAGGG...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTTCAGGCCTTCTCTCCTaGCCACCCACTTCCCAATCT +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSSGLLS*PPTSQS
Trigger: AGATTGGGAAGTGGGTGGTCAGGAGAGAAGGCCTGA...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGATCAGGAACTGGCCACTaGAGGGGTGGGGTAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRSGTGH*RGGVGG
Trigger: CCCTCCTACCCCACCCCTTCAGTGGCCAGTTCCTGA...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGATTGAGCCCCCACCAGTaGCTCCTCCACCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRLSPHQ*LLHPEH
Trigger: ATGCTCGGGGTGGAGGAGGCACTGGTGGGGGCTCAA...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGCACCTCGCTCATGTCTaGGTGGCGATATCGGCAACG +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRHLAHV*VAISAT
Trigger: CGTTGCCGATATCGCCACCCAGACATGAGCGAGGTG...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGAGTCTGCTCAGTCGCTaGTGCAGTGGAGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRSLLSR*CSGAQG
Trigger: ACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACT...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCCATTTGGTCTTGTTCTaGGTCCCTACCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVHLVLF*VPTLLH
Trigger: GTGAAGAAGGGTAGGGACCCAGAACAAGACCAAATG...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAATCTACAGATGGCATCTaGGCTGGCCCCGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQSTDGI*AGPATA
Trigger: GGCAGTGGCGGGGCCAGCTCAGATGCCATCTGTAGA...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATTGGTGTGGCTCATTGTaGTTCCTGCCAAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDWCGSL*FLPRVG
Trigger: CCCAACCCTTGGCAGGAATCACAATGAGCCACACCA...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTCTGTCCTGCTCTGTTTaGATAAGGATCTGTCAACTA +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCILSCSV*IRICQL
Trigger: TAGTTGACAGATCCTTATTCAAACAGAGCAGGACAG...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCTTAACTGCCATCAACTaGGCGGCAACTGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSLTAIN*AATAIN
Trigger: GTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTTAA...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCAAGTGTCTTACAGGATaGGGCCTGCAGCTGATAAAT +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVKCLTG*GLQLIN
Trigger: ATTTATCAGCTGCAGGCCTCATCCTGTAAGACACTT...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATGCAGGTGACGGAACTTaGACTTGGCTCCTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDAGDGT*TWLLSD
Trigger: GTCAGAGAGGAGCCAAGTGCAAGTTCCGTCACCTGC...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTTGTGTTTACCAAAGCTaGTTAAAACCTGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCICVYQS*LKPVPA
Trigger: AGCAGGGACAGGTTTTAAGCAGCTTTGGTAAACACA...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAGATGGCATCTGAGCTaGCCCCGCCACTGCCTACCC +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSRWHLS*PRHCLP
Trigger: GGGTAGGCAGTGGCGGGGCCAGCTCAGATGCCATCT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATTCGCTCATGTCTGGGTaGCGATATCGGCAACGCTTG +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDSLMSG*RYRQRL
Trigger: CAAGCGTTGCCGATATCGCCACCCAGACATGAGCGA...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTGACGGAACTTGCACTTaGCTCCTCTCTGACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSDGTCT*LLSDSH
Trigger: GTGACTGTCAGAGAGGAGCCAAGTGCAAGTTCCGTC...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACGTGATAAGCAGTAAGTaGACAACAGGAAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHVISSK*TTGRDA
Trigger: GGCATCCCTTCCTGTTGTCCACTTACTGCTTATCAC...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CAA 72 bp TCCTGTATTGTCCAACCCAAGCAACTAGGACCCAAATaGTCTGAAGGCTCCTATCAGGCCTTCTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SCIVQPKQLGPK*SEGSYQAFSPD
Trigger: GTCAGGAGAGAAGGCCTGATAGGAGCCTTCAGACAATTTGGGTCCTAGTTGCTTGGGTTGGACAATACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAAGACCTCCCAAGCCTTaGAGGCTTCAGGAACTGGCC +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRRPPKP*RLQELA
Trigger: GGCCAGTTCCTGAAGCCTTCAAGGCTTGGGAGGTCT...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAGGAGGAACTGAGGTTTaGCTATTGGGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQGGTEV*LLGPLA
Trigger: GGCCAGGGGCCCCAATAGTCAAACCTCAGTTCCTCC...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGACGCAAGAGAATCGCTTaGACCCAGGAGGCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRRKRIA*TQEAQV
Trigger: AACCTGCGCCTCCTGGGTTCAAGCGATTCTCTTGCG...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAACGTTATCCCCAATGGTaGGCCCTCCCCCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQRYPQW*ALPLTA
Trigger: TGCAGTGAGGGGGAGGGCTCACCATTGGGGATAACG...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCTTGAAGACTTCTATTTaGAGCTTTCTCTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTLKTSI*SFLLPA
Trigger: GGCTGGCAAGAGAAAGCTTCAAATAGAAGTCTTCAA...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCAAATTGGAGGAATTATaGGTGACCTGCTCACCAACT +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVKLEEL*VTCSPT
Trigger: AGTTGGTGAGCAGGTCACTCATAATTCCTCCAATTT...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCTGCAGGGTACACCGATaGCTATTGTTACTAGTTAAC +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVCRVHR*LLLLVN
Trigger: GTTAACTAGTAACAATAGTCATCGGTGTACCCTGCA...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCAGGGCCTCCACCGCTaGTCCCGGTACCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPQGLHR*SRYRWH
Trigger: ATGCCAACGGTACCGGGAGCAGCGGTGGAGGCCCTG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGCAGTGCTGGAACCTGTaGTGTGCAGAAGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRQCWNL*CAEERT
Trigger: TGTCCTCTCTTCTGCACAGCACAGGTTCCAGCACTG...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTATGAGATCTATTTACTaGTCCCATCTTCCACACAGA +
Preference number: 4 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIMRSIY*SHLPHR
Trigger: TCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCAT...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGTTAGGGCTGACCTGGTaGTCACAGGTAGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRLGLTW*SQVANE
Trigger: CTCATTGGCTACCTGTGAGCACCAGGTCAGCCCTAA...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGACTGCTGAGAGTAGTGTaGGTCTGGGCAATGCCATGG +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRLLRVV*VWAMPW
Trigger: CCATGGCATTGCCCAGACTCACACTACTCTCAGCAG...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCTCATAAAAGGGAGGTaGGAGAAAACACACCATCCC +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSLIKGR*EKTHHP
Trigger: GGGATGGTGTGTTTTCTCTCACCTCCCTTTTATGAG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATAGGACCCAAATTGTCTaGAGGCTCCTATCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDRTQIV*RLLSGL
Trigger: AAGGCCTGATAGGAGCCTTCAGACAATTTGGGTCCT...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTTCCCTACATCAGCCGTaGGCTGAGGAGGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSSLHQP*AEEELR
Trigger: CCTCAGTTCCTCCTCAGCTCACGGCTGATGTAGGGA...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCATTAGACTAGACACCTaGGTTGTTTTCCCTACATCA +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVIRLDT*VVFPTS
Trigger: TGATGTAGGGAAAACAACTCAGGTGTCTAGTCTAAT...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCCAGTCAGGATTTGACTaGGAATTCATGTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTQSGFD*EFMLVS
Trigger: AGATACCAACATGAATTCTCAGTCAAATCCTGACTG...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGTCCCCCTCACTGCAATaGGCATTAAACCCAACTTGC +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRSPSLQ*ALNPTC
Trigger: GCAAGTTGGGTTTAATGCTCATTGCAGTGAGGGGGA...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCTCACAGGTAGCCAATaGGTTCTCTTGGACACAAAC +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSLTGSQ*VLLDTN
Trigger: GTTTGTGTCCAAGAGAACTCATTGGCTACCTGTGAG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAAAGGCCAAGGCCAGCTaGTACTTTCTGCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQKAKAS*YFLPQP
Trigger: CGGCTGAGGCAGAAAGTAGCAGCTGGCCTTGGCCTT...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATGAAAGTAGTGGGCCCTaGCCTATGGATTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDESSGP*PMDFQV
Trigger: GACCTGAAAATCCATAGGGCAGGGCCCACTACTTTC...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAAGAAGTCTCTACAGATaGCATCTGAGCTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRRSLYR*HLSWPR
Trigger: GCGGGGCCAGCTCAGATGCCATCTGTAGAGACTTCT...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGACCTCGCCGGCGTTTTaGGCCTGGCTCATGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKTSPAF*AWLMVL
Trigger: GAGGACCATGAGCCAGGCCCAAAACGCCGGCGAGGT...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCTCTTTGGAGATAACCTaGCAAGGAGGAAATAAAGTC +
Preference number: 4 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVSLEIT*QGGNKV
Trigger: GACTTTATTTCCTCCTTGCCAGGTTATCTCCAAAGA...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTGCTACCCAATTATCCTaGATTCCCTTAACAGCACCC +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSATQLS*IPLTAP
Trigger: GGGTGCTGTTAAGGGAATCCAGGATAATTGGGTAGC...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAACTCTTGGTGACCACTaGGGTAGCTCAGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRTLGDH*GSSGEV
Trigger: GACTTCACCTGAGCTACCTCAGTGGTCACCAAGAGT...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGAGTCATGGCAGAAGATaGACTCGTTTTTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRSHGRR*TRFCSP
Trigger: GGGTGAGCAAAAACGAGTTCATCTTCTGCCATGACT...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGATGGCCAGCAGGTTGCTaGCCTGCTTCTTTAACTCCT +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRWPAGC*PASLTP
Trigger: AGGAGTTAAAGAAGCAGGTCAGCAACCTGCTGGCCA...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAATGGAGCTCAGGGTTATaGCCTTGGCCTGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQWSSGL*PWPDCG
Trigger: TCCGCAATCAGGCCAAGGTCATAACCCTGAGCTCCA...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGAGTGTGGCATGGCCGTaGTGCGCATGCTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKSVAWP*CACSGK
Trigger: CTTCCCAGAGCATGCGCATCACGGCCATGCCACACT...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGATGGAGTGAGACTGCCTaGATAGATTCCTGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRWSETA*IDSWPH
Trigger: ATGGGGCCAGGAATCTATTCAGGCAGTCTCACTCCA...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGTGGGTCCCCGCCCACTaGCAATTCTGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLWVPAH*QFCCPG
Trigger: ACCTGGGCAGCAGAATTGTCAGTGGGCGGGGACCCA...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAGGGGAATGGAGAGGGTaGCCTATGGAGGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRGEWRG*PMEVLF
Trigger: GAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCC...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGGTGGGGGCCAGAGTCTaGTCAGTCGCTGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLVGARV*SVAGAV
Trigger: CACTGCACCAGCGACTGAGCAGACTCTGGCCCCCAC...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTGTTAGAAGGAAGGTTTaGCATACAGTCAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSVRRKV*HTVRCR
Trigger: TCTGCACCTGACTGTATGGCAAACCTTCCTTCTAAC...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGGTCTGGGCAATGCCATaGTTAAAAGTGGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRVWAMP*LKVATV
Trigger: CACTGTTGCCACTTTTAACCATGGCATTGCCCAGAC...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAATTAGCCCCATCAGTGTaGCATGGCCGTGATGCGCAT +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQLAPSV*HGRDAH
Trigger: ATGCGCATCACGGCCATGCCACACTGATGGGGCTAA...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCAGCTGACAGTGGCGTaGTCTCTGGGGTCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPQLTVA*SLGSSV
Trigger: CACACTTGACCCCAGAGATCACGCCACTGTCAGCTG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAGATATCGGCAACGCTTaGCTCGCTTGCACACATTCC +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQDIGNA*LACTHS
Trigger: GGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATC...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAATCAGTCCTTCCTCTCTaGTGGCTTCAGTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQSVLPL*WLQSAL
Trigger: GAGTGCAGACTGAAGCCAGCAGAGAGGAAGGACTGA...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCAGAGATCGTGCCACTaGACTGAAGCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPQRSCH*TEAWAT
Trigger: TGTGGCCCAGGCTTCAGTGCAGTGGCACGATCTCTG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTATGGGAGTGGTGGTGTaGCTCATTGTGATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSMGVVV*LIVIPA
Trigger: GGCAGGAATCACAATGAGCCACACCACCACTCCCAT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCAAAAAGAAAATTAGCTaGGCACCTATAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSKKKIS*APIVPA
Trigger: AGCTGGGACTATAGGTGCCCAGCTAATTTTCTTTTT...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTCTTACCAAAGCTATGTaGGGCTGGGGTCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSLTKAM*GWGLYP
Trigger: GGGATAAAGACCCCAGCCTCACATAGCTTTGGTAAG...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAAAGTGTCTTACAGGATaGGGCCTACAGGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQKCLTG*GLQEER
Trigger: TCTCTCCTCCTGTAGGCCTCATCCTGTAAGACACTT...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGATGCCTAGAACATAGCAGGCTTTTCACATTTGCCTaGGTTAGAAGGAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: QGSTTLMELLERCLEHSRLFTFA*VRRKVC
Trigger: GCAAACCTTCCTTCTAACTCAGGCAAATGTGAAAAG...CCTGCTATGTTCTAGGCATCTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAGGAGGGACATTAACTaGCATCAACTGAGCGGCAAC +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSRRDIN*HQLSGN
Trigger: GTTGCCGCTCAGTTGATGGCAGTTAATGTCCCTCCT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCAAAACAAGGTCAGTGTaGAAACCACAAAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSKTRSV*KPQNSK
Trigger: TTTGCTGTTTTGTGGTTTGCACACTGACCTTGTTTT...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGCTTCCCAATCTTTCCTaGCTTTCCCTCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKLPNLS*LSLWAG
Trigger: CCCTGCCCAGAGGGAAAGCCAGGAAAGATTGGGAAG...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGGAGCTGAGGAGGAACTaGGGTTTGACTATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLELRRN*GLTIGA
Trigger: GGCCCCAATAGTCAAACCTCAGTTCCTCCTCAGCTC...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAATCCCAGATGTGACCTaGGTGATCAACCAGACAAGA +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQIPDVT*VINQTR
Trigger: TCTTGTCTGGTTGATCACTCAGGTCACATCTGGGAT...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATAAGTCAGTCAGGATTTaGCTGAGAATTCATGTTGGT +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDKSVRI*LRIHVG
Trigger: ACCAACATGAATTCTCAGTCAAATCCTGACTGACTT...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAACGCTTGCCTCGCTTaGACACATTCCTCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSNACLA*THSSRS
Trigger: ACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCTGGAACCTGTGCTGTaGAGAAGAGAGGACAAGACG +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPLEPVL*RREDKT
Trigger: CGTCTTGTCCTCTCTTCTGCACAGCACAGGTTCCAG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCGCCCCATTCCTTACTTaGAGAACCCTGGGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPAPFLT*RTLGRL
Trigger: TAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGGC...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAGACAACAGGAAGGGATaGCCATTTGTTAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRDNRKG*PFVRGS
Trigger: ACTTCCTCTAACAAATGGGCATCCCTTCCTGTTGTC...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAGATGAAACGGCAATTTaGGCGGCTACACTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQDETAI*AATLLV
Trigger: AACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATC...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGCCCCAAAGCCCCATTTaGTCTTGTTCTGGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKPQSPI*SCSGSL
Trigger: TAGGGACCCAGAACAAGACCAAATGGGGCTTTGGGG...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATTTGGTGGTCTTCAGCTaGAGTAAATACATACAAGAC +
Preference number: 4 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDLVVFS*SKYIQD
Trigger: GTCTTGTATGTATTTACTCCAGCTGAAGACCACCAA...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCCCAGTTACTCTACTTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPPSYST*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAAGTAGAGTAACTGGG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAACTACACTCCTTGTTCTaGAAGTCATGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQLHSLF*KSWQKM
Trigger: CATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAG...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCTCCACCCCTCGCGGTaGAGCCAAACTATATTCATA +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPLHPSR*SQTIFI
Trigger: TATGAATATAGTTTGGCTCCACCGCGAGGGGTGGAG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTGGAGAGGGTGACCTATaGAGGTTCTTTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSGEGDL*RFFSKL
Trigger: AAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCC...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTTCTAGGACACTAAAATaGGGGATCAAGAGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSSRTLK*GIKSKG
Trigger: TCCCTTACTCTTGATCCCTCATTTTAGTGTCCTAGA...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCATGTTGCATGTAAAGTaGCTAGCACAGAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPMLHVK*LAQSLG
Trigger: GCCAAGGCTCTGTGCTAGGCACTTTACATGCAACAT...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTCAGGTGTATTCTTGGTaGTCTTCAGCTGGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSQVYSW*SSAGVN
Trigger: ATTTACTCCAGCTGAAGACCACCAAGAATACACCTG...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAAGGGCAACAAGATTTaGGGAAACTCCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSKGNKI*GNSFCI
Trigger: AATACAGAAGGAGTTTCCTCAAATCTTGTTGCCCTT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAACCTCTCTATAAACTaGAATTTGCCAAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSNLSIN*NLPSTG
Trigger: TCCAGTGCTTGGCAAATTTCAGTTTATAGAGAGGTT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGGGGCTAGCAGTATCTTaGCTGCTTCATTCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLGLAVS*LLHSVC
Trigger: GCAAACTGAATGAAGCAGTCAAGATACTGCTAGCCC...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CAA 72 bp CTTCCTTTTCTCTACTTCCCTAGGGCTAGCAGTATCTaGACTGCTTCATTCAGTTTGCAGAACTATTTAAGA +
Preference number: 4 (lower is better)
Translates to: LPFLYFPRASSI*TASFSLQNYLR
Trigger: TCTTAAATAGTTCTGCAAACTGAATGAAGCAGTCAAGATACTGCTAGCCCTAGGGAAGTAGAGAAAAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAAATGCTACGATTAACTaGCCCGTAATTTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQNATIN*PVIFLL
Trigger: TAAGAGGAAAATTACGGGTCAGTTAATCGTAGCATT...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAACACTGGTTTGTCAATaGCCCTCTTTAAAAATTACA +
Preference number: 4 (lower is better)
Translates to: VANEFSWTQTISQNTSIRTLVCQ*PSLKIT
Trigger: TGTAATTTTTAAAGAGGGCCATTGACAAACCAGTGT...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR GCA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGTGTAAATCTGTCAGATaGAGCAGAAGAACTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLCKSVR*SRRTGV
Trigger: AACCCCAGTTCTTCTGCTGCATCTGACAGATTTACA...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGGTTCTTTTATTTCTTTaGAAAGTAGTGGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLVLLFL*KVVGPA
Trigger: GGCAGGGCCCACTACTTTCCAAAGAAATAAAAGAAC...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
3UTR CAA 72 bp ATAACCTGGCAAGGAGGAAATAAAGTCAGTCAGGATTaGACTGAGAATTCATGTTGGTATCTATGGTTACAT +
Preference number: 4 (lower is better)
Translates to: ITWQGGNKVSQD*TENSCWYLWLH
Trigger: ATGTAACCATAGATACCAACATGAATTCTCAGTCAAATCCTGACTGACTTTATTTCCTCCTTGCCAGGTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR TCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCCAAACTATATTCATATaGCTCAAAATGAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPQTIFI*LKMRAI
Trigger: GATGGCCCTCATTTTGAGTCATATGAATATAGTTTG...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CCA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCACTACAGAAGGAACATaGATGAACCTTAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPTTEGT*MNLREK
Trigger: TTTCTCTCTAAGGTTCATCCATGTTCCTTCTGTAGT...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 90 bp AGGTTCCGTGCAGTGCCGCCGGCGCTCAGCCGTGGGCTACGTGAATaGGACACTAAGGGCGCGCGAAGTGAAGCGGGGAGCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RFRAVPPALSRGLRE*DTKGARSEAGSWSS
Trigger: GGAGCTCCAGCTCCCCGCTTCACTTCGCGCGCCCTTAGTGTCCCATTCACGTAGCCCACGGCTGAGCGCCGGCGGCACTGCACGGAACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS CCA 90 bp GTTGGGGGAGCAGCTGGAGCTCCAGCAGGGGCCACCAGTTCTTGCTaGGACACTGGACGAGGCTGTAGAGCCTGGCTGCTGAGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: VGGAAGAPAGATSSC*DTGRGCRAWLLRVV
Trigger: CACTACTCTCAGCAGCCAGGCTCTACAGCCTCGTCCAGTGTCCCAGCAAGAACTGGTGGCCCCTGCTGGAGCTCCAGCTGCTCCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 90 bp GCTGGAGCTCCAGGTGTCATCAAGCTGAGGGGATGGGCAGGGTTGTaGCGTCACGAAGCTGGCGTTTGCTCGCGATGCGGGGTCACTCAG +
Preference number: 5 (lower is better)
Translates to: AGAPGVIKLRGWAGL*RHEAGVCSRCGVTQ
Trigger: CTGAGTGACCCCGCATCGCGAGCAAACGCCAGCTTCGTGACGTCACAACCCTGCCCATCCCCTCAGCTTGATGACACCTGGAGCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS GCA 90 bp GGCAACAGTGCCCACAGTGGGGGCCAGAGTCTGCTCAGTCGCTGGTaGAGTGGAGCTCAGGGTTATGACCTTGGCCTGATTGCGGAACTG +
Preference number: 5 (lower is better)
Translates to: GNSAHSGGQSLLSRW*SGAQGYDLGLIAEL
Trigger: CAGTTCCGCAATCAGGCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACTCTGGCCCCCACTGTGGGCACTGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp TTAGTTGGGGGAGCAGCTGGAGCTCCAGCAGGGGCCACCAGTTCTTaGTGGGACACTGGACGAGGCTGTAGAGCCTGGCTGCTGAGAGTA +
Preference number: 5 (lower is better)
Translates to: LVGGAAGAPAGATSS*WDTGRGCRAWLLRV
Trigger: TACTCTCAGCAGCCAGGCTCTACAGCCTCGTCCAGTGTCCCAGCAAGAACTGGTGGCCCCTGCTGGAGCTCCAGCTGCTCCCCCAACTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp GAGTTTTCCCGCAGCAAGTCTTCTAGCTTGGCAGGTTCCGTGCAGTaGCGCCGGCGCTCAGCCGTGGGCTACGTGAATGGGACACTAAGG +
Preference number: 5 (lower is better)
Translates to: EFSRSKSSSLAGSVQ*RRRSAVGYVNGTLR
Trigger: CCTTAGTGTCCCATTCACGTAGCCCACGGCTGAGCGCCGGCGGCACTGCACGGAACCTGCCAAGCTAGAAGACTTGCTGCGGGAAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS CCA 90 bp TGCGAAAGAAGTCCTAGGAGTTTTCCCGCAGCAAGTCTTCTAGCTTaGCAGGTTCCGTGCAGTGCCGCCGGCGCTCAGCCGTGGGCTACG +
Preference number: 5 (lower is better)
Translates to: CERSPRSFPAASLLA*QVPCSAAGAQPWAT
Trigger: CGTAGCCCACGGCTGAGCGCCGGCGGCACTGCACGGAACCTGCCAAGCTAGAAGACTTGCTGCGGGAAAACTCCTAGGACTTCTTTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS CCA 90 bp AGTGGCAACAGTGCCCACAGTGGGGGCCAGAGTCTGCTCAGTCGCTaGTGCAGTGGAGCTCAGGGTTATGACCTTGGCCTGATTGCGGAA +
Preference number: 5 (lower is better)
Translates to: SGNSAHSGGQSLLSR*CSGAQGYDLGLIAE
Trigger: TTCCGCAATCAGGCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACTCTGGCCCCCACTGTGGGCACTGTTGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 90 bp GGAGCCATGGAGACAGGTGGAGGTGCCATTCCCTGGGCAATTGTTTaGGCCAGGGCAGCTGACAGTGGCGTGATCTCTGGGGTCAAGTGT +
Preference number: 5 (lower is better)
Translates to: GAMETGGGAIPWAIV*ARAADSGVISGVKC
Trigger: ACACTTGACCCCAGAGATCACGCCACTGTCAGCTGCCCTGGCTCAAACAATTGCCCAGGGAATGGCACCTCCACCTGTCTCCATGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp CCATGGTTAAAAGTGGCAACAGTGCCCACAGTGGGGGCCAGAGTCTaGTCAGTCGCTGGTGCAGTGGAGCTCAGGGTTATGACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PWLKVATVPTVGARV*SVAGAVELRVMTLA
Trigger: GGCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACTCTGGCCCCCACTGTGGGCACTGTTGCCACTTTTAACCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp AGGGTAAGTCACCATGGGAGTGGTGGTGTGGCTCATTGTGATTCCTaGCAAGGGTTGGGCCATCGATACAGCCACAGGGGCCACAGGAGC +
Preference number: 5 (lower is better)
Translates to: RVSHHGSGGVAHCDS*QGLGHRYSHRGHRS
Trigger: GCTCCTGTGGCCCCTGTGGCTGTATCGATGGCCCAACCCTTGGCAGGAATCACAATGAGCCACACCACCACTCCCATGGTGACTTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 90 bp CGCTGCTCCCGGTACCGTTGGCATAGCTGTCCCGGTCAGGCATCCTaGTCCCGCCCAACTCAGGGTTTTCTTTATCTTGCCACTCTTGGT +
Preference number: 5 (lower is better)
Translates to: RCSRYRWHSCPGQAS*SRPTQGFLYLATLG
Trigger: ACCAAGAGTGGCAAGATAAAGAAAACCCTGAGTTGGGCGGGACCAGGATGCCTGACCGGGACAGCTATGCCAACGGTACCGGGAGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000551880.1
ENST00000552345.1
CDS-3UTR CAA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCAGGGGCCACCAGTTCTaGCTGGGACACTGGACGAGG +
Preference number: 5 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTRGHQF*LGHWTR
Trigger: CCTCGTCCAGTGTCCCAGCAAGAACTGGTGGCCCCT...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 90 bp TGGGACACTGGACGAGGCTGTAGAGCCTGGCTGCTGAGAGTAGTGTaGGTCTGGGCAATGCCATGGTTAAAAGTGGCAACAGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: WDTGRGCRAWLLRVV*VWAMPWLKVATVPT
Trigger: TGTGGGCACTGTTGCCACTTTTAACCATGGCATTGCCCAGACTCACACTACTCTCAGCAGCCAGGCTCTACAGCCTCGTCCAGTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp CCTCGCTCATGTCTGGGTGGCGATATCGGCAACGCTTGCCTCGCTTaGACACATTCCTCAAGAAGTCTCTACAGATGGCATCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PRSCLGGDIGNACLA*THSSRSLYRWHLSW
Trigger: CCAGCTCAGATGCCATCTGTAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CCA 90 bp TCGTTTTTGCTCACCCCCAAGTTGGACACCTCGCTCATGTCTGGGTaGCGATATCGGCAACGCTTGCCTCGCTTGCACACATTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SFLLTPKLDTSLMSG*RYRQRLPRLHTFLK
Trigger: CTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAAAAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CCA 90 bp GAACTCGTTTTTGCTCACCCCCAAGTTGGACACCTCGCTCATGTCTaGGTGGCGATATCGGCAACGCTTGCCTCGCTTGCACACATTCCT +
Preference number: 5 (lower is better)
Translates to: ELVFAHPQVGHLAHV*VAISATLASLAHIP
Trigger: AGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAAAAACGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS-3UTR CAA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTGGAGGACTGAGCCTGTaGAGCCCCCACCAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSGGLSL*SPHQCL
Trigger: GAGGCACTGGTGGGGGCTCAACAGGCTCAGTCCTCC...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTTCCCCAAAGCCCCATTaGGTCTTGTTCTGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCISPKPH*VLFWVP
Trigger: AGGGACCCAGAACAAGACCAAATGGGGCTTTGGGGA...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCCAGACCTCCCAAGCCTaGAAGGCTTCAGGAACTGGC +
Preference number: 5 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVQTSQA*KASGTG
Trigger: GCCAGTTCCTGAAGCCTTCAAGGCTTGGGAGGTCTG...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 90 bp GGGCCAGAGTCTGCTCAGTCGCTGGTGCAGTGGAGCTCAGGGTTATaGCCTTGGCCTGATTGCGGAACTGAGCATTTTGTTCCAGTAGTA +
Preference number: 5 (lower is better)
Translates to: GPESAQSLVQWSSGL*PWPDCGTEHFVPVV
Trigger: TACTACTGGAACAAAATGCTCAGTTCCGCAATCAGGCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCCCATCCTCATCCTCCTaGGAGCCATGGATGAAACGG +
Preference number: 5 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTPSSSS*EPWMKR
Trigger: CCGTTTCATCCATGGCTCCAAGGAGGATGAGGATGG...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp AGTTGGACACCTCGCTCATGTCTGGGTGGCGATATCGGCAACGCTTaGCTCGCTTGCACACATTCCTCAAGAAGTCTCTACAGATGGCAT +
Preference number: 5 (lower is better)
Translates to: SWTPRSCLGGDIGNA*LACTHSSRSLYRWH
Trigger: ATGCCATCTGTAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS-3UTR CAA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCAACGCTTGCCTCGCTaGCACACATTCCTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHQRLPR*HTFLKK
Trigger: CTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTG...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTGGGCGGCTACACTCCTaGTTCTGGAAGTCATGGCAG +
Preference number: 5 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSGRLHS*FWKSWQ
Trigger: CTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCC...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 90 bp GAGCCATGGATGAAACGGCAATTTGGGCGGCTACACTCCTTGTTCTaGAAGTCATGGCAGAAGATGAACTCGTTTTTGCTCACCCCCAAG +
Preference number: 5 (lower is better)
Translates to: EPWMKRQFGRLHSLF*KSWQKMNSFLLTPK
Trigger: CTTGGGGGTGAGCAAAAACGAGTTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATCCATGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 90 bp CTAGTGAGGAACCTCAAAAAGGCAGCGTCTGACAGTGCATTGGGATaGCCGATTAGACTTGAAGGCAGTGATTGTGACGCTTCCCAACAC +
Preference number: 5 (lower is better)
Translates to: LVRNLKKAASDSALG*PIRLEGSDCDASQH
Trigger: GTGTTGGGAAGCGTCACAATCACTGCCTTCAAGTCTAATCGGCCATCCCAATGCACTGTCAGACGCTGCCTTTTTGAGGTTCCTCACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551880.1
CDS-3UTR CAA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTCCTCCTCCTTGCCATTaGGTAGGTCAGCCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSPPPCH*VGQPVK
Trigger: TTTCACCGGCTGACCTACCAAATGGCAAGGAGGAGG...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTCACCTCGCCGGCGTTTaGGGCCTGGCTCATGGTCCT +
Preference number: 5 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSHLAGV*GLAHGP
Trigger: AGGACCATGAGCCAGGCCCAAAACGCCGGCGAGGTG...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GAGAATGGGGGAATGGAGAGGGTGACCTATGGAGGTTCTTTTCCAAACTTCTCCAAGCCCCATTTGGTCTaGTTCTGGGTCCCTACCCTT +
Preference number: 5 (lower is better)
Translates to: ENGGMERVTYGGSFPNFSKPHLV*FWVPTL
Trigger: AAGGGTAGGGACCCAGAACAAGACCAAATGGGGCTT...GGAGAAGTTTGGAAAAGAACCTCCATAGGTCACCCTCTCCATTCCCCCATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATACGCAAGAGAATCGCTaGAACCCAGGAGGCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDTQENR*NPGGAG
Trigger: ACCTGCGCCTCCTGGGTTCAAGCGATTCTCTTGCGT...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCCCCAAATCTACCTCTTaGGAGATAACCTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTPKSTS*EITWQG
Trigger: TCCTTGCCAGGTTATCTCCAAAGAGGTAGATTTGGG...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTAGGGCTAGCAGTATCTaGACTGCTTCATTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIRASSI*TASFSL
Trigger: CAAACTGAATGAAGCAGTCAAGATACTGCTAGCCCT...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 90 bp AATTTGGGCGGCTACACTCCTTGTTCTGGAAGTCATGGCAGAAGATaGACTCGTTTTTGCTCACCCCCAAGTTGGACACCTCGCTCATGT +
Preference number: 5 (lower is better)
Translates to: NLGGYTPCSGSHGRR*TRFCSPPSWTPRSC
Trigger: ACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAAAAACGAGTTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 90 bp CTCCTGTCTTCTTATAGCCATCCTCATCCTCCTTGGAGCCATGGATaGAACGGCAATTTGGGCGGCTACACTCCTTGTTCTGGAAGTCAT +
Preference number: 5 (lower is better)
Translates to: LLSSYSHPHPPWSHG*NGNLGGYTPCSGSH
Trigger: ATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATCCATGGCTCCAAGGAGGATGAGGATGGCTATAAGAAGACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp GACCAGGTGAAGTACAAATGCCATCTATCCAAGCCTGGCTCACGTTaGAAGTCGCACCAGCAGCAGATAATTAGTTATGATGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: DQVKYKCHLSKPGSR*KSHQQQIISYDAPP
Trigger: GGGAGGAGCATCATAACTAATTATCTGCTGCTGGTGCGACTTGCAACGTGAGCCAGGCTTGGATAGATGGCATTTGTACTTCACCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549973.1
CDS CCA 90 bp ATAGCCATCCTCATCCTCCTTGGAGCCATGGATGAAACGGCAATTTaGGCGGCTACACTCCTTGTTCTGGAAGTCATGGCAGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: IAILILLGAMDETAI*AATLLVLEVMAEDE
Trigger: TTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATCCATGGCTCCAAGGAGGATGAGGATGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATATAGGGACCTCCTCCTaGCCATTTGGTAGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDIGTSS*PFGRSA
Trigger: GGCTGACCTACCAAATGGCAAGGAGGAGGTCCCTAT...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTAAAGTCAGTCAGGATTaGACTGAGAATTCATGTTGG +
Preference number: 5 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIKVSQD*TENSCW
Trigger: CCAACATGAATTCTCAGTCAAATCCTGACTGACTTT...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTGTCCAACCTGTGTCAATGAGATGTaGCATGTAAAGTGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: HYGPSFPRAQKQFLYCPTCVNEM*HVKCLA
Trigger: TGCTAGGCACTTTACATGCAACATCTCATTGACACA...GGTTGGACAATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GGCTGGAGCACTATGGTCCCAGCTTTCCCAGGGCCCAGAAGCAATTCCTGTATTCAAGTAGTGATCGCTTaGTTGGATGGCTATATCATT +
Preference number: 5 (lower is better)
Translates to: GWSTMVPAFPGPRSNSCIQVVIA*LDGYII
Trigger: AATGATATAGCCATCCAACAAAGCGATCACTACTTG...AATACAGGAATTGCTTCTGGGCCCTGGGAAAGCTGGGACCATAGTGCTCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAAAGGCAGGAGAATCACTaGAACCCGAGAGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQRQENH*NPRGGG
Trigger: GCCTCCGCCTCTCGGGTTCAAGTGATTCTCCTGCCT...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGACGATATCGGCAACGCTaGCCTCGCTTGCACACATTC +
Preference number: 5 (lower is better)
Translates to: VANEFSWTQTISQNTSIRRYRQR*PRLHTF
Trigger: GAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCG...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTGATTCCTGCCAAGGGTaGGGCCATCGATACAGCCAC +
Preference number: 5 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSDSCQG*GHRYSH
Trigger: GTGGCTGTATCGATGGCCCAACCCTTGGCAGGAATC...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACCTGTCAGCATTAAACCCAACTaGCTCAATTACCAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: PSTERQLPSTQWPSTPPVSIKPN*LNYQVY
Trigger: ATACACCTGGTAATTGAGCAAGTTGGGTTTAATGCT...GACAGGTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 90 bp AGATACAAACTTTTAGTAAAGGGGAATGACCAGGTGAAGTACAAATaGCATCTATCCAAGCCTGGCTCACGTTGCAAGTCGCACCAGCAG +
Preference number: 5 (lower is better)
Translates to: RYKLLVKGNDQVKYK*HLSKPGSRCKSHQQ
Trigger: CTGCTGGTGCGACTTGCAACGTGAGCCAGGCTTGGATAGATGGCATTTGTACTTCACCTGGTCATTCCCCTTTACTAAAAGTTTGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549973.1
CDS-3UTR CAA 90 bp CCATCAACTCAATGGCCATCAACTCCACCTGTCCTGCTCTGTTTGAATAAGGATCAACTAGGACCCAAATaGTCTGAAGGCTCCTATCAG +
Preference number: 5 (lower is better)
Translates to: PSTQWPSTPPVLLCLNKDQLGPK*SEGSYQ
Trigger: CTGATAGGAGCCTTCAGACAATTTGGGTCCTAGTTG...ATCCTTATTCAAACAGAGCAGGACAGGTGGAGTTGATGGCCATTGAGTTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 90 bp AAAAACAGAGACTTGGGTGGAAGAAGGAGTAAGAGTGGAGGACTATaGGGTGGTTGTCACAAGAAATCTGACAAAACGGCAAAGCTTCGA +
Preference number: 5 (lower is better)
Translates to: KNRDLGGRRSKSGGL*GGCHKKSDKTAKLR
Trigger: TCGAAGCTTTGCCGTTTTGTCAGATTTCTTGTGACAACCACCCCATAGTCCTCCACTCTTACTCCTTCTTCCACCCAAGTCTCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000551880.1
ENST00000552345.1
CDS-3UTR CAA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGTACAGTGAACCGAGATaGCGCCACTGCACTCCGGTC +
Preference number: 5 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKYSEPR*RHCTPV
Trigger: GACCGGAGTGCAGTGGCGCAATCTCGGTTCACTGTA...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp AACTGCCATCAACTGAGCGGCAACTGCCATCAACTCAATGGCCATCAACTCCACGTAAACTTCCTGGACTaGCAATCTGCATTTATATGT +
Preference number: 5 (lower is better)
Translates to: NCHQLSGNCHQLNGHQLHVNFLD*QSAFIC
Trigger: ACATATAAATGCAGATTGCAAGTCCAGGAAGTTTAC...GTGGAGTTGATGGCCATTGAGTTGATGGCAGTTGCCGCTCAGTTGATGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCTTGCTCACCCCCAAGTaGGACACCTCGCTCATGTCT +
Preference number: 5 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPLLTPK*DTSLMS
Trigger: AGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAA...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTACTGGAAGTCCCAGTTaGTTCTCATGTGAATTATTG +
Preference number: 5 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSTGSPS*FSCELL
Trigger: CAATAATTCACATGAGAACAAACTGGGACTTCCAGT...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGGGCCCCATTCCTTACTaGCAGAACCCTGGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLGPIPY*QNPGQV
Trigger: AACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGGCC...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp CCCCATTCCTTACTTGCAGAACCCTGGGCAGGTTACTTTTTAAGCCTGCTTTCTGTAGTGATCGCTTTGTaGGATGGCTATATCATTAGA +
Preference number: 5 (lower is better)
Translates to: PHSLLAEPWAGYFLSLLSVVIAL*DGYIIR
Trigger: TCTAATGATATAGCCATCCAACAAAGCGATCACTAC...AGAAAGCAGGCTTAAAAAGTAACCTGCCCAGGGTTCTGCAAGTAAGGAATGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGAGGAAGGGATGCCCATTaGTTAGAGGAAGTGTCTTAC +
Preference number: 5 (lower is better)
Translates to: VANEFSWTQTISQNTSIRGRDAH*LEEVSY
Trigger: GTAAGACACTTCCTCTAACAAATGGGCATCCCTTCC...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGTTGGTGGCCAGCAGGTaGCTGACCTGCTTCTTTAAC +
Preference number: 5 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKLVASR*LTCFFN
Trigger: GTTAAAGAAGCAGGTCAGCAACCTGCTGGCCACCAA...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TTTGGCATGAGATCTATTTACTGCTCCCATCTTCCACACAGAATAGCTAAGCAACCTGTCCTGCTCTGTTaGAATAAGGATCTGTCAACT +
Preference number: 5 (lower is better)
Translates to: FGMRSIYCSHLPHRIAKQPVLLC*NKDLST
Trigger: AGTTGACAGATCCTTATTCAAACAGAGCAGGACAGG...TTGCTTAGCTATTCTGTGTGGAAGATGGGAGCAGTAAATAGATCTCATGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GTGGTCTTCAGCTGGAGTAAATACATACAAGACATACAATGTCTAAAATTTCCCTTTATCTTGCCACTCTaGGTGACCACTGAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: VVFSWSKYIQDIQCLKFPFILPL*VTTEVA
Trigger: AGCTACCTCAGTGGTCACCAAGAGTGGCAAGATAAA...GGGAAATTTTAGACATTGTATGTCTTGTATGTATTTACTCCAGCTGAAGACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGAAACTCAAAATCCCGTaGCAGGTGACGGAACTTGCA +
Preference number: 5 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKKLKIP*QVTELA
Trigger: TGCAAGTTCCGTCACCTGCAACGGGATTTTGAGTTT...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp GTAGCCAATGAGTTCTCTTGGACACAAACAATCTCACAAAACACCAGCATCAGATTTGAAGACTTCTATTaGAAGCTTTCTCTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: VANEFSWTQTISQNTSIRFEDFY*KLSLAS
Trigger: GCTGGCAAGAGAAAGCTTCAAATAGAAGTCTTCAAA...TCTGATGCTGGTGTTTTGTGAGATTGTTTGTGTCCAAGAGAACTCATTGGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTGAAGGGCAACAAGATTaGAGGAAACTCCTTCTGTAT +
Preference number: 5 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSEGQQD*RKLLLY
Trigger: ATACAGAAGGAGTTTCCTCAAATCTTGTTGCCCTTC...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TGTATTTGTAATCTATTACCAAGGTTCTACTACCCTTATGGAGCTCCTAGAAAGAGGGTTTTCTTTATCTaGCCACTCTTGGTGACCACT +
Preference number: 5 (lower is better)
Translates to: CICNLLPRFYYPYGAPRKRVFFI*PLLVTT
Trigger: AGTGGTCACCAAGAGTGGCAAGATAAAGAAAACCCT...CTTTCTAGGAGCTCCATAAGGGTAGTAGAACCTTGGTAATAGATTACAAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp ACAAGACATACAATGTCTAAAATTTCCCAAATCTACCTCTTTGGAGATAACCTGGCAGAAGAACTGGGGTaGATCACTGGGAAGAAACTA +
Preference number: 5 (lower is better)
Translates to: TRHTMSKISQIYLFGDNLAEELG*ITGKKL
Trigger: TAGTTTCTTCCCAGTGATCAACCCCAGTTCTTCTGC...CAGGTTATCTCCAAAGAGGTAGATTTGGGAAATTTTAGACATTGTATGTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS-3UTR CAA 90 bp TGTAGGTTTAGGAAGGAAAAAGTGCAGGGTACACCGATGACTATTGTTACTAGTAATTCCTTTTCACATTaGCCTGAGTTAGAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CRFRKEKVQGTPMTIVTSNSFSH*PELEGR
Trigger: CCTTCCTTCTAACTCAGGCAAATGTGAAAAGGAATT...ACTAGTAACAATAGTCATCGGTGTACCCTGCACTTTTTCCTTCCTAAACCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 72 bp CACCTCCAGGGCCTCCACCGCTGCTCCCGGTACCGTTaGCATAGCTGTCCCGGTCAGGCATCCTGGTCCCGC +
Preference number: 6 (lower is better)
Translates to: HLQGLHRCSRYR*HSCPGQASWSR
Trigger: GCGGGACCAGGATGCCTGACCGGGACAGCTATGCCAACGGTACCGGGAGCAGCGGTGGAGGCCCTGGAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000551880.1
ENST00000552345.1
CDS CCA 72 bp GCAGTGCCGCCGGCGCTCAGCCGTGGGCTACGTGAATaGGACACTAAGGGCGCGCGAAGTGAAGCGGGGAGC +
Preference number: 6 (lower is better)
Translates to: AVPPALSRGLRE*DTKGARSEAGS
Trigger: GCTCCCCGCTTCACTTCGCGCGCCCTTAGTGTCCCATTCACGTAGCCCACGGCTGAGCGCCGGCGGCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS TCA 72 bp CCAGGTGTCATCAAGCTGAGGGGATGGGCAGGGTTGTaGCGTCACGAAGCTGGCGTTTGCTCGCGATGCGGG +
Preference number: 6 (lower is better)
Translates to: PGVIKLRGWAGL*RHEAGVCSRCG
Trigger: CCCGCATCGCGAGCAAACGCCAGCTTCGTGACGTCACAACCCTGCCCATCCCCTCAGCTTGATGACACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS CCA 72 bp AGTGCCCACAGTGGGGGCCAGAGTCTGCTCAGTCGCTaGTGCAGTGGAGCTCAGGGTTATGACCTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: SAHSGGQSLLSR*CSGAQGYDLGL
Trigger: CAGGCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACTCTGGCCCCCACTGTGGGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 72 bp AGTCCTAGGAGTTTTCCCGCAGCAAGTCTTCTAGCTTaGCAGGTTCCGTGCAGTGCCGCCGGCGCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: SPRSFPAASLLA*QVPCSAAGAQP
Trigger: CGGCTGAGCGCCGGCGGCACTGCACGGAACCTGCCAAGCTAGAAGACTTGCTGCGGGAAAACTCCTAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS GCA 72 bp GCCCACAGTGGGGGCCAGAGTCTGCTCAGTCGCTGGTaGAGTGGAGCTCAGGGTTATGACCTTGGCCTGATT +
Preference number: 6 (lower is better)
Translates to: AHSGGQSLLSRW*SGAQGYDLGLI
Trigger: AATCAGGCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACTCTGGCCCCCACTGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 72 bp GAGACAGGTGGAGGTGCCATTCCCTGGGCAATTGTTTaGGCCAGGGCAGCTGACAGTGGCGTGATCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ETGGGAIPWAIV*ARAADSGVISG
Trigger: CCCAGAGATCACGCCACTGTCAGCTGCCCTGGCTCAAACAATTGCCCAGGGAATGGCACCTCCACCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 72 bp CACCATGGGAGTGGTGGTGTGGCTCATTGTGATTCCTaGCAAGGGTTGGGCCATCGATACAGCCACAGGGGC +
Preference number: 6 (lower is better)
Translates to: HHGSGGVAHCDS*QGLGHRYSHRG
Trigger: GCCCCTGTGGCTGTATCGATGGCCCAACCCTTGGCAGGAATCACAATGAGCCACACCACCACTCCCATGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 72 bp CTCACCCCCAAGTTGGACACCTCGCTCATGTCTGGGTaGCGATATCGGCAACGCTTGCCTCGCTTGCACACA +
Preference number: 6 (lower is better)
Translates to: LTPKLDTSLMSG*RYRQRLPRLHT
Trigger: TGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGGGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CAA 72 bp AGTGGTGGTGTGGCTCATTGTGATTCCTGCCAAGGGTaGGGCCATCGATACAGCCACAGGGGCCACAGGAGC +
Preference number: 6 (lower is better)
Translates to: SGGVAHCDSCQG*GHRYSHRGHRS
Trigger: GCTCCTGTGGCCCCTGTGGCTGTATCGATGGCCCAACCCTTGGCAGGAATCACAATGAGCCACACCACCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 72 bp TCAGCCGGTGAAAGGCCAAGGCCAGCTGCTACTTTCTaGCTCAGCCGTGGGGGAAGCTCTCCTGTCTTCTTA +
Preference number: 6 (lower is better)
Translates to: SAGERPRPAATF*LSRGGSSPVFL
Trigger: TAAGAAGACAGGAGAGCTTCCCCCACGGCTGAGGCAGAAAGTAGCAGCTGGCCTTGGCCTTTCACCGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 72 bp CGGTACCGTTGGCATAGCTGTCCCGGTCAGGCATCCTaGTCCCGCCCAACTCAGGGTTTTCTTTATCTTGCC +
Preference number: 6 (lower is better)
Translates to: RYRWHSCPGQAS*SRPTQGFLYLA
Trigger: GGCAAGATAAAGAAAACCCTGAGTTGGGCGGGACCAGGATGCCTGACCGGGACAGCTATGCCAACGGTACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000551880.1
ENST00000552345.1
CDS CCA 72 bp CTCGCTTGCACACATTCCTCAAGAAGTCTCTACAGATaGCATCTGAGCTGGCCCCGCCACTGCCTACCCCTG +
Preference number: 6 (lower is better)
Translates to: LACTHSSRSLYR*HLSWPRHCLPL
Trigger: CAGGGGTAGGCAGTGGCGGGGCCAGCTCAGATGCCATCTGTAGAGACTTCTTGAGGAATGTGTGCAAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CCA 72 bp TTTGCTCACCCCCAAGTTGGACACCTCGCTCATGTCTaGGTGGCGATATCGGCAACGCTTGCCTCGCTTGCA +
Preference number: 6 (lower is better)
Translates to: FAHPQVGHLAHV*VAISATLASLA
Trigger: TGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CCA 72 bp GCTATACCAGGGGAGTGTCCATTAGCCCCATCAGTGTaGCATGGCCGTGATGCGCATGCTCTGGGAAGCGAT +
Preference number: 6 (lower is better)
Translates to: AIPGECPLAPSV*HGRDAHALGSD
Trigger: ATCGCTTCCCAGAGCATGCGCATCACGGCCATGCCACACTGATGGGGCTAATGGACACTCCCCTGGTATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CAA 72 bp CCCTTGAGAAAGTCACGGCAGATAGGGACCTCCTCCTaGCCATTTGGTAGGTCAGCCGGTGAAAGGCCAAGG +
Preference number: 6 (lower is better)
Translates to: PLRKSRQIGTSS*PFGRSAGERPR
Trigger: CCTTGGCCTTTCACCGGCTGACCTACCAAATGGCAAGGAGGAGGTCCCTATCTGCCGTGACTTTCTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 72 bp GGTAAGTCACCATGGGAGTGGTGGTGTGGCTCATTGTaGTTCCTGCCAAGGGTTGGGCCATCGATACAGCCA +
Preference number: 6 (lower is better)
Translates to: GKSPWEWWCGSL*FLPRVGPSIQP
Trigger: TGGCTGTATCGATGGCCCAACCCTTGGCAGGAATCACAATGAGCCACACCACCACTCCCATGGTGACTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 72 bp CCTCGCTCATGTCTGGGTGGCGATATCGGCAACGCTTaGCTCGCTTGCACACATTCCTCAAGAAGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: PRSCLGGDIGNA*LACTHSSRSLY
Trigger: GTAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CAA 90 bp ACCTCGCTCATGTCTGGGTGGCGATATCGGCAACGCTTGCCTCGCTaGCACACATTCCTCAAGAAGTCTCTACAGATGGCATCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: TSLMSGWRYRQRLPR*HTFLKKSLQMASEL
Trigger: CAGCTCAGATGCCATCTGTAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CAA 72 bp ACCTCGCTCATGTCTGGGTGGCGATATCGGCAACGCTaGCCTCGCTTGCACACATTCCTCAAGAAGTCTCTA +
Preference number: 6 (lower is better)
Translates to: TSLMSGWRYRQR*PRLHTFLKKSL
Trigger: TAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CAA 72 bp TGGCAGAAGATGAACTCGTTTTTGCTCACCCCCAAGTaGGACACCTCGCTCATGTCTGGGTGGCGATATCGG +
Preference number: 6 (lower is better)
Translates to: WQKMNSFLLTPK*DTSLMSGWRYR
Trigger: CCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAAAAACGAGTTCATCTTCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257940.7
ENST00000546903.1
CDS CAA 90 bp AAGTTGGACACCTCGCTCATGTCTGGGTGGCGATATCGGCAACGCTaGCCTCGCTTGCACACATTCCTCAAGAAGTCTCTACAGATGGCA +
Preference number: 6 (lower is better)
Translates to: KLDTSLMSGWRYRQR*PRLHTFLKKSLQMA
Trigger: TGCCATCTGTAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CAA 90 bp TGGAAGTCATGGCAGAAGATGAACTCGTTTTTGCTCACCCCCAAGTaGGACACCTCGCTCATGTCTGGGTGGCGATATCGGCAACGCTTG +
Preference number: 6 (lower is better)
Translates to: WKSWQKMNSFLLTPK*DTSLMSGWRYRQRL
Trigger: CAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAAAAACGAGTTCATCTTCTGCCATGACTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000257940.7
ENST00000546903.1
CDS TCA 72 bp TCTGCTCAGTCGCTGGTGCAGTGGAGCTCAGGGTTATaGCCTTGGCCTGATTGCGGAACTGAGCATTTTGTT +
Preference number: 6 (lower is better)
Translates to: SAQSLVQWSSGL*PWPDCGTEHFV
Trigger: AACAAAATGCTCAGTTCCGCAATCAGGCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS GCA 72 bp TGTCTGGGTGGCGATATCGGCAACGCTTGCCTCGCTTaGACACATTCCTCAAGAAGTCTCTACAGATGGCAT +
Preference number: 6 (lower is better)
Translates to: CLGGDIGNACLA*THSSRSLYRWH
Trigger: ATGCCATCTGTAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS GCA 72 bp AGTAGTACCTCATTGGTGGCCAGCAGGTTGCTGACCTaGTTCTTTAACTCCTCTACCCGCTTCCTGAGCATG +
Preference number: 6 (lower is better)
Translates to: SSTSLVASRLLT*FFNSSTRFLSM
Trigger: CATGCTCAGGAAGCGGGTAGAGGAGTTAAAGAAGCAGGTCAGCAACCTGCTGGCCACCAATGAGGTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 72 bp CTCATCCTCCTTGGAGCCATGGATGAAACGGCAATTTaGGCGGCTACACTCCTTGTTCTGGAAGTCATGGCA +
Preference number: 6 (lower is better)
Translates to: LILLGAMDETAI*AATLLVLEVMA
Trigger: TGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATCCATGGCTCCAAGGAGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CAA 72 bp ATGTCTGGGTGGCGATATCGGCAACGCTTGCCTCGCTaGCACACATTCCTCAAGAAGTCTCTACAGATGGCA +
Preference number: 6 (lower is better)
Translates to: MSGWRYRQRLPR*HTFLKKSLQMA
Trigger: TGCCATCTGTAGAGACTTCTTGAGGAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257940.7
ENST00000546903.1
ENST00000552345.1
CDS CAA 72 bp CAGCGTCTGACAGTGCATTGGGATGGCCGATTAGACTaGAAGGCAGTGATTGTGACGCTTCCCAACACCCTA +
Preference number: 6 (lower is better)
Translates to: QRLTVHWDGRLD*KAVIVTLPNTL
Trigger: TAGGGTGTTGGGAAGCGTCACAATCACTGCCTTCAAGTCTAATCGGCCATCCCAATGCACTGTCAGACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS CAA 90 bp CTACACTCCTTGTTCTGGAAGTCATGGCAGAAGATGAACTCGTTTTaGCTCACCCCCAAGTTGGACACCTCGCTCATGTCTGGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: LHSLFWKSWQKMNSF*LTPKLDTSLMSGWR
Trigger: TCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGGGTGAGCAAAAACGAGTTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257940.7
ENST00000546903.1
CDS CAA 90 bp TCAAAAAGGCAGCGTCTGACAGTGCATTGGGATGGCCGATTAGACTaGAAGGCAGTGATTGTGACGCTTCCCAACACCCTAGAGTTTGCG +
Preference number: 6 (lower is better)
Translates to: SKRQRLTVHWDGRLD*KAVIVTLPNTLEFA
Trigger: CGCAAACTCTAGGGTGTTGGGAAGCGTCACAATCACTGCCTTCAAGTCTAATCGGCCATCCCAATGCACTGTCAGACGCTGCCTTTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546903.1
ENST00000551880.1
CDS CAA 90 bp TCCTTGGAGCCATGGATGAAACGGCAATTTGGGCGGCTACACTCCTaGTTCTGGAAGTCATGGCAGAAGATGAACTCGTTTTTGCTCACC +
Preference number: 6 (lower is better)
Translates to: SLEPWMKRQFGRLHS*FWKSWQKMNSFLLT
Trigger: GGTGAGCAAAAACGAGTTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATCCATGGCTCCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS TCA 72 bp TCTTATAGCCATCCTCATCCTCCTTGGAGCCATGGATaGAACGGCAATTTGGGCGGCTACACTCCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: SYSHPHPPWSHG*NGNLGGYTPCS
Trigger: AGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATCCATGGCTCCAAGGAGGATGAGGATGGCTATAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CCA 72 bp AACCTCAAAAAGGCAGCGTCTGACAGTGCATTGGGATaGCCGATTAGACTTGAAGGCAGTGATTGTGACGCT +
Preference number: 6 (lower is better)
Translates to: NLKKAASDSALG*PIRLEGSDCDA
Trigger: AGCGTCACAATCACTGCCTTCAAGTCTAATCGGCCATCCCAATGCACTGTCAGACGCTGCCTTTTTGAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551880.1
CDS CCA 72 bp GTTCTCAAAAAGGCAGCGTCTGACAGTGCATTGGGATaGCCGATTAGACTTGAAGGCAGTGATTGTGACGCT +
Preference number: 6 (lower is better)
Translates to: VLKKAASDSALG*PIRLEGSDCDA
Trigger: AGCGTCACAATCACTGCCTTCAAGTCTAATCGGCCATCCCAATGCACTGTCAGACGCTGCCTTTTTGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546903.1
CDS CAA 72 bp GTGAGGAACCTCAAAAAGGCAGCGTCTGACAGTGCATaGGGATGGCCGATTAGACTTGAAGGCAGTGATTGT +
Preference number: 6 (lower is better)
Translates to: VRNLKKAASDSA*GWPIRLEGSDC
Trigger: ACAATCACTGCCTTCAAGTCTAATCGGCCATCCCAATGCACTGTCAGACGCTGCCTTTTTGAGGTTCCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551880.1
CDS CCA 72 bp GACTTGGGTGGAAGAAGGAGTAAGAGTGGAGGACTATaGGGTGGTTGTCACAAGAAATCTGACAAAACGGCA +
Preference number: 6 (lower is better)
Translates to: DLGGRRSKSGGL*GGCHKKSDKTA
Trigger: TGCCGTTTTGTCAGATTTCTTGTGACAACCACCCCATAGTCCTCCACTCTTACTCCTTCTTCCACCCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000551880.1
ENST00000552345.1
CDS CAA 72 bp CCATGGATGAAACGGCAATTTGGGCGGCTACACTCCTaGTTCTGGAAGTCATGGCAGAAGATGAACTCGTTT +
Preference number: 6 (lower is better)
Translates to: PWMKRQFGRLHS*FWKSWQKMNSF
Trigger: AAACGAGTTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CAA 90 bp ATTTCCTCAGGGTTCAAACTGAACTTCACCTGTCCAAGGGAGAAGTaGCCAGTAAGAAGAGTAAAACTAATTCGGAGGGACTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: ISSGFKLNFTCPREK*PVRRVKLIRRDWEE
Trigger: CTCCTCCCAGTCCCTCCGAATTAGTTTTACTCTTCTTACTGGCAACTTCTCCCTTGGACAGGTGAAGTTCAGTTTGAACCCTGAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551880.1
CDS GCA 72 bp CTTTTAGTAAAGGGGAATGACCAGGTGAAGTACAAATaGCATCTATCCAAGCCTGGCTCACGTTGCAAGTCG +
Preference number: 6 (lower is better)
Translates to: LLVKGNDQVKYK*HLSKPGSRCKS
Trigger: CGACTTGCAACGTGAGCCAGGCTTGGATAGATGGCATTTGTACTTCACCTGGTCATTCCCCTTTACTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549973.1
CDS CCA 72 bp ATGAAACGGCAATTTGGGCGGCTACACTCCTTGTTCTaGAAGTCATGGCAGAAGATGAACTCGTTTTTGCTC +
Preference number: 6 (lower is better)
Translates to: MKRQFGRLHSLF*KSWQKMNSFLL
Trigger: GAGCAAAAACGAGTTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257940.7
CDS CAA 72 bp GGGTTCAAACTGAACTTCACCTGTCCAAGGGAGAAGTaGCCAGTAAGAAGAGTAAAACTAATTCGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: GFKLNFTCPREK*PVRRVKLIRRD
Trigger: GTCCCTCCGAATTAGTTTTACTCTTCTTACTGGCAACTTCTCCCTTGGACAGGTGAAGTTCAGTTTGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551880.1
CDS CAA 90 bp TTCATATTGTTCCCTTTGAGAATAAGGGAATCTTTCCTAATTCCTTaGGCCTTGACCTACCCCCACCCCACTACTGTGACTTTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: FILFPLRIRESFLIP*ALTYPHPTTVTLPS
Trigger: TGAAGGCAAAGTCACAGTAGTGGGGTGGGGGTAGGTCAAGGCCAAAGGAATTAGGAAAGATTCCCTTATTCTCAAAGGGAACAATATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549973.1
CDS GCA 72 bp AAGTACAAATGCCATCTATCCAAGCCTGGCTCACGTTaGAAGTCGCACCAGCAGCAGATAATTAGTTATGAT +
Preference number: 6 (lower is better)
Translates to: KYKCHLSKPGSR*KSHQQQIISYD
Trigger: ATCATAACTAATTATCTGCTGCTGGTGCGACTTGCAACGTGAGCCAGGCTTGGATAGATGGCATTTGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549973.1